Example application 1: Ultra-conserved regions (UCRs) in nematodes
We identified 530 UCRs and 4,479 CNEs, all coordinates resp. sequences refer to Caenorhabditis elegans.
Example application 2: Ultra-conserved regions (UCRs) in teleosts
We identified 2,377 UCRs, all coordinates resp. sequences refer to Takifugu rubripes.
Example application 3: Prediction of novel structured non-coding RNAs in gammaproteobacterial genomes
Further supplementary tables and figures: PDF
Download NcDNAlign: http://www.bioinf.uni-leipzig.de/Software/NcDNAlign