Locus ID | Seq. ID | Location | Custom annotation | Window ID | Location | Strand | N | Length | Mean pairwise ID | z | SCI | P |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Eco_1 | 192,647 – 192,762 | - - "RNAmicro=f:192647_t:192762_strand:-_p:0.999950" - - - - - - - | 1 | 192,647 – 192,762 | + | 4 | 116 | 83.19 | -4.83 | 0.91 | 0.998347 |
2 | 192,647 – 192,762 | - | 4 | 116 | 83.19 | -4.82 | 0.92 | 0.998338 | ||||
2 | Eco_1 | 223,410 – 223,849 | - - - "Rfam=AF084835.1/19-546_RF00177;SSU_rRNA_5;|2e-23" - - - - - - | 3 | 223,410 – 223,530 | + | 3 | 120 | 95.56 | -1.84 | 0.96 | 0.797584 |
4 | 223,410 – 223,530 | - | 3 | 120 | 95.56 | -2.17 | 0.97 | 0.932946 | ||||
5 | 223,450 – 223,569 | + | 3 | 120 | 98.33 | -1.97 | 0.90 | 0.666081 | ||||
6 | 223,450 – 223,569 | - | 3 | 120 | 98.33 | -1.73 | 0.93 | 0.622868 | ||||
7 | 223,490 – 223,609 | + | 3 | 120 | 96.10 | -3.41 | 0.88 | 0.946953 | ||||
8 | 223,530 – 223,649 | + | 3 | 120 | 94.43 | -4.64 | 0.93 | 0.968799 | ||||
9 | 223,530 – 223,649 | - | 3 | 120 | 94.43 | -2.34 | 0.95 | 0.950808 | ||||
10 | 223,609 – 223,729 | + | 3 | 120 | 95.56 | -1.33 | 0.99 | 0.514807 | ||||
11 | 223,609 – 223,729 | - | 3 | 120 | 95.56 | -1.55 | 0.96 | 0.625329 | ||||
12 | 223,649 – 223,769 | + | 3 | 120 | 96.67 | -3.30 | 0.97 | 0.991211 | ||||
13 | 223,649 – 223,769 | - | 3 | 120 | 96.67 | -2.06 | 1.00 | 0.939129 | ||||
14 | 223,689 – 223,809 | + | 3 | 120 | 96.67 | -2.50 | 0.94 | 0.949658 | ||||
15 | 223,729 – 223,849 | + | 3 | 120 | 98.89 | -1.85 | 1.00 | 0.861554 | ||||
3 | Eco_1 | 223,849 – 224,225 | "known=rRNA.1:16S_ribosomal_RNA :Eco_1:223771-225312" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|0.0" - - - - - - | 16 | 223,889 – 224,009 | + | 3 | 120 | 98.89 | -4.70 | 1.01 | 0.980484 |
17 | 223,929 – 224,049 | + | 3 | 120 | 97.22 | -2.11 | 0.98 | 0.922924 | ||||
18 | 223,969 – 224,089 | + | 3 | 120 | 97.78 | -1.96 | 0.96 | 0.834425 | ||||
19 | 223,969 – 224,089 | - | 3 | 120 | 97.78 | -1.86 | 0.96 | 0.794986 | ||||
20 | 224,009 – 224,129 | + | 3 | 120 | 98.33 | -2.97 | 0.96 | 0.981583 | ||||
21 | 224,009 – 224,129 | - | 3 | 120 | 98.33 | -1.50 | 0.98 | 0.602251 | ||||
22 | 224,049 – 224,169 | + | 3 | 120 | 100.00 | -3.38 | 0.95 | 0.976206 | ||||
23 | 224,049 – 224,169 | - | 3 | 120 | 100.00 | -1.73 | 1.00 | 0.806101 | ||||
24 | 224,105 – 224,225 | + | 3 | 120 | 100.00 | -2.19 | 0.91 | 0.789479 | ||||
25 | 223,849 – 223,969 | + | 3 | 120 | 84.44 | -1.50 | 0.93 | 0.889591 | ||||
26 | 223,889 – 224,009 | + | 3 | 120 | 80.83 | -4.52 | 1.01 | 0.994246 | ||||
27 | 223,889 – 224,009 | - | 3 | 120 | 80.83 | -1.92 | 0.85 | 0.946496 | ||||
28 | 223,929 – 224,049 | + | 3 | 120 | 80.00 | -1.90 | 0.94 | 0.994605 | ||||
29 | 223,969 – 224,089 | + | 3 | 120 | 85.00 | -1.45 | 0.91 | 0.793563 | ||||
30 | 223,969 – 224,089 | - | 3 | 120 | 85.00 | -1.81 | 0.81 | 0.667101 | ||||
31 | 224,009 – 224,129 | + | 3 | 120 | 93.61 | -2.90 | 0.97 | 0.990734 | ||||
32 | 224,049 – 224,169 | + | 3 | 120 | 96.11 | -2.97 | 0.97 | 0.987273 | ||||
4 | Eco_1 | 224,302 – 224,542 | "known=rRNA.1:16S_ribosomal_RNA :Eco_1:223771-225312" - - "Rfam=X97595.1/20-506_RF00177;SSU_rRNA_5;|2e-31" - - - - - - | 33 | 224,302 – 224,422 | + | 3 | 120 | 88.06 | -1.12 | 1.00 | 0.863446 |
34 | 224,342 – 224,462 | + | 3 | 120 | 84.72 | -1.29 | 0.97 | 0.945273 | ||||
35 | 224,422 – 224,542 | + | 3 | 120 | 88.89 | -3.55 | 1.01 | 0.998023 | ||||
36 | 224,422 – 224,542 | - | 3 | 120 | 88.89 | -1.75 | 1.00 | 0.963858 | ||||
5 | Eco_1 | 225,386 – 225,459 | "known=tRNA.1:tRNA-Ile :Eco_1:225381-225457" - - "Rfam=AP002567.1/65365-65438_RF00005;tRNA;|1e-32" - - - - - - | 37 | 225,386 – 225,459 | - | 4 | 73 | 86.25 | -1.82 | 0.83 | 0.839826 |
6 | Eco_1 | 225,786 – 225,986 | "known=rRNA.2:23S_ribosomal_RNA :Eco_1:225759-228662" - - "Rfam=AJ294423.1/19-165_RF00002;5_8S_rRNA;|3e-11" - - - - - - | 38 | 225,786 – 225,906 | + | 4 | 120 | 92.50 | -1.96 | 1.04 | 0.984654 |
39 | 225,786 – 225,906 | - | 4 | 120 | 92.50 | -1.35 | 0.95 | 0.631277 | ||||
40 | 225,826 – 225,946 | + | 4 | 120 | 90.97 | -3.45 | 1.07 | 0.999541 | ||||
41 | 225,826 – 225,946 | - | 4 | 120 | 90.97 | -2.06 | 0.98 | 0.985750 | ||||
42 | 225,866 – 225,986 | + | 4 | 120 | 92.64 | -4.52 | 1.02 | 0.996602 | ||||
43 | 225,866 – 225,986 | - | 4 | 120 | 92.64 | -1.81 | 1.08 | 0.977469 | ||||
7 | Eco_1 | 226,026 – 226,146 | "known=rRNA.2:23S_ribosomal_RNA :Eco_1:225759-228662" - - - - - - - - - | 44 | 226,026 – 226,146 | + | 4 | 120 | 92.22 | -2.21 | 0.97 | 0.988814 |
8 | Eco_1 | 226,344 – 226,824 | "known=rRNA.2:23S_ribosomal_RNA :Eco_1:225759-228662" - "RNAmicro=f:226584_t:226703_strand:+_p:0.640825" - - - - - - - | 45 | 226,344 – 226,464 | + | 4 | 120 | 96.94 | -2.19 | 1.01 | 0.958866 |
46 | 226,384 – 226,504 | + | 4 | 120 | 97.78 | -1.82 | 0.97 | 0.766672 | ||||
47 | 226,424 – 226,544 | + | 4 | 120 | 99.58 | -3.27 | 1.00 | 0.939461 | ||||
48 | 226,464 – 226,584 | + | 4 | 120 | 99.58 | -1.91 | 1.00 | 0.670074 | ||||
49 | 226,584 – 226,704 | - | 4 | 120 | 96.11 | -1.58 | 0.98 | 0.730737 | ||||
50 | 226,704 – 226,824 | + | 4 | 120 | 99.58 | -1.78 | 0.98 | 0.533321 | ||||
9 | Eco_1 | 253,336 – 253,467 | - - "RNAmicro=f:253347_t:253466_strand:+_p:0.940575" "Rfam=AL627279.1/105836-106061_RF00059;THI;|2e-11" - - - - - - | 51 | 253,336 – 253,456 | + | 3 | 120 | 84.44 | -4.67 | 0.86 | 0.980710 |
52 | 253,336 – 253,456 | - | 3 | 120 | 84.44 | -2.43 | 0.77 | 0.894680 | ||||
53 | 253,347 – 253,467 | + | 3 | 120 | 84.44 | -5.21 | 0.86 | 0.960527 | ||||
54 | 253,347 – 253,467 | - | 3 | 120 | 84.44 | -3.12 | 0.78 | 0.975158 | ||||
10 | Eco_1 | 437,374 – 437,498 | - - "RNAmicro=f:437378_t:437497_strand:+_p:0.999992" "Rfam=AL627279.1/105836-106061_RF00059;THI;|4e-09" - - - - - - | 55 | 437,374 – 437,494 | + | 3 | 120 | 87.22 | -3.04 | 0.95 | 0.993912 |
56 | 437,374 – 437,494 | - | 3 | 120 | 87.22 | -5.52 | 0.90 | 0.924385 | ||||
57 | 437,378 – 437,498 | + | 3 | 120 | 85.56 | -2.97 | 0.92 | 0.990499 | ||||
58 | 437,378 – 437,498 | - | 3 | 120 | 85.56 | -5.57 | 0.87 | 0.929257 | ||||
11 | Eco_1 | 563,946 – 564,025 | "known=tRNA.6:tRNA-Arg :Eco_1:563946-564022" "tRNAscan=type:Arg:anticodon:TCT f:563946_t:564018_strand=+_cove=59.48" - "Rfam=M31074.1/2197-2124_RF00005;tRNA;|1e-35" - - - - - - | 59 | 563,946 – 564,025 | + | 5 | 79 | 84.90 | -2.08 | 1.04 | 0.995001 |
60 | 563,946 – 564,025 | - | 5 | 79 | 84.90 | -2.45 | 1.04 | 0.999091 | ||||
12 | Eco_1 | 596,201 – 596,329 | - - "RNAmicro=f:596209_t:596328_strand:+_p:0.978780" "Rfam=AL627279.1/105836-106061_RF00059;THI;|3e-13" - - - - - - | 61 | 596,201 – 596,321 | + | 3 | 120 | 86.39 | -2.86 | 0.94 | 0.992685 |
62 | 596,201 – 596,321 | - | 3 | 120 | 86.39 | -4.93 | 0.92 | 0.966853 | ||||
63 | 596,209 – 596,329 | + | 3 | 120 | 86.94 | -1.80 | 0.94 | 0.929807 | ||||
64 | 596,209 – 596,329 | - | 3 | 120 | 86.94 | -4.43 | 0.92 | 0.983253 | ||||
13 | Eco_1 | 695,607 – 695,732 | "known=tRNA.7:tRNA-Gln :Eco_1:695653-695727" - - "Rfam=AJ414153.1/33103-33032_RF00005;tRNA;|6e-30" - - - - - - | 65 | 695,607 – 695,727 | + | 3 | 120 | 97.78 | -4.09 | 1.00 | 0.991512 |
