DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 36065 Protein: tr|F2Y9S7|F2Y9S7_PHYPO ATP synthase subunit a OS=Physarum polycephalum GN=atp6 PE=2 SV=1 @ 0 DNA length: 1476 Protein length: 246 1 Nt shifts: 32 ||| 2 Nt shifts: 0 Score: 940 Length-adjusted: 3.82 36066 AATGAATTATATAATCCTTT-GAACAATTTGAAATTATATA-ATTTCAAAGCTAAG-TTATTTGGTTTCGATATCTCCCTTACAAT-TTA 36151 1 M N L Y N P F E Q F E I I L I S K L K L F G F D I S L T N L 30 36152 ACTGTAGTGGTATTAAGTACAGCTTT-ATAATCTTCACTTA-AATTATATACTGAT-AAAGGTTATAATAT-ATTCCACATAATTGGCAA 36237 31 T V V V L S T A F I I F T L N Y I L D K G Y N Y I P H N W Q 60 36238 ATAGTATG-GAAGCAATGTATAA-TTTGTTTTTAGTATTGTTTCAGAACAAGT-GGACGTAAAGGATT-AAATACTTACCTCATTTGCT- 36322 61 I V M E A M Y Q F V F S I V S E Q A G R K G I K Y L P H L A 90 36323 ACTATTTTTTTTATTATTTA-TTTTATAACTTATCAGGATTAGCCCT-TTTAGTTTTACTGCAGT-TCACATTTAGTAATTACCTT-GGT 36408 91 T I F F I I L F Y N L S G L A P F S F T A S S H L V I T F G 120 36409 TTAGCATTAAGTAT-TTCATTGCATGGGTTATATA-GGTATTAAAGAATTAGGTCT-AAATTCGTATATGTTTTTGT-CCTAAAAATATG 36494 121 L A L S Y F I A W V I I G I K E L G P K F V Y V F C P K N M 150 36495 CT-TTATGGTTATTACCTTTATTAATTGT-GTAGAATTTTTATT-TTCTTCTTACGTCCTATAGT-CTGGGTCTTCGTTTATTTGCAAAT 36580 151 P L W L L P L L I C V E F L S F F L R P I S L G L R L F A N 180 36581 ATGTTAGCGGT-CATATCTTATTACATATTTA-GCTGGTGGTTGTGTTTATTA-TTAACTAAACTATT-ATCTTAGCAATTCCTGCTTTT 36666 181 M L A G H I L L H I L A G G C V Y L L T K L F I L A I P A F 210 36667 GCTATATT-GGCGCTATCGGTATTTA-GAACTTGGTATAGGATTTTTACAAGCTTATATTTT-GTTATTCTTTTAGCCATCTATCTTAAA 36753 211 A I I G A I G I L E L G I G F L Q A Y I F V I L L A I Y L K 240 36754 GATTCTTTATATTCTCAT 36771 241 D S L Y S H 246 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35565 Protein: tr|Q3SAU3|Q3SAU3_PHYPO ATP synthase subunit 8 OS=Physarum polycephalum GN=atp8 PE=4 SV=1 @ 0 DNA length: 456 Protein length: 76 1 Nt shifts: 8 ||| 2 Nt shifts: 0 Score: 302 Length-adjusted: 3.97 35566 CATGCACAATTTGATACTTC-ATTTTTTCTAGTAGTTC-TTTTATTTTATATT-ACTTTTTTCATCCTATTATATTTTAATTTCACTGC- 35651 1 M P Q F D T F I F S S S L F Y F I I T F F I L L Y F N F T R 30 35652 TTCTTACCTAGATTAAGTGCATA-TTAAAATTACGTAGTAAATTAACTAAAAAATT-AGTCTTCAAGATAATATTAATGTATT-TATCAT 35738 31 F L P R L S A I L K L R S K L T K K S S L Q D N I N V S Y H 60 35739 GATAAATATTCTGTTTT-GGTTCTCAATTAACAATTAACGAAAAAGCT 35785 61 D K Y S V F G S Q L T I N E K A 76 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35568 Protein: tr|Q3SAU3|Q3SAU3_PHYPO ATP synthase subunit 8 OS=Physarum polycephalum GN=atp8 PE=4 SV=1 @ 0 DNA length: 456 Protein length: 76 1 Nt shifts: 8 ||| 2 Nt shifts: 0 Score: 293 Length-adjusted: 3.86 35569 GCA---CAATTTGATACTTC-ATTTTTTCTAGTAGTTC-TTTTATTTTATATT-ACTTTTTTCATCCTATTATATTTTAATTTCACTGC- 35651 1 M P Q F D T F I F S S S L F Y F I I T F F I L L Y F N F T R 30 35652 TTCTTACCTAGATTAAGTGCATA-TTAAAATTACGTAGTAAATTAACTAAAAAATT-AGTCTTCAAGATAATATTAATGTATT-TATCAT 35738 31 F L P R L S A I L K L R S K L T K K S S L Q D N I N V S Y H 60 35739 GATAAATATTCTGTTTT-GGTTCTCAATTAACAATTAACGAAAAAGCT 35785 61 D K Y S V F G S Q L T I N E K A 76 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53844 Protein: tr|F2Y9S9|F2Y9S9_PHYPO ATP synthase subunit alpha OS=Physarum polycephalum GN=atpA PE=2 SV=1 @ 0 DNA length: 3168 Protein length: 528 1 Nt shifts: 54 ||| 2 Nt shifts: 0 Score: 2343 Length-adjusted: 4.44 53845 ATGACATTTCTTAAATCCGTATATATTTTAGATGATGAAATTAATCAAGATGTTATTGATAACATTGATGAAAATGAAGACCCGTCAAT- 53933 1 M T F L K S V Y I L D D E I N Q D V I D N I D E N E D P S I 30 53934 GGTCAAATTATTTCTGTAAAGAT-GGTGTTGCTTTTGTTACAGGATTGAT-AATATTCAAGTAGGTGAAATGGTAGAATTTATTCT-AAG 54020 31 G Q I I S V K D G V A F V T G L D N I Q V G E M V E F I S K 60 54021 GGTTTAACGGT-ATGGCTCTTAATCTAGAAGCTGAACAAGTGGT-TGTATTATTTTTGGTGATGATACTCT-GTTCAACAAGATGATTCT 54107 61 G L T G M A L N L E A E Q V G C I I F G D D T S V Q Q D D S 90 54108 GTCGT-GCTTTAAATACTTA-GTCAAAACCCT-GTAGGTTATGGCTTATTAGGTCGTGTTGTGAT-GGTATTGGTAATTT-ATCGATGGT 54192 91 V R A L N T L V K T P V G Y G L L G R V V D G I G N F I D G 120 54193 GGTGAAACTAT-GCTTTTGAGGAATATCTCAATGTGAA-CGTAAAGCTCCTGGTGTTATACT-CGTGAATCTGTTACTGAACA-ATGTTA 54278 121 G E T I A F E E Y L N V E R K A P G V I T R E S V T E P M L 150 54279 ACTGGTTATAAAAT-GTTGATTCTATGTTACCTAT-GGACGTGGTCAAAGGGAACTTATTGTTGGTGATCGTAA-ACAGGTAAAACTACT 54365 151 T G Y K I V D S M L P I G R G Q R E L I V G D R Q T G K T T 180 54366 ATTGCTAT-GATACTATTCTTAATCAACGTTATACAAT-GAAGAAGATATTGATCTTAT-TGTGTGTATGTTGGAATTGGTCAAAAAAAA 54452 181 I A I D T I L N Q R Y T N E E D I D L Y C V Y V G I G Q K K 210 54453 AGTTCTATTTG-AATATTCAAACTTA-CTTCAAAATAATAAAGCGCT-CATTATACTACTATTGTTGCTGCAACGCT-GCACAAAGTGCC 54538 211 S S I L N I Q T L L Q N N K A A H Y T T I V A A T A A Q S A 240 54539 TCTCTTCAGTTTATTGCTCCATATACAGGATGTGCATT-GCTGAATTTTATCGTGATAA-GGTGAACATGCTTA-ATTATTTATGATGAT 54625 241 S L Q F I A P Y T G C A I A E F Y R D Q G E H A L I I Y D D 270 54626 TTAACAAAACATGCTGCTGCTTATGA-CAATTATCTTTATA-TTAAGACGCCCACCAGGACGTGAAGCTTTCCA-GGTGATGTTTTTAT- 54711 271 L T K H A A A Y R Q L S L L L R R P P G R E A F P G D V F Y 300 54712 GCTCATTCAGA-CTTTTAGAAAGAGCATGCAAACTTAA-ACTAATTTCGGTGGAGGTTCTTTAACGCT-TTACCTATTGTAGAAACACAA 54798 301 A H S R L L E R A C K L N T N F G G G S L T A L P I V E T Q 330 54799 GCGGT-GATTTATCTGGTTATATCCA-ACTAATATTATTTCTATTACGAT-GGACAAATTTTCATGGAAAAAGATTA-TTCTTTAAAGGT 54884 331 A G D L S G Y I P T N I I S I T D G Q I F M E K D L F F K G 360 54885 ATCGT-CCAGCTGTTAATGTTGGTAGTTCTGTTTCTAGAGTGGT-TCTAAAGCTCAACCATA-GCTTTACGTTTAGTAACTGGTAATCTT 54971 361 I R P A V N V G S S V S R V G S K A Q P Y A L R L V T G N L 390 54972 CGTTATCAACTTGCTAA-TATCGTGAATATTCTGTTTT-GCACAATTTGATAATGATAT-GATGATGTTACAAGAGGAATTCTTAATAGA 55058 391 R Y Q L A Q Y R E Y S V F A Q F D N D I D D V T R G I L N R 420 55059 GGTGT-TTATTAACTGAAATTCTTAAACAAGGTCCTAATATGCA-ATGCAATTATATAAACAAGTTTTAATTATTTA-GCTGGTGCTTTT 55145 421 G A L L T E I L K Q G P N M P M Q L Y K Q V L I I L A G A F 450 55146 AATTTTATTACTCCTTTTATAAAGAT-TTTAAAAAAGATTTGAGCAATATTGT-GCTTTATATGAAACTAAACTATT-AAGTTTACACAT 55232 451 N F I T P F I K D F K K D L S N I C A L Y E T K L F K F T H 480 55233 GATAAACCTGAACGAGCTGAATTATTCTATCA-TTCTATGAATATTTATCATTCTTTGATAAAGCCGATTTTGGATTTGCTGA-AATCCA 55320 481 D K P E R A E L F Y P F Y E Y L S F F D K A D F G F A D N P 510 55321 TTATTATTTATTTTAAGAAGTTTTGAACCGGAATTCTATAAATCCATAAATGCC 55374 511 L L F I L R S F E P E F Y K S I N A 528 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 53856 Protein: tr|F2Y9S9|F2Y9S9_PHYPO ATP synthase subunit alpha OS=Physarum polycephalum GN=atpA PE=2 SV=1 @ 0 DNA length: 3168 Protein length: 528 1 Nt shifts: 54 ||| 2 Nt shifts: 0 Score: 2278 Length-adjusted: 4.31 53857 ------------AAATCCGTATATATTTTAGATGATGAAATTAATCAAGATGTTATTGATAACATTGATGAAAATGAAGACCCGTCAAT- 53933 1 M T F L K S V Y I L D D E I N Q D V I D N I D E N E D P S I 30 53934 GGTCAAATTATTTCTGTAAAGAT-GGTGTTGCTTTTGTTACAGGATTGAT-AATATTCAAGTAGGTGAAATGGTAGAATTTATTCT-AAG 54020 31 G Q I I S V K D G V A F V T G L D N I Q V G E M V E F I S K 60 54021 GGTTTAACGGT-ATGGCTCTTAATCTAGAAGCTGAACAAGTGGT-TGTATTATTTTTGGTGATGATACTCT-GTTCAACAAGATGATTCT 54107 61 G L T G M A L N L E A E Q V G C I I F G D D T S V Q Q D D S 90 54108 GTCGT-GCTTTAAATACTTA-GTCAAAACCCT-GTAGGTTATGGCTTATTAGGTCGTGTTGTGAT-GGTATTGGTAATTT-ATCGATGGT 54192 91 V R A L N T L V K T P V G Y G L L G R V V D G I G N F I D G 120 54193 GGTGAAACTAT-GCTTTTGAGGAATATCTCAATGTGAA-CGTAAAGCTCCTGGTGTTATACT-CGTGAATCTGTTACTGAACA-ATGTTA 54278 121 G E T I A F E E Y L N V E R K A P G V I T R E S V T E P M L 150 54279 ACTGGTTATAAAAT-GTTGATTCTATGTTACCTAT-GGACGTGGTCAAAGGGAACTTATTGTTGGTGATCGTAA-ACAGGTAAAACTACT 54365 151 T G Y K I V D S M L P I G R G Q R E L I V G D R Q T G K T T 180 54366 ATTGCTAT-GATACTATTCTTAATCAACGTTATACAAT-GAAGAAGATATTGATCTTAT-TGTGTGTATGTTGGAATTGGTCAAAAAAAA 54452 181 I A I D T I L N Q R Y T N E E D I D L Y C V Y V G I G Q K K 210 54453 AGTTCTATTTG-AATATTCAAACTTA-CTTCAAAATAATAAAGCGCT-CATTATACTACTATTGTTGCTGCAACGCT-GCACAAAGTGCC 54538 211 S S I L N I Q T L L Q N N K A A H Y T T I V A A T A A Q S A 240 54539 TCTCTTCAGTTTATTGCTCCATATACAGGATGTGCATT-GCTGAATTTTATCGTGATAA-GGTGAACATGCTTA-ATTATTTATGATGAT 54625 241 S L Q F I A P Y T G C A I A E F Y R D Q G E H A L I I Y D D 270 54626 TTAACAAAACATGCTGCTGCTTATGA-CAATTATCTTTATA-TTAAGACGCCCACCAGGACGTGAAGCTTTCCA-GGTGATGTTTTTAT- 54711 271 L T K H A A A Y R Q L S L L L R R P P G R E A F P G D V F Y 300 54712 GCTCATTCAGA-CTTTTAGAAAGAGCATGCAAACTTAA-ACTAATTTCGGTGGAGGTTCTTTAACGCT-TTACCTATTGTAGAAACACAA 54798 301 A H S R L L E R A C K L N T N F G G G S L T A L P I V E T Q 330 54799 GCGGT-GATTTATCTGGTTATATCCA-ACTAATATTATTTCTATTACGAT-GGACAAATTTTCATGGAAAAAGATTA-TTCTTTAAAGGT 54884 331 A G D L S G Y I P T N I I S I T D G Q