Index

Locus IDSeq. IDLocationCustom annotationWindow IDLocationStrandNLengthMean pairwise IDzSCIP
1pao_1629,897 – 629,978-
-
-
-
-
-
-
- 		1629,897 – 629,978+ 38190.95 -5.770.890.882116
2629,897 – 629,978- 38190.95 -4.890.790.876729
2pao_1630,406 – 630,515"tRNA.2:tRNA-Met:pao_1:630434-630510"
"tRNAscan=type:Met:anticodon:CAT
f:630436_t:630539_strand=-_cove=81.87"
"Rfam=AE016775.1/164029-163956_RF00005;tRNA;|1e-33"
-
-
-
-
- 		3630,406 – 630,515+ 611090.55 -3.070.950.999828
4630,406 – 630,515- 611090.55 -4.140.980.999973
3pao_1648,796 – 648,864-
-
-
-
-
-
-
- 		5648,796 – 648,864- 66971.06 -1.190.740.933202
4pao_1707,568 – 707,640-
-
-
-
-
-
-
- 		6707,568 – 707,640+ 67291.11 -1.350.910.810687
5pao_1722,050 – 722,165-
-
"Rfam=AY661976.1/19-539_RF00177;SSU_rRNA_5;|1e-18"
-
-
-
-
- 		7722,050 – 722,165+ 611794.78 -2.240.940.999411
8722,050 – 722,165- 611794.78 -1.250.980.979333
6pao_1722,190 – 722,510"rRNA.1:16S_ribosomal_RNA:pao_1:722096-723631"
-
"Rfam=U70698.1/19-422_RF00177;SSU_rRNA_5;|6e-180"
-
-
-
-
- 		9722,190 – 722,310+ 412093.75 -1.380.940.597940
10722,270 – 722,390+ 412093.75 -2.390.920.982702
11722,310 – 722,430+ 412097.92 -1.541.010.564203
12722,390 – 722,510+ 4120100.00 -2.250.950.696080
7pao_1722,630 – 722,870"rRNA.1:16S_ribosomal_RNA:pao_1:722096-723631"
-
"Rfam=X97595.1/20-506_RF00177;SSU_rRNA_5;|6e-22"
-
-
-
-
- 		13722,630 – 722,750+ 412095.42 -1.701.020.891299
14722,710 – 722,830+ 412097.92 -2.510.970.952468
15722,750 – 722,870+ 4120100.00 -2.751.000.897367
8pao_1722,910 – 723,030"rRNA.1:16S_ribosomal_RNA:pao_1:722096-723631"
-
"Rfam=AB074961.1/485-889_RF00177;SSU_rRNA_5;|3e-28"
-
-
-
-
- 		16722,910 – 723,030+ 412097.50 -1.770.970.764836
9pao_1723,190 – 723,429"rRNA.1:16S_ribosomal_RNA:pao_1:722096-723631"
-
"Rfam=Z93958.1/21-476_RF00177;SSU_rRNA_5;|1e-41"
-
-
-
-
- 		17723,190 – 723,309+ 412097.92 -1.581.000.594009
18723,269 – 723,389+ 412097.92 -2.250.980.930848
19723,309 – 723,429+ 412098.33 -2.620.990.957513
10pao_1723,469 – 723,682"rRNA.1:16S_ribosomal_RNA:pao_1:722096-723631"
-
"Rfam=Z93981.1/19-411_RF00177;SSU_rRNA_5;|1e-22"
-
-
-
-
- 		20723,469 – 723,589+ 412096.94 -2.110.960.927191
21723,509 – 723,629+ 412096.94 -4.370.970.958198
22723,549 – 723,669+ 412095.83 -1.790.940.845641
23723,562 – 723,682+ 412096.24 -3.070.990.993108
11pao_1723,693 – 723,776"tRNA.3:tRNA-Ile:pao_1:723696-723772"
"tRNAscan=type:Ile:anticodon:GAT
f:723695_t:723770_strand=+_cove=83.35"
"Rfam=AY342207.1/84-157_RF00005;tRNA;|4e-36"
-
-
-
-
- 		24723,693 – 723,776+ 68394.83 -2.910.960.999968
25723,693 – 723,776- 68394.83 -4.030.970.999992
12pao_1723,797 – 723,877"tRNA.4:tRNA-Ala:pao_1:723801-723876"
"tRNAscan=type:Ala:anticodon:TGC
f:723800_t:723875_strand=+_cove=72.95"
"Rfam=AE004883.1/3583-3511_RF00005;tRNA;|1e-35"
-
-
-
-
- 		26723,797 – 723,877+ 68095.42 -0.911.020.946276
13pao_1724,128 – 724,328"rRNA.2:23S_ribosomal_RNA:pao_1:724103-726993"
-
"Rfam=AY172151.1/984-1117_RF00002;5_8S_rRNA;|2e-24"
-
-
-
-
- 		27724,128 – 724,248+ 612094.28 -1.190.960.939725
28724,168 – 724,288+ 612091.33 -2.711.070.999996
29724,208 – 724,328+ 612092.78 -3.511.070.999999
30724,208 – 724,328- 612092.78 -1.840.950.995648
14pao_1724,647 – 724,886"rRNA.2:23S_ribosomal_RNA:pao_1:724103-726993"
-
-
-
-
-
-
- 		31724,647 – 724,766+ 612097.21 -1.491.000.997320
32724,687 – 724,806+ 612096.98 -1.770.940.994773
33724,766 – 724,886+ 612097.44 -1.560.970.996183
15pao_1724,926 – 726,044"rRNA.2:23S_ribosomal_RNA:pao_1:724103-726993"
-
-
-
-
-
-
- 		34724,926 – 725,046+ 612098.89 -0.661.010.727199
35725,006 – 725,126+ 612098.17 -2.110.970.999573
36725,046 – 725,166+ 612098.72 -1.710.970.997594
37725,046 – 725,166- 612098.72 -0.880.970.786012
38725,086 – 725,206+ 612098.72 -0.760.990.742036
39725,126 – 725,246+ 612099.28 -0.651.000.640630
40725,206 – 725,324+ 612094.55 -1.290.970.978707
41725,246 – 725,364+ 612095.27 -1.870.970.998938
42725,284 – 725,404+ 612097.94 -1.161.010.984516
43725,324 – 725,444+ 612097.39 -1.120.980.963157
44725,324 – 725,444- 612097.39 -2.801.020.999994
45725,364 – 725,484+ 612097.11 -2.800.950.999927
46725,364 – 725,484- 612097.11 -2.891.010.999994
47725,404 – 725,524+ 612097.94 -1.550.960.992816
48725,404 – 725,524- 612097.94 -1.500.920.952660
49725,444 – 725,564+ 612096.94 -1.691.000.999157
50725,484 – 725,604+ 612094.50 -1.441.000.996900
51725,524 – 725,644+ 612090.49 -2.701.070.999994
52725,524 – 725,644- 612090.49 -1.550.910.899793
53725,564 – 725,684+ 612091.49 -1.571.080.999638
54725,684 – 725,804- 612098.33 -0.770.970.670536
55725,724 – 725,844+ 612095.06 -1.940.960.999104
56725,764 – 725,884+ 612095.06 -2.320.980.999929
57725,804 – 725,924+ 612095.06 -0.760.960.554262
58725,844 – 725,964+ 612098.50 -0.940.980.879271
59725,884 – 726,004+ 612098.50 -1.480.980.993556
60725,924 – 726,044+ 612098.50 -1.430.980.990954
16pao_1726,164 – 726,284"rRNA.2:23S_ribosomal_RNA:pao_1:724103-726993"
-
-
-
-
-
-
- 		61726,164 – 726,284+ 612094.50 -0.611.000.567275
17pao_1726,324 – 726,884"rRNA.2:23S_ribosomal_RNA:pao_1:724103-726993"
-
"Rfam=AF110138.1/3174-3607_RF00028;Intron_gpI;|2e-18"
-
-
-
-
- 		62726,324 – 726,444+ 612099.00 -1.941.000.999649
63726,324 – 726,444- 612099.00 -1.680.970.997041
