Publications - Supplemental material

Please find below supplemental material corresponding to publications of our group. Currently, we list 133 supplements. If you have problems accessing electronic information, please let us know:

©NOTICE: All documents are copyrighted by the authors; If you would like to use all or a portion of any paper, please contact the author.

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Bioinformatics supplemental material 2012

BIOINF 12-025: 2D meets 4G: G-Quadruplexes in RNA Secondary Structure Prediction

Ronny Lorenz, Stephan H. Bernhart, Jing Qin, Christian Höner zu Siederdissen, Andrea Tanzer, Fabian Amman, Ivo L. Hofacker, Peter F. Stadler
[ Supplemental Material ]

BIOINF 12-023: Identification of new protein coding sequences and signal peptidase cleavage sites of Helicobacter pylori strain 26695 by proteogenomics

Stephan A. Müller, Sven Findeiß, Sandy R. Pernitzsch, Dirk K. Wissenbach, Peter F. Stadler, Ivo L. Hofacker, Martin von Bergen, Stefan Kalkhof
[ Supplemental Material ]

BIOINF 12-022: Matching of Soulmates: Coevolution of SnoRNAs and Their Targets

Stephanie Kehr, Sebastian Bartschat, Hakim Tafer, Peter F. Stadler, Jana Hertel
[ Supplemental Material ]

BIOINF 12-019: Structural networks in metazoan mitochondrial tRNAs

Frank Jühling, Joern Pütz, Peter F. Stadler, Catherine Florentz
[ Supplemental Material ]

BIOINF 12-018: Folding RNA/DNA hybrid duplexes

Ronny Lorenz, Ivo L Hofacker, Stephan H Bernhart
[ Supplemental Material ]

BIOINF 12-016: Detection of differentially expressed segments in tiling array data

Otto C, Reiche K, Hackermüller J
[ Supplemental Material ]

BIOINF 12-015: Fast and sensitive mapping of bisulfite-treated sequencing data

Otto C, Stadler PF, Hoffmann S
[ Supplemental Material ]

BIOINF 12-014: Armless Mitochondrial tRNAs in Enoplea (Nematoda)

Frank Jühling, Joern Pütz, Catherine Florentz, Peter F. Stadler
[ Supplemental Material ]

BIOINF 12-010: Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements

Jühling F, Pütz J, Bernt M, Donath A, Middendorf M, Florentz C, Stadler PF
[ Supplemental Material ]

BIOINF 12-006: RNA Folding Algorithms with G-Quadruplexes

Ronny Lorenz, Stephan H. Bernhart, Fabian Externbrink, Jing Qin, Christian Höner zu Siederdissen, Fabian Amman, Ivo L. Hofacker, Peter F. Stadler
[ Supplemental Material ]

BIOINF 12-004: Genomic and Morphological Evidence Converge to Resolve the Enigma of Strepsiptera

Oliver Niehuis*, Gerrit Hartig*, Sonja Grath*, Hans Pohl, Jörg Lehmann, Hakim Tafer, Alexander Donath, Veiko Krauss, Carina Eisenhardt, Jana Hertel, Malte Petersen, Christoph Mayer, Karen Meusemann, Ralph S. Peters, Peter F. Stadler, Rolf G. Beutel, Erich Bornberg-Bauer, Duane D. McKenna, Bernhard Misof
[ Supplemental Material ]

BIOINF 12-002: A global genome segmentation method for exploration of epigenetic patterns

Lydia Steiner, Lydia Hopp, Henry Wirth, Jörg Galle, Hans Binder, Sonja J Prohaska, Thimo Rohlf
[ Supplemental Material ]

BIOINF 12-001: Comparison of splice sites reveals that long non-coding RNAs are evolutionarily well conserved

Anne Nitsche, Dominic Rose, Mario Fasold, Kristin Reiche, and Peter F. Stadler
[ Supplemental Material ]