I F M E K D L F F K G 360 54885 ATCGT-CCAGCTGTTAATGTTGGTAGTTCTGTTTCTAGAGTGGT-TCTAAAGCTCAACCATA-GCTTTACGTTTAGTAACTGGTAATCTT 54971 361 I R P A V N V G S S V S R V G S K A Q P Y A L R L V T G N L 390 54972 CGTTATCAACTTGCTAA-TATCGTGAATATTCTGTTTT-GCACAATTTGATAATGATAT-GATGATGTTACAAGAGGAATTCTTAATAGA 55058 391 R Y Q L A Q Y R E Y S V F A Q F D N D I D D V T R G I L N R 420 55059 GGTGT-TTATTAACTGAAATTCTTAAACAAGGTCCTAATATGCA-ATGCAATTATATAAACAAGTTTTAATTATTTA-GCTGGTGCTTTT 55145 421 G A L L T E I L K Q G P N M P M Q L Y K Q V L I I L A G A F 450 55146 AATTTTATTACTCCTTTTATAAAGAT-TTTAAAAAAGATTTGAGCAATATTGT-GCTTTATATGAAACTAAACTATT-AAGTTTACACAT 55232 451 N F I T P F I K D F K K D L S N I C A L Y E T K L F K F T H 480 55233 GATAAACCTGAACGAGCTGAATTATTCTATCA-TTCTATGAATATTTATCATTCTTTGATAAAGCCGATTTTGGATTTGCTGA-AATCCA 55320 481 D K P E R A E L F Y P F Y E Y L S F F D K A D F G F A D N P 510 55321 TTATTATTTATTTTAAGAAGTTTTGAACCGGAATTCTATAAATCCATAAATGCC 55374 511 L L F I L R S F E P E F Y K S I N A 528 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 25818 Protein: sp|Q07434|COX1_PHYPO Cytochrome c oxidase subunit 1 OS=Physarum polycephalum GN=COX1 PE=2 SV=2 @ 0 DNA length: 3564 Protein length: 594 1 Nt shifts: 62 ||| 2 Nt shifts: 0 Score: 2550 Length-adjusted: 4.29 25819 AATGAGTCAATTCCATTTGATAA-AAAACTATTAGATTATTAGGTATGAAAATGGATACAGA-GATTTTTATACTTC-GCAGATCGTTGG 25905 1 M S S I P F D Q K T I S L L G M K M D T S D F Y T F A D R W 30 25906 TTATTCTCAACAAT-CATAAATATAT-GGTACTTTATATTTATTATTTAGTAT-GGTGCTGGTTTAGCTGGATA-GCCTTATCTGTTATA 25991 31 L F S T N H K Y I G T L Y L L F S I G A G L A G L A L S V I 60 25992 TG-CGTATGGAGTTAGCAGT-TGTGGTGATTTAATTTTAAATTT-AATTATCAACTTTATAATACATT-GTAACTGCTCATGCCTTATT- 26076 61 M R M E L A S C G D L I L N S N Y Q L Y N T I V T A H A L I 90 26077 ATGATTTTTTTCTTTGTGATGCT-GCTTTAATTGGTGGGTTTGGAAATTGGTTTGTACT-TTACTTATAGGTGCTCCTGATATGGCATTT 26164 91 M I F F F V M P A L I G G F G N W F V P L L M G A P D M A F 120 26165 CCTCGTTTAAATAATATAGT-TTATGGTTATTACCTTCCTCTTTAATTTTACTTCTTTTATCTTCTTATGTTGAAAT-GGTGCTGGAACT 26252 121 P R L N N I S L W L L P S S L I L L L L S S Y V E I G A G T 150 26253 GGTTGGACTGTTTATCCTCCACTATCTTCTATTACTGGTCATAGCGGACCATCTGTTGATTTAGCTATTTTTAGTTG-CATCTAGCTGGT 26341 151 G W T V Y P P L S S I T G H S G P S V D L A I F S L H L A G 180 26342 GTTTCTTCTATGTTAGGTGCTATAAT-TTCATTTGTACATT-AAAAATATGCGTTTAAAGGA-TTAACAGGAGAACGTTTATCTTTATT- 26427 181 V S S M L G A I N F I C T I K N M R L K G L T G E R L S L F 210 26428 GTTTGGGCTGTATTAGTAACTGTGATTTTATTATTACTTTCACTGCCTGTTTA-GCAGGTGCTATACT-ATGTTATTAACTGATGT-AAT 26514 211 V W A V L V T V I L L L L S L P V L A G A I T M L L T D R N 240 26515 TTTAATACATCTTCTCCTGATGCAACGGT-GGTGGAGATCCTATTTTATATCAACATTTGTCTTGGTTTTTTGGCCATCCAGAAGT-TC- 26601 241 F N T S F F D A T G G G D P I L Y Q H L F W F F G H P E V Y 270 26602 ATTTTAATTTTACCTGGTTTTGGTAT-GTTTCTATTATTATTCAAGCTAT-GCTAATAAAGT-ATTTTTGGTTATTTAGGTATGGTGTAT 26688 271 I L I L P G F G I V S I I I Q A Y A N K A I F G Y L G M V Y 300 26689 GCTATGTTGTCTATTGGTATTTG-GGTTTTATAGTGTGGGCTCATAT-ATGTATACTGTAGGATTGGATGTGGATACGCGC---TTATTT 26773 301 A M L S I G I L G F M V W A H H M Y T V G L D V D T R A Y F 330 26774 CACGCTGCTACTATGATATT-GCTGTGCCAACGGT-ATTAAGATTTTTAGTGG-TTAGCAACCTTATTTGGTTCTTATCTTAAATTACGT 26860 331 T A A T M I I A V P T G I K I F S W L A T L F G S Y L K L R 360 26861 ACTCCTTTACTATTCATCTTAGGTTTTCTTATTTTGTTTACATTAGGTGGTCTTAGTGGAGTTGT-TA-GCTAATTCTGGTCTTGATAT- 26947 361 T P L L F I L G F L I L F T L G G L S G V V L A N S G L D I 390 26948 GCTTTCCATGATACTAT-TATGTTGTAGCTCATTTTCATTATGTTTA-TCTATGGGAGCAGTTTT-GCTGCTTTTGCTGCTTTTTATAT- 27033 391 A F H D T Y Y V V A H F H Y V L S M G A V F A A F A A F Y H 420 27034 TGGTTTTCTATTATTAAATCTTT-ACTACTTATGAACCACA-GAATGGGAATTTGTTTATAATCCTTT-GAATTACGAAAAAAAATTCCT 27120 421 W F S I I K S F T T Y E P H E W E F V Y N P F E L R K K I P 450 27121 TATGT-CGTACTGATTTTAGTTATTTGAA-ACAGCTGGTATTTA-CATTTCATTACTACTTC-ATTGGTGTTAATCTTACTTC-TTCCCT 27205 451 Y R R T D F S Y L E T A G I L H F I T T F I G V N L T F F P 480 27206 ATGCATTA-TTAGGTCTTGCAGGAATGCA-CGCCGTATTCCAGATTATCCTGATGCTAT-TTACATTTTAATTTAATAGT-AGTTATGGT 27291 481 M H L L G L A G M P R R I P D Y P D A Y L H F N L I S S Y G 510 27292 TCTTTTGTTACTTA-GTTTCCACTATCATATTCTTTATATTTGGTGTGTT-TTTAATTATAATTTATTTATAAT-GGTTTTCCTTCTATA 27378 511 S F V T L V S T I M F F M F G V V F N Y N L F I N G F P S M 540 27379 TTTTATATATT-AAACCTTTAATCAAAATTACTTTCTTCGT-ATTAAACAAATATT-CAAGGAAATAATGAATGTCTTAATAGTATTCT- 27464 541 F Y I I K P L I K I T F F R I K Q I I Q G N N E C L N S I S 570 27465 AAAGAATTAACATC-TTAATTCTTCATGTTAAACGCTTGTCTAAATTAAGCGTAAATAACTGGAGAATTGCT 27535 571 K E L T I L I L H V K R L S K L S V N N W S I A 594 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 28985 Protein: tr|Q3SAU2|Q3SAU2_PHYPO Cytochrome c oxidase subunit 2 OS=Physarum polycephalum GN=cox2 PE=2 SV=1 @ 0 DNA length: 1428 Protein length: 238 1 Nt shifts: 32 ||| 2 Nt shifts: 0 Score: 954 Length-adjusted: 4.01 28986 AATGATTATGATTTAGCACGTAA-TGGCAATGGAATTTTCAAGATCA-GCTTCTCCTTTGATGGAAGGTTTATT-GATCTTCATCATAAT 29072 1 M I Y D L A R Q W Q W N F Q D P A S P L M E G L I D L H H N 30 29073 ATTTA-TTTGTTTTAATTTTAATTTT-GGGGTTGTTACTCT-TTAATTGTTTCCATTATTAAAGATACTCT-TACATTTGGATAAA-CCA 29157 31 I L F V L I L I F G V V T S L I V S I I K D T S Y I W I K P 60 29158 AATAAAAAAAATATATT-CGACAAAAACAATATTA-TTATTTTCTAATTTAAATCATGGTACATT-CTAGAAATAGTTGG-ACATTAATT 29243 61 N K K N I I R Q K Q Y L L F S N L N H G T I L E I V W T L I 90 29244 CCTTCTTTTATCTA-TTTGCCATAGCTATTCCATA-TTTGCTCTTCTTTATTCTATGGAAGAGATTTT-GAACCACAAATAACATT-AAA 29329 91 P S F I L F A I A I P S F A L L Y S M E E I F E P Q I T I K 120 29330 GTTAT-GCTAATCAATGGTATGG-AGCTTTGAATATGGTAATTA-GGTCTTGAATGGGATTCTTATATGATAAT-GAACCAGATTTAGTT 29415 121 V I A N Q W Y W S F E Y G N L G L E W D S Y M I N E P D L V 150 29416 AAAGGTGAACT-CGTTTATTAACTGTGAT-AATCCTTTATTTGTACT-GTTGAAACTAATGTAGA-TTACTTATACT-TCTAAAGATGTT 29500 151 K G E P R L L T V D N P L F V P V E T N V R L L I T S K D V 180 29501 ATCAT-GCTTTTGCTGTCCCTTT-TTAGGTTTAAAAGTGAT-GCTGTTCCTGGCCGTTTAAATCAATA-TCTTGTTATATCAACCGTCT- 29585 181 I H A F A V P S L G L K V D A V P G R L N Q L S C Y I N R P 210 29586 GGTATTTACTATGGCCAATGTTT-GAATTATGTGGAGTTAATCATGCTTTTATGCA-TTGCAAATCGTATCCTTTAAATGGGAT 29667 211 G I Y Y G Q C S E L C G V N H A F M P L Q I V S F K W D 238 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55519 Protein: tr|Q9XKY6|Q9XKY6_PHYPO Cytochrome c oxidase subunit 3 OS=Physarum polycephalum GN=cox3 PE=2 SV=1 @ 0 DNA length: 1584 Protein length: 264 1 Nt shifts: 30 ||| 2 Nt shifts: 0 Score: 850 Length-adjusted: 3.22 55520 ------------------------------------------------ATT---GTTTCAGCAGCTTTATTAGGATTAACTAT-GGAGGT 55557 1 M N N K H P Y H L V N P S P W P I S V S A A L L G L T I G G 30 55558 GTTTCTTATTTTCACTCTTT-AACAATGGTATTAT-TTATTAACTTCTTCTTTTATTTA-CTTGCTATTTTAGA-GGTTTTTGGTGGAGA 55643 31 V S Y F H S F N N G I Y L L T S S F I L L A I L A G F W W R 60 55644 GATTA-ATTCGTGAAGGTACTAT-TTACATAATCATACTAAAGAAGTCTT-TTAGGTTTACGTTA-GGTTTTATTTTATTTATTGTTTCT 55729 61 D L I R E G T Y L H N H T K E V L L G L R L G F I L F I V S 90 55730 GAAGTATG-TTTTTCTTTTCTTTTTTCTGGGCTAT-TTTCATAGTAGTTA-AGCCCTAATATTGAAAT-GGTAGTCAATGGCCTCCTTTT 55815 91 E V M F F F S F F W A Y F H S S L S P N I E I G S Q W P P F 120 55816 GCTTTAGAAGTATA-GGTTTAGCTTTACCTGTTGTTAATACGTT-ATTCTTTTAACTTCTGGAGCACA-ATTACTGTAGCCCATTA-GCT 55901 121 A L E V I G L A L P V V N T V I L L T S G A T I T V A H L A 150 55902 ATCTTACGTAATAAAAAACAAATTGCTAT-GAATCTTTAATAGCTACATT-GTTTTAGCTTTAGTTTTTACTGT-ATTCAAATGTATGAG 55988 151 I L R N K K Q I A I E S L I A T I V L A L V F T A I Q M Y E 180 55989 TATGT-CATGCTCCTTTTCT-ATTTCTGATGGAATTTATGGTTCAGTTTTTAT-ATGTTAACAGGTTTTCATGGAATTCATGTTCTTAT- 56074 181 Y R H A P F S I S D G I Y G S V F Y M L T G F H G I H V L I 210 56075 GGTACTATCTTTATTGT-GTTCAATTTGTTCGTCTTACAAAGAT-CATTTATTATCTAA-AGTCATTTAGGATTTGAAGCTTG-GCTTGG 56160 211 G T I F I C V Q F V R L T K D H L L S N S H L G F E A C A W 240 56161 TATTGGCATTTCGTTGATGTGTT-TGGTTACTTTTATTTGTAAT-GTGTATGCTTATGGAAGTAATGCCCTT 56230 241 Y W H F V D V V W L L L F V I V Y A Y G S N A L 264 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 55519 Protein: tr|Q9XKY6|Q9XKY6_PHYPO Cytochrome c oxidase subunit 3 OS=Physarum polycephalum GN=cox3 PE=2 SV=1 @ 0 DNA length: 1584 Protein length: 264 1 Nt shifts: 33 ||| 2 Nt shifts: 0 Score: 1097 Length-adjusted: 4.16 55520 ATGAATAATAAACATCA-TATCATTTAGTAAT-CCATCCCCATGGCCTATATT-GTTTCAGCAGCTTTATTAGGATTAACTAT-GGAGGT 55605 1 M N N K H P Y H L V N P S P W P I S V S A A L L G L T I G G 30 55606 GTTTCTTATTTTCACTCTTT-AACAATGGTATTAT-TTATTAACTTCTTCTTTTATTTA-CTTGCTATTTTAGA-GGTTTTTGGTGGAGA 55691 31 V S Y F H S F N N G I Y L L T S S F I L L A I L