64726,364 – 726,484+ 612099.28 -2.001.000.999663
65726,404 – 726,524+ 612099.28 -2.260.980.999744
66726,444 – 726,564+ 612099.56 -1.001.000.933608
67726,524 – 726,644+ 6120100.00 -1.351.000.989716
68726,564 – 726,684+ 6120100.00 -1.341.000.989213
69726,604 – 726,724+ 6120100.00 -2.110.940.997234
70726,604 – 726,724- 6120100.00 -1.701.000.998308
71726,724 – 726,844+ 612099.11 -1.350.990.988496
72726,764 – 726,884+ 612098.39 -1.300.980.981972
18pao_1727,133 – 727,253"rRNA.3:5S_ribosomal_RNA:pao_1:727136-727255"
-
"Rfam=X05517.1/3-118_RF00001;5S_rRNA;|7e-54"
-
-
-
-
- 		73727,133 – 727,253- 612096.78 -1.370.960.981402
19pao_1797,721 – 797,805"tRNA.5:tRNA-Gly:pao_1:797721-797794"
"tRNAscan=type:Gly:anticodon:CCC
f:797723_t:797795_strand=-_cove=56.16"
"Rfam=L02105.1/885-955_RF00005;tRNA;|3e-27"
-
-
-
-
- 		74797,721 – 797,805+ 38493.65 -2.730.970.986987
75797,721 – 797,805- 38493.65 -3.270.990.995874
20pao_1901,520 – 901,632"misc_RNA.2:tmRNA:pao_1:901520-901872"
-
"Rfam=AE004517.1/7001-6652_RF00023;tmRNA;|2e-57"
"Noncode=n432,u402,AE004517,ssrA,Pseudomonas_aeruginosa_PAO1|2e-59"
"tmRNA-db=Psmon_aerug_0322|2e-60"
-
-
"Rnomics=phrH(tmRNA)|2e-62" 		76901,520 – 901,632+ 611291.49 -1.990.820.607429
21pao_1991,217 – 991,335"tRNA.6:tRNA-Ser:pao_1:991260-991350"
-
"Rfam=AE016862.1/122146-122233_RF00005;tRNA;|9e-35"
-
-
-
-
- 		77991,217 – 991,335- 611882.77 -2.660.850.948443
22pao_11,060,354 – 1,060,434"tRNA.10:tRNA-Lys:pao_1:1060356-1060431"
"tRNAscan=type:Lys:anticodon:TTT
f:1060355_t:1060428_strand=+_cove=85.14"
"Rfam=AE016778.1/198055-198127_RF00005;tRNA;|3e-33"
-
-
-
-
- 		781,060,354 – 1,060,434+ 68097.16 -4.060.980.999991
791,060,354 – 1,060,434- 68097.16 -3.731.000.999995
23pao_11,062,370 – 1,062,440-
-
-
-
-
"ncRNAdb=MmuscAK150073_unclassifiable|1e-08"
-
- 		801,062,370 – 1,062,440+ 47086.87 -3.170.770.987069
811,062,370 – 1,062,440- 47086.87 -3.120.890.997219
24pao_11,096,867 – 1,096,958"tRNA.11:tRNA-Ser:pao_1:1096867-1096956"
"tRNAscan=type:Pseudo:anticodon:CGA
f:1096867_t:1096952_strand=+_cove=40.39"
"Rfam=AE004534.1/78-164_RF00005;tRNA;|3e-43"
-
-
-
-
- 		821,096,867 – 1,096,958+ 69190.92 -3.580.960.999947
831,096,867 – 1,096,958- 69190.92 -2.610.980.999871
25pao_11,668,934 – 1,669,051"rRNA.4:4.5S_ribosomal_RNA:pao_1:1668840-1669799"
-
"Rfam=M31829.1/126-225_RF00169;SRP_bact;|2e-51"
"Noncode=n5479,u4793,X14404,4.5S,Pseudomonas_aeruginosa|1e-60"
-
-
-
-
"Gonzales=888"
841,668,934 – 1,669,051+ 611784.49 -2.870.770.865755
26pao_11,928,650 – 1,928,721-
-
-
-
-
-
"Livny=P11|5e-09"
- 		851,928,650 – 1,928,721+ 37491.78 -3.490.770.865764
861,928,650 – 1,928,721- 37491.78 -5.340.880.906237
27pao_11,947,318 – 1,947,400"tRNA.12:tRNA-Arg:pao_1:1947320-1947396"
"tRNAscan=type:Arg:anticodon:TCT
f:1947319_t:1947393_strand=+_cove=83.33"
"Rfam=AE016782.1/171160-171233_RF00005;tRNA;|4e-36"
-
-
-
-
- 		871,947,318 – 1,947,400+ 68296.53 -2.040.910.993874
881,947,318 – 1,947,400- 68296.53 -1.590.940.985140
28pao_11,947,442 – 1,947,529"tRNA.13:tRNA-His:pao_1:1947448-1947523"
"tRNAscan=type:His:anticodon:GTG
f:1947447_t:1947524_strand=+_cove=69.68"
"Rfam=AE016869.1/150588-150516_RF00005;tRNA;|1e-23"
-
-
-
-
- 		891,947,442 – 1,947,529+ 68792.02 -2.180.970.999597
901,947,442 – 1,947,529- 68792.02 -2.700.980.999955
29pao_11,947,578 – 1,947,663"tRNA.14:tRNA-Leu:pao_1:1947578-1947662"
"tRNAscan=type:Pseudo:anticodon:TAG
f:1947578_t:1947658_strand=+_cove=37.54"
"Rfam=AE016919.1/125120-125201_RF00005;tRNA;|9e-28"
-
-
-
-
- 		911,947,578 – 1,947,663+ 68594.75 -2.311.020.999982
921,947,578 – 1,947,663- 68594.75 -2.090.980.999784
30pao_11,947,724 – 1,947,810"tRNA.15:tRNA-His:pao_1:1947729-1947804"
"tRNAscan=type:His:anticodon:GTG
f:1947728_t:1947804_strand=+_cove=69.68"
"Rfam=AE016869.1/150588-150516_RF00005;tRNA;|1e-23"
-
-
-
-
- 		931,947,724 – 1,947,810+ 68692.40 -2.630.960.999884
941,947,724 – 1,947,810- 68692.40 -3.010.990.999984
31pao_12,118,520 – 2,118,585-
-
-
-
-
-
-
- 		952,118,520 – 2,118,585+ 46588.43 -3.380.840.994235
962,118,520 – 2,118,585- 46588.43 -3.350.850.994515
32pao_12,905,965 – 2,906,053"tRNA.17:tRNA-Leu:pao_1:2905965-2906051"
"tRNAscan=type:Leu:anticodon:TAA
f:2905968_t:2906054_strand=-_cove=64.29"
"Rfam=AF229814.1/658-741_RF00005;tRNA;|4e-42"
-
-
-
-
- 		972,905,965 – 2,906,053+ 38889.39 -1.770.940.863292
982,905,965 – 2,906,053- 38889.39 -2.791.050.998911
33pao_12,923,218 – 2,923,326"tRNA.19:tRNA-Gly:pao_1:2923222-2923297"
"tRNAscan=type:Gly:anticodon:GCC
f:2923225_t:2923304_strand=-_cove=71.11"
"Rfam=AE008904.1/10704-10776_RF00005;tRNA;|2e-35"
-
-
-
-
- 		992,923,218 – 2,923,326+ 610883.10 -1.390.900.639618
1002,923,218 – 2,923,326- 610883.10 -1.620.950.864507
34pao_13,099,308 – 3,099,387"tRNA.21:tRNA-Pro:pao_1:3099306-3099382"
"tRNAscan=type:Pro:anticodon:GGG
f:3099309_t:3099383_strand=-_cove=55.99"
"Rfam=AE004702.1/847-774_RF00005;tRNA;|3e-36"
-
-
-
-
- 		1013,099,308 – 3,099,387+ 67996.88 -1.741.010.999562
1023,099,308 – 3,099,387- 67996.88 -1.921.000.999791
35pao_13,106,753 – 3,106,814-
-
-
-
-
-
-
- 		1033,106,753 – 3,106,814+ 66198.25 -1.980.880.963707
36pao_13,133,430 – 3,133,531"tRNA.22:tRNA-Val:pao_1:3133449-3133525"
"tRNAscan=type:Val:anticodon:GAC
f:3133452_t:3133547_strand=-_cove=73.47"
