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BIOINF 10-026: Genome Size and DNA Methzlation Rate are positively correlated in Metazoans
Marcus Lechner, Manja Marz, Christian Ihling, Andrea Sinz, Peter F. Stadler, Veiko Krauss
Mapping: abbreviations to species [TSV]
Correlation of cytosine methylation and genome size
Correlation of GC content and CG depletion / etaCG
Independent Contrasts analysis
- IDs of the underlying ssu ribosomal sequences [TXT] (taken from http://www.arb-silva.de/)
- Resulting alignment (trimmed to 50%+ sites only) [FASTA]
- Genomes: eta and sizes with approximated branch lengths (by PhyML, HKY85 model) [NEXUS] (Mesquite with PDAP Plugin required!)
Genome Databases
Figure 1
- Metazoa genome size, eta [TSV]
Figure 2
Figure 3
Figure 4
- a)
- b)
Figure 5
- a)
- eta: ESTs and genomes [TSV]
- b)
- eta: ncRNAs and genomes [TSV]
Figure 6
- eta: 5'- and 3'UTRs [TSV]
Figure 7
Mapping: abbreviations to species [TSV]