Supplemental Figures (S1-S4)

schistosoma_mansoni_supplement.ps
schistosoma_mansoni_supplement.pdf

ncRNA coordinate, sequence and structural alignment files

Coordinates are given as BED files, sequences are given as FASTA files, and structural alignments are given as STK files. You might use emacs together with RALEE to view STK files.

Schistosoma mansoni - all results: BED | FASTA

rRNA:
- 5S: BED | FASTA
- 18S-5.8S-28S: BED | FASTA
miRNA:
- BED | FASTA | STK
putative 7SK:
- BED | FASTA
putative MRP:
- BED | FASTA | STK
RNase P:
- BED | FASTA | STK
slRNA:
- BED | FASTA | STK
- Clustal slRNA alignment (100nt flanking region) | slRNA alignment, EPS
snRNA:
- BED | FASTA
- U1: STK
- U2: STK
- U4: STK
- U4atac: STK
- U5: STK
- U6: STK
- U6atac: STK
- U11: STK
- U12: STK
- ALL: PDF EPS
- U4atac/U6atac interaction: STK
SRP:
- BED | FASTA | STK
tRNA:
- BED | FASTA
snoRNA:
- box C/D snoRNAs (GFF) | box H/ACA snoRNAs (GFF)
Potassium channel RNA editing signal:
- FASTA | ALN

Schistosoma japonicum - all results: BED | FASTA

rRNA:
- 5S: BED | FASTA
- operons BED | FASTA
miRNA:
- mir-566: BED | FASTA
- mir-789 BED | FASTA
- mir-1186: BED | FASTA
- mir-1195: BED | FASTA
- mir-1273: BED | FASTA
- mir-1925: BED | FASTA
snRNA:
- U1: BED | FASTA
- U2: BED | FASTA
- U3: BED | FASTA
- U4: BED | FASTA
- U4atac: BED | FASTA
- U5: BED | FASTA
- U6: BED | FASTA
- U6atac: BED | FASTA
- U7: BED | FASTA
- U11: BED | FASTA
- U12: BED | FASTA
MRP:
- BED | FASTA
RNase P:
- BED | FASTA
SRP:
- BED | FASTA
tRNA:
- BED | FASTA
Potassium channel RNA editing signal:
- BED | FASTA | ALN