"Rfam=AL646065.1/80085-80158_RF00005;tRNA;|2e-26"
-
-
-
-
- 		1043,133,430 – 3,133,531+ 610183.88 -1.650.950.882741
1053,133,430 – 3,133,531- 610183.88 -1.790.870.803571
37pao_13,173,755 – 3,173,916"tRNA.24:tRNA-Gly:pao_1:3173759-3173834"
"tRNAscan=type:Gly:anticodon:GCC
f:3173762_t:3173841_strand=-_cove=71.11"
"Rfam=AE008904.1/10704-10776_RF00005;tRNA;|3e-35"
-
-
-
-
- 		1063,173,755 – 3,173,873+ 612096.14 -1.410.980.993997
1073,173,755 – 3,173,873- 612096.14 -1.221.000.988917
1083,173,795 – 3,173,913+ 612098.72 -1.310.990.987995
1093,173,796 – 3,173,914+ 612098.72 -1.140.990.967020
1103,173,838 – 3,173,916+ 67898.88 -3.010.970.999959
1113,173,838 – 3,173,916- 67898.88 -3.040.950.999932
38pao_13,206,409 – 3,206,499"tRNA.26:tRNA-Ser:pao_1:3206408-3206497"
"tRNAscan=type:Ser:anticodon:GGA
f:3206409_t:3206494_strand=+_cove=42.13"
"Rfam=AF454951.1/50026-49940_RF00005;tRNA;|9e-28"
-
-
-
-
- 		1123,206,409 – 3,206,499+ 69091.70 -3.200.990.999987
1133,206,409 – 3,206,499- 69091.70 -1.850.990.998763
39pao_13,312,563 – 3,312,622-
-
-
-
-
-
-
- 		1143,312,563 – 3,312,622+ 65982.81 -3.440.650.898570
40pao_13,318,803 – 3,318,861-
-
-
-
-
-
"Livny=P16|7e-11"
-
"Gonzales=1698"
1153,318,803 – 3,318,861+ 65888.68 -1.080.990.770098
1163,318,803 – 3,318,861- 65888.68 -1.270.950.803033
41pao_13,395,191 – 3,395,313"tRNA.27:tRNA-Pro:pao_1:3395190-3395266"
"tRNAscan=type:Pro:anticodon:CGG
f:3395191_t:3395262_strand=+_cove=61.59"
"Rfam=AF053982.1/1346-1420_RF00005;tRNA;|3e-31"
-
-
-
-
- 		1173,395,191 – 3,395,308+ 312091.60 -2.100.940.917750
1183,395,191 – 3,395,308- 312091.60 -1.670.950.773919
1193,395,196 – 3,395,313+ 312091.60 -2.160.910.872593
1203,395,196 – 3,395,313- 312091.60 -1.950.940.865542
42pao_13,475,456 – 3,475,542"tRNA.28:tRNA-Asp:pao_1:3475457-3475533"
"tRNAscan=type:Asp:anticodon:GTC
f:3475460_t:3475537_strand=-_cove=82.46"
"Rfam=AE014100.1/9466-9539_RF00005;tRNA;|1e-29"
"Noncode=n1954,u1846,AF443995,rnpB,Methanobacterium_formicicum|1e-19"
-
-
-
- 		1213,475,456 – 3,475,542+ 68696.10 -2.571.010.999988
1223,475,456 – 3,475,542- 68696.10 -2.091.010.999926
43pao_13,475,728 – 3,475,843"tRNA.30:tRNA-Val:pao_1:3475741-3475816"
"tRNAscan=type:Val:anticodon:TAC
f:3475744_t:3475832_strand=-_cove=70.72"
"Rfam=AE017280.1/34838-34766_RF00005;tRNA;|3e-25"
-
-
-
-
- 		1233,475,728 – 3,475,843+ 612082.02 -1.530.740.645937
1243,475,742 – 3,475,820+ 67894.85 -1.930.960.998825
1253,475,742 – 3,475,820- 67894.85 -2.170.980.999848
44pao_13,514,705 – 3,514,801"tRNA.31:tRNA-Glu:pao_1:3514723-3514798"
"tRNAscan=type:Glu:anticodon:TTC
f:3514726_t:3514819_strand=-_cove=61.69"
"Rfam=U55299.1/85-158_RF00005;tRNA;|6e-26"
-
-
-
-
- 		1263,514,705 – 3,514,801+ 69693.43 -2.310.900.994318
1273,514,705 – 3,514,801- 69693.43 -2.000.900.985884
45pao_13,514,845 – 3,514,923"tRNA.32:tRNA-Ala:pao_1:3514845-3514920"
"tRNAscan=type:Ala:anticodon:GGC
f:3514848_t:3514923_strand=-_cove=67.94"
"Rfam=AE016835.1/214862-214934_RF00005;tRNA;|5e-26"
-
-
-
-
- 		1283,514,845 – 3,514,923- 67890.26 -0.901.050.884533
46pao_13,515,014 – 3,515,100"tRNA.33:tRNA-Glu:pao_1:3515014-3515089"
"tRNAscan=type:Glu:anticodon:TTC
f:3515017_t:3515092_strand=-_cove=61.69"
"Rfam=U55299.1/85-158_RF00005;tRNA;|1e-26"
-
-
-
-
- 		1293,515,014 – 3,515,100+ 68791.88 -2.840.960.999890
1303,515,014 – 3,515,100- 68791.88 -2.610.950.999754
47pao_13,515,135 – 3,515,215"tRNA.34:tRNA-Ala:pao_1:3515138-3515213"
"tRNAscan=type:Ala:anticodon:GGC
f:3515141_t:3515219_strand=-_cove=67.94"
"Rfam=AE016835.1/214862-214934_RF00005;tRNA;|5e-26"
-
-
-
-
- 		1313,515,135 – 3,515,215+ 68092.23 -2.121.000.999858
1323,515,135 – 3,515,215- 68092.23 -1.641.040.999569
48pao_13,524,011 – 3,524,090"tRNA.35:tRNA-Asn:pao_1:3524012-3524087"
"tRNAscan=type:Asn:anticodon:GTT
f:3524012_t:3524085_strand=+_cove=82.03"
"Rfam=AE004738.1/1390-1462_RF00005;tRNA;|1e-35"
-
-
-
-
- 		1333,524,011 – 3,524,090+ 67993.14 -2.531.030.999990
1343,524,011 – 3,524,090- 67993.14 -2.410.970.999888
49pao_13,650,816 – 3,650,894"tRNA.37:tRNA-Val:pao_1:3650815-3650890"
"tRNAscan=type:Val:anticodon:TAC
f:3650818_t:3650892_strand=-_cove=70.72"
"Rfam=AE017280.1/34838-34766_RF00005;tRNA;|2e-25"
-
-
-
-
- 		1353,650,816 – 3,650,894+ 67894.85 -1.930.960.998825
1363,650,816 – 3,650,894- 67894.85 -2.170.980.999848
50pao_14,536,674 – 4,536,748-
-
"Rfam=AE004822.1/2219-2057_RF00050;RFN;|5e-35"
-
-
-
-
-
"Gonzales=2315"
1374,536,674 – 4,536,748+ 57494.04 -1.370.910.893087
51pao_14,536,766 – 4,536,839-
-
"Rfam=AE004822.1/2219-2057_RF00050;RFN;|1e-35"
-
-
-
-
-
"Gonzales=2315"
1384,536,766 – 4,536,839+ 57393.29 -1.681.020.997908
1394,536,766 – 4,536,839- 57393.29 -1.591.040.996646
52pao_14,756,857 – 4,756,961-
-
-
-
-
-
-
- 		1404,756,857 – 4,756,961+ 610789.59 -3.690.830.991240
1414,756,857 – 4,756,961- 610789.59 -3.260.820.968118
53pao_14,767,261 – 4,767,331-
-
-
-
-
-
-
- 		1424,767,261 – 4,767,331+ 67097.71 -0.770.960.565287
1434,767,261 – 4,767,331- 67097.71 -0.981.000.942285
54pao_14,780,759 – 4,780,835-
-
-
-
-
-
"Livny=P26|2e-14"
- 		1444,780,759 – 4,780,835+ 67682.59 -3.280.920.988671
1454,780,759 – 4,780,835- 67682.59 -4.350.920.988602
55pao_14,781,793 – 4,781,948-
-
-
-
-
-
-
- 		1464,781,793 – 4,781,913+ 612090.08 -1.800.820.517912
