Publications - Supplemental material
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BIOINF 12-002: A global genome segmentation method for exploration of epigenetic patterns
Supplemental files
Varying the relative contribution of the coverage part of the EP
The ES-segmentation SOMs are recalculated with several weights for the coverage part of the EPs to show the impact on the resulting SOM structure. [pdf]
Parameter validation for the SOM
The arbitrary parameters for the training procedure, i.e. width and height of the SOM, are altered to determine the correct size of SOM. Resulting SOM-atlases for both segmentations and different parameter values are shown. [pdf]
Additional SOM images for ES-segmentation
Chromosomal-specific population map and chromosomal enrichment maps for ES-segmentation are shown for all chromosome in the mouse genome. [pdf]
Additional SOM images for EV-segmentation
Chromosomal-specific population map and chromosomal enrichment maps for EV-segmentation are shown for all chromosome in the mouse genome. [pdf]