66 | 695,607 – 695,727 | - | 3 | 120 | 97.78 | -4.47 | 1.00 | 0.986771 | ||||
67 | 695,612 – 695,732 | + | 3 | 120 | 97.22 | -3.58 | 0.99 | 0.994020 | ||||
68 | 695,612 – 695,732 | - | 3 | 120 | 97.22 | -5.08 | 0.99 | 0.964216 | ||||
14 | Eco_1 | 695,765 – 695,847 | "known=tRNA.8:tRNA-Gln :Eco_1:695765-695839" "tRNAscan=type:Gln:anticodon:CTG f:695767_t:695840_strand=-_cove=56.82" - "Rfam=AJ414153.1/33103-33032_RF00005;tRNA;|3e-30" - - - - - - | 69 | 695,765 – 695,847 | + | 4 | 82 | 87.06 | -2.58 | 1.03 | 0.998564 |
70 | 695,765 – 695,847 | - | 4 | 82 | 87.06 | -4.04 | 0.96 | 0.998984 | ||||
15 | Eco_1 | 695,884 – 695,965 | "known=tRNA.9:tRNA-Met :Eco_1:695887-695963" "tRNAscan=type:Met:anticodon:CAT f:695889_t:695967_strand=-_cove=80.41" - "Rfam=AL627267.1/195304-195231_RF00005;tRNA;|4e-36" - - - - - - | 71 | 695,884 – 695,965 | + | 3 | 81 | 92.59 | -2.62 | 1.07 | 0.998217 |
72 | 695,884 – 695,965 | - | 3 | 81 | 92.59 | -2.27 | 0.96 | 0.960254 | ||||
16 | Eco_1 | 695,977 – 696,056 | "known=tRNA.10:tRNA-Gln :Eco_1:695979-696053" "tRNAscan=type:Gln:anticodon:TTG f:695981_t:696056_strand=-_cove=54.87" - "Rfam=AE005245.1/5142-5071_RF00005;tRNA;|5e-35" - - - - - - | 73 | 695,977 – 696,056 | + | 4 | 79 | 86.68 | -2.53 | 1.06 | 0.998785 |
74 | 695,977 – 696,056 | - | 4 | 79 | 86.68 | -3.33 | 0.97 | 0.999143 | ||||
17 | Eco_1 | 696,085 – 696,167 | "known=tRNA.11:tRNA-Gln :Eco_1:696088-696162" "tRNAscan=type:Gln:anticodon:TTG f:696090_t:696166_strand=-_cove=54.87" - "Rfam=AE005245.1/5142-5071_RF00005;tRNA;|6e-35" - - - - - - | 75 | 696,085 – 696,167 | + | 4 | 82 | 84.16 | -2.65 | 1.00 | 0.998025 |
76 | 696,085 – 696,167 | - | 4 | 82 | 84.16 | -3.33 | 0.93 | 0.998916 | ||||
18 | Eco_1 | 779,984 – 780,142 | "known=tRNA.15:tRNA-Val :Eco_1:779988-780063" "tRNAscan=type:Val:anticodon:TAC f:779987_t:780062_strand=+_cove=68.73" - "Rfam=X70450.1/1-73_RF00005;tRNA;|7e-27" - - - - - - | 77 | 779,984 – 780,102 | + | 3 | 120 | 96.66 | -1.40 | 1.00 | 0.592584 |
78 | 779,984 – 780,102 | - | 3 | 120 | 96.66 | -1.61 | 1.00 | 0.750010 | ||||
79 | 780,024 – 780,142 | + | 3 | 120 | 98.89 | -2.63 | 1.00 | 0.979717 | ||||
80 | 780,024 – 780,142 | - | 3 | 120 | 98.89 | -2.10 | 0.99 | 0.921180 | ||||
81 | 780,065 – 780,142 | + | 4 | 77 | 93.93 | -3.24 | 1.03 | 0.998711 | ||||
82 | 780,065 – 780,142 | - | 4 | 77 | 93.93 | -2.94 | 1.05 | 0.998550 | ||||
19 | Eco_1 | 780,275 – 780,446 | "known=tRNA.17:tRNA-Val :Eco_1:780291-780366" "tRNAscan=type:Val:anticodon:TAC f:780290_t:780377_strand=+_cove=68.73" - "Rfam=X70450.1/1-73_RF00005;tRNA;|8e-27" - - - - - - | 83 | 780,275 – 780,395 | - | 3 | 120 | 98.33 | -1.73 | 0.98 | 0.754909 |
84 | 780,315 – 780,435 | + | 3 | 120 | 99.44 | -1.51 | 0.97 | 0.586103 | ||||
85 | 780,326 – 780,446 | + | 3 | 120 | 99.44 | -2.52 | 1.00 | 0.972081 | ||||
86 | 780,326 – 780,446 | - | 3 | 120 | 99.44 | -1.79 | 0.99 | 0.811893 | ||||
87 | 780,370 – 780,446 | + | 5 | 76 | 95.79 | -3.36 | 1.03 | 0.999995 | ||||
88 | 780,370 – 780,446 | - | 5 | 76 | 95.79 | -2.92 | 1.04 | 0.999993 | ||||
20 | Eco_1 | 780,592 – 780,674 | "known=tRNA.19:tRNA-Lys :Eco_1:780592-780667" "tRNAscan=type:Lys:anticodon:TTT f:780592_t:780663_strand=+_cove=76.57" - "Rfam=AE016778.1/198055-198127_RF00005;tRNA;|2e-25" - - - - - - | 89 | 780,592 – 780,674 | + | 5 | 82 | 92.32 | -3.19 | 1.03 | 0.999998 |
90 | 780,592 – 780,674 | - | 5 | 82 | 92.32 | -2.82 | 1.04 | 0.999996 | ||||
21 | Eco_1 | 780,800 – 780,885 | "known=tRNA.20:tRNA-Lys :Eco_1:780800-780875" "tRNAscan=type:Lys:anticodon:TTT f:780800_t:780871_strand=+_cove=76.57" - "Rfam=AE016778.1/198055-198127_RF00005;tRNA;|2e-25" - - - - - - | 91 | 780,800 – 780,885 | + | 4 | 85 | 94.71 | -3.41 | 1.04 | 0.998237 |
92 | 780,800 – 780,885 | - | 4 | 85 | 94.71 | -2.80 | 1.04 | 0.997454 | ||||
22 | Eco_1 | 802,544 – 802,673 | - - "RNAmicro=f:802553_t:802672_strand:+_p:0.999990" "Rfam=AL627279.1/105836-106061_RF00059;THI;|3e-13" - - - - - - | 93 | 802,544 – 802,664 | + | 3 | 120 | 84.44 | -2.96 | 0.94 | 0.995665 |
94 | 802,544 – 802,664 | - | 3 | 120 | 84.44 | -5.17 | 0.92 | 0.961977 | ||||
95 | 802,553 – 802,673 | + | 3 | 120 | 86.94 | -2.28 | 0.94 | 0.977884 | ||||
96 | 802,553 – 802,673 | - | 3 | 120 | 86.94 | -4.93 | 0.92 | 0.964861 | ||||
23 | Eco_1 | 1,096,781 – 1,096,901 | "known=tRNA.23:tRNA-Ser :Eco_1:1096788-1096875" "tRNAscan=type:Ser:anticodon:GGA f:1096790_t:1096883_strand=-_cove=53.14" - "Rfam=AE004253.1/4495-4579_RF00005;tRNA;|1e-27" - - - - - - | 97 | 1,096,781 – 1,096,901 | - | 3 | 120 | 97.22 | -1.56 | 0.96 | 0.587771 |
24 | Eco_1 | 1,286,584 – 1,286,856 | "known=tRNA.25:tRNA-Tyr :Eco_1:1286761-1286845" - - "Rfam=K01197.1/649-818_RF00391;RtT;|2e-81" "Noncode=n458,u428,AE008778,rtT,Salmonella_typhimurium_LT2|3e-35" - - - - "ncRNAdb=Ecoli_RtT-9-U00096|4e-92" | 98 | 1,286,802 – 1,286,856 | + | 3 | 54 | 100.00 | -2.37 | 1.00 | 0.960955 |
99 | 1,286,584 – 1,286,704 | - | 3 | 120 | 89.17 | -2.50 | 0.89 | 0.940208 | ||||
25 | Eco_1 | 1,286,760 – 1,286,848 | "known=tRNA.25:tRNA-Tyr :Eco_1:1286761-1286845" "tRNAscan=type:Tyr:anticodon:GTA f:1286763_t:1287023_strand=-_cove=46.86" - "Rfam=X57091.1/249-330_RF00005;tRNA;|4e-36" - - - - - "ncRNAdb=Sente_RtT-9-AE016839|6e-33" | 100 | 1,286,760 – 1,286,848 | + | 6 | 88 | 90.59 | -2.36 | 0.91 | 0.994588 |
101 | 1,286,760 – 1,286,848 | - | 6 | 88 | 90.59 | -2.08 | 0.94 | 0.996333 | ||||
26 | Eco_1 | 1,407,147 – 1,407,267 | - - - - - - - - - - | 102 | 1,407,147 – 1,407,267 | - | 3 | 120 | 97.78 | -1.46 | 1.01 | 0.649230 |
27 | Eco_1 | 1,744,539 – 1,744,617 | "known=tRNA.27:tRNA-Val :Eco_1:1744540-1744616" "tRNAscan=type:Val:anticodon:GAC f:1744539_t:1744612_strand=+_cove=76.53" - "Rfam=AE016838.1/154594-154521_RF00005;tRNA;|1e-26" - - - - - - | 103 | 1,744,539 – 1,744,617 | + | 3 | 78 | 80.34 | -2.18 | 0.89 | 0.989947 |
104 | 1,744,539 – 1,744,617 | - | 3 | 78 | 80.34 | -2.46 | 0.91 | 0.996830 | ||||
28 | Eco_1 | 1,860,640 – 1,860,760 | - - - - - - - - - - | 105 | 1,860,640 – 1,860,760 | + | 3 | 120 | 94.44 | -1.73 | 0.92 | 0.622054 |
29 | Eco_1 | 1,913,559 – 1,913,655 | - - - - - - - - - - | 106 | 1,913,559 – 1,913,655 | + | 4 | 97 | 92.40 | -3.37 | 0.88 | 0.990625 |
107 | 1,913,559 – 1,913,655 | - | 4 | 97 | 92.40 | -2.56 | 0.84 | 0.956350 | ||||
30 | Eco_1 | 1,921,127 – 1,921,221 | "known=misc_RNA.18:unknown_RNA :Eco_1:1921090-1921338" - - "Rfam=AE008783.1/12435-12690_RF00101;SraC_RyeA;|8e-44" - - - - - "ncRNAdb=Ecoli_SraC-7-U00096|3e-47" | 108 | 1,921,127 – 1,921,221 | + | 3 | 95 | 95.77 | -3.65 | 0.90 | 0.972924 |
109 | 1,921,127 – 1,921,221 | - | 3 | 95 | 95.77 | -3.60 | 0.88 | 0.959547 | ||||
31 | Eco_1 | 1,990,066 – 1,990,144 | "known=tRNA.30:tRNA-Gly :Eco_1:1990066-1990141" "tRNAscan=type:Gly:anticodon:GCC f:1990068_t:1990142_strand=-_cove=71.11" - "Rfam=AE008904.1/10704-10776_RF00005;tRNA;|1e-35" - - - - - - | 110 | 1,990,066 – 1,990,144 | + | 6 | 78 | 96.40 | -2.22 | 1.01 | 0.999965 |
