Index

Locus IDSeq. IDLocationCustom annotationWindow IDLocationStrandNLengthMean pairwise IDzSCIP
1Banth.020,067 – 20,306-
"AE017334.2/4195535-4195299_RF00230;T-box;|1e-07"
- 		120,067 – 20,306+ 526558.92 -4.220.570.996597
220,067 – 20,306- 526558.92 -3.920.450.997110
2Banth.025,040 – 25,428"n4287,u3790,D11412,scr,Bacillus_thuringiensis|1e-131"
"AE017334.2/25228-25330_RF00169;SRP_bact;|1e-52"
"AL009126|:26377-26730|small|2e-79" 		325,040 – 25,384+ 636278.93 -2.080.890.953801
425,384 – 25,428+ 54962.28 -5.690.310.916773
525,384 – 25,428- 54962.28 -4.160.150.781370
3Banth.030,764 – 30,994-
"AF514303.1/2-71_RF00005;tRNA;|7e-28"
"AE017194|:4649176-4649252|Ile|4e-39" 		630,764 – 30,994+ 625779.77 -1.720.860.892447
730,764 – 30,994- 625779.77 -2.190.830.944898
4Banth.033,995 – 34,164-
"AE017334.2/250877-250992_RF00001;5S_rRNA;|7e-61"
"AE017194|:335446-335561|5S|1e-62" 		833,995 – 34,164+ 617177.38 -3.070.950.974764
933,995 – 34,164- 617177.38 -2.310.890.973143
5Banth.084,027 – 84,076-
-
- 		1084,027 – 84,076+ 54968.12 -3.950.510.999849
1184,027 – 84,076- 54968.12 -4.180.580.999730
6Banth.087,091 – 87,209-
"AE017334.2/250877-250992_RF00001;5S_rRNA;|5e-61"
"AE017194|:335446-335561|5S|9e-63" 		1287,091 – 87,209+ 611888.36 -1.360.970.916980
7Banth.0120,748 – 120,955-
-
- 		13120,748 – 120,955+ 624067.33 -1.900.420.888019
14120,748 – 120,955- 624067.33 -2.200.340.926607
8Banth.0150,188 – 150,313-
"AE017334.2/250877-250992_RF00001;5S_rRNA;|3e-53"
"AE016879|:537148-537263|5S|1e-62" 		15150,188 – 150,313+ 614979.26 -1.350.950.801032
9Banth.0150,318 – 150,485-
"AE017280.1/33125-33054_RF00005;tRNA;|1e-34"
"AE017194|:4649094-4649168|Asx|4e-38" 		16150,318 – 150,485+ 619867.12 -1.781.050.976495
17150,318 – 150,485- 619867.12 -3.371.030.930918
10Banth.0157,536 – 157,673-
"AE017334.2/157527-157682_RF00234;glmS;|2e-73"
- 		18157,536 – 157,673+ 414973.37 -3.210.760.999974
19157,536 – 157,673- 414973.37 -1.700.660.890114
11Banth.0245,003 – 245,259-
"AE017013.1/267945-267858_RF00005;tRNA;|6e-44"
"AE017194|:4648996-4649086|Ser|2e-47" 		20245,003 – 245,164- 316991.18 -1.650.950.777468
21245,164 – 245,259+ 512081.74 -1.410.940.649771
12Banth.0250,997 – 251,083-
"AE009325.1/4528-4601_RF00005;tRNA;|3e-24"
"AE017194|:824151-824227|Met|1e-39" 		22250,997 – 251,083+ 614569.07 -1.720.960.982323
23250,997 – 251,083- 614569.07 -1.750.860.986690
13Banth.0258,435 – 258,535-
-
- 		24258,435 – 258,535+ 611067.18 -1.950.340.781814
25258,435 – 258,535- 611067.18 -2.690.420.995777
14Banth.0284,749 – 284,872-
"AE017334.2/250877-250992_RF00001;5S_rRNA;|5e-61"
"AE017194|:335446-335561|5S|1e-62" 		26284,749 – 284,872+ 412584.01 -1.730.920.894385
15Banth.0289,956 – 290,091-
-
"AL009126|:166498-168051|ribosomal|4e-10" 		27289,956 – 290,091+ 419162.40 -2.960.350.841318
28289,956 – 290,091- 419162.40 -1.880.430.721254
16Banth.0294,722 – 294,846-
"AE017334.2/250877-250992_RF00001;5S_rRNA;|5e-61"
"AE017194|:335446-335561|5S|1e-62" 		29294,722 – 294,846+ 620170.73 -1.510.890.983834