A G F W W R 60 55692 GATTA-ATTCGTGAAGGTACTAT-TTACATAATCATACTAAAGAAGTCTT-TTAGGTTTACGTTA-GGTTTTATTTTATTTATTGTTTCT 55777 61 D L I R E G T Y L H N H T K E V L L G L R L G F I L F I V S 90 55778 GAAGTATG-TTTTTCTTTTCTTTTTTCTGGGCTAT-TTTCATAGTAGTTA-AGCCCTAATATTGAAAT-GGTAGTCAATGGCCTCCTTTT 55863 91 E V M F F F S F F W A Y F H S S L S P N I E I G S Q W P P F 120 55864 GCTTTAGAAGTATA-GGTTTAGCTTTACCTGTTGTTAATACGTT-ATTCTTTTAACTTCTGGAGCACA-ATTACTGTAGCCCATTA-GCT 55949 121 A L E V I G L A L P V V N T V I L L T S G A T I T V A H L A 150 55950 ATCTTACGTAATAAAAAACAAATTGCTAT-GAATCTTTAATAGCTACATT-GTTTTAGCTTTAGTTTTTACTGT-ATTCAAATGTATGAG 56036 151 I L R N K K Q I A I E S L I A T I V L A L V F T A I Q M Y E 180 56037 TATGT-CATGCTCCTTTTCT-ATTTCTGATGGAATTTATGGTTCAGTTTTTAT-ATGTTAACAGGTTTTCATGGAATTCATGTTCTTAT- 56122 181 Y R H A P F S I S D G I Y G S V F Y M L T G F H G I H V L I 210 56123 GGTACTATCTTTATTGT-GTTCAATTTGTTCGTCTTACAAAGAT-CATTTATTATCTAA-AGTCATTTAGGATTTGAAGCTTG-GCTTGG 56208 211 G T I F I C V Q F V R L T K D H L L S N S H L G F E A C A W 240 56209 TATTGGCATTTCGTTGATGTGTT-TGGTTACTTTTATTTGTAAT-GTGTATGCTTATGGAAGTAATGCCCTT 56278 241 Y W H F V D V V W L L L F V I V Y A Y G S N A L 264 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59905 Protein: tr|O79719|O79719_PHYPO Cytochrome b OS=Physarum polycephalum GN=cytb PE=2 SV=1 @ 0 DNA length: 2352 Protein length: 392 1 Nt shifts: 43 ||| 2 Nt shifts: 0 Score: 1766 Length-adjusted: 4.51 59906 ATGCGTAA-GTAAAAAGATCCTA-GGATTTATATATGATACAGCCATAACTTATCCAGC-CT-GCAACTTTGAATTATAATAT-AACTTT 59990 1 M R Q V K R S L G F I Y D T A I T Y P A P A T L N Y N Y N F 30 59991 GGTATATATGCTTA-GTTGTATTGGCATA-CAAATTATTACTGGTATTTTTCTTGTTATGTTTTATTGCTCAAATGCATT-TTAGCTTTT 60077 31 G I Y A L V V L A L Q I I T G I F L V M F Y C S N A S L A F 60 60078 TTAAGTGTTGAGCATTTATG-AGAGATGTCCT-TATGGTTGGTTTATCCGATATCTCAT-GCTAATGGTGCTTCTTTTTTCTTTATTGTA 60164 61 L S V E H L M R D V P Y G W F I R Y L H A N G A S F F F I V 90 60165 GTATATGCTCATCTTTTTCGCGGTTTGTATTATGGTTCATACTTTTTTCCGCC-GA-TTATTATGGTGCTCGGA-GTAATTATTTTATTA 60251 91 V Y A H L F R G L Y Y G S Y F F P R R L L W C S G V I I L L 120 60252 TTAATGATTATTACTTCTTTTTA-GGATATGTTTTACT-TGGGGACAAATGTCTTATTGGGCAGCTACGTT-ATTACTAATTTAGCTCT- 60337 121 L M I I T S F L G Y V L P W G Q M S Y W A A T V I T N L A S 150 60338 ACTGTTCCTTC-TTTGGTCAAAAAATTGTAAATTGGCTTGG-AGTGGTTTTTCTGTAGATAATCCTACTTA-GC-AAATTTTTCTCTTTA 60423 151 T V P F F G Q K I V N W L W S G F S V D N P T L S K F F S L 180 60424 CATTATATTTA-CCTTTTGTATT-TTAGCTTTTGTTTTATTACATTTAGCCTTATA-CATCAATCTGGTAGTGGTACATCTTCAGGGTGG 60510 181 H Y I L P F V I L A F V L L H L A L L H Q S G S G T S S G W 210 60511 GGCCGCTCTATTGATGAAATTCT-TTTCATCCTTATTATACATT-AAAGATTTTTTTAGTGTAATTTTATTTATAGCCATAATTATATTC 60598 211 G R S I D E I P F H P Y Y T I K D F F S V I L F I A I I I F 240 60599 TTTGTTCT-TTTATACCTAATAGCTA-GGTCATCCAGATAATTATATTCCTGCAAT-CCTGATCAAACTCT-GAGCATATTGTTCA-GAA 60683 241 F V S F I P N S L G H P D N Y I P A N P D Q T P E H I V P E 270 60684 TGGTATTTTCTACCTTTTTATGCATC-CTTCGATCTATTCT-AATAAATTATTAGGTGTTATTGCCCTTGTTGCTAGTATCATTTC-TTA 60770 271 W Y F L P F Y A I L R S I P N K L L G V I A L V A S I I F L 300 60771 TTAATATTACCTTTTATAGATGT-CCTTTAACCCGTAGTCT-GTTTATAAGCA-TTTATTGCTAAACTTAATATTTTATTTAT-GCTGAT 60856 301 L I L P F I D R P L T R S S V Y K P F I A K L N I L F I A D 330 60857 TGTTTTGTTTTAGGTTATAT-GGTCAAAGTCCTCTTGAAGAACG-TTCTTATTTTTAGGACGTTTAACAACCTTATA-TACTTTGCCTAT 60943 331 C F V L G Y I G Q S P L E E P F L F L G R L T T L I Y F A Y 360 60944 TTCTTTGTATC-ATAATTGTAAGTCAAATTGACCGTTATTTTCTTAAAGCTGTTCAAAAACTCCCTGATAATATTGTTTATAATTCTCTT 61032 361 F F V F I I V S Q I D R Y F L K A V Q K L P D N I V Y N S L 390 61033 TCTAAA 61038 391 S K 392 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 59977 Protein: tr|O79719|O79719_PHYPO Cytochrome b OS=Physarum polycephalum GN=cytb PE=2 SV=1 @ 0 DNA length: 2352 Protein length: 392 1 Nt shifts: 43 ||| 2 Nt shifts: 0 Score: 1373 Length-adjusted: 3.50 59978 ATGCGTAA-GTAAAAAGATCCTA-GGATTTATATATGATACAGCCATAACTTATCCAGC-CT-GCAACTTTGAATTATAATAT-AACTTT 60062 1 M R Q V K R S L G F I Y D T A I T Y P A P A T L N Y N Y N F 30 60063 GGTATATATGCTTA-GTTGTATTGGCATA-CAAATTATTACTGGTATTTTTCTTGTTATGTTTTATTGCTCAAATGCATT-TTAGCTTTT 60149 31 G I Y A L V V L A L Q I I T G I F L V M F Y C S N A S L A F 60 60150 TTAAGTGTTGAGCATTTATG-AGAGATGTCCT-TATGGTTGGTTTATCCGATATCTCAT-GCTAATGGTGCTTCTTTTTTCTTTATTGTA 60236 61 L S V E H L M R D V P Y G W F I R Y L H A N G A S F F F I V 90 60237 GTATATGCTCATCTTTTTCGCGGTTTGTATTATGGTTCATACTTTTTTCCGCC-GA-TTATTATGGTGCTCGGA-GTAATTATTTTATTA 60323 91 V Y A H L F R G L Y Y G S Y F F P R R L L W C S G V I I L L 120 60324 TTAATGATTATTACTTCTTTTTA-GGATATGTTTTACT-TGGGGACAAATGTCTTATTGGGCAGCTACGTT-ATTACTAATTTAGCTCT- 60409 121 L M I I T S F L G Y V L P W G Q M S Y W A A T V I T N L A S 150 60410 ACTGTTCCTTC-TTTGGTCAAAAAATTGTAAATTGGCTTGG-AGTGGTTTTTCTGTAGATAATCCTACTTA-GC-AAATTTTTCTCTTTA 60495 151 T V P F F G Q K I V N W L W S G F S V D N P T L S K F F S L 180 60496 CATTATATTTA-CCTTTTGTATT-TTAGCTTTTGTTTTATTACATTTAGCCTTATA-CATCAATCTGGTAGTGGTACATCTTCAGGGTGG 60582 181 H Y I L P F V I L A F V L L H L A L L H Q S G S G T S S G W 210 60583 GGCCGCTCTATTGATGAAATTCT-TTTCATCCTTATTATACATT-AAAGATTTTTTTAGTGTAATTTTATTTATAGCCATAATTATATTC 60670 211 G R S I D E I P F H P Y Y T I K D F F S V I L F I A I I I F 240 60671 TTTGTTCT-TTTATACCTAATAGCTA-GGTCATCCAGATAATTATATTCCTGCAAT-CCTGATCAAACTCT-GAGCATATTGTTCA-GAA 60755 241 F V S F I P N S L G H P D N Y I P A N P D Q T P E H I V P E 270 60756 TGGTATTTTCTACCTTTTTATGCATC-CTTCGATCTATTCT-AATAAATTATTAGGTGTTATTGCCCTTGTTGCTAGTATCATTTC-TTA 60842 271 W Y F L P F Y A I L R S I P N K L L G V I A L V A S I I F L 300 60843 TTAATATTACCTTTTATAGATGT-CCTTTAACCCGTAGTCT-GTTTATAAGCA-TTTATTGCTAAACTTAATATTTTATTTAT-GCTGAT 60928 301 L I L P F I D R P L T R S S V Y K P F I A K L N I L F I A D 330 60929 TGTTTTGTTTTAGGTTATAT-GGTCAAAGTCCTCTTGAAGAACG-TTCTTATTTTTAGGACGTTTAACAACCTTATA-TACTTTGCCTAT 61015 331 C F V L G Y I G Q S P L E E P F L F L G R L T T L I Y F A Y 360 61016 TTCTTTGTATC-ATAATTGTAAGT------------------------------------------------------------------ 61038 361 F F V F I I V S Q I D R Y F L K A V Q K L P D N I V Y N S L 390 61039 ------ 61038 391 S K 392 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 58892 Protein: tr|F2Y9T1|F2Y9T1_PHYPO NADH-ubiquinone oxidoreductase chain 1 OS=Physarum polycephalum GN=nad1 PE=2 SV=1 @ 0 DNA length: 1932 Protein length: 322 1 Nt shifts: 40 ||| 2 Nt shifts: 0 Score: 1292 Length-adjusted: 4.01 58893 ATGACAGTTTTACTGTT-TTAATAAAATTTTTAATTATTATTGA-CCAACATTATTAATAGTAGCTACTTTAACCTTACTAGAACGTAAA 58980 1 M T V L L V L I K F L I I I V P T L L I V A T L T L L E R K 30 58981 ATATG-GCCGCGATTAA-ATACGTCGAGGACCTAATGTTATAGGTTT-GGAATATTGCAACCCTTGCT-GATGGTTTAAAACTTTTAATA 59066 31 I M A A I Q I R R G P N V I G F G I L Q P L A D G L K L L I 60 59067 AAAGAATTATT-ATACCTTTAAAAGGAAATAAATGGTA-TTTTTATTATCACCAGTACTCTTTTTATA-TTAAGTTTTGCTAGTGG-TCT 59152 61 K E L I I P L K G N K W L F L L S P V L F L S L S F A S W S 90 59153 GTAATACA-TTTGAAGAGCATTATGTTGCTCT-CCTAATCTTAT-ATATTAGTATTTCTTGCTTTTCC-TCATTATCTGTTTATGGTATT 59238 91 V I P F E E H Y V A S P N L T I L V F L A F S S L S V Y G I 120 59239 TA-TTAGGTGGATGGGCTTG-AATTCTCGCTATGCTTTTTA-GGTGCTTTACGATA-GCATCTCAGATGATTTCTTATGAACTTGTTTA- 59323 121 L L G G W A S N S R Y A F L G A L R S A S Q M I S Y E L V L 150 59324 AGCCTATTAATTTTATTAGTTGT-ATTTTGGCTCAATCTTT-AATTTTGTTGATATTGTAAT-GCTCAAACAATACT-TGGTTTATAATA 59409 151 S L L I L L V C I L A Q S F N F V D I V N A Q T I T W F I I 180 59410 CT-TTAGCACCCTTTGCTTA-GTTTATTTTGTGGCTATACTAGT-GAAACTAATCGTACTCCTTTTGATTG-CCTGAAGCTGAAGT-GAA 59494 181 P L A P F A L V Y F V A I L A E T N R T P F D L P E A E A E 210 59495 CTTGTTGCAGGTTATAGTGTGAA-TATTCTAGTGGTCCTTT-GCTTTTTATTTTATTGCAGAATATGT-AATTTAATATT-TGGTCGTTT 59580 211 L V A G Y S V E Y S S G P F A F Y F I A E Y C N L I I W S F 240 59581 ACACA-ACTATTCTTTTTCTTGGAGGATGGTT-CCAAGTTTCTTATTTCCTTTTTA-AATGGTTTTATTTTATTTGCTTTAAAATA-ATG 59666 241 T T T I L F L G G W L P S F L F P F L N G F I L F A L K S M 270 59667 TTTATCCTAGCTTTATTTTGTTG-ATTAGAGCAGCACTCCG-AGATATCGTTGGGACCAATTAATGACATTAGCTGG-AGAGCCTTTTTA 59753 271 F I L A L F C C I R A A L P R Y R W D Q L M T L A W R A F L 300 59754 CCAAT-GTTTTGTTAGGGTGTTTTTTTGTTTATGCTTTTTTTAATTTTTATACTAATTTTTTACTT 59818 301 P I V L L G C F F V Y A F F N F Y T N F L L 322 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 58927 Protein: tr|F2Y9T1|F2Y9T1_PHYPO NADH-ubiquinone oxidoreductase chain 1 OS=Physarum polycephalum GN=nad1 PE=2 SV=1 @ 0 DNA length: 1932 Protein length: 322 1 Nt shifts: 39 ||| 2 Nt shifts: 0 Score: 1126 Length-adjusted: 3.50 58928 ---------------------ATT---------ATT------GA-CCAACATTATTAATAGTAGCTACTTTAACCTTACTAGAACGTAAA 