111 | 1,990,066 – 1,990,144 | - | 6 | 78 | 96.40 | -2.37 | 1.00 | 0.999967 | ||||
32 | Eco_1 | 2,042,549 – 2,042,650 | "known=tRNA.32:tRNA-Asn :Eco_1:2042573-2042648" "tRNAscan=type:Asn:anticodon:GTT f:2042572_t:2042667_strand=+_cove=80.09" - "Rfam=AJ414149.1/59646-59574_RF00005;tRNA;|2e-35" - - - - - - | 112 | 2,042,549 – 2,042,650 | - | 5 | 101 | 86.10 | -1.43 | 0.94 | 0.689023 |
33 | Eco_1 | 2,056,034 – 2,056,157 | "known=tRNA.33:tRNA-Asn :Eco_1:2056051-2056126" "tRNAscan=type:Asn:anticodon:GTT f:2056053_t:2056144_strand=-_cove=80.09" - "Rfam=AJ414149.1/59646-59574_RF00005;tRNA;|2e-35" - - - - - - | 113 | 2,056,034 – 2,056,154 | + | 4 | 120 | 90.97 | -1.63 | 0.90 | 0.824716 |
114 | 2,056,037 – 2,056,157 | + | 4 | 120 | 90.97 | -1.53 | 0.93 | 0.788032 | ||||
34 | Eco_1 | 2,057,871 – 2,057,954 | "known=tRNA.34:tRNA-Asn :Eco_1:2057875-2057950" "tRNAscan=type:Asn:anticodon:GTT f:2057874_t:2057949_strand=+_cove=80.09" - "Rfam=AJ414149.1/59646-59574_RF00005;tRNA;|1e-35" - - - - - - | 115 | 2,057,871 – 2,057,954 | + | 5 | 83 | 93.24 | -2.12 | 1.00 | 0.999847 |
116 | 2,057,871 – 2,057,954 | - | 5 | 83 | 93.24 | -2.84 | 1.00 | 0.999993 | ||||
35 | Eco_1 | 2,403,135 – 2,403,312 | - - "RNAmicro=f:2403135_t:2403254_strand:+_p:0.948898" - - - - - - - | 117 | 2,403,135 – 2,403,255 | + | 3 | 120 | 94.17 | -2.12 | 0.90 | 0.811831 |
118 | 2,403,135 – 2,403,255 | - | 3 | 120 | 94.17 | -2.06 | 0.94 | 0.871983 | ||||
119 | 2,403,175 – 2,403,295 | + | 3 | 120 | 91.39 | -2.26 | 0.94 | 0.948726 | ||||
120 | 2,403,175 – 2,403,295 | - | 3 | 120 | 91.39 | -1.98 | 0.89 | 0.751671 | ||||
121 | 2,403,192 – 2,403,312 | + | 3 | 120 | 91.67 | -1.79 | 0.87 | 0.580084 | ||||
36 | Eco_1 | 2,428,786 – 2,428,941 | - - - - - - - - - - | 122 | 2,428,786 – 2,428,906 | + | 3 | 120 | 96.11 | -1.69 | 0.96 | 0.702925 |
123 | 2,428,821 – 2,428,941 | + | 3 | 120 | 84.44 | -2.81 | 0.88 | 0.983270 | ||||
124 | 2,428,821 – 2,428,941 | - | 3 | 120 | 84.44 | -3.06 | 0.87 | 0.988098 | ||||
37 | Eco_1 | 2,516,060 – 2,516,140 | "known=tRNA.38:tRNA-Ala :Eco_1:2516063-2516138" "tRNAscan=type:Ala:anticodon:GGC f:2516065_t:2516142_strand=-_cove=66.32" - "Rfam=AE016835.1/214862-214934_RF00005;tRNA;|1e-35" - - - - - - | 125 | 2,516,060 – 2,516,140 | + | 6 | 80 | 90.14 | -1.73 | 0.96 | 0.990880 |
126 | 2,516,060 – 2,516,140 | - | 6 | 80 | 90.14 | -1.52 | 1.04 | 0.997396 | ||||
38 | Eco_1 | 2,518,953 – 2,519,029 | "known=tRNA.40:tRNA-Val :Eco_1:2518953-2519028" "tRNAscan=type:Val:anticodon:TAC f:2518953_t:2519024_strand=+_cove=57.51" - "Rfam=X70450.1/1-73_RF00005;tRNA;|1e-26" - - - - - - | 127 | 2,518,953 – 2,519,029 | + | 4 | 76 | 93.42 | -2.97 | 0.97 | 0.997443 |
128 | 2,518,953 – 2,519,029 | - | 4 | 76 | 93.42 | -2.16 | 1.03 | 0.990979 | ||||
39 | Eco_1 | 2,519,073 – 2,519,151 | "known=tRNA.41:tRNA-Val :Eco_1:2519073-2519148" "tRNAscan=type:Val:anticodon:TAC f:2519073_t:2519144_strand=+_cove=57.51" - "Rfam=X70450.1/1-73_RF00005;tRNA;|1e-26" - - - - - - | 129 | 2,519,073 – 2,519,151 | + | 5 | 78 | 87.56 | -2.61 | 0.91 | 0.999137 |
130 | 2,519,073 – 2,519,151 | - | 5 | 78 | 87.56 | -1.76 | 0.92 | 0.954146 | ||||
40 | Eco_1 | 2,519,195 – 2,519,357 | "known=tRNA.43:tRNA-Lys :Eco_1:2519275-2519350" "tRNAscan=type:Val:anticodon:TAC f:2519195_t:2519266_strand=+_cove=57.51" - "Rfam=X70450.1/1-73_RF00005;tRNA;|3e-26" - - - - - - | 131 | 2,519,195 – 2,519,315 | + | 3 | 120 | 99.44 | -1.33 | 1.00 | 0.532152 |
132 | 2,519,233 – 2,519,353 | + | 3 | 120 | 99.44 | -2.48 | 1.00 | 0.971961 | ||||
133 | 2,519,233 – 2,519,353 | - | 3 | 120 | 99.44 | -2.14 | 1.00 | 0.934936 | ||||
134 | 2,519,275 – 2,519,357 | + | 5 | 82 | 91.54 | -3.20 | 1.03 | 0.999997 | ||||
135 | 2,519,275 – 2,519,357 | - | 5 | 82 | 91.54 | -2.82 | 1.04 | 0.999995 | ||||
41 | Eco_1 | 2,541,670 – 2,541,795 | - - "RNAmicro=f:2541675_t:2541794_strand:+_p:0.999993" - - - - - - - | 136 | 2,541,670 – 2,541,790 | + | 4 | 120 | 80.17 | -4.47 | 0.87 | 0.999661 |
137 | 2,541,670 – 2,541,790 | - | 4 | 120 | 80.17 | -5.41 | 0.95 | 0.996678 | ||||
138 | 2,541,675 – 2,541,795 | + | 4 | 120 | 82.68 | -4.74 | 0.91 | 0.998724 | ||||
139 | 2,541,675 – 2,541,795 | - | 4 | 120 | 82.68 | -4.98 | 0.98 | 0.997534 | ||||
42 | Eco_1 | 2,724,574 – 2,724,694 | "known=rRNA.5:23S_ribosomal_RNA :Eco_1:2724303-2727206" - - - - - - - - - | 140 | 2,724,574 – 2,724,694 | - | 4 | 120 | 98.75 | -1.86 | 1.00 | 0.735061 |
43 | Eco_1 | 2,724,774 – 2,724,986 | "known=rRNA.5:23S_ribosomal_RNA :Eco_1:2724303-2727206" - - - - - - - - - | 141 | 2,724,774 – 2,724,894 | - | 4 | 120 | 92.22 | -2.60 | 0.98 | 0.996926 |
142 | 2,724,814 – 2,724,934 | - | 4 | 120 | 90.42 | -2.49 | 1.05 | 0.998469 | ||||
143 | 2,724,854 – 2,724,974 | - | 4 | 120 | 94.17 | -1.62 | 1.03 | 0.896051 | ||||
144 | 2,724,866 – 2,724,986 | - | 4 | 120 | 94.17 | -1.40 | 0.90 | 0.523606 | ||||
44 | Eco_1 | 2,726,403 – 2,726,681 | "known=rRNA.5:23S_ribosomal_RNA :Eco_1:2724303-2727206" - - - - - - - - - | 145 | 2,726,403 – 2,726,523 | - | 3 | 120 | 92.50 | -3.44 | 1.01 | 0.997669 |
146 | 2,726,523 – 2,726,643 | - | 3 | 120 | 86.94 | -2.06 | 1.05 | 0.998520 | ||||
147 | 2,726,563 – 2,726,681 | - | 3 | 120 | 86.94 | -1.87 | 0.89 | 0.837800 | ||||
45 | Eco_1 | 2,727,391 – 2,727,469 | "known=tRNA.44:tRNA-Glu :Eco_1:2727391-2727466" "tRNAscan=type:Glu:anticodon:TTC f:2727393_t:2727467_strand=-_cove=56.72" - "Rfam=U55299.1/85-158_RF00005;tRNA;|3e-33" - - - - - - | 148 | 2,727,391 – 2,727,469 | + | 6 | 78 | 93.14 | -1.80 | 1.01 | 0.999616 |
149 | 2,727,391 – 2,727,469 | - | 6 | 78 | 93.14 | -2.95 | 0.96 | 0.999962 | ||||
46 | Eco_1 | 2,727,636 – 2,727,796 | "known=rRNA.6:16S_ribosomal_RNA :Eco_1:2727638-2729179" - - "Rfam=Z93981.1/19-411_RF00177;SSU_rRNA_5;|4e-16" - - - - - - | 150 | 2,727,636 – 2,727,756 | - | 5 | 120 | 96.67 | -2.58 | 0.97 | 0.999921 |
151 | 2,727,676 – 2,727,796 | - | 5 | 120 | 96.67 | -1.32 | 1.03 | 0.942716 | ||||
47 | Eco_1 | 2,727,836 – 2,728,195 | "known=rRNA.6:16S_ribosomal_RNA :Eco_1:2727638-2729179" - - "Rfam=Z93956.1/19-543_RF00177;SSU_rRNA_5;|4e-30" - - - - - - | 152 | 2,727,836 – 2,727,956 | - | 5 | 120 | 92.25 | -1.39 | 1.00 | 0.969299 |
153 | 2,727,876 – 2,727,996 | - | 5 | 120 | 91.25 | -2.22 | 1.01 | 0.999891 | ||||
154 | 2,727,916 – 2,728,036 | - | 5 | 120 | 94.67 | -2.08 | 0.97 | 0.999653 | ||||
155 | 2,727,956 – 2,728,075 | - | 5 | 120 | 93.47 | -1.45 | 0.97 | 0.974219 | ||||
156 | 2,728,075 – 2,728,195 | - | 5 | 120 | 91.42 | -1.34 | 1.02 | 0.954037 | ||||
48 | Eco_1 | 2,728,201 – 2,728,321 | "known=rRNA.6:16S_ribosomal_RNA :Eco_1:2727638-2729179" - - "Rfam=AY471685.1/800-1364_RF00177;SSU_rRNA_5;|9e-38" - - - - - - | 157 | 2,728,201 – 2,728,321 | - | 5 | 120 | 98.67 | -1.71 | 0.98 | 0.981670 |
49 | Eco_1 | 2,728,780 – 2,729,060 | "known=rRNA.6:16S_ribosomal_RNA :Eco_1:2727638-2729179" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|1e-146" - - - - - - | 158 | 2,728,780 – 2,728,900 | - | 3 | 120 | 96.67 | -2.66 | 1.02 | 0.991840 |
159 | 2,728,820 – 2,728,940 | - | 3 | 120 | 93.89 | -2.63 | 1.02 | 0.993760 | ||||