1474,781,793 – 4,781,913- 612090.08 -2.760.840.965326
1484,781,828 – 4,781,948- 612093.65 -2.660.930.999696
56pao_14,783,114 – 4,783,211-
-
-
-
-
-
-
- 		1494,783,114 – 4,783,211+ 610082.31 -1.820.640.581757
1504,783,114 – 4,783,211- 610082.31 -1.930.810.825651
57pao_14,784,181 – 4,784,296"tRNA.40:tRNA-Trp:pao_1:4784184-4784259"
"tRNAscan=type:Trp:anticodon:CCA
f:4784187_t:4784265_strand=-_cove=69.19"
"Rfam=AE016858.1/27335-27407_RF00005;tRNA;|8e-26"
-
-
-
-
- 		1514,784,181 – 4,784,296+ 611788.90 -2.690.770.609353
1524,784,181 – 4,784,296- 611788.90 -2.870.860.979513
58pao_14,785,556 – 4,785,677"tRNA.41:tRNA-Thr:pao_1:4785593-4785668"
"tRNAscan=type:Thr:anticodon:GGT
f:4785596_t:4785708_strand=-_cove=75.20"
"Rfam=AE016858.1/27094-27166_RF00005;tRNA;|3e-28"
-
-
-
-
- 		1534,785,556 – 4,785,676+ 612093.52 -5.960.990.999729
1544,785,556 – 4,785,676- 612093.52 -5.541.010.999912
1554,785,557 – 4,785,677+ 612093.52 -5.820.990.999810
1564,785,557 – 4,785,677- 612093.52 -5.201.010.999965
59pao_14,785,689 – 4,785,808"tRNA.42:tRNA-Gly:pao_1:4785688-4785761"
"tRNAscan=type:Gly:anticodon:TCC
f:4785691_t:4785763_strand=-_cove=74.75"
"Rfam=U38804.1/26648-26578_RF00005;tRNA;|1e-24"
-
-
-
-
- 		1574,785,689 – 4,785,808+ 612093.22 -1.480.880.765140
1584,785,689 – 4,785,808- 612093.22 -1.080.950.841875
60pao_14,788,578 – 4,788,698"rRNA.5:5S_ribosomal_RNA:pao_1:4788574-4788693"
-
"Rfam=X05517.1/3-118_RF00001;5S_rRNA;|1e-52"
-
-
-
-
- 		1594,788,578 – 4,788,698+ 612096.17 -1.270.950.955677
61pao_14,788,978 – 4,789,656"rRNA.6:23S_ribosomal_RNA:pao_1:4788836-4791724"
-
"Rfam=AF110138.1/3174-3607_RF00028;Intron_gpI;|2e-18"
-
-
-
-
- 		1604,788,978 – 4,789,097- 612098.83 -1.340.960.973568
1614,789,097 – 4,789,216+ 612099.72 -1.330.950.952175
1624,789,136 – 4,789,256- 6120100.00 -1.561.000.996553
1634,789,176 – 4,789,296- 6120100.00 -1.781.000.998874
1644,789,256 – 4,789,376- 6120100.00 -0.861.000.845431
1654,789,296 – 4,789,416- 612099.56 -0.781.000.779345
1664,789,336 – 4,789,456- 612099.28 -1.451.000.994912
1674,789,376 – 4,789,496+ 612098.83 -1.021.000.945799
1684,789,376 – 4,789,496- 612098.83 -1.900.990.999338
1694,789,416 – 4,789,536+ 612098.72 -1.000.990.922101
1704,789,416 – 4,789,536- 612098.72 -0.910.970.780387
1714,789,456 – 4,789,576+ 612097.72 -1.580.940.982151
1724,789,496 – 4,789,616- 612095.11 -1.661.010.999334
1734,789,536 – 4,789,656- 612094.50 -1.601.010.999041
62pao_14,789,776 – 4,790,136"rRNA.6:23S_ribosomal_RNA:pao_1:4788836-4791724"
-
-
-
-
-
-
- 		1744,789,776 – 4,789,896- 612098.50 -0.751.000.785287
1754,789,816 – 4,789,936- 612098.50 -2.311.000.999933
1764,789,856 – 4,789,976- 612098.50 -0.830.980.795175
1774,789,936 – 4,790,056- 612095.06 -0.991.000.942909
1784,789,976 – 4,790,096- 612095.06 -1.841.000.999673
1794,790,016 – 4,790,136+ 612098.00 -2.350.990.999920
1804,790,016 – 4,790,136- 612098.00 -1.860.950.997849
63pao_14,790,176 – 4,790,814"rRNA.6:23S_ribosomal_RNA:pao_1:4788836-4791724"
-
-
-
-
-
-
- 		1814,790,176 – 4,790,296+ 612090.49 -1.400.890.706745
1824,790,176 – 4,790,296- 612090.49 -2.641.070.999993
1834,790,216 – 4,790,336- 612094.50 -1.311.030.997274
1844,790,256 – 4,790,376- 612096.67 -1.921.010.999868
1854,790,296 – 4,790,416- 612097.67 -1.020.990.938093
1864,790,336 – 4,790,456+ 612098.00 -2.420.920.998739
1874,790,336 – 4,790,456- 612098.00 -1.930.930.995542
1884,790,376 – 4,790,496+ 612097.39 -2.491.010.999981
1894,790,376 – 4,790,496- 612097.39 -1.201.010.990756
1904,790,416 – 4,790,536+ 612097.94 -0.721.030.869620
1914,790,416 – 4,790,536- 612097.94 -0.681.000.715637
1924,790,456 – 4,790,574- 612094.60 -2.020.940.998305
1934,790,496 – 4,790,614- 612094.55 -1.510.970.993578
1944,790,536 – 4,790,654- 612094.55 -0.760.970.573654
1954,790,614 – 4,790,734+ 612099.00 -0.930.980.838187
1964,790,614 – 4,790,734- 612099.00 -1.240.970.958357
1974,790,654 – 4,790,774+ 612098.72 -1.310.980.985799
1984,790,654 – 4,790,774- 612098.72 -1.070.980.937297
1994,790,694 – 4,790,814- 612098.44 -1.270.970.976184
64pao_14,790,934 – 4,791,212"rRNA.6:23S_ribosomal_RNA:pao_1:4788836-4791724"
-
-
-
-
-
-
- 		2004,790,934 – 4,791,054- 612097.44 -1.320.970.984695
2014,790,974 – 4,791,093- 612096.31 -1.180.950.925977
2024,791,014 – 4,791,133- 612096.87 -1.720.960.997253
2034,791,054 – 4,791,173- 612097.21 -1.861.000.999644
2044,791,093 – 4,791,212- 612096.11 -0.851.000.888144
65pao_14,791,332 – 4,791,452"rRNA.6:23S_ribosomal_RNA:pao_1:4788836-4791724"
-
-
-
-
-
-
- 		2054,791,332 – 4,791,452- 612089.06 -1.271.070.990727
66pao_14,791,492 – 4,791,772"rRNA.6:23S_ribosomal_RNA:pao_1:4788836-4791724"
-
"Rfam=AY172151.1/984-1117_RF00002;5_8S_rRNA;|3e-27"
-
-
-
-
- 		2064,791,492 – 4,791,612+ 612093.67 -1.010.920.569769
2074,791,492 – 4,791,612- 612093.67 -3.171.080.999999
2084,791,532 – 4,791,652- 612091.83 -3.221.050.999998
2094,791,572 – 4,791,692- 612093.39 -1.761.030.999756
2104,791,652 – 4,791,772+ 612098.67 -0.870.960.669694
67pao_14,791,952 – 4,792,032"tRNA.44:tRNA-Ala:pao_1:4791951-4792026"
"tRNAscan=type:Ala:anticodon:TGC
f:4791954_t:4792028_strand=-_cove=72.95"
"Rfam=AE004883.1/3583-3511_RF00005;tRNA;|1e-35"
-
-
-
-
- 		2114,791,952 – 4,792,032- 68095.42 -0.911.020.946276