58980 1 M T V L L V L I K F L I I I V P T L L I V A T L T L L E R K 30 58981 ATATG-GCCGCGATTAA-ATACGTCGAGGACCTAATGTTATAGGTTT-GGAATATTGCAACCCTTGCT-GATGGTTTAAAACTTTTAATA 59066 31 I M A A I Q I R R G P N V I G F G I L Q P L A D G L K L L I 60 59067 AAAGAATTATT-ATACCTTTAAAAGGAAATAAATGGTA-TTTTTATTATCACCAGTACTCTTTTTATA-TTAAGTTTTGCTAGTGG-TCT 59152 61 K E L I I P L K G N K W L F L L S P V L F L S L S F A S W S 90 59153 GTAATACA-TTTGAAGAGCATTATGTTGCTCT-CCTAATCTTAT-ATATTAGTATTTCTTGCTTTTCC-TCATTATCTGTTTATGGTATT 59238 91 V I P F E E H Y V A S P N L T I L V F L A F S S L S V Y G I 120 59239 TA-TTAGGTGGATGGGCTTG-AATTCTCGCTATGCTTTTTA-GGTGCTTTACGATA-GCATCTCAGATGATTTCTTATGAACTTGTTTA- 59323 121 L L G G W A S N S R Y A F L G A L R S A S Q M I S Y E L V L 150 59324 AGCCTATTAATTTTATTAGTTGT-ATTTTGGCTCAATCTTT-AATTTTGTTGATATTGTAAT-GCTCAAACAATACT-TGGTTTATAATA 59409 151 S L L I L L V C I L A Q S F N F V D I V N A Q T I T W F I I 180 59410 CT-TTAGCACCCTTTGCTTA-GTTTATTTTGTGGCTATACTAGT-GAAACTAATCGTACTCCTTTTGATTG-CCTGAAGCTGAAGT-GAA 59494 181 P L A P F A L V Y F V A I L A E T N R T P F D L P E A E A E 210 59495 CTTGTTGCAGGTTATAGTGTGAA-TATTCTAGTGGTCCTTT-GCTTTTTATTTTATTGCAGAATATGT-AATTTAATATT-TGGTCGTTT 59580 211 L V A G Y S V E Y S S G P F A F Y F I A E Y C N L I I W S F 240 59581 ACACA-ACTATTCTTTTTCTTGGAGGATGGTT-CCAAGTTTCTTATTTCCTTTTTA-AATGGTTTTATTTTATTTGCTTTAAAATA-ATG 59666 241 T T T I L F L G G W L P S F L F P F L N G F I L F A L K S M 270 59667 TTTATCCTAGCTTTATTTTGTTG-ATTAGAGCAGCACTCCG-AGATATCGTTGGGACCAATTAATGACATTAGCTGG-AGAGCCTTTTTA 59753 271 F I L A L F C C I R A A L P R Y R W D Q L M T L A W R A F L 300 59754 CCAAT-GTTTTGTTAGGGTGTTTTTTTGTTTATGCTTTTTTTAATTTTTATACTAATTTTTTACTT 59818 301 P I V L L G C F F V Y A F F N F Y T N F L L 322 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 30698 Protein: tr|Q3SAU1|Q3SAU1_PHYPO NADH dehydrogenase subunit 2 OS=Physarum polycephalum GN=nad2 PE=2 SV=1 @ 0 DNA length: 2928 Protein length: 488 1 Nt shifts: 63 ||| 2 Nt shifts: 0 Score: 1740 Length-adjusted: 3.57 30699 ATGTTTATTAGTTTTTA-GATACATTAAATACACTTAAACTACTAACATA-TCTGATTTATTATTTTTGACTATTTCATT-ATATTTATG 30785 1 M F I S F L D T L N T L K L L T I S D L L F L T I S I I F M 30 30786 ATTTTATA-GGTAGTTATCTAACATT-AAAGGTGGGATTAACTTTGG-TTTAGCAAGGTTTATACACG-GCTGTAATTTATAGTTTTATT 30871 31 I L S G S Y L T I K G G I N F A F S K V Y T T A V I Y S F I 60 30872 ATTTATATCTA-TTAACTTTTAATTT-TCTAATAAAAGCTA-TATTATTTTAATGATCT-GCTATGTTTTCTAGTAT-AATTTTGATTAT 30956 61 I Y I L L T F N L S N K S L Y Y F N D S A M F S S Y N F D Y 90 30957 ATTGTATT-AAATTTTCAAATTT-CTATATTTTTTTATGATTATTTC-TTGTTAGTTTA-TATGCTTA-ATTTCTAATAATCGCATTAAA 31041 91 I V S K F S N L L Y F F M I I F L L V L Y A Y I S N N R I K 120 31042 ACTACTTT-GAATATCCAATAATAGTTTTATTAGCAGTATTGGGAATGGTAATATTGTTGCGTTCTACTGATTTATAAATTATTTGGTTT 31130 121 T T F E Y P I I V L L A V L G M V I L L R S T D L - F I W F 149 31131 TTAACAAT-GAGTTACAATCTTTTGT-TTTTATACTTTGGCTGCTTATGA-ACAAATAGATCATACTTACAAACGAA-GCAGGTTTAAAA 31216 150 L T I E L Q S F C F Y T L A A Y R T N R S Y L Q T E A G L K 179 31217 TATTTCTA-TTTGGATCTATAGCAGT-TCTTTATATTTATTTGGTACCTCTAA-CTTTATTTATATACAGGATCTGTTAATTTTGATAGT 31303 180 Y F L F G S I A S S L Y L F G T S I L Y L Y T G S V N F D S 209 31304 ATAGT-GCTCTTTCTTATTTTCA-ATTGAAAATAA-TATATATTTCATATAGT-TTAGTTTTAATTCTTATAGT-TTATTTTTTAAACTC 31388 210 I A A L S Y F P I E N Q Y I F H I S L V L I L I S L F F K L 239 31389 GGTATAGCACT-TTTCATTTTTGGCTTCCTTTAGTTAT-ACCTATTCTTCTTCTAT-GTTACCTATTTATTTATTTA-TTACCAAAAATC 31474 240 G I A P F H F W L P L V Y T Y S S S I V T Y L F I L L P K I 269 31475 CA-TTATTTTATTTATTATATAAATT-ACATCTATAAGTTG-AGTTATATTATTTACTA-CCGATATTATTATCTTA-TTTATAGGTACT 31559 270 P L F Y L L Y K F T S I S L S Y I I Y L P I L L S L F I G T 299 31560 GTCTTTGCTTT-AAAGCAACTAATTA-AAAACATTCCTAGCTTATAGCGCATT-GCAAATACTGCGTTTTTTCTAGCACT-ATAATGTAT 31645 300 V F A F K A T N L K T F L A Y S A I A N T A F F L A P I M Y 329 31646 AA-TCAACATACTCTTTTTATGCTTTTATTTTTAT-TTATTTACTTATAGTATCTG-ATTACAATAGCTTTTTA-CCTATTTG-TTTTTG 31730 330 Q S T Y S F Y A F I F Y L F T Y S I L I T I A F L P I L F L 359 31731 ATTAAGTA-GATAATTCTTTAGCTTTCATTAACTG-CGTGACATGATATT-TTGAAAAAAGTTAATCCGTC-TTAGCAATTTTCTATGCA 31816 360 I K S D N S L A F I N L R D M I I L K K V N P V L A I F Y A 389 31817 TTAATGGCCTTGGT-TTTGCAGGAGTACCACA-TTACTAGGATTTTTTTCTAAATTATTTATTTA-TTATCTGCTTTATA-TTTTCAGCT 31902 390 L M A L G F A G V P P L L G F F S K L F I L L S A L S F S A 419 31903 TATTTACTTGTGCT-GTTTTATTAGCTTTTTCATTAATTAGTAGTTTTTATTATTTGCGTTA-GTTAAAATGTTATATTTCTCCTTTAT- 31989 420 Y L L V A V L L A F S L I S S F Y Y L R L V K M L Y F S F Y 449 31990 TTAAAAAATGCTTCTGTTATAGT-ATACCTGCTATACCTGCTAT-ATTATTACTATCTTTTCTGTAGTAGT-ATTTTTTTTAG-ATTTAT 32075 450 L K N A S V I S I P A I P A Y I I T I F S V V S I F F S I Y 479 32076 CCAACGTATTTTGCAATTTTATTAAAT 32102 480 P T Y F A I L L N 488 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 30744 Protein: tr|Q3SAU1|Q3SAU1_PHYPO NADH dehydrogenase subunit 2 OS=Physarum polycephalum GN=nad2 PE=2 SV=1 @ 0 DNA length: 2928 Protein length: 488 1 Nt shifts: 61 ||| 2 Nt shifts: 0 Score: 1526 Length-adjusted: 3.13 30745 ------ATATCT------GAT---TTA------TTA---------------------------TTTTTGACTATTTCATT-ATATTTATG 30785 1 M F I S F L D T L N T L K L L T I S D L L F L T I S I I F M 30 30786 ATTTTATA-GGTAGTTATCTAACATT-AAAGGTGGGATTAACTTTGG-TTTAGCAAGGTTTATACACG-GCTGTAATTTATAGTTTTATT 30871 31 I L S G S Y L T I K G G I N F A F S K V Y T T A V I Y S F I 60 30872 ATTTATATCTA-TTAACTTTTAATTT-TCTAATAAAAGCTA-TATTATTTTAATGATCT-GCTATGTTTTCTAGTAT-AATTTTGATTAT 30956 61 I Y I L L T F N L S N K S L Y Y F N D S A M F S S Y N F D Y 90 30957 ATTGTATT-AAATTTTCAAATTT-CTATATTTTTTTATGATTATTTC-TTGTTAGTTTA-TATGCTTA-ATTTCTAATAATCGCATTAAA 31041 91 I V S K F S N L L Y F F M I I F L L V L Y A Y I S N N R I K 120 31042 ACTACTTT-GAATATCCAATAATAGTTTTATTAGCAGTATTGGGAATGGTAATATTGTTGCGTTCTACTGATTTATAAATTATTTGGTTT 31130 121 T T F E Y P I I V L L A V L G M V I L L R S T D L - F I W F 149 31131 TTAACAAT-GAGTTACAATCTTTTGT-TTTTATACTTTGGCTGCTTATGA-ACAAATAGATCATACTTACAAACGAA-GCAGGTTTAAAA 31216 150 L T I E L Q S F C F Y T L A A Y R T N R S Y L Q T E A G L K 179 31217 TATTTCTA-TTTGGATCTATAGCAGT-TCTTTATATTTATTTGGTACCTCTAA-CTTTATTTATATACAGGATCTGTTAATTTTGATAGT 31303 180 Y F L F G S I A S S L Y L F G T S I L Y L Y T G S V N F D S 209 31304 ATAGT-GCTCTTTCTTATTTTCA-ATTGAAAATAA-TATATATTTCATATAGT-TTAGTTTTAATTCTTATAGT-TTATTTTTTAAACTC 31388 210 I A A L S Y F P I E N Q Y I F H I S L V L I L I S L F F K L 239 31389 GGTATAGCACT-TTTCATTTTTGGCTTCCTTTAGTTAT-ACCTATTCTTCTTCTAT-GTTACCTATTTATTTATTTA-TTACCAAAAATC 31474 240 G I A P F H F W L P L V Y T Y S S S I V T Y L F I L L P K I 269 31475 CA-TTATTTTATTTATTATATAAATT-ACATCTATAAGTTG-AGTTATATTATTTACTA-CCGATATTATTATCTTA-TTTATAGGTACT 31559 270 P L F Y L L Y K F T S I S L S Y I I Y L P I L L S L F I G T 299 31560 GTCTTTGCTTT-AAAGCAACTAATTA-AAAACATTCCTAGCTTATAGCGCATT-GCAAATACTGCGTTTTTTCTAGCACT-ATAATGTAT 31645 300 V F A F K A T N L K T F L A Y S A I A N T A F F L A P I M Y 329 31646 AA-TCAACATACTCTTTTTATGCTTTTATTTTTAT-TTATTTACTTATAGTATCTG-ATTACAATAGCTTTTTA-CCTATTTG-TTTTTG 31730 330 Q S T Y S F Y A F I F Y L F T Y S I L I T I A F L P I L F L 359 31731 ATTAAGTA-GATAATTCTTTAGCTTTCATTAACTG-CGTGACATGATATT-TTGAAAAAAGTTAATCCGTC-TTAGCAATTTTCTATGCA 31816 360 I K S D N S L A F I N L R D M I I L K K V N P V L A I F Y A 389 31817 TTAATGGCCTTGGT-TTTGCAGGAGTACCACA-TTACTAGGATTTTTTTCTAAATTATTTATTTA-TTATCTGCTTTATA-TTTTCAGCT 31902 390 L M A L G F A G V P P L L G F F S K L F I L L S A L S F S A 419 31903 TATTTACTTGTGCT-GTTTTATTAGCTTTTTCATTAATTAGTAGTTTTTATTATTTGCGTTA-GTTAAAATGTTATATTTCTCCTTTAT- 31989 420 Y L L V A V L L A F S L I S S F Y Y L R L V K M L Y F S F Y 449 31990 TTAAAAAATGCTTCTGTTATAGT-ATACCTGCTATACCTGCTAT-ATTATTACTATCTTTTCTGTAGTAGT-ATTTTTTTTAG-ATTTAT 32075 450 L K N A S V I S I P A I P A Y I I T I F S V V S I F F S I Y 479 32076 CCAACGTATTTTGCAATTTTATTAAAT 32102 480 P T Y F A I L L N 488 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 38437 Protein: tr|F2Y9T2|F2Y9T2_PHYPO NADH-ubiquinone oxidoreductase chain 3 OS=Physarum polycephalum GN=nad3 PE=2 SV=1 @ 0 DNA length: 756 Protein length: 126 1 Nt shifts: 7 ||| 2 Nt shifts: 0 Score: 655 Length-adjusted: 5.20 38438 ATGTCAGAATATATAAATGAATTAGTTAAAATAGC-TTTTTTATAATGATGTCCTTTGCTTTAGCCTTAATTCTTTTAGGTGCTGTTTAT 38526 1 M S E Y I N E L V K I S F F I M M S F A L A L I L L G A V Y 30 38527 GTTTTAAGTTTTACATCAAAAGTGGATTTGAA-AAATCATCTGCTTATGAGTGTGGCTTTCAACCTTTTCT-GAGACTAATTATCT-TTT 38613 31 V L S F T S K V D L E K S S A Y E C G F Q P F S E T N Y P F 60 38614 GAGGTACAATTTGCTTTGATAGCTATTTTGTTTCTTTTATTTGATAT-GAAATCCTTTTCCTTTACCCTTTATGCACAAGTATTTTAGAT 38702 61 E V Q F A L I A