| Sequence ID | Eco_1 |
|---|---|
| Location | 4,390,494 – 4,390,573 |
| Length | 79 |
| Max. P | 0.981877 |
| Location | 4,390,494 – 4,390,573 |
|---|---|
| Length | 79 |
| Sequences | 6 |
| Columns | 79 |
| Reading direction | reverse |
| Mean pairwise identity | 96.70 |
| Mean single sequence MFE | -26.12 |
| Consensus MFE | -25.48 |
| Energy contribution | -25.23 |
| Covariance contribution | -0.25 |
| Combinations/Pair | 1.09 |
| Mean z-score | -1.28 |
| Structure conservation index | 0.98 |
| SVM decision value | 1.90 |
| SVM RNA-class probability | 0.981877 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>Eco_1 4390494 79 - 1 UCCCUGUGCCAUUCCUCAGCUUGUCGACAGGCAAGCACGCGGAAGAAUAUGCCAGCUCAAGGCCUGGGACACGGUCCUU .((.(((.(((((((.(.(((((((....)))))))..).))))......(((.......))).))).))).))..... ( -26.40) >Hin_1 1 78 - 1 UCCCUGUGCCAUUCCUCAGCUUGUCGACAGGCAAGCGCGCGGAAGAAUAUGCCAGCUCAAGGCCUGGGACACGGUCCU- .((.(((.(((((((.(.(((((((....)))))))..).))))......(((.......))).))).))).))....- ( -28.00) >Lpn_1 1 78 - 1 UCCCUGUGCCAUUCCUCAACUUGUCGACAGGCAAGUACGCGGAAGAAUAUAUCAGCUCAAGGCCUGGGACACGGUCCU- ((((.(.(((.((((.(.(((((((....)))))))..).))))((.....)).......)))).)))).........- ( -23.20) >Sfl_1 1 79 - 1 UCCCUGUGCCAUUCCUCAGCUUGUCGACAGGCAAGCACGCGGAAGAAUAUGCCAGCUCAAGGCCUGGGACACGGUCCUU .((.(((.(((((((.(.(((((((....)))))))..).))))......(((.......))).))).))).))..... ( -26.40) >Sty_1 1 78 - 1 UCCCUGUGCCAUUCCUCAGCUUGUCGACAGGCAAGCACGCGGAAGAAUAUGCCAGCUCAAGGCCUGGGACACGGUCCU- .((.(((.(((((((.(.(((((((....)))))))..).))))......(((.......))).))).))).))....- ( -26.40) >Ype_1 1 78 - 1 -CCCUGUGCCAUUCCUCAGCUUGUCGACAGGCAAGCACGCGGAAGAAUAUGCCAGCUCAAGGCCUGGGACACGGUCCUU -((.(((.(((((((.(.(((((((....)))))))..).))))......(((.......))).))).))).))..... ( -26.30) >consensus UCCCUGUGCCAUUCCUCAGCUUGUCGACAGGCAAGCACGCGGAAGAAUAUGCCAGCUCAAGGCCUGGGACACGGUCCU_ .((.(((.(((((((.(.(((((((....)))))))..).))))......(((.......))).))).))).))..... (-25.48 = -25.23 + -0.25)
Generated by rnazCluster.pl (part of RNAz 1.0) on Thu Dec 7 14:13:06 2006