Po2tree - Protein inclusion tree
po2tree.pl [OPTIONS]... <FILE> >OUTPUT
Generates a UPGMA species tree based on (co-)orthologous groups detected by Proteinortho. Thereby species that have a large part of their proteome in common are grouped.
The OUTPUT is a newick tree. Branch labels show the number of common genes in the subtrees. Branch lengths represent the number of new common genes since the last node.
Marcus Lechner <marcus[at]bioinf.uni-leipzig.de>
Written by Marcus Lechner and Lydia Steiner
Interdisciplinary Center for Bioinformatics, University of Leipzig