68pao_14,792,053 – 4,792,136"tRNA.45:tRNA-Ile:pao_1:4792055-4792131"
"tRNAscan=type:Ile:anticodon:GAT
f:4792058_t:4792136_strand=-_cove=83.35"
"Rfam=AY342207.1/84-157_RF00005;tRNA;|4e-36"
-
-
-
-
- 		2124,792,053 – 4,792,136+ 68394.83 -4.030.970.999992
2134,792,053 – 4,792,136- 68394.83 -2.910.960.999968
69pao_14,792,147 – 4,792,746"rRNA.7:16S_ribosomal_RNA:pao_1:4792196-4793731"
-
"Rfam=Z93981.1/19-411_RF00177;SSU_rRNA_5;|9e-48"
-
-
-
-
- 		2144,792,147 – 4,792,267+ 612094.61 -1.340.920.910369
2154,792,147 – 4,792,267- 612094.61 -3.150.940.999941
2164,792,187 – 4,792,307- 612096.94 -3.400.980.999993
2174,792,227 – 4,792,347- 612097.83 -0.841.000.881922
2184,792,307 – 4,792,427- 612098.61 -0.690.990.653891
2194,792,387 – 4,792,507- 612098.56 -2.240.990.999879
2204,792,427 – 4,792,547- 612098.28 -1.460.990.994718
2214,792,467 – 4,792,587+ 612099.22 -0.890.980.804513
2224,792,467 – 4,792,587- 612099.22 -1.010.990.934093
2234,792,507 – 4,792,626- 612098.44 -1.420.970.989872
2244,792,547 – 4,792,666+ 612098.72 -1.110.980.952039
2254,792,626 – 4,792,746- 612095.28 -0.841.050.963733
70pao_14,792,826 – 4,793,639"rRNA.7:16S_ribosomal_RNA:pao_1:4792196-4793731"
-
"Rfam=AJ295331.1/19-544_RF00177;SSU_rRNA_5;|0.0"
-
-
-
-
- 		2264,792,826 – 4,792,946- 612097.00 -2.701.030.999994
2274,792,866 – 4,792,986+ 612097.28 -1.491.010.998270
2284,792,866 – 4,792,986- 612097.28 -0.961.010.948322
2294,792,946 – 4,793,066+ 6120100.00 -1.101.000.955862
2304,792,946 – 4,793,066- 6120100.00 -1.621.000.997483
2314,792,986 – 4,793,106- 612097.06 -3.300.960.999983
2324,793,026 – 4,793,146- 612096.00 -1.670.940.989946
2334,793,066 – 4,793,186- 612095.00 -1.141.030.991884
2344,793,186 – 4,793,306- 612093.50 -1.451.080.999606
2354,793,226 – 4,793,346- 612094.33 -1.991.060.999978
2364,793,306 – 4,793,426+ 6120100.00 -1.071.000.947125
2374,793,306 – 4,793,426- 6120100.00 -1.611.000.997432
2384,793,346 – 4,793,466- 6120100.00 -1.871.000.999250
2394,793,386 – 4,793,506- 612098.67 -2.551.010.999977
2404,793,426 – 4,793,546+ 612095.72 -0.910.940.589724
2414,793,426 – 4,793,546- 612095.72 -2.101.030.999968
2424,793,466 – 4,793,586- 612092.00 -2.591.050.999993
2434,793,506 – 4,793,626- 612092.56 -1.571.010.998390
2444,793,519 – 4,793,639- 612092.83 -1.731.040.999735
71pao_14,793,664 – 4,793,780-
-
"Rfam=AJ005875.1/16-465_RF00177;SSU_rRNA_5;|2e-17"
-
-
-
-
- 		2454,793,664 – 4,793,780- 511896.77 -1.860.960.996634
72pao_14,939,194 – 4,939,277-
-
-
-
-
-
-
- 		2464,939,194 – 4,939,277- 68383.78 -4.310.670.943307
73pao_14,956,426 – 4,956,655-
-
"Rfam=AE004857.1/302-9_RF00010;RNaseP_bact_a;|6e-127"
"Noncode=n903,u857,AF160198,RNase_P_RNA,bacterium_EF|5e-80"
-
-
"Livny=P28|7e-14"
"Rnomics=phrW|9e-94"
"Gonzales=2510"
2474,956,426 – 4,956,545+ 612092.41 -1.630.890.885815
2484,956,426 – 4,956,545- 612092.41 -1.401.010.995389
2494,956,505 – 4,956,625+ 612094.56 -1.980.920.995166
2504,956,505 – 4,956,625- 612094.56 -3.261.010.999997
2514,956,535 – 4,956,655+ 612095.28 -1.941.000.999789
2524,956,535 – 4,956,655- 612095.28 -1.620.990.998756
74pao_15,086,925 – 5,087,089"tRNA.48:tRNA-Pro:pao_1:5087011-5087087"
"tRNAscan=type:Lys:anticodon:TTT
f:5086928_t:5087003_strand=-_cove=85.14"
"Rfam=AE016778.1/198055-198127_RF00005;tRNA;|8e-33"
-
-
-
-
- 		2535,086,925 – 5,087,045+ 612092.39 -2.010.980.999449
2545,086,925 – 5,087,045- 612092.39 -2.460.910.998066
2555,086,965 – 5,087,085+ 612092.39 -1.020.940.670396
2565,087,012 – 5,087,089+ 67797.75 -1.551.020.998901
2575,087,012 – 5,087,089- 67797.75 -1.130.960.910954
75pao_15,087,097 – 5,087,176"tRNA.49:tRNA-Asn:pao_1:5087097-5087172"
"tRNAscan=type:Asn:anticodon:GTT
f:5087100_t:5087175_strand=-_cove=82.03"
"Rfam=AE004738.1/1390-1462_RF00005;tRNA;|1e-35"
-
-
-
-
- 		2585,087,097 – 5,087,176+ 67995.00 -2.641.010.999991
2595,087,097 – 5,087,176- 67995.00 -2.290.990.999935
76pao_15,238,276 – 5,238,360"tRNA.51:tRNA-Gln:pao_1:5238277-5238351"
"tRNAscan=type:Gln:anticodon:TTG
f:5238277_t:5238349_strand=+_cove=46.83"
"Rfam=CR522870.1/3096416-3096345_RF00005;tRNA;|1e-23"
-
-
-
-
- 		2605,238,276 – 5,238,360+ 68497.92 -2.461.000.999967
2615,238,276 – 5,238,360- 68497.92 -2.451.000.999966
77pao_15,242,013 – 5,242,104"tRNA.52:tRNA-Met:pao_1:5242026-5242102"
"tRNAscan=type:Met:anticodon:CAT
f:5242026_t:5242112_strand=+_cove=76.41"
"Rfam=AE004881.1/2650-2723_RF00005;tRNA;|4e-36"
-
-
-
-
- 		2625,242,013 – 5,242,104+ 69189.52 -1.080.990.827174
78pao_15,264,104 – 5,264,224"rRNA.8:5S_ribosomal_RNA:pao_1:5264100-5264219"
-
"Rfam=X05517.1/3-118_RF00001;5S_rRNA;|1e-52"
-
-
-
-
- 		2635,264,104 – 5,264,224+ 612096.17 -1.270.950.955677
79pao_15,264,504 – 5,265,184"rRNA.9:23S_ribosomal_RNA:pao_1:5264362-5267252"
-
"Rfam=AF110138.1/3174-3607_RF00028;Intron_gpI;|2e-18"
-
-
-
-
- 		2645,264,504 – 5,264,624- 612099.11 -1.380.980.986965
2655,264,624 – 5,264,744+ 6120100.00 -1.211.000.976934
2665,264,664 – 5,264,784- 6120100.00 -1.561.000.996553
2675,264,704 – 5,264,824- 6120100.00 -1.781.000.998874
2685,264,784 – 5,264,904- 6120100.00 -0.861.000.845431
2695,264,824 – 5,264,944- 612099.56 -0.781.000.779345
2705,264,864 – 5,264,984- 612099.28 -1.451.000.994912
2715,264,904 – 5,265,024+ 612098.83 -1.021.000.945799
