Publications - Published papers
Please find below publications of our group. Currently, we list 565 papers. Some of the publications are in collaboration with the group of Sonja Prohaska and are also listed in the publication list for her individual group. Access to published papers (
) is restricted to our local network and chosen collaborators.
If you have problems accessing electronic information, please let us know:
) is restricted to our local network and chosen collaborators.
If you have problems accessing electronic information, please let us know:©NOTICE: All papers are copyrighted by the authors; If you would like to use all or a portion of any paper, please contact the author.
Animal snoRNAs and scaRNAs with exceptional structures
Manja Marz, Andreas R. Gruber, Christian Höner zu Siederdissen, Fabian Amman, Stefan Badelt, Sebastian Bartschat, Stephan H. Bernhart, Wolfgang Beyer, Stephanie Kehr, Ronny Lorenz, Andrea Tanzer, Dilmurat Yusuf, Hakim Tafer, Ivo L. Hofacker and Peter F. Stadler
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PREPRINT 11-028:
Status: Published
RNA Biology 8:6, 938-946; November/December 2011
Abstract
The overwhelming majority of small
nucleolar RNAs (snoRNAs) fall into
two clearly defined classes characterized
by distinctive secondary structures and
sequence motifs. A small group of diverse
ncRNAs, however, shares the hallmarks
of one or both classes of snoRNAs but
differs substantially from the norm in
some respects. Here, we compile the
available information on these exceptional
cases, conduct a thorough homology
search throughout the available
metazoan genomes, provide improved
and expanded alignments, and investigate
the evolutionary histories of these
ncRNA families as well as their mutual
relationships.
Keywords
box C/D, boxH/ACA, scaRNA, evolution, secondary structure