Installation instructions

RNAstrand uses the GNU configuration and installation system:

cd /somedir/RNAstrand-2.0.0
./configure
make
make install (as root)

This installs the RNAstrand files into /usr/local/bin, /usr/local/man and /usr/local/share/RNAstrand. If those default installation directories are chosen, no setting of environment variable RNASTRANDDIR is necessary.

If you have no root rights on your system or prefer to install RNAstrand into a self-contained directory run configure for example like this:

./configure --prefix=/somedir/RNAstrand --datadir=/somedir/RNAstrand/share

Environment variable RNASTRANDDIR

RNASTRANDDIR points to the directory with the support vector machine model files (*.model) and strand.range. You only need to set this variable if RNAstrand is not installed in its default installation directory.

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Updated: 29 May 2007