160 | 2,728,860 – 2,728,980 | + | 3 | 120 | 86.67 | -2.02 | 0.84 | 0.759518 | ||||
161 | 2,728,860 – 2,728,980 | - | 3 | 120 | 86.67 | -1.94 | 0.94 | 0.943196 | ||||
162 | 2,728,900 – 2,729,020 | - | 3 | 120 | 81.39 | -1.81 | 0.90 | 0.964912 | ||||
163 | 2,728,940 – 2,729,060 | + | 3 | 120 | 82.78 | -1.71 | 0.76 | 0.638268 | ||||
164 | 2,728,940 – 2,729,060 | - | 3 | 120 | 82.78 | -4.97 | 1.03 | 0.979440 | ||||
50 | Eco_1 | 2,735,669 – 2,735,767 | - - - - - - - - - - | 165 | 2,735,669 – 2,735,767 | + | 3 | 99 | 92.57 | -2.99 | 0.88 | 0.956116 |
166 | 2,735,669 – 2,735,767 | - | 3 | 99 | 92.57 | -2.79 | 0.91 | 0.964473 | ||||
51 | Eco_1 | 2,816,078 – 2,816,159 | "known=tRNA.47:tRNA-Arg :Eco_1:2816081-2816157" "tRNAscan=type:Arg:anticodon:ACG f:2816083_t:2816161_strand=-_cove=80.27" - "Rfam=U32747.1/5480-5407_RF00005;tRNA;|5e-26" - - - - - - | 167 | 2,816,078 – 2,816,159 | + | 5 | 98 | 83.32 | -2.69 | 0.97 | 0.998350 |
168 | 2,816,078 – 2,816,159 | - | 5 | 98 | 83.32 | -1.48 | 1.04 | 0.865735 | ||||
52 | Eco_1 | 2,816,219 – 2,816,299 | "known=tRNA.48:tRNA-Arg :Eco_1:2816220-2816296" "tRNAscan=type:Arg:anticodon:ACG f:2816222_t:2816298_strand=-_cove=80.27" - "Rfam=U32747.1/5480-5407_RF00005;tRNA;|5e-26" - - - - - - | 169 | 2,816,219 – 2,816,299 | + | 4 | 80 | 93.33 | -3.10 | 1.01 | 0.998689 |
170 | 2,816,219 – 2,816,299 | - | 4 | 80 | 93.33 | -2.11 | 1.06 | 0.991045 | ||||
53 | Eco_1 | 2,816,494 – 2,816,679 | "known=tRNA.49:tRNA-Arg :Eco_1:2816495-2816571" "tRNAscan=type:Arg:anticodon:ACG f:2816497_t:2816573_strand=-_cove=80.27" - "Rfam=K01556.1/1-90_RF00005;tRNA;|3e-45" - - - - - - | 171 | 2,816,494 – 2,816,609 | + | 4 | 120 | 93.19 | -2.60 | 0.88 | 0.976868 |
172 | 2,816,494 – 2,816,609 | - | 4 | 120 | 93.19 | -2.96 | 0.93 | 0.995544 | ||||
173 | 2,816,564 – 2,816,679 | - | 4 | 120 | 93.62 | -2.54 | 0.92 | 0.986465 | ||||
54 | Eco_1 | 2,817,209 – 2,817,329 | - - - - - - - - - - | 174 | 2,817,209 – 2,817,329 | + | 3 | 120 | 96.67 | -2.72 | 0.90 | 0.930609 |
175 | 2,817,209 – 2,817,329 | - | 3 | 120 | 96.67 | -1.58 | 0.93 | 0.522778 | ||||
55 | Eco_1 | 2,940,691 – 2,940,916 | "known=misc_RNA.32:regulatory_sRNA :Eco_1:2940718-2940922" - - "Rfam=U00096.2/2940718-2940830_RF00022;GcvB;|6e-59" "Noncode=n3836,u3416,AP002563,gcvB,Escherichia_coli_O157:H7|9e-60" - - - - "ncRNAdb=Ecoli_GcvB-2-U00096|4e-58" | 176 | 2,940,691 – 2,940,811 | + | 3 | 120 | 97.78 | -2.44 | 1.02 | 0.983309 |
177 | 2,940,731 – 2,940,851 | + | 3 | 120 | 95.00 | -1.36 | 1.03 | 0.697445 | ||||
178 | 2,940,731 – 2,940,851 | - | 3 | 120 | 95.00 | -2.44 | 0.92 | 0.926981 | ||||
179 | 2,940,771 – 2,940,891 | - | 3 | 120 | 97.22 | -3.02 | 1.00 | 0.993266 | ||||
180 | 2,940,796 – 2,940,916 | + | 3 | 120 | 96.11 | -2.44 | 0.98 | 0.974133 | ||||
181 | 2,940,796 – 2,940,916 | - | 3 | 120 | 96.11 | -4.56 | 1.00 | 0.988957 | ||||
56 | Eco_1 | 2,945,517 – 2,945,598 | "known=tRNA.52:tRNA-Met :Eco_1:2945519-2945595" "tRNAscan=type:Met:anticodon:CAT f:2945518_t:2945592_strand=+_cove=63.66" - "Rfam=M21680.1/49-122_RF00005;tRNA;|9e-34" - - - - - - | 182 | 2,945,517 – 2,945,598 | + | 6 | 81 | 96.05 | -1.29 | 1.00 | 0.993220 |
57 | Eco_1 | 2,945,627 – 2,945,708 | "known=tRNA.53:tRNA-Met :Eco_1:2945629-2945705" "tRNAscan=type:Met:anticodon:CAT f:2945628_t:2945702_strand=+_cove=63.66" - "Rfam=M21680.1/49-122_RF00005;tRNA;|9e-34" - - - - - - | 183 | 2,945,627 – 2,945,708 | + | 6 | 82 | 95.33 | -1.26 | 1.00 | 0.991681 |
58 | Eco_1 | 2,997,005 – 2,997,125 | "known=tRNA.54:tRNA-Gly :Eco_1:2997006-2997079" "tRNAscan=type:Gly:anticodon:CCC f:2997008_t:2997081_strand=-_cove=66.40" - "Rfam=K00197.1/1-71_RF00005;tRNA;|4e-34" - - - - - - | 184 | 2,997,005 – 2,997,125 | + | 3 | 120 | 93.31 | -4.22 | 0.99 | 0.993898 |
185 | 2,997,005 – 2,997,125 | - | 3 | 120 | 93.31 | -5.05 | 0.98 | 0.974255 | ||||
59 | Eco_1 | 3,054,044 – 3,054,204 | "known=misc_RNA.35:6S_regulatory_RNA :Eco_1:3054005-3054187" - - "Rfam=BX950851.1/526655-526838_RF00013;6S;|3e-38" "Noncode=n5345,u4032,X01238,ssrS,Escherichia_coli|2e-78" - - - - "ncRNAdb=Ecoli_6S-4-X01238|3e-76" | 186 | 3,054,044 – 3,054,164 | + | 3 | 120 | 98.89 | -2.82 | 1.00 | 0.987959 |
187 | 3,054,044 – 3,054,164 | - | 3 | 120 | 98.89 | -1.63 | 0.96 | 0.634134 | ||||
188 | 3,054,084 – 3,054,204 | + | 3 | 120 | 95.00 | -1.69 | 0.93 | 0.633879 | ||||
189 | 3,054,084 – 3,054,204 | - | 3 | 120 | 95.00 | -1.51 | 0.99 | 0.690065 | ||||
60 | Eco_1 | 3,069,291 – 3,069,419 | - - "RNAmicro=f:3069299_t:3069418_strand:+_p:0.999980" "Rfam=AL627279.1/105836-106061_RF00059;THI;|3e-13" - - - - - - | 190 | 3,069,291 – 3,069,411 | + | 3 | 120 | 86.39 | -3.22 | 0.91 | 0.989701 |
191 | 3,069,291 – 3,069,411 | - | 3 | 120 | 86.39 | -4.99 | 0.90 | 0.960415 | ||||
192 | 3,069,299 – 3,069,419 | + | 3 | 120 | 86.39 | -2.04 | 0.91 | 0.925388 | ||||
193 | 3,069,299 – 3,069,419 | - | 3 | 120 | 86.39 | -4.36 | 0.90 | 0.982923 | ||||
61 | Eco_1 | 3,108,349 – 3,108,464 | "known=tRNA.55:tRNA-Phe :Eco_1:3108388-3108463" "tRNAscan=type:Phe:anticodon:GAA f:3108387_t:3108497_strand=+_cove=75.98" - "Rfam=AJ414142.1/60831-60759_RF00005;tRNA;|2e-35" - - - - - - | 194 | 3,108,349 – 3,108,464 | + | 3 | 115 | 96.52 | -2.14 | 0.96 | 0.906141 |
195 | 3,108,349 – 3,108,464 | - | 3 | 115 | 96.52 | -3.65 | 0.95 | 0.987023 | ||||
62 | Eco_1 | 3,213,590 – 3,213,710 | "known=tRNA.56:tRNA-Ile :Eco_1:3213620-3213695" "tRNAscan=type:Met:anticodon:CAT f:3213619_t:3213720_strand=+_cove=86.32" - "Rfam=U00096.2/3213620-3213692_RF00005;tRNA;|2e-35" - - - - - - | 196 | 3,213,590 – 3,213,710 | + | 3 | 120 | 86.67 | -2.38 | 0.90 | 0.954403 |
197 | 3,213,590 – 3,213,710 | - | 3 | 120 | 86.67 | -1.90 | 0.99 | 0.985919 | ||||
63 | Eco_1 | 3,305,942 – 3,306,062 | - - - - - - - - - - | 198 | 3,305,942 – 3,306,062 | - | 3 | 120 | 96.67 | -2.28 | 0.93 | 0.904044 |
64 | Eco_1 | 3,309,260 – 3,309,437 | "known=misc_RNA.40:unknown_RNA :Eco_1:3309247-3309420" - - "Rfam=AP002564.1/142425-142596_RF00082;SraG;|4e-87" - - - - - "ncRNAdb=Sflex_SraG-8-AE016989|2e-86" | 199 | 3,309,260 – 3,309,380 | - | 3 | 120 | 96.11 | -2.32 | 0.98 | 0.964612 |
200 | 3,309,300 – 3,309,419 | - | 3 | 120 | 95.54 | -2.31 | 0.93 | 0.918401 | ||||
201 | 3,309,318 – 3,309,437 | + | 3 | 120 | 94.99 | -1.88 | 0.92 | 0.711780 | ||||
202 | 3,309,318 – 3,309,437 | - | 3 | 120 | 94.99 | -4.12 | 0.96 | 0.988095 | ||||
65 | Eco_1 | 3,316,235 – 3,316,316 | "known=tRNA.57:tRNA-Met :Eco_1:3316235-3316311" "tRNAscan=type:Met:anticodon:CAT f:3316237_t:3316312_strand=-_cove=61.77" - "Rfam=M21680.1/49-122_RF00005;tRNA;|4e-36" - - - - - - | 203 | 3,316,235 – 3,316,316 | - | 5 | 81 | 97.28 | -1.09 | 0.96 | 0.500000 |
66 | Eco_1 | 3,320,058 – 3,320,190 | "known=tRNA.58:tRNA-Leu :Eco_1:3320094-3320180" "tRNAscan=type:Leu:anticodon:GAG f:3320096_t:3320217_strand=-_cove=52.27" - "Rfam=BX950851.1/773027-773110_RF00005;tRNA;|1e-34" - - - - - - | 204 | 3,320,058 – 3,320,177 | + | 3 | 120 | 96.66 | -4.89 | 0.99 | 0.974978 |
205 | 3,320,058 – 3,320,177 | - | 3 | 120 | 96.66 | -4.43 | 1.01 | 0.990567 | ||||