I L F L L F D I E I L F L Y P L C T S I L D 90 38703 TTTAATGAAAT-GAGATATTTTATCTAGTTCTCTTTTTTATCATTGTTACTCTAGGCTA-TTATATGAAATATCTCGCCATATTGTTAGT 38790 91 F N E I E I F Y L V L F F I I V T L G L L Y E I S R H I V S 120 38791 TTCTTTGAATATGATAAG 38808 121 F F E Y D K 126 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 36935 Protein: tr|F2Y9T3|F2Y9T3_PHYPO NADH-ubiquinone oxidoreductase chain 4 OS=Physarum polycephalum GN=nad4 PE=2 SV=1 @ 0 DNA length: 2886 Protein length: 481 1 Nt shifts: 59 ||| 2 Nt shifts: 0 Score: 1796 Length-adjusted: 3.73 36936 TATGATCTTTTGTTAAATTGTTTAATATA-TTTACTATAATCTCTTTATTTATTATACT-GCAAATAAAACTATAATGTT-CATAATTAT 37022 1 M T L L L N C L I I F T I I S L F I I P A N K T I M L H N Y 30 37023 TCCTTGCA-GCTTCTTTTATTATATTTATTAT-TCTATAGGATTATTACAAATACA-TTGTCTACATCTATTAT-ATAAATACTAATTA- 37107 31 S L A A S F I I F I T S I G L L Q I P L S T S I Y I N T N S 60 37108 TTTGTTCTGATGTCCTTTCA-TCTTTTGTGATAACTTATCT-TACATGTTAGATTTTATATA-GTAATTTATATTATTTTATCTACTTTT 37194 61 F V L M S F P S F V I T Y S Y M L D F I S V I Y I I L S T F 90 37195 TA-GGATGTTTAGTTGTCTTATT-ACTAGAGTAATTGAATATGT-CTTAAAGAAAAATATATATT-TTATTTTTTGTATTGTA-TTATTA 37279 91 L G C L V V L I T R V I E Y R L K E K Y I L L F F V L L L L 120 37280 GTAAATTGCTTTTCAACTTA-GAGATTTA-AACTTTTATTTATTTTTTGAAGCTTA-TTGATACCTGTTTT-GCTCTTATAGGAATTTGG 37365 121 V N C F S T L E I L N F Y L F F E A L L I P V F A L I G I W 150 37366 GGTTA-CAAATAGCTAAGATTTT-GCTGCTAATAA-TTCTTTTTATATACTTTATT-GGTTCTTTTTTTATGTTAACGGA-ATTGTTATG 37450 151 G S Q I A K I F A A N Q F F L Y T L F G S F F M L T G I V M 180 37451 ATAATTATTTA-ACAGGGACTACTAATATTTTAGTAATAAAAGGTTATTTATT-GAAGATCATATCGAAAAGATATTATTTCTTTTGTTT 37538 181 I I I L T G T T N I L V I K G Y L F E D H I E K I L F L L F 210 37539 TTTATAGGATTAAG-ATCAAAATTCCGATGATTCCTTTCCATTTATGGCTTCCTAAAGCCAT-GTTGAAGCTCCTACTACGGT-AGTGTT 37625 211 F I G L S I K I P M I P F H L W L P K A H V E A P T T G S V 240 37626 TTGTTAGCAGGAATCTT-TTAAAATTAGGTTCTTA-GGTTTTATACGCTTTCT-CTTTTCTTATTCCT-AATGCTTCTTTTTATTTCTA- 37710 241 L L A G I L L K L G S Y G F I R F S L F L F P N A S F Y F L 270 37711 CCATTAATATTATA-GTTGCTGTGATATCAATTATATTAGCTCT-TTTACAGTTTA-CGTCAAAATGATTTAAAAAGGATTATTGCTAC- 37796 271 P L I L S V A V I S I I L A S F T V L R Q N D L K R I I A Y 300 37797 TCATCTATTGCACATATGAATTTTTTAGTGGGC---TATTTTTGTAAAAGATTTATTAGTTTAACAGGTTCTTTATTATTGCAAAT-GCT 37882 301 S S I A H M N F L V G A I F V K D L L A L T G S L L L Q I A 330 37883 CATGGGTT-TCTTCTTCCGCTTTATTTTTAGCAAT-GGAATGTTATATGATGA-TATAAATCACGTAATATTTC-TATTATCGTGGTTTG 37968 331 H G L S S S A L F L A I G M L Y D R Y K S R N I F Y Y R G L 360 37969 TT-ACTGTTATGCCAATATTTTGTTTCTTCTTTTTTATTTTTTCTTTAGCGAATTTAGGGTTTCT-TCTACTGTTAATTTTATTCT-GAA 38055 361 V T V M P I F C F F F F I F S L A N L G F P S T V N F I S E 390 38056 ATGTTAATATTTTTTGGCTTATTTCAAACAGTCCT-TCTATAGCTATTTA-ACTTTAACAGGTATTTC-TTATCTGCAGT-TATTCTTTT 38141 391 M L I F F G L F Q T V P S I A I L T L T G I F L S A A Y S F 420 38142 GTTTTACTTACTCGCAT-GCTTTTGGTCCTGCAAGCCA-TTTCTTTCTGTTTATAT-GATTTGACTCGCCGAGAATTTTATATTTTATTA 38228 421 V L L T R I A F G P A S P F L S V Y Y D L T R R E F Y I L L 450 38229 CT-TTAGCTTTTCTTATATT-TTCCTAGGATTATTTCCTAT-TATTTGACTCA-TATTGGACCTTTGGTTTGGTTACTGG-TTTAATATA 38313 451 P L A F L I I F L G L F P T Y L T S Y W T F G L V T W F N I 480 38314 ACT 38316 481 T 481 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 35787 Protein: tr|Q3SAU0|Q3SAU0_PHYPO NADH dehydrogenase subunit 4L OS=Physarum polycephalum GN=nad4L PE=4 SV=1 @ 0 DNA length: 570 Protein length: 95 1 Nt shifts: 12 ||| 2 Nt shifts: 0 Score: 316 Length-adjusted: 3.33 35788 ATGATAACACT-TTATCTCTTTCTTTTATGTT-ATAATATTTGCTCTTATGATCATAACCTTAAA-CCAAATCTGCTTTTCGTATT-TTT 35873 1 M I T T L S L S F M F I I F A L M I I T L K P N L L F V L F 30 35874 GCATTAGAAATTATTTA-TTAGGTGTTAATATAAC-TTTATAATGGCTCT-TTAGTGTTGAT-GATTTTTTAGGTAAATATATAGTATG- 35958 31 A L E I I L L G V N I N F I M A S L V L D D F L G K Y I V L 60 35959 ATATTATTTTCAGTGCT-GCTCTTGATACAAGTAT-GGTTTAATTTTACTATTAAATTATTATGGATC-CACAATATAACTCGTATTACA 36045 61 I L F S V A A L D T S I G L I L L L N Y Y G L H N I T R I T 90 36046 GCGAATATAAAGGTT 36060 91 A N I K G 95 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 17257 Protein: tr|F2Y9T4|F2Y9T4_PHYPO NADH-ubiquinone oxidoreductase chain 5 OS=Physarum polycephalum GN=nad5 PE=2 SV=1 @ 0 DNA length: 3936 Protein length: 656 1 Nt shifts: 76 ||| 2 Nt shifts: 0 Score: 2642 Length-adjusted: 4.03 17258 AATGTTTTCATGTTTCCTTA-ATAGCATTTATAATTCTTTTTATGTTAGGTAGACATCTGGGAAG-CAAATTGT-CTCGGCTTTGCTATT 17344 1 M S F M F P L I A F I I L F M L G R H L G K Q I A L G F A I 30 17345 ACAATGTCATTTTA-TCACTTATAATTGT-TTATATTATTTTATTCATGTTTTTTTTAT-GGTCAAATATA-AGCTTTAATTTAGGTTCT 17430 31 T M S F L S L I I C L Y Y F I H V F F Y G Q I Y S F N L G S 60 17431 TGGGTTTCTGTAGGTACTTTAGATATTACTAC-AAATTTATAAT-GATCCTTTATCCATTACTTT-GGTACATTAATTCC-TTTATTACT 17516 61 W V S V G T L D I T Y K F I I D P L S I T F G T L I S F I T 90 17517 TTATTAATCTA-ATTTATTCTTATGATAT-TTACATGAAGATCCTAATTA-GTTAAATTTTTTGCTTATTTAGT-TTTTTCTCTTTTTCT 17602 91 L L I L I Y S Y D Y L H E D P N L V K F F A Y L S F F S F S 120 17603 ATGTT-TGTCTTGTTTTTGCTGGTAATTACTT-ATTATGTTTTTAGGATGGGAAGCTGTGGA-TTAGCTTCTTATTT-CTTATTAATTTC 17688 121 M S C L V F A G N Y F I M F L G W E A V G L A S Y L L I N F 150 17689 TGGAT-ACAAGAAATCAAGCAAT-CAGTCTGCTATTAAAGCAATTATTTTTAATCGTGA-GGTGATGCAGCTTTCATAAGTGCTATGGGT 17775 151 W T T R N Q A N Q S A I K A I I F N R V G D A A F I S A M G 180 17776 CTTATTTATTATTT-TTTAATTCTTT-GATTTAGAAGATTTAGAATTACTTGTTCA-CAATATGAACATACTACTTTTAGCTT-TTTTCA 17861 181 L I Y Y L F N S F D L E D L E L L V P Q Y E H T T F S L F S 210 17862 TATTCTTTTCA-ACAATTGAATG-ATAGCTCTTTTCCTATTTTTGCT-GCTGT-GCTAAATCAGCACAATC-TTTTTACATCCTTGGTTA 17946 211 Y S F H T I E L I A L F L F L A A A A K S A Q L F L H P W L 240 17947 CCTGATGCTATGAA-GGACCTACACCAGTTTCAGCATTATTACATTCTGCTACATG-GTAACAGCAGGTGTTTC-TTAATATTAAGATCT 18033 241 P D A M E G P T P V S A L L H S A T M V T A G V F L I L R S 270 18034 CT-GTTATTTTCTCACATGCTCCTTATATTTCATTATTGTA-GCTTGTATTGGCCTAATACA-GCTAATATTTCTTCTTTAACAGGTTA- 18119 271 S V I F S H A P Y I S L L V A C I G L I T A N I S S L T G L 300 18120 TTACAATATGACATAAAACGTATTAT-GCATTTTCAACCTGTAGCCAACTTGGTTT-ATGATGTTTGCTAT-GGTATTGGTAATTATACT 18206 301 L Q Y D I K R I I A F S T C S Q L G F M M F A T G I G N Y T 330 18207 TT-GCTTTATTTCATTTAGTAAATAT-GCTTTCTTTAAAGCACTCTTATTTTA-TGTGCCGGATCCGTTATCCACGCTACCGGCCATCAG 18293 331 F A L F H L V N H A F F K A L L F L C A G S V I H A T G H Q 360 18294 GATATTCGGCGTATGGGAGT-TTATTTAAAGA-TTACCCATAACTTATGTTGCAATGCTCTTGCT-TCTTTATCTTTAATTGGTTTTCT- 18379 361 D I R R M G A L F K A L P I T Y V A M L L A S L S L I G F P 390 18380 TTCTTAAGTGGTTTTTATAG-AAGGATTTTCTTCTAGAAGCTACTTACAATATATTTGGTATGTC-TCTTATGTTATTTATTTTATATCC 18467 391 F L S G F Y S K D F L L E A T Y N I F G M F S Y V I Y F I S 420 18468 AT-ATTTCTACTGCTGTTAGTTA-TTTTACTCTTTCCGATTAATTTTCTTTGTGTTCTTGGT-GATCAAGCATA-TCAATAAAAACATTG 18553 421 T I S T A V S S F Y S F R L I F F V F L G D Q A S S I K T L 450 18554 AAAACTATTCT-GAAAGCTCCTATTTTCTATATCTACA-TTAATTATTTTAACTATACTTTCTATTTTTCT-GGATTTTATTTAAAAGAT 18640 451 K T I S E S S Y F L Y L P L I I L T I L S I F S G F Y L K D 480 18641 TG-ATGACTATTCAAACATCTTA-TATAATTTTAGTGCCTCTCT-TTCAGTGATACAGCTACTGATCAAGATTC-TTTAATGATTTATTT 18726 481 L M T I Q T S L Y N F S A S P F S D T A T D Q D F F N D L F 510 18727 AAAGTTTA-CCCACAATCTTTTCTTTATCGGT-TTACTTTTAGTATATATAATTTATTG-AAATTAAACTTAAAAAGTCAACTATTATAT 18813 511 K V L P T I F S L S G L L L V Y I I Y L K L N L K S Q L L Y 540 18814 AGACAATACTA-TTATTACCTTATTT-TCTTGTAAAAAATTCTTTGA-GATGCTTTTAATAGTTTTTATATTTC-TTACCATCTGCAACT 18899 541 R Q Y L L L P Y L S C K K F F A D A F N S F Y I F L P S A T 570 18900 TTTCT-TTAAATATACT-TATAAAATTATAGATAA-GGTGTTTTAGAACATTTAGGTTCAACGGGTATTAT-GCTTTTCTTGAATT-ATT 18984 571 F S L N I T Y K I I D Q G V L E H L G S T G I Y A F L E S I 600 18985 TTTGAAAGTATTGTTAATGTGAA-ACAACCTTAATAATTAT-CGTTCTTTTCTTTTCATAATCTTTGTCCTCGGAGCTACATTATA-ATT 19071 601 F E S I V N V E T T L I I Y R S F L F I I F V L G A T L S I 630 19072 TTTTATGGTTTATACGCTTTTCTTATAGCAATTTTCTTTATTAGTACTCTTAATATTTTTAATACCGAAATCACTTCA 19149 631 F Y G L Y A F L I A I F F I S T L N I F N T E I T S 656 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56282 Protein: tr|Q3SAT9|Q3SAT9_PHYPO NADH-ubiquinone oxidoreductase chain 6 OS=Physarum polycephalum GN=nad6 PE=2 SV=1 @ 0 DNA length: 990 Protein length: 165 1 Nt shifts: 16 ||| 2 Nt shifts: 0 Score: 640 Length-adjusted: 3.88 56283 ATGCTTTTAAGT---TTATATTTTTCTCTTATTATTATATATACAGTAACACCAAATGCTATCAT-GCATTATTAGCTTTAATTTTATTA 56368 1 M L L S F I F F S L L L Y I T V T P N A I H A L L A L I L L 30 56369 