2725,264,904 – 5,265,024- 612098.83 -1.900.990.999338
2735,264,944 – 5,265,064+ 612098.72 -1.000.990.922101
2745,264,944 – 5,265,064- 612098.72 -0.910.970.780387
2755,264,984 – 5,265,104+ 612097.72 -1.580.940.982151
2765,265,024 – 5,265,144- 612095.11 -1.661.010.999334
2775,265,064 – 5,265,184- 612094.50 -1.601.010.999041
80pao_15,265,304 – 5,265,664"rRNA.9:23S_ribosomal_RNA:pao_1:5264362-5267252"
-
-
-
-
-
-
- 		2785,265,304 – 5,265,424- 612098.50 -0.751.000.785287
2795,265,344 – 5,265,464- 612098.50 -2.311.000.999933
2805,265,384 – 5,265,504- 612098.50 -0.830.980.795175
2815,265,464 – 5,265,584- 612095.06 -0.991.000.942909
2825,265,504 – 5,265,624- 612095.06 -1.841.000.999673
2835,265,544 – 5,265,664+ 612098.00 -2.350.990.999920
2845,265,544 – 5,265,664- 612098.00 -1.860.950.997849
81pao_15,265,704 – 5,266,342"rRNA.9:23S_ribosomal_RNA:pao_1:5264362-5267252"
-
-
-
-
-
-
- 		2855,265,704 – 5,265,824+ 612090.49 -1.400.890.706745
2865,265,704 – 5,265,824- 612090.49 -2.641.070.999993
2875,265,744 – 5,265,864- 612094.50 -1.311.030.997274
2885,265,784 – 5,265,904- 612096.67 -1.921.010.999868
2895,265,824 – 5,265,944- 612097.67 -1.020.990.938093
2905,265,864 – 5,265,984+ 612098.00 -2.420.920.998739
2915,265,864 – 5,265,984- 612098.00 -1.930.930.995542
2925,265,904 – 5,266,024+ 612097.39 -2.491.010.999981
2935,265,904 – 5,266,024- 612097.39 -1.201.010.990756
2945,265,944 – 5,266,064+ 612097.94 -0.721.030.869620
2955,265,944 – 5,266,064- 612097.94 -0.681.000.715637
2965,265,984 – 5,266,102- 612094.60 -2.020.940.998305
2975,266,024 – 5,266,142- 612094.55 -1.510.970.993578
2985,266,064 – 5,266,182- 612094.55 -0.760.970.573654
2995,266,142 – 5,266,262+ 612099.00 -0.930.980.838187
3005,266,142 – 5,266,262- 612099.00 -1.240.970.958357
3015,266,182 – 5,266,302+ 612098.72 -1.310.980.985799
3025,266,182 – 5,266,302- 612098.72 -1.070.980.937297
3035,266,222 – 5,266,342- 612098.44 -1.270.970.976184
82pao_15,266,462 – 5,266,740"rRNA.9:23S_ribosomal_RNA:pao_1:5264362-5267252"
-
-
-
-
-
-
- 		3045,266,462 – 5,266,582- 612097.44 -1.320.970.984695
3055,266,502 – 5,266,621- 612096.31 -1.180.950.925977
3065,266,542 – 5,266,661- 612096.87 -1.720.960.997253
3075,266,582 – 5,266,701- 612097.21 -1.861.000.999644
3085,266,621 – 5,266,740- 612096.11 -0.851.000.888144
83pao_15,266,860 – 5,266,980"rRNA.9:23S_ribosomal_RNA:pao_1:5264362-5267252"
-
-
-
-
-
-
- 		3095,266,860 – 5,266,980- 612089.06 -1.271.070.990727
84pao_15,267,020 – 5,267,300"rRNA.9:23S_ribosomal_RNA:pao_1:5264362-5267252"
-
"Rfam=AY172151.1/984-1117_RF00002;5_8S_rRNA;|3e-27"
-
-
-
-
- 		3105,267,020 – 5,267,140+ 612093.67 -1.010.920.569769
3115,267,020 – 5,267,140- 612093.67 -3.171.080.999999
3125,267,060 – 5,267,180- 612091.83 -3.221.050.999998
3135,267,100 – 5,267,220- 612093.39 -1.761.030.999756
3145,267,180 – 5,267,300+ 612098.67 -0.870.960.669694
85pao_15,267,480 – 5,267,560"tRNA.53:tRNA-Ala:pao_1:5267479-5267554"
"tRNAscan=type:Ala:anticodon:TGC
f:5267482_t:5267556_strand=-_cove=72.95"
"Rfam=AE004883.1/3583-3511_RF00005;tRNA;|1e-35"
-
-
-
-
- 		3155,267,480 – 5,267,560- 68095.42 -0.911.020.946276
86pao_15,267,581 – 5,267,664"tRNA.54:tRNA-Ile:pao_1:5267583-5267659"
"tRNAscan=type:Ile:anticodon:GAT
f:5267586_t:5267664_strand=-_cove=83.35"
"Rfam=AY342207.1/84-157_RF00005;tRNA;|4e-36"
-
-
-
-
- 		3165,267,581 – 5,267,664+ 68394.83 -4.030.970.999992
3175,267,581 – 5,267,664- 68394.83 -2.910.960.999968
87pao_15,267,675 – 5,268,274"rRNA.10:16S_ribosomal_RNA:pao_1:5267724-5269259"
-
"Rfam=Z93981.1/19-411_RF00177;SSU_rRNA_5;|9e-48"
-
-
-
-
- 		3185,267,675 – 5,267,795+ 612094.61 -1.340.920.910369
3195,267,675 – 5,267,795- 612094.61 -3.150.940.999941
3205,267,715 – 5,267,835- 612096.94 -3.400.980.999993
3215,267,755 – 5,267,875- 612097.83 -0.841.000.881922
3225,267,835 – 5,267,955- 612098.61 -0.690.990.653891
3235,267,915 – 5,268,035- 612098.56 -2.240.990.999879
3245,267,955 – 5,268,075- 612098.28 -1.460.990.994718
3255,267,995 – 5,268,115+ 612099.22 -0.890.980.804513
3265,267,995 – 5,268,115- 612099.22 -1.010.990.934093
3275,268,035 – 5,268,154- 612098.44 -1.420.970.989872
3285,268,075 – 5,268,194+ 612098.72 -1.110.980.952039
3295,268,154 – 5,268,274- 612095.28 -0.841.050.963733
88pao_15,268,354 – 5,269,167"rRNA.10:16S_ribosomal_RNA:pao_1:5267724-5269259"
-
"Rfam=AJ295331.1/19-544_RF00177;SSU_rRNA_5;|0.0"
-
-
-
-
- 		3305,268,354 – 5,268,474- 612096.72 -2.561.030.999992
3315,268,394 – 5,268,514+ 612097.00 -1.491.010.998366
3325,268,394 – 5,268,514- 612097.00 -0.811.010.880535
3335,268,474 – 5,268,594+ 6120100.00 -1.101.000.955862
3345,268,474 – 5,268,594- 6120100.00 -1.621.000.997483
3355,268,514 – 5,268,634- 612097.06 -3.300.960.999983
3365,268,554 – 5,268,674- 612096.00 -1.670.940.989946
3375,268,594 – 5,268,714- 612095.00 -1.141.030.991884
3385,268,714 – 5,268,834- 612093.50 -1.451.080.999606
3395,268,754 – 5,268,874- 612094.33 -1.991.060.999978
3405,268,834 – 5,268,954+ 6120100.00 -1.071.000.947125
3415,268,834 – 5,268,954- 6120100.00 -1.611.000.997432
3425,268,874 – 5,268,994- 6120100.00 -1.871.000.999250
3435,268,914 – 5,269,034- 612098.67 -2.551.010.999977
3445,268,954 – 5,269,074+ 612095.72 -0.910.940.589724