206 | 3,320,071 – 3,320,190 | + | 3 | 120 | 97.21 | -1.61 | 0.95 | 0.591250 | ||||
207 | 3,320,071 – 3,320,190 | - | 3 | 120 | 97.21 | -2.09 | 0.97 | 0.902366 | ||||
67 | Eco_1 | 3,376,733 – 3,376,850 | - - - - - - - - - - | 208 | 3,376,733 – 3,376,850 | - | 3 | 120 | 91.60 | -1.96 | 0.81 | 0.500000 |
68 | Eco_1 | 3,421,403 – 3,421,516 | - - - "Rfam=AE016770.1/210438-210553_RF00001;5S_rRNA;|2e-32" - - - - - - | 209 | 3,421,403 – 3,421,516 | + | 4 | 120 | 85.94 | -2.12 | 0.71 | 0.854511 |
210 | 3,421,403 – 3,421,516 | - | 4 | 120 | 85.94 | -2.96 | 0.72 | 0.975953 | ||||
69 | Eco_1 | 3,421,600 – 3,421,680 | "known=tRNA.59:tRNA-Thr :Eco_1:3421602-3421677" "tRNAscan=type:Thr:anticodon:GGT f:3421604_t:3421680_strand=-_cove=79.16" - "Rfam=AE016801.1/279765-279837_RF00005;tRNA;|5e-26" - - - - - - | 211 | 3,421,600 – 3,421,680 | + | 4 | 80 | 95.00 | -4.70 | 1.02 | 0.987652 |
212 | 3,421,600 – 3,421,680 | - | 4 | 80 | 95.00 | -3.82 | 1.02 | 0.996944 | ||||
70 | Eco_1 | 3,422,173 – 3,422,293 | "known=rRNA.9:23S_ribosomal_RNA :Eco_1:3421902-3424805" - - - - - - - - - | 213 | 3,422,173 – 3,422,293 | - | 4 | 120 | 97.50 | -1.92 | 0.96 | 0.826453 |
71 | Eco_1 | 3,422,373 – 3,422,585 | "known=rRNA.9:23S_ribosomal_RNA :Eco_1:3421902-3424805" - - - - - - - - - | 214 | 3,422,373 – 3,422,493 | - | 4 | 120 | 92.22 | -2.60 | 0.98 | 0.996926 |
215 | 3,422,413 – 3,422,533 | - | 4 | 120 | 90.42 | -2.49 | 1.05 | 0.998469 | ||||
216 | 3,422,453 – 3,422,573 | - | 4 | 120 | 94.17 | -1.62 | 1.03 | 0.896051 | ||||
217 | 3,422,465 – 3,422,585 | - | 4 | 120 | 94.17 | -1.40 | 0.90 | 0.523606 | ||||
72 | Eco_1 | 3,424,002 – 3,424,280 | "known=rRNA.9:23S_ribosomal_RNA :Eco_1:3421902-3424805" - - - - - - - - - | 218 | 3,424,002 – 3,424,122 | - | 3 | 120 | 92.50 | -3.44 | 1.01 | 0.997669 |
219 | 3,424,122 – 3,424,242 | - | 3 | 120 | 86.94 | -2.06 | 1.05 | 0.998520 | ||||
220 | 3,424,162 – 3,424,280 | - | 3 | 120 | 86.94 | -1.87 | 0.89 | 0.837800 | ||||
73 | Eco_1 | 3,424,979 – 3,425,059 | "known=tRNA.60:tRNA-Ala :Eco_1:3424980-3425055" "tRNAscan=type:Ala:anticodon:TGC f:3424982_t:3425057_strand=-_cove=70.60" - "Rfam=AF373161.1/192-264_RF00005;tRNA;|8e-31" - - - - - - | 221 | 3,424,979 – 3,425,059 | + | 6 | 80 | 86.00 | -1.59 | 0.87 | 0.677572 |
74 | Eco_1 | 3,425,097 – 3,425,170 | "known=tRNA.61:tRNA-Ile :Eco_1:3425098-3425174" "tRNAscan=type:Ile:anticodon:GAT f:3425100_t:3425172_strand=-_cove=48.28" - "Rfam=AP002567.1/65365-65438_RF00005;tRNA;|8e-34" - - - - - - | 222 | 3,425,097 – 3,425,170 | + | 5 | 73 | 88.07 | -1.68 | 0.83 | 0.817983 |
75 | Eco_1 | 3,425,241 – 3,425,401 | "known=rRNA.10:16S_ribosomal_RNA :Eco_1:3425243-3426784" - - "Rfam=Z93981.1/19-411_RF00177;SSU_rRNA_5;|4e-16" - - - - - - | 223 | 3,425,241 – 3,425,361 | - | 5 | 120 | 96.67 | -2.58 | 0.97 | 0.999921 |
224 | 3,425,281 – 3,425,401 | - | 5 | 120 | 96.67 | -1.32 | 1.03 | 0.942716 | ||||
76 | Eco_1 | 3,425,441 – 3,425,800 | "known=rRNA.10:16S_ribosomal_RNA :Eco_1:3425243-3426784" - - "Rfam=Z93956.1/19-543_RF00177;SSU_rRNA_5;|4e-30" - - - - - - | 225 | 3,425,441 – 3,425,561 | - | 5 | 120 | 92.25 | -1.39 | 1.00 | 0.969299 |
226 | 3,425,481 – 3,425,601 | - | 5 | 120 | 91.25 | -2.22 | 1.01 | 0.999891 | ||||
227 | 3,425,521 – 3,425,641 | - | 5 | 120 | 94.67 | -2.08 | 0.97 | 0.999653 | ||||
228 | 3,425,561 – 3,425,680 | - | 5 | 120 | 93.47 | -1.45 | 0.97 | 0.974219 | ||||
229 | 3,425,680 – 3,425,800 | - | 5 | 120 | 91.42 | -1.34 | 1.02 | 0.954037 | ||||
77 | Eco_1 | 3,425,806 – 3,425,926 | "known=rRNA.10:16S_ribosomal_RNA :Eco_1:3425243-3426784" - - "Rfam=AY471685.1/800-1364_RF00177;SSU_rRNA_5;|9e-38" - - - - - - | 230 | 3,425,806 – 3,425,926 | - | 5 | 120 | 98.67 | -1.71 | 0.98 | 0.981670 |
78 | Eco_1 | 3,426,385 – 3,426,705 | "known=rRNA.10:16S_ribosomal_RNA :Eco_1:3425243-3426784" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|6e-168" - - - - - - | 231 | 3,426,385 – 3,426,505 | - | 3 | 120 | 96.67 | -2.66 | 1.02 | 0.991840 |
232 | 3,426,425 – 3,426,545 | - | 3 | 120 | 93.89 | -2.67 | 1.02 | 0.994367 | ||||
233 | 3,426,465 – 3,426,585 | + | 3 | 120 | 86.39 | -2.05 | 0.84 | 0.793593 | ||||
234 | 3,426,465 – 3,426,585 | - | 3 | 120 | 86.39 | -1.75 | 0.94 | 0.917046 | ||||
235 | 3,426,505 – 3,426,625 | - | 3 | 120 | 81.11 | -1.66 | 0.90 | 0.946274 | ||||
236 | 3,426,545 – 3,426,665 | + | 3 | 120 | 82.78 | -1.71 | 0.77 | 0.647085 | ||||
237 | 3,426,545 – 3,426,665 | - | 3 | 120 | 82.78 | -4.94 | 1.01 | 0.980468 | ||||
238 | 3,426,585 – 3,426,705 | - | 3 | 120 | 88.06 | -1.14 | 0.94 | 0.550710 | ||||
79 | Eco_1 | 3,451,293 – 3,451,477 | - - - - - - - - - - | 239 | 3,451,293 – 3,451,413 | - | 3 | 120 | 98.33 | -1.80 | 1.00 | 0.840367 |
240 | 3,451,333 – 3,451,453 | + | 3 | 120 | 94.44 | -2.02 | 0.97 | 0.913444 | ||||
241 | 3,451,333 – 3,451,453 | - | 3 | 120 | 94.44 | -2.16 | 0.99 | 0.958020 | ||||
242 | 3,451,357 – 3,451,477 | + | 3 | 120 | 94.44 | -1.57 | 0.96 | 0.642766 | ||||
243 | 3,451,357 – 3,451,477 | - | 3 | 120 | 94.44 | -2.28 | 0.98 | 0.966998 | ||||
80 | Eco_1 | 3,809,738 – 3,809,856 | - - - - - - - - - - | 244 | 3,809,738 – 3,809,856 | + | 3 | 120 | 97.21 | -2.46 | 0.96 | 0.953661 |
245 | 3,809,738 – 3,809,856 | - | 3 | 120 | 97.21 | -2.77 | 1.01 | 0.991172 | ||||
81 | Eco_1 | 3,939,685 – 3,940,285 | "known=rRNA.11:16S_ribosomal_RNA :Eco_1:3939831-3941372" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|0.0" - - - - - - | 246 | 3,939,685 – 3,939,805 | + | 3 | 120 | 98.33 | -2.39 | 1.00 | 0.969714 |
247 | 3,939,685 – 3,939,805 | - | 3 | 120 | 98.33 | -1.80 | 1.00 | 0.845854 | ||||
248 | 3,939,725 – 3,939,845 | + | 3 | 120 | 97.78 | -2.86 | 1.00 | 0.989904 | ||||
249 | 3,939,765 – 3,939,885 | + | 3 | 120 | 99.44 | -2.20 | 0.98 | 0.926488 | ||||
250 | 3,939,805 – 3,939,925 | + | 3 | 120 | 98.33 | -2.25 | 1.01 | 0.963107 | ||||
251 | 3,939,885 – 3,940,005 | + | 3 | 120 | 98.33 | -1.60 | 1.02 | 0.777989 | ||||
252 | 3,939,925 – 3,940,045 | + | 3 | 120 | 99.44 | -1.57 | 1.01 | 0.723224 | ||||
253 | 3,939,965 – 3,940,085 | + | 3 | 120 | 97.78 | -3.32 | 1.01 | 0.994689 | ||||
254 | 3,940,005 – 3,940,125 | + | 3 | 120 | 97.22 | -2.73 | 0.98 | 0.982911 | ||||
255 | 3,940,085 – 3,940,205 | + | 3 | 120 | 98.89 | -2.25 | 0.94 | 0.886151 | ||||
256 | 3,940,165 – 3,940,285 | + | 3 | 120 | 100.00 | -2.19 | 0.91 | 0.789479 | ||||
257 | 3,939,909 – 3,940,029 | + | 3 | 120 | 82.78 | -1.48 | 0.92 | 0.927722 | ||||
258 | 3,939,949 – 3,940,069 | + | 3 | 120 | 80.28 | -4.68 | 1.02 | 0.992343 | ||||
259 | 3,939,949 – 3,940,069 | - | 3 | 120 | 80.28 | -2.19 | 0.82 | 0.973597 | ||||
260 | 3,939,989 – 3,940,109 | + | 3 | 120 | 79.44 | -1.83 | 0.90 | 0.987436 | ||||
261 | 3,940,029 – 3,940,149 | + | 3 | 120 | 84.44 | -1.60 | 0.89 | 0.796809 | ||||
262 | 3,940,029 – 3,940,149 | - | 3 | 120 | 84.44 | -1.89 | 0.80 | 0.726383 | ||||
263 | 3,940,069 – 3,940,189 | + | 3 | 120 | 93.61 | -2.90 | 0.97 | 0.990734 | ||||
264 | 3,940,109 – 3,940,229 | + | 3 | 120 | 96.11 | -2.97 | 0.97 | 0.987273 | ||||
