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BIOINF 10-037: Intra-genic Exon Duplications in the Human Transcriptome
Anke Busch, Peter F. Stadler
Supplemental File 1.
Correlation between relative size and similarity of the duplicate exons. [PDF] Supplemental File 2.
Correlation of the fraction of duplicated exons in paralogous exon groups [PDF] Supplemental File 3.
Complete tables of exon duplication patterns [PDF] Supplemental File 4.
List of all large exon groups with more than 80 exons. [PDF] Supplemental File 5.
List of significant GO terms characterizing exon groups depending on their maximal copy number of the same exon as well as on their general fraction of duplicated exons. [PDF] Supplemental File 6.
Examples of problems in RefSeq gene annotation. a) identical gene location but different gene names; b) different gene locations of the same gene (e.g. in case of gene duplications); c) identical gene names referring to several distinct but overlapping exons. [PDF]
Summary of all exon groups
[txt]
Detailed data
[link]
Supplemental Figures and Tables
Correlation between relative size and similarity of the duplicate exons. [PDF]
Correlation of the fraction of duplicated exons in paralogous exon groups [PDF]
Complete tables of exon duplication patterns [PDF]
List of all large exon groups with more than 80 exons. [PDF]
List of significant GO terms characterizing exon groups depending on their maximal copy number of the same exon as well as on their general fraction of duplicated exons. [PDF]
Examples of problems in RefSeq gene annotation. a) identical gene location but different gene names; b) different gene locations of the same gene (e.g. in case of gene duplications); c) identical gene names referring to several distinct but overlapping exons. [PDF]