3455,268,954 – 5,269,074- 612095.72 -2.101.030.999968
3465,268,994 – 5,269,114- 612092.00 -2.591.050.999993
3475,269,034 – 5,269,154- 612092.56 -1.571.010.998390
3485,269,047 – 5,269,167- 612092.83 -1.731.040.999735
89pao_15,269,192 – 5,269,308-
-
"Rfam=AJ005875.1/16-465_RF00177;SSU_rRNA_5;|2e-17"
-
-
-
-
- 		3495,269,192 – 5,269,308- 511896.77 -1.860.960.996634
90pao_15,283,959 – 5,284,013"misc_RNA.4:regulatory_RNA_PrrF1:pao_1:5283960-5284110"
-
"Rfam=AE004884.1/7983-8134_RF00444;PrrF;|2e-24"
-
-
"ncRNAdb=Paeru_PrrF-5-AE004884|1e-23"
-
-
"Gonzales=2667"
3505,283,959 – 5,284,013+ 45489.81 -4.260.660.662329
91pao_15,284,038 – 5,284,104"misc_RNA.4:regulatory_RNA_PrrF1:pao_1:5283960-5284110"
-
"Rfam=AE004884.1/7983-8134_RF00444;PrrF;|2e-31"
-
-
"ncRNAdb=Paeru_PrrF-7-AF055999|1e-30"
-
-
"Gonzales=2667"
3515,284,038 – 5,284,104+ 66782.16 -2.710.820.942899
3525,284,038 – 5,284,104- 66782.16 -2.960.840.959949
92pao_15,284,256 – 5,284,313"misc_RNA.5:regulatory_RNA_PrrF2:pao_1:5284172-5284319"
-
"Rfam=AF055999.1/342-489_RF00444;PrrF;|2e-21"
-
-
"ncRNAdb=Paeru_PrrF-6-AE004884|2e-25"
-
-
"Gonzales=2667"
3535,284,256 – 5,284,313+ 65889.43 -3.970.950.999861
3545,284,256 – 5,284,313- 65889.43 -4.530.950.999861
93pao_15,332,038 – 5,332,175"tRNA.55:tRNA-Met:pao_1:5332087-5332163"
-
"Rfam=M21680.1/49-122_RF00005;tRNA;|2e-26"
-
-
-
-
- 		3555,332,038 – 5,332,157+ 612089.52 -2.460.880.981441
3565,332,038 – 5,332,157- 612089.52 -2.530.950.999043
3575,332,056 – 5,332,175+ 612094.05 -2.460.950.999800
3585,332,056 – 5,332,175- 612094.05 -1.770.960.996968
94pao_15,332,255 – 5,332,342"tRNA.56:tRNA-Leu:pao_1:5332254-5332339"
"tRNAscan=type:Leu:anticodon:GAG
f:5332257_t:5332341_strand=-_cove=53.38"
"Rfam=U85643.1/3146-3228_RF00005;tRNA;|1e-29"
-
-
-
-
- 		3595,332,255 – 5,332,342+ 68796.86 -2.020.970.999459
3605,332,255 – 5,332,342- 68796.86 -1.701.000.999316
95pao_15,387,760 – 5,387,871"tRNA.57:tRNA-Sec:pao_1:5387766-5387857"
"tRNAscan=type:SeC(p):anticodon:TCA
f:5387766_t:5387863_strand=-_cove=55.75"
"Rfam=AE004893.1/5261-5171_RF00005;tRNA;|4e-46"
-
-
-
-
- 		3615,387,760 – 5,387,871+ 511187.00 -3.390.930.999924
3625,387,760 – 5,387,871- 511187.00 -3.360.950.999943
96pao_15,537,740 – 5,537,794-
-
-
-
-
-
-
- 		3635,537,740 – 5,537,794+ 65791.43 -2.110.880.965585
3645,537,740 – 5,537,794- 65791.43 -3.031.040.999996
97pao_15,541,830 – 5,541,918"tRNA.59:tRNA-Leu:pao_1:5541830-5541916"
"tRNAscan=type:Leu:anticodon:CAG
f:5541830_t:5541913_strand=+_cove=52.11"
"Rfam=AE016922.1/191818-191901_RF00005;tRNA;|5e-23"
-
-
-
-
- 		3655,541,830 – 5,541,918+ 48886.36 -3.311.050.999520
3665,541,830 – 5,541,918- 48886.36 -2.200.970.988431
98pao_15,583,794 – 5,583,882-
-
"Rfam=AE004910.1/5287-5151_RF00059;THI;|6e-38"
-
-
-
-
- 		3675,583,794 – 5,583,882+ 38888.64 -2.170.900.899212
3685,583,794 – 5,583,882- 38888.64 -1.990.980.970048
99pao_15,798,537 – 5,798,637"tRNA.60:tRNA-Phe:pao_1:5798560-5798635"
"tRNAscan=type:Phe:anticodon:GAA
f:5798560_t:5798655_strand=+_cove=73.80"
"Rfam=AE011896.1/3124-3052_RF00005;tRNA;|1e-27"
-
-
-
-
- 		3695,798,537 – 5,798,637+ 610082.86 -2.460.990.992664
3705,798,537 – 5,798,637- 610082.86 -1.940.940.940290
100pao_15,809,970 – 5,810,048"tRNA.61:tRNA-Thr:pao_1:5809970-5810045"
"tRNAscan=type:Thr:anticodon:TGT
f:5809970_t:5810042_strand=+_cove=77.69"
"Rfam=AE016875.1/166197-166269_RF00005;tRNA;|3e-33"
-
-
-
-
- 		3715,809,970 – 5,810,048+ 67897.18 -1.940.990.999729
3725,809,970 – 5,810,048- 67897.18 -1.190.990.979688
101pao_15,884,361 – 5,884,484-
-
"Rfam=Y00334.1/77-254_RF00013;6S;|3e-65"
"Noncode=n5857,u5106,Y00334,ssrS,Pseudomonas_aeruginosa|5e-66"
-
"ncRNAdb=Paeru_6S-10-Y00334|2e-64"
-
- 		3735,884,361 – 5,884,480+ 612083.39 -2.290.810.871049
3745,884,365 – 5,884,484+ 612081.76 -2.410.790.911163
102pao_15,986,120 – 5,986,170-
-
-
-
-
-
-
- 		3755,986,120 – 5,986,170+ 65096.80 -2.750.940.999831
3765,986,120 – 5,986,170- 65096.80 -2.211.010.999957
103pao_16,039,588 – 6,039,708"rRNA.11:5S_ribosomal_RNA:pao_1:6039584-6039703"
-
"Rfam=X05517.1/3-118_RF00001;5S_rRNA;|1e-52"
-
-
-
-
- 		3776,039,588 – 6,039,708+ 612096.17 -1.270.950.955677
104pao_16,039,988 – 6,040,668"rRNA.12:23S_ribosomal_RNA:pao_1:6039846-6042736"
-
"Rfam=AF110138.1/3174-3607_RF00028;Intron_gpI;|2e-18"
-
-
-
-
- 		3786,039,988 – 6,040,108- 612099.11 -1.380.980.986965
3796,040,108 – 6,040,228+ 6120100.00 -1.211.000.976934
3806,040,148 – 6,040,268- 6120100.00 -1.561.000.996553
3816,040,188 – 6,040,308- 6120100.00 -1.781.000.998874
3826,040,268 – 6,040,388- 6120100.00 -0.861.000.845431
3836,040,308 – 6,040,428- 612099.56 -0.781.000.779345
3846,040,348 – 6,040,468- 612099.28 -1.451.000.994912
3856,040,388 – 6,040,508+ 612098.83 -1.021.000.945799
3866,040,388 – 6,040,508- 612098.83 -1.900.990.999338
3876,040,428 – 6,040,548+ 612098.72 -1.000.990.922101
3886,040,428 – 6,040,548- 612098.72 -0.910.970.780387
3896,040,468 – 6,040,588+ 612097.72 -1.580.940.982151
3906,040,508 – 6,040,628- 612095.11 -1.661.010.999334
3916,040,548 – 6,040,668- 612094.50 -1.601.010.999041
105pao_16,040,788 – 6,041,148"rRNA.12:23S_ribosomal_RNA:pao_1:6039846-6042736"
-
-
-
-
-
-
- 		3926,040,788 – 6,040,908- 612098.50 -0.751.000.785287
3936,040,828 – 6,040,948- 612098.50 -2.311.000.999933