82 | Eco_1 | 3,940,362 – 3,940,602 | "known=rRNA.11:16S_ribosomal_RNA :Eco_1:3939831-3941372" - - "Rfam=X97595.1/20-506_RF00177;SSU_rRNA_5;|2e-31" - - - - - - | 265 | 3,940,362 – 3,940,482 | + | 3 | 120 | 88.06 | -1.12 | 1.00 | 0.863446 |
266 | 3,940,402 – 3,940,522 | + | 3 | 120 | 84.72 | -1.29 | 0.97 | 0.945273 | ||||
267 | 3,940,482 – 3,940,602 | + | 3 | 120 | 88.89 | -3.55 | 1.01 | 0.998023 | ||||
268 | 3,940,482 – 3,940,602 | - | 3 | 120 | 88.89 | -1.75 | 1.00 | 0.963858 | ||||
83 | Eco_1 | 3,941,754 – 3,941,954 | "known=rRNA.12:23S_ribosomal_RNA :Eco_1:3941727-3944630" - - "Rfam=AJ294423.1/19-165_RF00002;5_8S_rRNA;|3e-11" - - - - - - | 269 | 3,941,754 – 3,941,874 | + | 4 | 120 | 92.92 | -1.92 | 1.03 | 0.980034 |
270 | 3,941,754 – 3,941,874 | - | 4 | 120 | 92.92 | -1.24 | 0.99 | 0.565298 | ||||
271 | 3,941,794 – 3,941,914 | + | 4 | 120 | 91.25 | -3.28 | 1.07 | 0.999515 | ||||
272 | 3,941,794 – 3,941,914 | - | 4 | 120 | 91.25 | -2.28 | 1.00 | 0.994252 | ||||
273 | 3,941,834 – 3,941,954 | + | 4 | 120 | 92.92 | -4.74 | 1.04 | 0.994882 | ||||
274 | 3,941,834 – 3,941,954 | - | 4 | 120 | 92.92 | -2.17 | 1.07 | 0.994015 | ||||
84 | Eco_1 | 3,941,994 – 3,942,114 | "known=rRNA.12:23S_ribosomal_RNA :Eco_1:3941727-3944630" - - - - - - - - - | 275 | 3,941,994 – 3,942,114 | + | 4 | 120 | 92.08 | -2.52 | 0.97 | 0.995944 |
85 | Eco_1 | 3,942,312 – 3,942,792 | "known=rRNA.12:23S_ribosomal_RNA :Eco_1:3941727-3944630" - "RNAmicro=f:3942552_t:3942671_strand:+_p:0.653562" - - - - - - - | 276 | 3,942,312 – 3,942,432 | + | 4 | 120 | 96.81 | -2.32 | 1.01 | 0.973633 |
277 | 3,942,352 – 3,942,472 | + | 4 | 120 | 97.64 | -1.57 | 0.97 | 0.569339 | ||||
278 | 3,942,392 – 3,942,512 | + | 4 | 120 | 99.58 | -3.27 | 1.00 | 0.939461 | ||||
279 | 3,942,432 – 3,942,552 | + | 4 | 120 | 99.58 | -1.91 | 1.00 | 0.670074 | ||||
280 | 3,942,552 – 3,942,672 | - | 4 | 120 | 96.25 | -1.67 | 0.98 | 0.793010 | ||||
281 | 3,942,672 – 3,942,792 | + | 4 | 120 | 99.58 | -1.78 | 0.98 | 0.533321 | ||||
86 | Eco_1 | 3,980,531 – 3,980,610 | "known=tRNA.68:tRNA-His :Eco_1:3980532-3980608" "tRNAscan=type:His:anticodon:GTG f:3980532_t:3980605_strand=+_cove=71.64" - "Rfam=AE014017.1/291180-291108_RF00005;tRNA;|5e-26" - - - - - - | 282 | 3,980,531 – 3,980,610 | + | 3 | 79 | 98.31 | -2.80 | 1.00 | 0.987827 |
283 | 3,980,531 – 3,980,610 | - | 3 | 79 | 98.31 | -4.66 | 1.00 | 0.981554 | ||||
87 | Eco_1 | 3,988,954 – 3,989,044 | - - - - - - - - - - | 284 | 3,988,954 – 3,989,044 | + | 3 | 90 | 99.26 | -1.47 | 1.00 | 0.638158 |
88 | Eco_1 | 3,999,200 – 3,999,398 | - - - - - - - - - - | 285 | 3,999,200 – 3,999,320 | + | 3 | 120 | 97.78 | -1.99 | 0.97 | 0.866690 |
286 | 3,999,200 – 3,999,320 | - | 3 | 120 | 97.78 | -1.50 | 0.98 | 0.604901 | ||||
287 | 3,999,240 – 3,999,358 | + | 3 | 120 | 97.77 | -4.31 | 1.00 | 0.989202 | ||||
288 | 3,999,240 – 3,999,358 | - | 3 | 120 | 97.77 | -3.70 | 0.97 | 0.989826 | ||||
289 | 3,999,280 – 3,999,398 | + | 3 | 120 | 97.77 | -3.63 | 0.99 | 0.993205 | ||||
290 | 3,999,280 – 3,999,398 | - | 3 | 120 | 97.77 | -2.01 | 0.98 | 0.888673 | ||||
89 | Eco_1 | 4,033,408 – 4,034,008 | "known=rRNA.14:16S_ribosomal_RNA :Eco_1:4033554-4035095" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|0.0" - - - - - - | 291 | 4,033,408 – 4,033,528 | + | 3 | 120 | 98.33 | -2.39 | 1.00 | 0.969714 |
292 | 4,033,408 – 4,033,528 | - | 3 | 120 | 98.33 | -1.80 | 1.00 | 0.845854 | ||||
293 | 4,033,448 – 4,033,568 | + | 3 | 120 | 97.22 | -2.79 | 1.01 | 0.991003 | ||||
294 | 4,033,488 – 4,033,608 | + | 3 | 120 | 98.89 | -2.13 | 0.99 | 0.922708 | ||||
295 | 4,033,528 – 4,033,648 | + | 3 | 120 | 96.11 | -1.87 | 1.00 | 0.889779 | ||||
296 | 4,033,648 – 4,033,768 | + | 3 | 120 | 98.89 | -1.35 | 1.00 | 0.543732 | ||||
297 | 4,033,688 – 4,033,808 | + | 3 | 120 | 97.22 | -3.01 | 1.00 | 0.993102 | ||||
298 | 4,033,728 – 4,033,848 | + | 3 | 120 | 96.67 | -2.54 | 0.97 | 0.972469 | ||||
299 | 4,033,808 – 4,033,928 | + | 3 | 120 | 98.89 | -2.25 | 0.94 | 0.886151 | ||||
300 | 4,033,888 – 4,034,008 | + | 3 | 120 | 100.00 | -2.19 | 0.91 | 0.789479 | ||||
301 | 4,033,612 – 4,033,732 | + | 3 | 120 | 86.67 | -1.37 | 0.95 | 0.819383 | ||||
90 | Eco_1 | 4,034,085 – 4,034,325 | "known=rRNA.14:16S_ribosomal_RNA :Eco_1:4033554-4035095" - - "Rfam=X97595.1/20-506_RF00177;SSU_rRNA_5;|2e-31" - - - - - - | 302 | 4,034,085 – 4,034,205 | + | 3 | 120 | 88.06 | -1.12 | 1.00 | 0.863446 |
303 | 4,034,125 – 4,034,245 | + | 3 | 120 | 84.72 | -1.29 | 0.97 | 0.945273 | ||||
304 | 4,034,205 – 4,034,325 | + | 3 | 120 | 88.89 | -3.55 | 1.01 | 0.998023 | ||||
305 | 4,034,205 – 4,034,325 | - | 3 | 120 | 88.89 | -1.75 | 1.00 | 0.963858 | ||||
91 | Eco_1 | 4,035,169 – 4,035,242 | "known=tRNA.71:tRNA-Ile :Eco_1:4035164-4035240" - - "Rfam=AP002567.1/65365-65438_RF00005;tRNA;|1e-32" - - - - - - | 306 | 4,035,169 – 4,035,242 | - | 4 | 73 | 86.25 | -1.82 | 0.83 | 0.839826 |
92 | Eco_1 | 4,035,569 – 4,035,769 | "known=rRNA.15:23S_ribosomal_RNA :Eco_1:4035542-4038446" - - "Rfam=AJ294423.1/19-165_RF00002;5_8S_rRNA;|3e-11" - - - - - - | 307 | 4,035,569 – 4,035,689 | + | 4 | 120 | 92.50 | -1.96 | 1.04 | 0.984654 |
308 | 4,035,569 – 4,035,689 | - | 4 | 120 | 92.50 | -1.35 | 0.95 | 0.631277 | ||||
309 | 4,035,609 – 4,035,729 | + | 4 | 120 | 90.97 | -3.45 | 1.07 | 0.999541 | ||||
310 | 4,035,609 – 4,035,729 | - | 4 | 120 | 90.97 | -2.06 | 0.98 | 0.985750 | ||||
311 | 4,035,649 – 4,035,769 | + | 4 | 120 | 92.64 | -4.52 | 1.02 | 0.996602 | ||||
312 | 4,035,649 – 4,035,769 | - | 4 | 120 | 92.64 | -1.81 | 1.08 | 0.977469 | ||||
93 | Eco_1 | 4,035,809 – 4,035,929 | "known=rRNA.15:23S_ribosomal_RNA :Eco_1:4035542-4038446" - - - - - - - - - | 313 | 4,035,809 – 4,035,929 | + | 4 | 120 | 92.08 | -2.11 | 0.97 | 0.984250 |
94 | Eco_1 | 4,036,127 – 4,036,607 | "known=rRNA.15:23S_ribosomal_RNA :Eco_1:4035542-4038446" - "RNAmicro=f:4036367_t:4036486_strand:+_p:0.653562" - - - - - - - | 314 | 4,036,127 – 4,036,247 | + | 4 | 120 | 96.94 | -2.19 | 1.01 | 0.958866 |
315 | 4,036,167 – 4,036,287 | + | 4 | 120 | 97.78 | -1.82 | 0.97 | 0.766672 | ||||
316 | 4,036,207 – 4,036,327 | + | 4 | 120 | 99.58 | -3.27 | 1.00 | 0.939461 | ||||
317 | 4,036,247 – 4,036,367 | + | 4 | 120 | 99.58 | -1.91 | 1.00 | 0.670074 | ||||
318 | 4,036,367 – 4,036,487 | - | 4 | 120 | 96.25 | -1.67 | 0.98 | 0.793010 | ||||
319 | 4,036,487 – 4,036,607 | + | 4 | 120 | 99.58 | -1.78 | 0.98 | 0.533321 | ||||
95 | Eco_1 | 4,047,899 – 4,048,047 | "known=misc_RNA.46:Spot_42_RNA :Eco_1:4047922-4048030" - - "Rfam=BX950851.1/28750-28867_RF00021;Spot_42;|3e-38" "Noncode=n4475,u3943,L19201,spf,Escherichia_coli|1e-57" - - - - "ncRNAdb=Sflex_Spot42-3-AE016990|6e-62" | 320 | 4,047,899 – 4,048,018 | + | 3 | 120 | 97.77 | -1.95 | 0.94 | 0.777101 |
321 | 4,047,928 – 4,048,047 | + | 3 | 120 | 97.77 | -4.21 | 0.97 | 0.984280 | ||||
322 | 4,047,928 – 4,048,047 | - | 3 | 120 | 97.77 | -4.20 | 0.98 | 0.987154 | ||||
96 | Eco_1 | 4,164,536 – 4,165,136 | "known=rRNA.17:16S_ribosomal_RNA :Eco_1:4164682-4166223" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|0.0" - - - - - - | 323 | 4,164,536 – 4,164,656 | + | 3 | 120 | 98.33 | -2.39 | 1.00 | 0.969714 |