TTCATAAC-TTCTCATTTCTATTATTTTTAACGAT-TCAGCTTTCTTAGGATT-GCTTATATTTTAGTTTATAT-GGTGCTATTTGTGTA 56454 31 F I N F S F L L F L T D S A F L G F A Y I L V Y I G A I C V 60 56455 CTATTTTT-TATATAATATTACTTCA-CATTTACGCTCATACACGCTTATGCAACGTCAAAATTCCATTTTATTATTATT-TTAATTTTT 56541 61 L F L Y I I L L L H L R S Y T L M Q R Q N S I L L L S L I F 90 56542 ATATTTTTAATATA-ATGACTTTTTTATTTAGCGATACAAT-CTCGAGATTGTATT-TTCTCTAATTATCTTTTAAATGATTA-GAACTT 56627 91 I F L I S M T F L F S D T N L E I V S F S N Y L L N D L E L 120 56628 TTTACCTCATATTC-TTTAAAACACACAA-CATTATATGTTTTTAAGTATTTTTCTTTTATTATTGCA-TTATTCTTATT-GTATTTTTA 56713 121 F T S Y L F K T H Q H Y M F L S I F L L L L A L F L S V F L 150 56714 TCTACTAAATTTGTCGGATATAATAAAACAACTGCTATAATTTTA 56758 151 S T K F V G Y N K T T A I I L 165 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27673 Protein: tr|Q9GCR5|Q9GCR5_PHYPO NADH dehydrogenase subunit 7 OS=Physarum polycephalum GN=nad7 PE=2 SV=1 @ 0 DNA length: 2406 Protein length: 401 1 Nt shifts: 51 ||| 2 Nt shifts: 0 Score: 1658 Length-adjusted: 4.13 27674 ATGCCATA-TTAAAAAACTATTA-ATTAATTTTGGACCACAACATCA-GCAGCACATGGTGTTTTAAGAATGGTGTT-GAATTAAATGGT 27759 1 M P S L K N Y L I N F G P Q H P A A H G V L R M V V E L N G 30 27760 GAGGTATA-CAGAATTGCGATCCACATAT-GGGCTTCTACATGA-GGTACTGAAAAACTTATAGAACATAAGAATTTCTTACAATCTTC- 27845 31 E V I Q N C D P H I G L L H R G T E K L I E H K N F L Q S L 60 27846 CT-TATTTTGATGT-CTTGATTATGTATCATG-ATGGCACAAGAACATGCTAT-TCTTTAGCTGTAGAAAATTTATT-AATGATTTATGT 27930 61 P Y F D R L D Y V S M M A Q E H A Y S L A V E N L F N D L C 90 27931 GCTAAAGCATTATA-CCTTATATAGATATACA-GAAAGGGCTCGCTATATTCGTGTCTG-TTTTTAGAAATTACTAGAATTTTAAATCAT 28017 91 A K A L L P Y I D I P E R A R Y I R V L F L E I T R I L N H 120 28018 TTATTAGCTGTACG-ACACATGCTATGGATGTTGGTGCCTTAACACCATTTCTGGG-CT-TTTGAAGAGCGAGAAAAATTGAT-GAATTT 28103 121 L L A V T T H A M D V G A L T P F L W A F E E R E K L I E F 150 28104 TATGAACGTGTATCGGT-GCAAGAATGCATACAGCATACATTCGACCAGGAGGAGTAGCATATGA-TG-CCTATTGGTTTATTAAATGAT 28190 151 Y E R V S G A R M H T A Y I R P G G V A Y D L P I G L L N D 180 28191 ATTAT-GAATTTTTAACACT-TTCTCTAAAAAGTTAAATGA-ATGGAAGAATTACTAACAGATAATCGAATATTTAAAGATCGTTG-TA- 28275 181 I Y E F L T P F S K K L N D M E E L L T D N R I F K D R V V 210 28276 AATATAGGAAAAGTTACATA-GATGTTGCTAAAGATAT-GCTTTTTCTGGTGTTATGGTTCGAGGTAG-GGTATACCTTATGATTC-CGT 28361 211 N I G K V T Y D V A K D H A F S G V M V R G S G I P Y D L R 240 28362 AAAATTTATAATTATGAAAATTATAA-GAATTTAATTTTAAAATACCTGTAGGTTTGAA-GGAGATTGTTATGACCGTTTTATGATTAGG 28449 241 K I Y N Y E N Y N E F N F K I P V G L N G D C Y D R F M I R 270 28450 GTTACTGAAATGAGAGAAAGTTGCTCCATAATTGCTCAAGTTTGTGAACGAATTACAGATGGTTTTATAACTGTTCC-TT-GCTAAATTT 28537 271 V T E M R E S C S I I A Q V C E R I T D G F I T V P F A K F 300 28538 GTTAACCA-ACTCGTTCTGATATGAAACATTTATG-GAAGCTTTGATCAA-CATTTTAAATTTTTCTCTAA-GGTATTATAGTTCCTGAA 28623 301 V N P T R S D M K H L M E A L I Q H F K F F S N G I I V P E 330 28624 GCTATATG-TATACAAGTGTGAA-GCTCCAAAAGGAGAATT-GGTACTTTAATTGCGTCTTACAA-AATAATACCAAACCTTATGT-TGT 28708 331 A I M Y T S V E A P K G E F G T L I A S Y Q N N T K P Y R C 360 28709 CATATACGTGT-CCAGGATTTCATCATTA-GCTGCTATTAATGA-GTTTCTCAAAATCATTCTTTAGCTGATGTGTT-GCCATTAT-GGT 28793 361 H I R A P G F H H L A A I N R V S Q N H S L A D V V A I I G 390 28794 ACTCTTGATATTGTCTT-GGTGAAGTTGATAGA 28825 391 T L D I V F G E V D R 401 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 27673 Protein: tr|Q9GCR5|Q9GCR5_PHYPO NADH dehydrogenase subunit 7 OS=Physarum polycephalum GN=nad7 PE=2 SV=1 @ 0 DNA length: 2406 Protein length: 401 1 Nt shifts: 51 ||| 2 Nt shifts: 0 Score: 1658 Length-adjusted: 4.13 27674 ATGCCATA-TTAAAAAACTATTA-ATTAATTTTGGACCACAACATCA-GCAGCACATGGTGTTTTAAGAATGGTGTT-GAATTAAATGGT 27759 1 M P S L K N Y L I N F G P Q H P A A H G V L R M V V E L N G 30 27760 GAGGTATA-CAGAATTGCGATCCACATAT-GGGCTTCTACATGA-GGTACTGAAAAACTTATAGAACATAAGAATTTCTTACAATCTTC- 27845 31 E V I Q N C D P H I G L L H R G T E K L I E H K N F L Q S L 60 27846 CT-TATTTTGATGT-CTTGATTATGTATCATG-ATGGCACAAGAACATGCTAT-TCTTTAGCTGTAGAAAATTTATT-AATGATTTATGT 27930 61 P Y F D R L D Y V S M M A Q E H A Y S L A V E N L F N D L C 90 27931 GCTAAAGCATTATA-CCTTATATAGATATACA-GAAAGGGCTCGCTATATTCGTGTCTG-TTTTTAGAAATTACTAGAATTTTAAATCAT 28017 91 A K A L L P Y I D I P E R A R Y I R V L F L E I T R I L N H 120 28018 TTATTAGCTGTACG-ACACATGCTATGGATGTTGGTGCCTTAACACCATTTCTGGG-CT-TTTGAAGAGCGAGAAAAATTGAT-GAATTT 28103 121 L L A V T T H A M D V G A L T P F L W A F E E R E K L I E F 150 28104 TATGAACGTGTATCGGT-GCAAGAATGCATACAGCATACATTCGACCAGGAGGAGTAGCATATGA-TG-CCTATTGGTTTATTAAATGAT 28190 151 Y E R V S G A R M H T A Y I R P G G V A Y D L P I G L L N D 180 28191 ATTAT-GAATTTTTAACACT-TTCTCTAAAAAGTTAAATGA-ATGGAAGAATTACTAACAGATAATCGAATATTTAAAGATCGTTG-TA- 28275 181 I Y E F L T P F S K K L N D M E E L L T D N R I F K D R V V 210 28276 AATATAGGAAAAGTTACATA-GATGTTGCTAAAGATAT-GCTTTTTCTGGTGTTATGGTTCGAGGTAG-GGTATACCTTATGATTC-CGT 28361 211 N I G K V T Y D V A K D H A F S G V M V R G S G I P Y D L R 240 28362 AAAATTTATAATTATGAAAATTATAA-GAATTTAATTTTAAAATACCTGTAGGTTTGAA-GGAGATTGTTATGACCGTTTTATGATTAGG 28449 241 K I Y N Y E N Y N E F N F K I P V G L N G D C Y D R F M I R 270 28450 GTTACTGAAATGAGAGAAAGTTGCTCCATAATTGCTCAAGTTTGTGAACGAATTACAGATGGTTTTATAACTGTTCC-TT-GCTAAATTT 28537 271 V T E M R E S C S I I A Q V C E R I T D G F I T V P F A K F 300 28538 GTTAACCA-ACTCGTTCTGATATGAAACATTTATG-GAAGCTTTGATCAA-CATTTTAAATTTTTCTCTAA-GGTATTATAGTTCCTGAA 28623 301 V N P T R S D M K H L M E A L I Q H F K F F S N G I I V P E 330 28624 GCTATATG-TATACAAGTGTGAA-GCTCCAAAAGGAGAATT-GGTACTTTAATTGCGTCTTACAA-AATAATACCAAACCTTATGT-TGT 28708 331 A I M Y T S V E A P K G E F G T L I A S Y Q N N T K P Y R C 360 28709 CATATACGTGT-CCAGGATTTCATCATTA-GCTGCTATTAATGA-GTTTCTCAAAATCATTCTTTAGCTGATGTGTT-GCCATTAT-GGT 28793 361 H I R A P G F H H L A A I N R V S Q N H S L A D V V A I I G 390 28794 ACTCTTGATATTGTCTT-GGTGAAGTTGATAGA 28825 391 T L D I V F G E V D R 401 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41519 Protein: tr|B6DQM1|B6DQM1_PHYPO NADH dehydrogenase subunit 9 OS=Physarum polycephalum GN=nad9 PE=2 SV=1 @ 0 DNA length: 990 Protein length: 165 1 Nt shifts: 23 ||| 2 Nt shifts: 0 Score: 594 Length-adjusted: 3.60 41520 ATGTTTATAAT-AAAGATCAATA-TTTTATTTATTATT-AATAAATCTTTAGTATCCATTAAACTTTA-TGCAATGATATTCT-ATTAAA 41604 1 M F I N K D Q S F Y L L S N K S L V S I K L L C N D I S I K 30 41605 CCTAAGAATTTGTTAGATAT-GTTAATTTTCTAAAAAAAAATACATATTA-TTAATTACAGCTACGCT-ATTGATCAAATAAATAAATTT 41691 31 P K N L L D I V N F L K K N T Y L L I T A T A I D Q I N K F 60 41692 AACGT-TTTTTATTATA-TATGTCTTTGTACT-TATACAAAAGCACAGCATATTAT-TTAACATATAATACAAT-TTAACAACACCATT- 41775 61 N R F L L S Y V F V T Y T K A Q H I Y L T Y N T N L T T P S 90 41776 ATAATTGATTTATTTCCATCAGCATT-TGGCTTGAACGTGAAATTAC-GATTTATTTGGTATATTTTTTTCTAATAG-AACAATACTAAT 41862 91 I I D L F P S A I W L E R E I Y D L F G I F F S N S N N T N 120 41863 GATTT-CGTCGAATATTAACTGATTATAT-TTCAAAGGACATCT-TTACGTAAGGATTTTTCTTA-ATAGGGTATCAAGAAAAAGTGTTT 41948 121 D L R R I L T D Y H F K G H P L R K D F S L I G Y Q E K V F 150 41949 TCCTATTTACA-AAGACCATTCGGAGTAAGAT-GAAGTAATTTTT 41991 151 S Y L T K T I R S K I E V I F 165 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 19299 Protein: tr|F2Y9T5|F2Y9T5_PHYPO NADH dehydrogenase subunit G OS=Physarum polycephalum GN=nadG PE=2 SV=1 @ 0 DNA length: 2124 Protein length: 354 1 Nt shifts: 47 ||| 2 Nt shifts: 0 Score: 1301 Length-adjusted: 3.68 19300 ATGGGTGCTTTAACTTT-AAACATAAGCAATTCACTTTCGA-GTTTGGGAACCACAAACATT-ATTGAAATAGATGAAACGAG-GTTTCT 19385 1 M G A L T S K H K Q F T F R V W E P Q T F I E I D E T E V S 30 19386 AAATATAACTTAAGATG-GAACATTTAAAAACTAAGGA-TCTCGTATTTTACA-ATTAATTATTGGATGGCAGATAAAAAACGTTTTCA- 19471 31 K Y N L R S E H L K T K R S R I L P I N Y W M A D K K R F S 60 19472 AAAGAATCATA-TTATTTTCTAATCCATT-ATTCATTTTAAGAATTA-ACATATTTTATTTTGAA-TATACTCTTCAAGAATT-AAAAAC 19556 61 K E S S L F S N P S I H F K N L T Y F I L E Y T L Q E S K N 90 19557 ATTACCTATCTAATTTCTAATATAAAGGT-TATAAGAAAATTTA-AATAAACTTGTTGATATACT-ATCAATAATATCAAAACCTTTTGT 19643 91 I T Y L I S N I K G Y K K I L N K L V D I T I N N I K T F C 120 19644 GCAAA-CAAATGACAAAGAT-TTAATAACTAGGTTAGAGATTAT-GATGACCTTTTAACAAGTAT-AAAAAATTGCCTAGATT-ATAATT 19728 121 A K Q M T K T L I T R L E I Y D D L L T S H K K L P R S I I 150 19729 TCTAGTTT-GATCACAAAATAAAACATGA-AATATTATTCTCCTAACAAT-CCTAGAACAGAATA-CCCATGTTTAATTCTTATTTATTT 19814 151 S S F D H K I K H D N I I L L T N P R T E S P M F N S Y L F 180 19815 AAACATGC-GATAAATTCTCCTTTATCTCATTTTCTGCTTTTGCTTCAAT-TTTATTAAACAAGAGATTCT-TTAACAACTAT-ACTATT 19900 181 K H R D K F S F I S F S A F A S N F I K Q E I P L T T Y T I 210 19901 GATGCTTA-TTTAAAGGACATTATGATTT-TCAAATGTCACAATAGTACA-TCATGTTTTAATACTTTATA-TTTCCTTATAATGATAAT 19986 211 D A S F K