30294,722 – 294,846- 620170.73 -0.360.840.703536
17Banth.0295,344 – 295,423-
"AY224385.1/13434-13535_RF00167;Purine;|4e-39"
- 		31295,344 – 295,423+ 67978.90 -2.261.030.979774
32295,344 – 295,423- 67978.90 -1.510.910.871829
18Banth.0320,603 – 320,780-
"AE017025.1/30636-30742_RF00162;S_box;|6e-43"
- 		33320,603 – 320,780+ 420165.93 -4.930.600.999751
34320,603 – 320,780- 420165.93 -4.410.490.999476
19Banth.0370,947 – 371,141-
"AE017334.2/371129-371017_RF00162;S_box;|5e-59"
- 		35370,947 – 371,141+ 519964.00 -2.600.440.992896
36370,947 – 371,141- 519964.00 -3.460.480.999171
20Banth.0509,385 – 509,534-
-
- 		37509,385 – 509,425+ 34063.33 -0.840.660.542264
38509,425 – 509,534+ 414072.14 -3.460.800.999984
39509,425 – 509,534- 414072.14 -1.800.790.990169
21Banth.0537,268 – 537,599-
"AE017334.2/537349-537437_RF00005;tRNA;|2e-44"
"AE017194|:609852-609943|Ser|6e-48" 		40537,268 – 537,599+ 640580.57 -1.830.830.884404
41537,268 – 537,599- 640580.57 -2.040.810.912879
22Banth.0537,910 – 537,977-
"AE017266.1/34714-34786_RF00005;tRNA;|3e-27"
"AE017194|:4649433-4649508|Thr|8e-31" 		42537,910 – 537,977+ 67290.10 -1.900.900.945548
23Banth.0538,553 – 538,640-
"K01389.1/1896-1977_RF00005;tRNA;|1e-33"
"AE017194|:611058-611142|Leu|2e-44" 		43538,553 – 538,640+ 69878.62 -3.460.650.988300
44538,553 – 538,640- 69878.62 -1.930.650.901482
24Banth.0741,405 – 741,570-
-
"AL009126|:166498-168051|ribosomal|4e-10" 		45741,405 – 741,463+ 56161.37 -3.270.300.954071
46741,463 – 741,570+ 421950.65 -3.780.230.741511
25Banth.0746,424 – 746,830-
"AY224388.1/6075-6155_RF00005;tRNA;|8e-35"
"AE017194|:823328-823408|Leu|3e-41" 		47746,424 – 746,744+ 557554.61 -2.800.490.999233
48746,424 – 746,744- 557554.61 -3.050.470.999270
49746,744 – 746,830+ 48873.18 -1.711.080.999806
50746,744 – 746,830- 48873.18 -1.181.050.999627
26Banth.0747,188 – 747,289-
"AE017280.1/33841-33752_RF00005;tRNA;|8e-41"
"AE017194|:823887-823979|Ser|4e-49" 		51747,188 – 747,289- 310189.44 -1.330.970.751017
27Banth.0752,275 – 752,425-
"AE017334.2/752272-752375_RF00059;THI;|9e-51"
- 		52752,275 – 752,361- 59776.37 -1.820.520.651329
53752,361 – 752,425+ 46663.09 -4.250.600.999819
54752,361 – 752,425- 46663.09 -4.480.550.999511
28Banth.0824,025 – 824,181-
"AE017267.1/64114-64220_RF00080;yybP-ykoY;|1e-49"
- 		55824,025 – 824,181+ 316880.89 -7.360.830.892391
56824,025 – 824,181- 316880.89 -4.910.870.992141
29Banth.0877,387 – 877,479-
-
- 		57877,387 – 877,479+ 39668.66 -2.020.730.999899
58877,387 – 877,479- 39668.66 -1.780.680.998518
30Banth.01,422,570 – 1,422,698-
"AE017355.1/1447059-1447198_RF00050;RFN;|5e-61"
- 		591,422,570 – 1,422,698- 616271.12 -1.420.690.939991
31Banth.01,489,043 – 1,489,498"n4626,u4071,M19021,rnpB,Geobacillus_stearothermophilus|8e-31"
"AE017355.1/1513358-1513751_RF00011;RNaseP_bact_b;|0.0"
"AL009126|:2330517-2330917|RNA|1e-21" 		601,489,043 – 1,489,498+ 649373.95 -7.070.590.919812
611,489,043 – 1,489,498- 649373.95 -4.960.490.997812
32Banth.01,510,394 – 1,510,558-
"AE017269.1/221497-221662_RF00380;ykoK;|2e-86"