324 | 4,164,536 – 4,164,656 | - | 3 | 120 | 98.33 | -1.80 | 1.00 | 0.845854 | ||||
325 | 4,164,576 – 4,164,696 | + | 3 | 120 | 97.22 | -2.79 | 1.01 | 0.991003 | ||||
326 | 4,164,616 – 4,164,736 | + | 3 | 120 | 98.89 | -2.13 | 0.99 | 0.922708 | ||||
327 | 4,164,656 – 4,164,776 | + | 3 | 120 | 96.67 | -2.04 | 1.03 | 0.957148 | ||||
328 | 4,164,736 – 4,164,856 | + | 3 | 120 | 97.22 | -1.42 | 1.03 | 0.689897 | ||||
329 | 4,164,776 – 4,164,896 | + | 3 | 120 | 99.44 | -1.57 | 1.01 | 0.723224 | ||||
330 | 4,164,816 – 4,164,936 | + | 3 | 120 | 97.78 | -3.17 | 1.01 | 0.994124 | ||||
331 | 4,164,856 – 4,164,976 | + | 3 | 120 | 97.22 | -2.68 | 0.98 | 0.979811 | ||||
332 | 4,164,936 – 4,165,056 | + | 3 | 120 | 98.89 | -2.25 | 0.94 | 0.886151 | ||||
333 | 4,165,016 – 4,165,136 | + | 3 | 120 | 100.00 | -2.19 | 0.91 | 0.789479 | ||||
334 | 4,164,760 – 4,164,880 | + | 3 | 120 | 84.44 | -1.50 | 0.93 | 0.889591 | ||||
335 | 4,164,800 – 4,164,920 | + | 3 | 120 | 80.83 | -4.52 | 1.01 | 0.994246 | ||||
336 | 4,164,800 – 4,164,920 | - | 3 | 120 | 80.83 | -1.92 | 0.85 | 0.946496 | ||||
337 | 4,164,840 – 4,164,960 | + | 3 | 120 | 80.00 | -1.90 | 0.94 | 0.994605 | ||||
338 | 4,164,880 – 4,165,000 | + | 3 | 120 | 85.00 | -1.45 | 0.91 | 0.793563 | ||||
339 | 4,164,880 – 4,165,000 | - | 3 | 120 | 85.00 | -1.81 | 0.81 | 0.667101 | ||||
340 | 4,164,920 – 4,165,040 | + | 3 | 120 | 93.61 | -2.90 | 0.97 | 0.990734 | ||||
341 | 4,164,960 – 4,165,080 | + | 3 | 120 | 96.11 | -2.97 | 0.97 | 0.987273 | ||||
97 | Eco_1 | 4,165,213 – 4,165,453 | "known=rRNA.17:16S_ribosomal_RNA :Eco_1:4164682-4166223" - - "Rfam=X97595.1/20-506_RF00177;SSU_rRNA_5;|2e-31" - - - - - - | 342 | 4,165,213 – 4,165,333 | + | 3 | 120 | 88.06 | -1.12 | 1.00 | 0.863446 |
343 | 4,165,253 – 4,165,373 | + | 3 | 120 | 84.72 | -1.29 | 0.97 | 0.945273 | ||||
344 | 4,165,333 – 4,165,453 | + | 3 | 120 | 88.89 | -3.55 | 1.01 | 0.998023 | ||||
345 | 4,165,333 – 4,165,453 | - | 3 | 120 | 88.89 | -1.75 | 1.00 | 0.963858 | ||||
98 | Eco_1 | 4,166,395 – 4,166,471 | "known=tRNA.73:tRNA-Glu :Eco_1:4166395-4166470" "tRNAscan=type:Glu:anticodon:TTC f:4166395_t:4166466_strand=+_cove=42.83" - "Rfam=U55299.1/85-158_RF00005;tRNA;|1e-32" - - - - - - | 346 | 4,166,395 – 4,166,471 | + | 5 | 76 | 95.00 | -2.75 | 1.00 | 0.999989 |
347 | 4,166,395 – 4,166,471 | - | 5 | 76 | 95.00 | -1.59 | 1.01 | 0.995020 | ||||
99 | Eco_1 | 4,166,691 – 4,166,891 | "known=rRNA.18:23S_ribosomal_RNA :Eco_1:4166664-4169567" - - "Rfam=AJ294423.1/19-165_RF00002;5_8S_rRNA;|3e-11" - - - - - - | 348 | 4,166,691 – 4,166,811 | + | 4 | 120 | 92.92 | -1.92 | 1.03 | 0.980034 |
349 | 4,166,691 – 4,166,811 | - | 4 | 120 | 92.92 | -1.24 | 0.99 | 0.565298 | ||||
350 | 4,166,731 – 4,166,851 | + | 4 | 120 | 91.25 | -3.28 | 1.07 | 0.999515 | ||||
351 | 4,166,731 – 4,166,851 | - | 4 | 120 | 91.25 | -2.28 | 1.00 | 0.994252 | ||||
352 | 4,166,771 – 4,166,891 | + | 4 | 120 | 92.92 | -4.74 | 1.04 | 0.994882 | ||||
353 | 4,166,771 – 4,166,891 | - | 4 | 120 | 92.92 | -2.17 | 1.07 | 0.994015 | ||||
100 | Eco_1 | 4,166,931 – 4,167,051 | "known=rRNA.18:23S_ribosomal_RNA :Eco_1:4166664-4169567" - - - - - - - - - | 354 | 4,166,931 – 4,167,051 | + | 4 | 120 | 92.64 | -2.43 | 0.97 | 0.993967 |
101 | Eco_1 | 4,167,249 – 4,167,729 | "known=rRNA.18:23S_ribosomal_RNA :Eco_1:4166664-4169567" - "RNAmicro=f:4167489_t:4167608_strand:+_p:0.653562" - - - - - - - | 355 | 4,167,249 – 4,167,369 | + | 4 | 120 | 96.81 | -2.32 | 1.01 | 0.973633 |
356 | 4,167,289 – 4,167,409 | + | 4 | 120 | 97.64 | -1.57 | 0.97 | 0.569339 | ||||
357 | 4,167,329 – 4,167,449 | + | 4 | 120 | 99.58 | -3.27 | 1.00 | 0.939461 | ||||
358 | 4,167,369 – 4,167,489 | + | 4 | 120 | 99.58 | -1.91 | 1.00 | 0.670074 | ||||
359 | 4,167,489 – 4,167,609 | - | 4 | 120 | 96.25 | -1.67 | 0.98 | 0.793010 | ||||
360 | 4,167,609 – 4,167,729 | + | 4 | 120 | 99.58 | -1.78 | 0.98 | 0.533321 | ||||
102 | Eco_1 | 4,168,453 – 4,168,571 | "known=rRNA.18:23S_ribosomal_RNA :Eco_1:4166664-4169567" - - - - - - - - - | 361 | 4,168,453 – 4,168,571 | + | 3 | 120 | 92.18 | -2.91 | 0.87 | 0.941084 |
103 | Eco_1 | 4,168,611 – 4,168,731 | "known=rRNA.18:23S_ribosomal_RNA :Eco_1:4166664-4169567" - - - - - - - - - | 362 | 4,168,611 – 4,168,731 | - | 3 | 120 | 97.22 | -1.59 | 0.97 | 0.643040 |
104 | Eco_1 | 4,168,745 – 4,168,865 | "known=rRNA.18:23S_ribosomal_RNA :Eco_1:4166664-4169567" - "RNAmicro=f:4168745_t:4168864_strand:-_p:0.641564" - - - - - - - | 363 | 4,168,745 – 4,168,865 | + | 3 | 120 | 90.56 | -1.19 | 1.05 | 0.892267 |
105 | Eco_1 | 4,173,495 – 4,173,580 | "known=tRNA.75:tRNA-Tyr :Eco_1:4173495-4173579" "tRNAscan=type:Pseudo:anticodon:GTA f:4173495_t:4173575_strand=+_cove=34.59" - "Rfam=X57091.1/249-330_RF00005;tRNA;|3e-40" - - - - - "ncRNAdb=Sente_RtT-9-AE016839|8e-26" | 364 | 4,173,495 – 4,173,580 | + | 6 | 85 | 91.51 | -1.37 | 0.94 | 0.909301 |
365 | 4,173,495 – 4,173,580 | - | 6 | 85 | 91.51 | -1.38 | 0.88 | 0.640954 | ||||
106 | Eco_1 | 4,173,674 – 4,173,858 | "known=tRNA.76:tRNA-Gly :Eco_1:4173696-4173770" "tRNAscan=type:Gly:anticodon:TCC f:4173695_t:4173787_strand=+_cove=63.24" - "Rfam=BX950851.1/250174-250246_RF00005;tRNA;|4e-35" - - - - - - | 366 | 4,173,674 – 4,173,794 | + | 3 | 120 | 82.22 | -1.42 | 0.93 | 0.939456 |
367 | 4,173,674 – 4,173,794 | - | 3 | 120 | 82.22 | -3.21 | 0.92 | 0.997139 | ||||
368 | 4,173,714 – 4,173,834 | - | 3 | 120 | 92.78 | -2.67 | 0.96 | 0.985339 | ||||
369 | 4,173,738 – 4,173,858 | + | 3 | 120 | 90.28 | -2.36 | 0.95 | 0.971937 | ||||
370 | 4,173,738 – 4,173,858 | - | 3 | 120 | 90.28 | -2.97 | 0.93 | 0.985269 | ||||
371 | 4,173,774 – 4,173,856 | + | 4 | 82 | 93.90 | -3.41 | 1.02 | 0.998607 | ||||
372 | 4,173,774 – 4,173,856 | - | 4 | 82 | 93.90 | -4.76 | 1.02 | 0.991503 | ||||
107 | Eco_1 | 4,177,798 – 4,178,019 | - - - - - - - - - - | 373 | 4,177,798 – 4,177,918 | + | 3 | 120 | 95.56 | -2.80 | 1.01 | 0.993284 |
374 | 4,177,798 – 4,177,918 | - | 3 | 120 | 95.56 | -2.38 | 0.94 | 0.941455 | ||||
375 | 4,177,838 – 4,177,958 | + | 3 | 120 | 94.44 | -3.65 | 0.96 | 0.992779 | ||||
376 | 4,177,838 – 4,177,958 | - | 3 | 120 | 94.44 | -3.08 | 0.91 | 0.972238 | ||||
377 | 4,177,878 – 4,177,997 | + | 3 | 120 | 90.53 | -3.43 | 0.88 | 0.976234 | ||||
378 | 4,177,878 – 4,177,997 | - | 3 | 120 | 90.53 | -4.04 | 0.89 | 0.977664 | ||||
379 | 4,177,900 – 4,178,019 | + | 3 | 120 | 90.53 | -3.59 | 0.88 | 0.976221 | ||||
380 | 4,177,900 – 4,178,019 | - | 3 | 120 | 90.53 | -3.13 | 0.83 | 0.938591 | ||||
108 | Eco_1 | 4,178,949 – 4,179,268 | - - "RNAmicro=f:4179069_t:4179188_strand:+_p:0.827701" - - - - - - - | 381 | 4,178,949 – 4,179,069 | + | 3 | 120 | 100.00 | -5.76 | 0.96 | 0.865581 |
382 | 4,178,949 – 4,179,069 | - | 3 | 120 | 100.00 | -5.73 | 1.00 | 0.906145 | ||||
383 | 4,178,989 – 4,179,109 | + | 3 | 120 | 100.00 | -3.80 | 1.00 | 0.989713 | ||||
384 | 4,178,989 – 4,179,109 | - | 3 | 120 | 100.00 | -3.51 | 1.00 | 0.990463 | ||||
385 | 4,179,069 – 4,179,189 | + | 3 | 120 | 97.22 | -3.65 | 0.98 | 0.992563 | ||||