G H Y D L S N V T I V T S C F N T L S F P Y N D N 240 19987 ATTATTTCTTTAAA-CCGCTATATATTAATAAAACGATCAATATTTACTT-AAAGAAAAACAATA-GGAATTAATTTCTATCTTTTTCTT 20073 241 I I S L T P L Y I N K T I N I Y S K E K Q S G I N F Y L F L 270 20074 AAATT-AATAAAACTTTCCAACA-GCATTTTTATCTTTAAATATAAATAA-GAAAATATTAACTT-TGTTTAGGACAAAATAGCTTTGAT 20159 271 K S N K T F Q P A F L S L N I N Q E N I N L C L G Q N S F D 300 20160 AA-TTCATTTTAAGAAAAGTTAGTAA-AGATATTTAGAACGCTA-TTTTTGTTATATTTAATTATTAAACT-AAACAAATCAACTCTTA- 20244 301 Q F I L R K V S Q R Y L E R L F L L Y L I I K P K Q I N S L 330 20245 GTTCTTCTTGCAAATACAACAACACT-ACCAAATATGATTTATA-CTATTATCACAAACGATTACATTATTT 20314 331 V L L A N T T T T T K Y D L S L L S Q T I T S I 354 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 29775 Protein: tr|F2Y9T6|F2Y9T6_PHYPO Hypothetical mitochondrial protein 22 OS=Physarum polycephalum GN=php22 PE=2 SV=1 @ 0 DNA length: 1824 Protein length: 304 1 Nt shifts: 38 ||| 2 Nt shifts: 0 Score: 1217 Length-adjusted: 4.00 29776 ATGAAAAAAAGATATGGACTGAA-TCTATCATTGGGAAGAATTCTTCTTTACGTTTTCCTCGATA-GTATCCATAGAAGATATAACAACT 29863 1 M K K R Y G L E S I I G K N S S L R F P R L V S I E D I T T 30 29864 ATAAA-AGTATTCTTCA-GCAAATAGCGAAGAAATAGAATCTCT-TTAAATAT-GCGCTTACTATGAAAAATGCAGATCG-GAAGAAGCG 29948 31 I N S I L P A N S E E I E S S L N T A L T M K N A D P E E A 60 29949 TGTGATAA-TTTAATAATATTAGTGT-GAATATGATGATGAATTTCA-ATTAGAGTGAAAGTTATAATACAAGGTCT-ATATCATCAAT- 30033 61 C D Q F N N I S C E Y D D E F P I R V K V I I Q G S I S S I 90 30034 GAAGTTTTAGATCCTAGTATTTTTTCTCTTATATG-ATGGCCTTTGATATTACAGAGTCACCTAT-GAAAAATTTCGTGCTCT-ATTTCT 30120 91 E V L D P S I F S L I C M A F D I T E S P I E K F R A S I S 120 30121 GATATCTTATA-ACATTAACAAATTTTGCTTT-ATTAAGAATCCCCT-GATGAAAGTTATTTTGTATCGAC-TTAGTTGCTAATACTCGA 30206 121 D I L I T L T N F A F I K N P P D E S Y F V S D L V A N T R 150 30207 AT-CTCTTGAATAATATTATGTCTAT-AATTGTCGTCGTAAACGAATTAAACAATT-AACATTTTAAATATAAAACCTGG-TTAAAACCA 30292 151 T L L N N I M S Y N C R R K R I K Q S N I L N I K P R L K P 180 30293 TATCTATTAAT-ATAAAAAGTAT-ATTAACAAACAATATTATAT-AAACGGCTTTATCATTTTTGTTATAAAGCTTA-AAATATCAGAGA 30378 181 Y L L N I K S H I N K Q Y Y H K R L Y H F C Y K A L K Y Q R 210 30379 AAAGATTTATA-CCATTACTTTTTGAAGC-ATTGAATATTTTTATGATGTTTTTGAAGATTGGGAAGACGCATATGATTT-GCTTGGTTT 30465 211 K D L I P L L F E R I E Y F Y D V F E D W E D A Y D F A W F 240 30466 GACAA-CAATTATTATTTATAGATAATTA-CTTGAACTTTCATTATTAGT-GGTAAATTTACTAGTTTAACAAATGTCTTGAT-AATAAA 30551 241 D Q Q L L F I D N L L E L S L L A G K F T S L T N V L D N K 270 30552 TTATTAACACT-ATTGATGCATTACATCAACATTA-CTTTATAAAATAGCTGAAAATTTTGCTAG-ACTACTAAATTTGATTA-CTTGAT 30637 271 L L T P I D A L H Q H S L Y K I A E N F A S T T K F D L L D 300 30638 TCCTTTAAAATG 30649 301 S F K M 304 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39337 Protein: tr|F2Y9T7|F2Y9T7_PHYPO Hypothetical mitochondrial protein 23 OS=Physarum polycephalum GN=php23 PE=2 SV=1 @ 0 DNA length: 1008 Protein length: 168 1 Nt shifts: 22 ||| 2 Nt shifts: 0 Score: 674 Length-adjusted: 4.01 39338 ATGAAATCTCTAGTTTTTCT-AAATTTAATAAATT-ATATATTATCCTGATTTGCT-AATAAATTTATTTTATCGTT-TTTCAAGATATA 39423 1 M K S L V F S K F N K F I Y Y P D L A N K F I L S S F Q D I 30 39424 CAGACAAA-CCTAAATATTATATCTATTA-AAATATATTTTTTCCCAAGA-CGTAATTATAATTA-ATCGCTGTTAAAGCTTTATG-ATG 39508 31 Q T T P K Y Y I Y L K Y I F S Q R R N Y N Y I A V K A L M M 60 39509 TTAACCTCTGTTTTCCA-AAGAGATGTTA-ATGAATACTAAACTTATATA-TTAAAATATACGCCTACTGG-TGTCATTCGTT-ATTTAT 39593 61 L T S V F P K R C L M N T K L I I L K Y T P T R C H S V I Y 90 39594 TTAAGACTTAATTTTTATGATTTTATCCA-ACCATTAATTATTTTTCTTATAGACCTAGTGAGCCTTCGACGTT-ATGCATGGTCATTTA 39681 91 L R L N F Y D F I P T I N Y F S Y R P S E P S T V M H G H L 120 39682 AAAGAATG-AAGCATTTTATATTTCCTGGATTTATAAA-CATTTAAAATTGCT-CATTGGGAACGATTAGTAACTATTTCTTTTAATAA- 39767 121 K E S K H F I F P G F I K H L K L P H W E R L V T I S F N Q 150 39768 TCTTCGATTAATAATTT-TATCCTTTATTTTTTCATAAAACGCT-TATTTA--- 39816 151 S S I N N L Y P L F F H K T A Y L D 168 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39337 Protein: tr|F2Y9T7|F2Y9T7_PHYPO Hypothetical mitochondrial protein 23 OS=Physarum polycephalum GN=php23 PE=2 SV=1 @ 0 DNA length: 1008 Protein length: 168 1 Nt shifts: 22 ||| 2 Nt shifts: 0 Score: 692 Length-adjusted: 4.12 39338 ATGAAATCTCTAGTTTTTCT-AAATTTAATAAATT-ATATATTATCCTGATTTGCT-AATAAATTTATTTTATCGTT-TTTCAAGATATA 39423 1 M K S L V F S K F N K F I Y Y P D L A N K F I L S S F Q D I 30 39424 CAGACAAA-CCTAAATATTATATCTATTA-AAATATATTTTTTCCCAAGA-CGTAATTATAATTA-ATCGCTGTTAAAGCTTTATG-ATG 39508 31 Q T T P K Y Y I Y L K Y I F S Q R R N Y N Y I A V K A L M M 60 39509 TTAACCTCTGTTTTCCA-AAGAGATGTTA-ATGAATACTAAACTTATATA-TTAAAATATACGCCTACTGG-TGTCATTCGTT-ATTTAT 39593 61 L T S V F P K R C L M N T K L I I L K Y T P T R C H S V I Y 90 39594 TTAAGACTTAATTTTTATGATTTTATCCA-ACCATTAATTATTTTTCTTATAGACCTAGTGAGCCTTCGACGTT-ATGCATGGTCATTTA 39681 91 L R L N F Y D F I P T I N Y F S Y R P S E P S T V M H G H L 120 39682 AAAGAATG-AAGCATTTTATATTTCCTGGATTTATAAA-CATTTAAAATTGCT-CATTGGGAACGATTAGTAACTATTTCTTTTAATAA- 39767 121 K E S K H F I F P G F I K H L K L P H W E R L V T I S F N Q 150 39768 TCTTCGATTAATAATTT-TATCCTTTATTTTTTCATAAAACGCT-TATTTAGAC 39819 151 S S I N N L Y P L F F H K T A Y L D 168 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 42720 Protein: tr|F2Y9T8|F2Y9T8_PHYPO Hypothetical mitochondrial protein 24 OS=Physarum polycephalum GN=php24 PE=2 SV=1 @ 0 DNA length: 1350 Protein length: 225 1 Nt shifts: 26 ||| 2 Nt shifts: 0 Score: 921 Length-adjusted: 4.09 42721 ATGACTCCAGA-CTTCAAAAGACATTATA-GATATAGAACCTTT-ATACAATTATACTTACA-GAAACTAGAAGATTTCTTTATACAGGC 42806 1 M T P A L Q K T L L D I E P F I Q L Y L P E T R R F L Y T G 30 42807 CA-TATTTAAAACGAAAAAAACGTATTAAATATACTTA-AGAATAAGCGT-TTTGAAAAAAAATTAGTACAAAATGACTACGTCCTTACT 42893 31 P Y L K R K K R I K Y T L R I S A F E K K L V Q N D Y V L T 60 42894 TTGACGAATGACCTAAAAACATTCCG-AA-CTTAATACAGGTTG-TTACAATATAT-TATAAAAAGTTAAACAAGTA-TCTCTAACTTT- 42977 61 L T N D L K T F S E L N T G L L Q Y H Y K K L N K L S L T S 90 42978 GTTGCTCGTTTAAAAAGAGAGATTTTTTTCAT-ACTAACGAAATGCTTTATCTGAG-CATCGTTTTATGGATTTGCGTAATTA-AATTTG 43064 91 V A R L K R E I F F H T N E M L Y L T H R F M D L R N L N L 120 43065 AAAATGTTTCGTAATAA-TATCAAATTATTAGTTT-AGCACTTATGCACGTCCTTA-AATAAATTATTGTTTTTTAATATATTTCAAAAG 43151 121 K M F R N Q Y Q I I S F S T Y A R P L N K L L F F N I F Q K 150 43152 TC-AATGCATTTTCACTTAAGTTTCT-TCCTTAATATG-TATCATTATAAGAAATTTAAACGTTA-CGTGTTTATTACTA-GGTTTCCGA 43236 151 L N A F S L K F P S L I M Y H Y K K F K R L R V Y Y L G F R 180 43237 CTAATCTTGAAAAGGAAGAAAATGGATCT-TTATTAATCGGTTCGCCATTAATACGAAGTGG-TATAAACGAATTAGACATTTAAAAAGA 43324 181 L I L K R K K M D S L L I G S P L I R S R Y K R I R H L K R 210 43325 CGATATTTATTAAAAATTATAAGAGCTAAATTTAAGAGACTTTAT 43369 211 R Y L L K I I R A K F K R L Y 225 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 61223 Protein: tr|F2Y9S8|F2Y9S8_PHYPO ATP synthase subunit 9, mitochondrial OS=Physarum polycephalum GN=atp9 PE=3 SV=1 @ 0 DNA length: 498 Protein length: 83 1 Nt shifts: 8 ||| 2 Nt shifts: 0 Score: 340 Length-adjusted: 4.10 61224 CATGACTTTAAAGAAGATTTTGTAAATTCTATTTA-ACTTCTGGTAAAAGTAT-GGTGCTGGTTTAGCAACAAT-GGATTAGCAGGTGCT 61310 1 M T F K E D F V N S I L T S G K S I G A G L A T I G L A G A 30 61311 GGTACGGT-GTTGGTATTGTTTTTGGTTCTTA-GTTTTTGGTTTAAGCCGTAATCG-GCAGAAGAACAACGCTTATTTAAGTATGCATG- 61396 31 G T G V G I V F G S L V F G L S R N P A E E Q R L F K Y A M 60 61397 CTTGGGTTTGCTGTAACTGAAGCTGTGGC-CTTTTGGCTTTGATGATGGCTTTTTTGATTCTTTTTGGA 61464 61 L G F A V T E A V G L L A L M M A F L I L F G 83 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 38984 Protein: tr|F2Y9U0|F2Y9U0_PHYPO Ribosomal protein L14 OS=Physarum polycephalum GN=rpL14 PE=2 SV=1 @ 0 DNA length: 738 Protein length: 123 1 Nt shifts: 17 ||| 2 Nt shifts: 0 Score: 446 Length-adjusted: 3.63 38985 ATGCGATT-GGTACAGTTGTTAAAGTAGCGAT-AATTCCGGTCCATGTTC-CTTCGAATAATAAAAATATTAAGATT-CATCCTCAAGCT 39070 1 M R S G T V V K V A D N S G P C F L R I I K I L R S H P Q A 30 39071 ACAGCAAAATT-GGTGATCATGTTGTAGGTTT-GTATTATATACTCATAA-CAGATGAAATTTAAAGTGAA-AAAGGTTCTTTAGTCGT- 39155 31 T A K F G D H V V G S V L Y T H Q Q M K F K V E K G S L V R 60 39156 GCTATTTGTATAGA-ATAGCAAATTCTCATTTACGATA-GATGGACAACGATA-AGGTTTCAATATCCTGCTGTTGCATT-ATTACAAAA 39241 61 A I C I R I A N S H L R S D G Q R L R F Q Y P A V A I I T K 90 39242 AA-GGCGTTCCAAGAGGAACAAAAATATTTGGCCT-TTACCTAAAGAATTGCGTGAGAA-GGTTATATTCGTTTATG-TCTTTGGGTACA 39327 91 N G V P R G T K I F G P L P K E L R E Q G Y I R L M S L G T 120 39328 ---TCGCTT 39333 121 I A L 123 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 56912 Protein: tr|F2Y9U1|F2Y9U1_PHYPO Ribosomal protein L16 OS=Physarum polycephalum