- 		621,510,394 – 1,510,558+ 618678.31 -2.530.850.972489
631,510,394 – 1,510,558- 618678.31 -1.850.620.852142
33Banth.02,469,727 – 2,469,923-
"AE017334.2/2469860-2470135_RF00230;T-box;|9e-104"
- 		642,469,727 – 2,469,923+ 322471.58 -2.080.660.998725
34Banth.02,469,959 – 2,470,010-
"AE017334.2/2469860-2470135_RF00230;T-box;|1e-22"
- 		652,469,959 – 2,470,010+ 56163.42 -5.990.700.949388
662,469,959 – 2,470,010- 56163.42 -4.810.540.995847
35Banth.03,091,538 – 3,091,693-
"AE017355.1/3170761-3170663_RF00162;S_box;|5e-46"
- 		673,091,538 – 3,091,693+ 418767.52 -2.830.400.967240
683,091,538 – 3,091,693- 418767.52 -2.540.430.960465
36Banth.03,133,268 – 3,133,344-
"AE017334.2/3133612-3133388_RF00230;T-box;|2e-37"
- 		693,133,268 – 3,133,344+ 69064.86 -3.120.670.982866
703,133,268 – 3,133,344- 69064.86 -4.780.850.903150
37Banth.03,409,453 – 3,409,503-
-
- 		713,409,453 – 3,409,503+ 45466.04 -0.250.800.539404
38Banth.03,795,570 – 3,795,718-
-
- 		723,795,570 – 3,795,676+ 611479.21 -3.780.540.990767
733,795,570 – 3,795,676- 611479.21 -3.080.620.979814
743,795,676 – 3,795,718+ 55960.57 -4.110.580.997029
753,795,676 – 3,795,718- 55960.57 -3.590.710.989035
39Banth.03,859,265 – 3,859,395-
"AE017355.1/3839045-3839233_RF00174;Cobalamin;|8e-60"
- 		763,859,265 – 3,859,395+ 414076.54 -1.310.860.815310
40Banth.04,131,099 – 4,131,150-
-
- 		774,131,099 – 4,131,150+ 65176.34 -4.410.860.938118
784,131,099 – 4,131,150- 65176.34 -2.890.930.974993
41Banth.04,195,182 – 4,195,430-
"AE017334.2/4195535-4195299_RF00230;T-box;|2e-126"
- 		794,195,182 – 4,195,430+ 631460.95 -2.250.440.974972
804,195,182 – 4,195,430- 631460.95 -2.680.470.990307
42Banth.04,210,680 – 4,210,933-
"AE017334.2/4211052-4210807_RF00230;T-box;|1e-137"
- 		814,210,680 – 4,210,933+ 427669.17 -3.090.480.999068
824,210,680 – 4,210,933- 427669.17 -2.540.690.999844
43Banth.04,235,084 – 4,235,154-
-
- 		834,235,084 – 4,235,154+ 37376.85 -4.330.850.999800
844,235,084 – 4,235,154- 37376.85 -4.270.990.999194
44Banth.04,266,172 – 4,266,423-
"AE017038.1/176480-176232_RF00230;T-box;|4e-134"
- 		854,266,172 – 4,266,423+ 526565.34 -2.720.550.998386
864,266,172 – 4,266,423- 526565.34 -3.300.670.998744
45Banth.04,553,493 – 4,553,689-
"AE017334.2/4553811-4553690_RF00162;S_box;|2e-64"
- 		874,553,493 – 4,553,689+ 622064.82 -3.220.340.995776
884,553,493 – 4,553,689- 622064.82 -2.890.420.995978
46Banth.04,651,085 – 4,651,176-
"AF074839.1/52-124_RF00005;tRNA;|2e-25"
"AE017194|:30850-30925|Ala|8e-38" 		894,651,085 – 4,651,176+ 410882.95 -1.400.920.726968
904,651,085 – 4,651,176- 410882.95 -1.270.980.838592
47Banth.04,834,385 – 4,834,737"n4237,u3751,AY491433,tmRNA,Bacillus_thuringiensis|1e-177"
"AE017040.1/163093-162742_RF00023;tmRNA;|0.0"
"BA000004|:3652245-3652598|small|7e-17" 		914,834,385 – 4,834,737- 637573.41 -2.030.690.986635
48Banth.04,953,330 – 4,953,508-
"AE017355.1/4959383-4959268_RF00059;THI;|2e-58"
- 		924,953,330 – 4,953,508+ 524060.16 -3.490.410.995663
934,953,330 – 4,953,508- 524060.16 -3.530.490.998266