386 | 4,179,069 – 4,179,189 | - | 3 | 120 | 97.22 | -3.49 | 0.93 | 0.980693 | ||||
387 | 4,179,148 – 4,179,268 | + | 3 | 120 | 96.11 | -1.46 | 0.97 | 0.546187 | ||||
109 | Eco_1 | 4,206,024 – 4,206,624 | "known=rRNA.20:16S_ribosomal_RNA :Eco_1:4206170-4207711" - - "Rfam=AF227867.1/12-543_RF00177;SSU_rRNA_5;|0.0" - - - - - - | 388 | 4,206,024 – 4,206,144 | + | 3 | 120 | 99.44 | -2.54 | 1.00 | 0.975159 |
389 | 4,206,024 – 4,206,144 | - | 3 | 120 | 99.44 | -1.59 | 1.00 | 0.718969 | ||||
390 | 4,206,064 – 4,206,184 | + | 3 | 120 | 99.44 | -3.01 | 1.00 | 0.988551 | ||||
391 | 4,206,104 – 4,206,224 | + | 3 | 120 | 100.00 | -2.22 | 1.00 | 0.942316 | ||||
392 | 4,206,144 – 4,206,264 | + | 3 | 120 | 97.78 | -2.05 | 1.02 | 0.949349 | ||||
393 | 4,206,224 – 4,206,344 | + | 3 | 120 | 97.22 | -1.42 | 1.03 | 0.689897 | ||||
394 | 4,206,264 – 4,206,384 | + | 3 | 120 | 99.44 | -1.57 | 1.01 | 0.723224 | ||||
395 | 4,206,304 – 4,206,424 | + | 3 | 120 | 98.33 | -3.21 | 1.01 | 0.993667 | ||||
396 | 4,206,344 – 4,206,464 | + | 3 | 120 | 97.78 | -2.72 | 0.98 | 0.979555 | ||||
397 | 4,206,424 – 4,206,544 | + | 3 | 120 | 98.89 | -2.25 | 0.94 | 0.886151 | ||||
398 | 4,206,504 – 4,206,624 | + | 3 | 120 | 100.00 | -2.19 | 0.91 | 0.789479 | ||||
399 | 4,206,248 – 4,206,368 | + | 3 | 120 | 84.44 | -1.50 | 0.93 | 0.889591 | ||||
400 | 4,206,288 – 4,206,408 | + | 3 | 120 | 80.83 | -4.52 | 1.01 | 0.994246 | ||||
401 | 4,206,288 – 4,206,408 | - | 3 | 120 | 80.83 | -1.92 | 0.85 | 0.946496 | ||||
402 | 4,206,328 – 4,206,448 | + | 3 | 120 | 80.00 | -1.90 | 0.94 | 0.994605 | ||||
403 | 4,206,368 – 4,206,488 | + | 3 | 120 | 85.00 | -1.45 | 0.91 | 0.793563 | ||||
404 | 4,206,368 – 4,206,488 | - | 3 | 120 | 85.00 | -1.81 | 0.81 | 0.667101 | ||||
405 | 4,206,408 – 4,206,528 | + | 3 | 120 | 93.61 | -2.90 | 0.97 | 0.990734 | ||||
406 | 4,206,448 – 4,206,568 | + | 3 | 120 | 96.11 | -2.97 | 0.97 | 0.987273 | ||||
110 | Eco_1 | 4,206,701 – 4,206,941 | "known=rRNA.20:16S_ribosomal_RNA :Eco_1:4206170-4207711" - - "Rfam=X97595.1/20-506_RF00177;SSU_rRNA_5;|2e-31" - - - - - - | 407 | 4,206,701 – 4,206,821 | + | 3 | 120 | 88.06 | -1.12 | 1.00 | 0.863446 |
408 | 4,206,741 – 4,206,861 | + | 3 | 120 | 84.72 | -1.29 | 0.97 | 0.945273 | ||||
409 | 4,206,821 – 4,206,941 | + | 3 | 120 | 88.89 | -3.55 | 1.01 | 0.998023 | ||||
410 | 4,206,821 – 4,206,941 | - | 3 | 120 | 88.89 | -1.75 | 1.00 | 0.963858 | ||||
111 | Eco_1 | 4,208,093 – 4,208,293 | "known=rRNA.21:23S_ribosomal_RNA :Eco_1:4208066-4210969" - - "Rfam=AJ294423.1/19-165_RF00002;5_8S_rRNA;|3e-11" - - - - - - | 411 | 4,208,093 – 4,208,213 | + | 4 | 120 | 92.92 | -1.92 | 1.03 | 0.980034 |
412 | 4,208,093 – 4,208,213 | - | 4 | 120 | 92.92 | -1.24 | 0.99 | 0.565298 | ||||
413 | 4,208,133 – 4,208,253 | + | 4 | 120 | 91.25 | -3.28 | 1.07 | 0.999515 | ||||
414 | 4,208,133 – 4,208,253 | - | 4 | 120 | 91.25 | -2.28 | 1.00 | 0.994252 | ||||
415 | 4,208,173 – 4,208,293 | + | 4 | 120 | 92.92 | -4.74 | 1.04 | 0.994882 | ||||
416 | 4,208,173 – 4,208,293 | - | 4 | 120 | 92.92 | -2.17 | 1.07 | 0.994015 | ||||
112 | Eco_1 | 4,208,333 – 4,208,453 | "known=rRNA.21:23S_ribosomal_RNA :Eco_1:4208066-4210969" - - - - - - - - - | 417 | 4,208,333 – 4,208,453 | + | 4 | 120 | 92.64 | -2.43 | 0.97 | 0.993967 |
113 | Eco_1 | 4,208,651 – 4,209,131 | "known=rRNA.21:23S_ribosomal_RNA :Eco_1:4208066-4210969" - "RNAmicro=f:4208891_t:4209010_strand:+_p:0.653562" - - - - - - - | 418 | 4,208,651 – 4,208,771 | + | 4 | 120 | 96.81 | -2.32 | 1.01 | 0.973633 |
419 | 4,208,691 – 4,208,811 | + | 4 | 120 | 97.64 | -1.57 | 0.97 | 0.569339 | ||||
420 | 4,208,731 – 4,208,851 | + | 4 | 120 | 99.58 | -3.27 | 1.00 | 0.939461 | ||||
421 | 4,208,771 – 4,208,891 | + | 4 | 120 | 99.58 | -1.91 | 1.00 | 0.670074 | ||||
422 | 4,208,891 – 4,209,011 | - | 4 | 120 | 96.25 | -1.67 | 0.98 | 0.793010 | ||||
423 | 4,209,011 – 4,209,131 | + | 4 | 120 | 99.58 | -1.78 | 0.98 | 0.533321 | ||||
114 | Eco_1 | 4,209,855 – 4,209,973 | "known=rRNA.21:23S_ribosomal_RNA :Eco_1:4208066-4210969" - - - - - - - - - | 424 | 4,209,855 – 4,209,973 | + | 3 | 120 | 92.18 | -2.91 | 0.87 | 0.941084 |
115 | Eco_1 | 4,210,013 – 4,210,133 | "known=rRNA.21:23S_ribosomal_RNA :Eco_1:4208066-4210969" - - - - - - - - - | 425 | 4,210,013 – 4,210,133 | - | 3 | 120 | 97.22 | -1.59 | 0.97 | 0.643040 |
116 | Eco_1 | 4,210,147 – 4,210,267 | "known=rRNA.21:23S_ribosomal_RNA :Eco_1:4208066-4210969" - "RNAmicro=f:4210147_t:4210266_strand:-_p:0.641564" - - - - - - - | 426 | 4,210,147 – 4,210,267 | + | 3 | 120 | 90.56 | -1.19 | 1.05 | 0.892267 |
117 | Eco_1 | 4,255,029 – 4,255,138 | - - - - - - - - - - | 427 | 4,255,029 – 4,255,138 | + | 3 | 109 | 83.79 | -1.87 | 0.71 | 0.613569 |
118 | Eco_1 | 4,360,574 – 4,360,674 | "known=tRNA.79:tRNA-Phe :Eco_1:4360574-4360649" "tRNAscan=type:Phe:anticodon:GAA f:4360576_t:4360650_strand=-_cove=75.98" - "Rfam=AJ414142.1/60831-60759_RF00005;tRNA;|2e-35" - - - - - - | 428 | 4,360,574 – 4,360,674 | + | 4 | 100 | 98.00 | -2.35 | 0.97 | 0.936776 |
429 | 4,360,574 – 4,360,674 | - | 4 | 100 | 98.00 | -1.60 | 0.99 | 0.599037 | ||||
119 | Eco_1 | 4,390,381 – 4,390,461 | "known=tRNA.80:tRNA-Gly :Eco_1:4390383-4390458" "tRNAscan=type:Gly:anticodon:GCC f:4390382_t:4390455_strand=+_cove=71.11" - "Rfam=AE008904.1/10704-10776_RF00005;tRNA;|1e-35" - - - - - - | 430 | 4,390,381 – 4,390,461 | + | 6 | 80 | 96.33 | -2.46 | 1.00 | 0.999973 |
431 | 4,390,381 – 4,390,461 | - | 6 | 80 | 96.33 | -2.03 | 1.00 | 0.999883 | ||||
120 | Eco_1 | 4,390,494 – 4,390,573 | "known=tRNA.81:tRNA-Gly :Eco_1:4390495-4390570" "tRNAscan=type:Gly:anticodon:GCC f:4390494_t:4390566_strand=+_cove=71.11" - "Rfam=AE008904.1/10704-10776_RF00005;tRNA;|1e-35" - - - - - - | 432 | 4,390,494 – 4,390,573 | + | 6 | 79 | 96.70 | -2.53 | 1.00 | 0.999976 |
433 | 4,390,494 – 4,390,573 | - | 6 | 79 | 96.70 | -2.09 | 1.00 | 0.999909 | ||||
121 | Eco_1 | 4,390,606 – 4,390,686 | "known=tRNA.82:tRNA-Gly :Eco_1:4390606-4390681" "tRNAscan=type:Gly:anticodon:GCC f:4390606_t:4390675_strand=+_cove=57.72" - "Rfam=AE008904.1/10704-10776_RF00005;tRNA;|6e-35" - - - - - - | 434 | 4,390,606 – 4,390,686 | + | 6 | 80 | 96.16 | -2.38 | 1.00 | 0.999969 |
435 | 4,390,606 – 4,390,686 | - | 6 | 80 | 96.16 | -1.87 | 1.01 | 0.999840 | ||||
122 | Eco_1 | 4,494,393 – 4,494,513 | "known=tRNA.83:tRNA-Leu :Eco_1:4494428-4494512" "tRNAscan=type:Leu:anticodon:CAA f:4494427_t:4494542_strand=+_cove=53.00" - "Rfam=M10747.1/264-345_RF00005;tRNA;|2e-38" - - - - - - | 436 | 4,494,393 – 4,494,513 | + | 3 | 120 | 100.00 | -1.78 | 0.95 | 0.694070 |
123 | Eco_1 | 4,604,312 – 4,604,472 | "known=tRNA.86:tRNA-Leu :Eco_1:4604338-4604424" "tRNAscan=type:Leu:anticodon:CAG f:4604340_t:4604451_strand=-_cove=53.82" - "Rfam=AL627284.1/46512-46429_RF00005;tRNA;|5e-34" - - - - - - | 437 | 4,604,312 – 4,604,432 | + | 3 | 120 | 98.89 | -2.01 | 0.94 | 0.806198 |
438 | 4,604,352 – 4,604,472 | + | 3 | 120 | 97.78 | -2.22 | 0.93 | 0.864560 |
Generated by rnazIndex.pl (part of RNAz 1.0) on Fri Dec 1 16:41:24 2006