3946,040,868 – 6,040,988- 612098.50 -0.830.980.795175
3956,040,948 – 6,041,068- 612095.06 -0.991.000.942909
3966,040,988 – 6,041,108- 612095.06 -1.841.000.999673
3976,041,028 – 6,041,148+ 612098.00 -2.350.990.999920
3986,041,028 – 6,041,148- 612098.00 -1.860.950.997849
106pao_16,041,188 – 6,041,826"rRNA.12:23S_ribosomal_RNA:pao_1:6039846-6042736"
-
-
-
-
-
-
- 		3996,041,188 – 6,041,308+ 612090.49 -1.400.890.706745
4006,041,188 – 6,041,308- 612090.49 -2.641.070.999993
4016,041,228 – 6,041,348- 612094.50 -1.311.030.997274
4026,041,268 – 6,041,388- 612096.67 -1.921.010.999868
4036,041,308 – 6,041,428- 612097.67 -1.020.990.938093
4046,041,348 – 6,041,468+ 612098.00 -2.420.920.998739
4056,041,348 – 6,041,468- 612098.00 -1.930.930.995542
4066,041,388 – 6,041,508+ 612097.39 -2.491.010.999981
4076,041,388 – 6,041,508- 612097.39 -1.201.010.990756
4086,041,428 – 6,041,548+ 612097.94 -0.721.030.869620
4096,041,428 – 6,041,548- 612097.94 -0.681.000.715637
4106,041,468 – 6,041,586- 612094.60 -2.020.940.998305
4116,041,508 – 6,041,626- 612094.55 -1.510.970.993578
4126,041,548 – 6,041,666- 612094.55 -0.760.970.573654
4136,041,626 – 6,041,746+ 612099.00 -0.930.980.838187
4146,041,626 – 6,041,746- 612099.00 -1.240.970.958357
4156,041,666 – 6,041,786+ 612098.72 -1.310.980.985799
4166,041,666 – 6,041,786- 612098.72 -1.070.980.937297
4176,041,706 – 6,041,826- 612098.44 -1.270.970.976184
107pao_16,041,946 – 6,042,224"rRNA.12:23S_ribosomal_RNA:pao_1:6039846-6042736"
-
-
-
-
-
-
- 		4186,041,946 – 6,042,066- 612097.44 -1.320.970.984695
4196,041,986 – 6,042,105- 612096.31 -1.180.950.925977
4206,042,026 – 6,042,145- 612096.87 -1.720.960.997253
4216,042,066 – 6,042,185- 612097.21 -1.861.000.999644
4226,042,105 – 6,042,224- 612096.11 -0.851.000.888144
108pao_16,042,344 – 6,042,464"rRNA.12:23S_ribosomal_RNA:pao_1:6039846-6042736"
-
-
-
-
-
-
- 		4236,042,344 – 6,042,464- 612089.06 -1.271.070.990727
109pao_16,042,504 – 6,042,784"rRNA.12:23S_ribosomal_RNA:pao_1:6039846-6042736"
-
"Rfam=AY172151.1/984-1117_RF00002;5_8S_rRNA;|3e-27"
-
-
-
-
- 		4246,042,504 – 6,042,624+ 612093.67 -1.010.920.569769
4256,042,504 – 6,042,624- 612093.67 -3.171.080.999999
4266,042,544 – 6,042,664- 612091.83 -3.221.050.999998
4276,042,584 – 6,042,704- 612093.39 -1.761.030.999756
4286,042,664 – 6,042,784+ 612098.67 -0.870.960.669694
110pao_16,042,964 – 6,043,044"tRNA.62:tRNA-Ala:pao_1:6042963-6043038"
"tRNAscan=type:Ala:anticodon:TGC
f:6042966_t:6043040_strand=-_cove=72.95"
"Rfam=AE004883.1/3583-3511_RF00005;tRNA;|1e-35"
-
-
-
-
- 		4296,042,964 – 6,043,044- 68095.42 -0.911.020.946276
111pao_16,043,065 – 6,043,148"tRNA.63:tRNA-Ile:pao_1:6043067-6043143"
"tRNAscan=type:Ile:anticodon:GAT
f:6043070_t:6043148_strand=-_cove=83.35"
"Rfam=AY342207.1/84-157_RF00005;tRNA;|4e-36"
-
-
-
-
- 		4306,043,065 – 6,043,148+ 68394.83 -4.030.970.999992
4316,043,065 – 6,043,148- 68394.83 -2.910.960.999968
112pao_16,043,159 – 6,043,758"rRNA.13:16S_ribosomal_RNA:pao_1:6043208-6044743"
-
"Rfam=Z93981.1/19-411_RF00177;SSU_rRNA_5;|9e-48"
-
-
-
-
- 		4326,043,159 – 6,043,279+ 612094.61 -1.340.920.910369
4336,043,159 – 6,043,279- 612094.61 -3.150.940.999941
4346,043,199 – 6,043,319- 612096.94 -3.400.980.999993
4356,043,239 – 6,043,359- 612097.83 -0.841.000.881922
4366,043,319 – 6,043,439- 612098.61 -0.690.990.653891
4376,043,399 – 6,043,519- 612098.56 -2.240.990.999879
4386,043,439 – 6,043,559- 612098.28 -1.460.990.994718
4396,043,479 – 6,043,599+ 612099.22 -0.890.980.804513
4406,043,479 – 6,043,599- 612099.22 -1.010.990.934093
4416,043,519 – 6,043,638- 612098.44 -1.420.970.989872
4426,043,559 – 6,043,678+ 612098.72 -1.110.980.952039
4436,043,638 – 6,043,758- 612095.28 -0.841.050.963733
113pao_16,043,838 – 6,044,651"rRNA.13:16S_ribosomal_RNA:pao_1:6043208-6044743"
-
"Rfam=AJ295331.1/19-544_RF00177;SSU_rRNA_5;|0.0"
-
-
-
-
- 		4446,043,838 – 6,043,958- 612096.72 -2.561.030.999992
4456,043,878 – 6,043,998+ 612097.00 -1.491.010.998366
4466,043,878 – 6,043,998- 612097.00 -0.811.010.880535
4476,043,958 – 6,044,078+ 6120100.00 -1.101.000.955862
4486,043,958 – 6,044,078- 6120100.00 -1.621.000.997483
4496,043,998 – 6,044,118- 612097.06 -3.300.960.999983
4506,044,038 – 6,044,158- 612096.00 -1.670.940.989946
4516,044,078 – 6,044,198- 612095.00 -1.141.030.991884
4526,044,198 – 6,044,318- 612093.50 -1.451.080.999606
4536,044,238 – 6,044,358- 612094.33 -1.991.060.999978
4546,044,318 – 6,044,438+ 6120100.00 -1.071.000.947125
4556,044,318 – 6,044,438- 6120100.00 -1.611.000.997432
4566,044,358 – 6,044,478- 6120100.00 -1.871.000.999250
4576,044,398 – 6,044,518- 612098.67 -2.551.010.999977
4586,044,438 – 6,044,558+ 612095.72 -0.910.940.589724
4596,044,438 – 6,044,558- 612095.72 -2.101.030.999968
4606,044,478 – 6,044,598- 612092.00 -2.591.050.999993
4616,044,518 – 6,044,638- 612092.56 -1.571.010.998390
4626,044,531 – 6,044,651- 612092.83 -1.731.040.999735
114pao_16,044,676 – 6,044,792-
-
"Rfam=AJ005875.1/16-465_RF00177;SSU_rRNA_5;|2e-17"
-
-
-
-
- 		4636,044,676 – 6,044,792- 511896.77 -1.860.960.996634
115pao_16,051,360 – 6,051,416-
-
-
-
-
-
-
- 		4646,051,360 – 6,051,416+ 45692.26 -1.131.020.500000

Generated by rnazIndex.pl (part of RNAz 1.0) on Fri Sep 21 12:48:51 2007