49Banth.05,206,672 – 5,206,963"n1931,u1824,AF443972,rnpB,Methanobacterium_formicicum|4e-10"
"AY224386.1/6263-6335_RF00005;tRNA;|6e-35"
"AE017194|:5203788-5203863|Asx|2e-38" 		945,206,672 – 5,206,963+ 636572.23 -2.360.790.991749
955,206,672 – 5,206,963- 636572.23 -2.430.780.992393
50Banth.05,206,969 – 5,207,046-
"L36472.1/2522-2594_RF00005;tRNA;|3e-21"
"CP000002|:4187419-4187494|Lys|4e-39" 		965,206,969 – 5,207,046+ 57798.83 -3.881.000.999874
975,206,969 – 5,207,046- 57798.83 -3.380.990.999902
51Bcere.01,389,507 – 1,389,582-
"AE017334.2/1232672-1232600_RF00005;tRNA;|3e-33"
"AE017194|:1389510-1389582|Val|3e-37" 		981,389,507 – 1,389,582+ 67685.27 -1.630.950.892445
991,389,507 – 1,389,582- 67685.27 -2.651.040.999466
52Bcere.01,849,394 – 1,849,552-
-
- 		1001,849,394 – 1,849,552+ 416166.25 -2.640.540.999330
53Bcere.03,064,250 – 3,064,332-
-
- 		1013,064,250 – 3,064,332+ 48275.20 -3.420.750.999970
1023,064,250 – 3,064,332- 48275.20 -2.130.670.985168
54Bcere.04,650,670 – 4,650,839-
"AE017266.1/34714-34786_RF00005;tRNA;|2e-30"
"AE017194|:4650726-4650801|Thr|1e-38" 		1034,650,670 – 4,650,839+ 419872.24 -1.890.800.994410
55Bcere.04,764,047 – 4,764,120-
-
- 		1044,764,047 – 4,764,120+ 37373.97 -4.960.800.999924
1054,764,047 – 4,764,120- 37373.97 -4.550.880.999929
56Bcere.04,986,104 – 4,986,227-
-
- 		1064,986,104 – 4,986,227- 412571.66 -2.420.900.999675
57Bsubt.0194,533 – 194,619-
"BX571856.1/2034311-2034240_RF00005;tRNA;|4e-30"
"AL009126|:194536-194610|Gln|2e-38" 		107194,533 – 194,619+ 38889.66 -2.350.970.982365
108194,533 – 194,619- 38889.66 -1.450.970.792385
58Bsubt.0951,631 – 951,691-
"AE017355.1/527004-527084_RF00005;tRNA;|3e-20"
"CP000002|:926249-926333|Tyr|3e-24" 		109951,631 – 951,691+ 610564.27 -1.320.870.936546
110951,631 – 951,691- 610564.27 -1.760.920.956771
59Bsubt.02,548,606 – 2,548,912-
"Z99116.2/139688-139587_RF00504;gcvT;|3e-52"
- 		1112,548,606 – 2,548,912+ 335864.36 -2.790.480.999532
1122,548,606 – 2,548,912- 335864.36 -3.710.500.999985
60Bsubt.02,607,929 – 2,608,025-
"Z99116.2/198976-198777_RF00230;T-box;|3e-49"
- 		1132,607,929 – 2,608,025+ 49969.69 -4.440.520.999885
1142,607,929 – 2,608,025- 49969.69 -6.100.690.997328
61Bsubt.02,896,109 – 2,896,401-
"M87009.1/369-630_RF00230;T-box;|1e-147"
- 		1152,896,109 – 2,896,401+ 433057.31 -3.240.330.847967
1162,896,109 – 2,896,401- 433057.31 -5.030.450.976777
62Bsubt.03,171,004 – 3,171,279-
"Z99106.2/112576-112663_RF00005;tRNA;|2e-41"
"AL009126|:3171023-3171113|Ser|2e-47" 		1173,171,004 – 3,171,113+ 611168.13 -0.810.810.901965
1183,171,004 – 3,171,113- 611168.13 -1.511.040.977171
1193,171,113 – 3,171,279+ 628562.88 -3.130.690.964322
1203,171,113 – 3,171,279- 628562.88 -2.160.760.947246
63Bsubt.03,363,369 – 3,363,530-
"Z99120.2/150201-150095_RF00162;S_box;|2e-55"
- 		1213,363,369 – 3,363,530+ 518764.21 -2.620.410.990852
1223,363,369 – 3,363,530- 518764.21 -3.490.560.999236
64Bsubt.04,153,752 – 4,153,801-
-
- 		1234,153,752 – 4,153,801- 35653.70 -3.280.750.999987

Generated by rnazIndex.pl (part of RNAz 1.0pre) on Mon Jun 26 17:07:14 2006