GN=rpL16 PE=2 SV=1 @ 0 DNA length: 1086 Protein length: 181 1 Nt shifts: 21 ||| 2 Nt shifts: 0 Score: 742 Length-adjusted: 4.10 56913 ATGAAAAAATTTCT-AATAATACTAAATTTAAACGACA-CATAAAATCAAAATATA-AAAGGAAATAAAGGCATTTTTCTTAGCGC-TTT 56998 1 M K K F P N N T K F K R P H K I K I I K G N K G I F L S R F 30 56999 TCTGTAGGTGTTGA-CTTAAAGCAAG-AGATATTTATCTTATGAACAGTTAGAGACTGCACGTAGAGTTATACA-CGTTTAGTTAAGCT- 57084 31 S V G V R L K A S R Y L S Y E Q L E T A R R V I T R L V K P 60 57085 AAAGAGCTTAAAAATAAAAAGAATTA-ACAATACTTAAAAGTAT-CAACAAAAATTCAGTGA-CAGACTAGAAGACCTAGAGT-AAACAA 57170 61 K E L K N K K N L T I L K S T Q Q K F S R Q T R R P R A K Q 90 57171 AAAAAATTCTC-TATATTCGATCTAACTA-TGCTTACCTCTACA-AAAAAACCTTTACAAGTTAGAATGGGAAAGGA-AAAGGGTCAATA 57256 91 K K F L Y I R S N L C L P L T K K P L Q V R M G K G K G S I 120 57257 GATAAATGGGTTTTTGCTGCTAATAAATT-AGAGTTATTTT-GAAATGACTCGACAAGA-TTTAAACTACGTAAAGTACATCGTTTATTA 57343 121 D K W V F A A N K S R V I F E M T R Q R F K L R K V H R L L 150 57344 AGTGTTTCCGT-GTTAAAATGCCGACAAAACTAAAAATAATTAT-CATCGATTACATACTCGTAGAGAAACTAATTTTGTATCCAAATAT 57431 151 S V S R V K M P T K L K I I Y H R L H T R R E T N F V S K Y 180 57432 ATA 57434 181 I 181 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34987 Protein: tr|F2Y9U2|F2Y9U2_PHYPO Ribosomal protein L19 OS=Physarum polycephalum GN=rpL19 PE=2 SV=1 @ 0 DNA length: 1146 Protein length: 191 1 Nt shifts: 20 ||| 2 Nt shifts: 0 Score: 722 Length-adjusted: 3.78 34988 ATGCAATCTTATTTTAT-TCATTACTTAAGACTAAGCTTAATTTATA-TCAATTACAGGTAAAAAACCTCATCTTGATTATAAGGA-GAA 35074 1 M Q S Y F T S L L K T K L N L L S I T G K K P H L D Y K R E 30 35075 CGCTTAACGGT-AAAGTACTTTCTGTTTTATTTGATAAAAGAACAACATCCTTTGAAGTCAGA---TTTTATAAAGAATCAAAAAAGCTT 35160 31 R L T G K V L S V L F D K R T T S F E V S D F I K T S K K L 60 35161 GA-TCAAATATTAGTGAAGTTAG-GTTAGAGATATATTTCAATATAACTT-ATAGGCTTGTGTAT-GCTCATAAAAAAGATCA-TTTGTT 35245 61 R S N I S E V Q V R D I F Q Y N F I G L C I A H K K D P F V 90 35246 ATTAATACTCT-TTTTTAATACGTAATACTTTTGATCGTACTCA-TATGAATTGCATGCGAATTA-TTTTCTCCTATAATTGAAAGTATC 35332 91 I N T S F L I R N T F D R T P Y E L H A N L F S P I I E S I 120 35333 AT-GTTCATTCTGCAGTAGAAAAATA-TTTTATATAACCAT-AGTAAATATTATTATTTACGTAAAAAACT-ATGCCCTTATCTACTATT 35418 121 H V H S A V E K L F Y I T H S K Y Y Y L R K K P M P L S T I 150 35419 AT-TTTGACTATGTTAT-GACATGTTTGATCATGACATTTA-CATGAAGAAGACTCTAACATAAAGCT-ATTGAAAAGAAAAGTTTAACT 35504 151 Y F D Y V I D M F D H D I L H E E D S N I K A I E K K S L T 180 35505 TCTAAAGAGAATTTAACAGCT------------ 35525 181 S K E N L T A S N K S 191 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34987 Protein: tr|F2Y9U2|F2Y9U2_PHYPO Ribosomal protein L19 OS=Physarum polycephalum GN=rpL19 PE=2 SV=1 @ 0 DNA length: 1146 Protein length: 191 1 Nt shifts: 20 ||| 2 Nt shifts: 0 Score: 785 Length-adjusted: 4.11 34988 ATGCAATCTTATTTTAT-TCATTACTTAAGACTAAGCTTAATTTATA-TCAATTACAGGTAAAAAACCTCATCTTGATTATAAGGA-GAA 35074 1 M Q S Y F T S L L K T K L N L L S I T G K K P H L D Y K R E 30 35075 CGCTTAACGGT-AAAGTACTTTCTGTTTTATTTGATAAAAGAACAACATCCTTTGAAGTCAGA---TTTTATAAAGAATCAAAAAAGCTT 35160 31 R L T G K V L S V L F D K R T T S F E V S D F I K T S K K L 60 35161 GA-TCAAATATTAGTGAAGTTAG-GTTAGAGATATATTTCAATATAACTT-ATAGGCTTGTGTAT-GCTCATAAAAAAGATCA-TTTGTT 35245 61 R S N I S E V Q V R D I F Q Y N F I G L C I A H K K D P F V 90 35246 ATTAATACTCT-TTTTTAATACGTAATACTTTTGATCGTACTCA-TATGAATTGCATGCGAATTA-TTTTCTCCTATAATTGAAAGTATC 35332 91 I N T S F L I R N T F D R T P Y E L H A N L F S P I I E S I 120 35333 AT-GTTCATTCTGCAGTAGAAAAATA-TTTTATATAACCAT-AGTAAATATTATTATTTACGTAAAAAACT-ATGCCCTTATCTACTATT 35418 121 H V H S A V E K L F Y I T H S K Y Y Y L R K K P M P L S T I 150 35419 AT-TTTGACTATGTTAT-GACATGTTTGATCATGACATTTA-CATGAAGAAGACTCTAACATAAAGCT-ATTGAAAAGAAAAGTTTAACT 35504 151 Y F D Y V I D M F D H D I L H E E D S N I K A I E K K S L T 180 35505 TCTAAAGAGAATTTAACAGCTTCTAATAAAAGC 35537 181 S K E N L T A S N K S 191 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23008 Protein: tr|F2Y9U3|F2Y9U3_PHYPO Ribosomal protein L2 OS=Physarum polycephalum GN=rpL2 PE=2 SV=1 @ 0 DNA length: 1608 Protein length: 268 1 Nt shifts: 37 ||| 2 Nt shifts: 0 Score: 1054 Length-adjusted: 3.93 23009 ATGAATAA-ATATCATATGCATA-GCTTATCATTTTTTTGATATTTA-CAAACTATAAAAAAAGTAAT-AAAATACAATCAAGAATTAAA 23094 1 M N Q I S Y A S A Y H F F D I L Q T I K K V N K I Q S R I K 30 23095 CT-TTAAGTTGTCGTTTAAAAAGTAAAGGTGGTGT-TTTAATGGACAAATAATCAT-CCACGTGT-GGTGATTACAGTAAACGTATATAC 23180 31 P L S C R L K S K G G R F N G Q I I H P R R G D Y S K R I Y 60 23181 GA-TATATTGATTT-AAACGTAATATTCTTCT-GAATATAAAGCTCTTGTATGCAT-TCACTATATGATCCAAC-CGTTCTGCTAATATT 23265 61 R Y I D F K R N I L P E Y K A L V C H S L Y D P N R S A N I 90 23266 GC-TTAGTTTGTTATCT-GTGGGAATTTTTTCTTATATTTTACAACA-ACCAAACTTCATACGGT-GATGTAATCATAAT-TTGTCACAA 23350 91 C L V C Y P V G I F S Y I L Q P T K L H T G D V I I N L S Q 120 23351 TCATA-ACAAACTTTGGTGATTCATTATCTTA-CAAGGAATACCTTCAGGAGG-TTAATTCATAA-ATTCAAGGTAAATTTACTAGAGCT 23436 121 S S T N F G D S L S L Q G I P S G R L I H N I Q G K F T R A 150 23437 GCGGT-TGTTCCACAATTTA-ATTAGAAAAGATTTTGATAA-GCTTTAACAAAACTAAA-TCTGGAGAACTTGT-TTCTTTCATACTTA- 23520 151 A G C S T I L I R K D F D Q A L T K L K S G E L R F F H T S 180 23521 GTGATAGCATCTTTAGGTTGTAT-GGTAATGAAAATCATTTCTTACGTAATAT-AAATATGCCGGCACTATACGTCGCTA-GGTAAAAGA 23607 181 V I A S L G C I G N E N H F L R N Y K Y A G T I R R L G K R 210 23608 CCTAGAACACGTCCTTCTTCTATGAATCCAGTGAT-CATCCTATGGGTGGCGT-ACTCGAGGTGGTGTACAGCCCATGAATAGAAAAGGT 23695 211 P R T R P S S M N P V D H P M G G R T R G G V Q P M N R K G 240 23696 ATATT-ACTTTACATGT-AAAACAGTTAAAAAACATAT-CCTAGTATACTTAT-ACTAAACGACAATTAAAATTATTACGTTAT 23775 241 I I T L H R K T V K K H H P S I L Y T K R Q L K L L R L 268 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40504 Protein: tr|F2Y9U4|F2Y9U4_PHYPO Ribosomal protein L6 OS=Physarum polycephalum GN=rpL6 PE=2 SV=1 @ 0 DNA length: 972 Protein length: 162 1 Nt shifts: 20 ||| 2 Nt shifts: 0 Score: 613 Length-adjusted: 3.78 40505 TATGATATTGCCTCTTCTTATCT-TTATTACAATTTAATGAAATAAT-AGCATTGAAGGTATTTA-AGTAAACAAAATTA-TTATTAAAA 40590 1 M I I A S S Y P L L Q F N E I N S I E G I L S K Q N L L L K 30 40591 AGCTTTTTAACAAAGAA-CCAAACAGTTTATTTATGGT-AAAAAACAAAATAAGTTATTATA-TCTTCAAATATAATAAG-AAAAAACAT 40676 31 S F L T K E P N S L F M A K K Q N K L L S S S N I I K K K H 60 40677 AATGGTTTTTTATA-GAGATATTATTTCATGGATT-AATTTCAGTGCTAAAAGATTTAAATTAGCGCGAAATAAATATTTTATAGATACG 40764 61 N G F L I E I L F H G F N F S A K R F K L A R N K Y F I D T 90 40765 CATAAATT-GAAGTATTTATTGT-GATGAACCTGTAAT-AGTACTTTTAAATCTCAAGTCAT-AAAAGAAGATTAATTTC-TTTAGTTAT 40849 91 H K S E V F I C D E P V T S T F K S Q V H K R R L I F F S Y 120 40850 GATAATCATTT-TTACATACCCTAGAAAAAGCTATAAA-CAATTTAAATTACA-GATTCTTATACGGT-AAAGGTTTGTTTGAACGTCAT 40935 121 D N H L L H T L E K A I K Q F K L P D S Y T G K G L F E R H 150 40936 GATCT-TATAAAATAAAACAACGTAAGAAAGTAAAT 40970 151 D S Y K I K Q R K K R K 162 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 41996 Protein: tr|F2Y9U5|F2Y9U5_PHYPO Ribosomal protein S11 OS=Physarum polycephalum GN=rpS11 PE=2 SV=1 @ 0 DNA length: 1506 Protein length: 251 1 Nt shifts: 32 ||| 2 Nt shifts: 0 Score: 930 Length-adjusted: 3.71 41997 ATGCTTAAAACTTTTGTAGA-GGTAGACTTTATCGTACAAAAATAAAGGT-CGAAGAAAATATAAAAAACCTACTTT-ATTCGCATAGT- 42082 1 M L K T F V R G R L Y R T K I K R R R K Y K K P T F I R I A 30 42083 AAACTTAGAAGAAAATTTAAAGA-AAGATAAAACGTTA-TTTGGTATAAAAAAAAT-AAACGTCGAAAAGA-AAAAGATATTTAAG-GAA 42167 31 K L R R K F K A K I K R S F G I K K T K R R K R K R Y L S E 60 42168 TCATATTTTCGTGA-TATATTTTTCCAAAAGGACGTCCTTA-TATAAAAGAAT-ATAAGGTTTAATGCCGATTA-CCCATATATTATAA- 42252 61 S Y F R R Y I F P K G R P L Y K R T I R F N A D L P I Y Y Q 90 42253 GAAGAAAATTCAATTTTAATGAAATA-CGACGAGATTTACGACGCAA-GAAGTAAATAGAATGTTAAC-AAACAGTTTAAGTCTGATATT 42339 91 E E N S I L M K L R R D L R R Q E V N R M L N K Q F K S D I 120 42340 ATTTT-ACACCATTATCAGAACGTTTCTTTTTTTT-GGTCGTATTTATCTTACACATCGTGT-CGAAATACTTTTATTACATT-AGTACT 42425 121 I F T P L S E R F F F F G R I Y L T H R R R N T F I T I S T 150 42426 ATAGCGAA-GATAAGTTAAATCTTGATGAGGA-GTTTTTTTTAAATCTTCTGT-GGTTTATTAGAATATAAAGGTCT-AAACGTTCTACA 42511 151 I A E D K L N L D E R V F F K S S C G L L E Y K G P K R S T 180 42512 TTAAT-GCTCGATTAGAAGTGCT-AAAGCTTGTGGTTA-TTTGTAGCACAAGCTGCATTCTCTTCGTT-GATATTATTTTTCCATCAGGT 42597 181 L H A R L E V A K A C G S F V A Q A A F S S V D I I F P S G 210 42598 GTGGGC---GTGTTTTTACCGTTTAGTAAGAGCTTAGTTGAAAGACAAATTAC-GTTCGATATTTGATATT-CCAAAAAGAAGATCACAT 42682 211 V G R V F T R L V R A L V E R Q I Y V R Y L I I P K R R S H 240 42683 GGCTTACT-AGAAAGAAAAAGGTTCGCCGTTTA 42714 241 G L T R K K K V R R L 251 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 21744 Protein: tr|F2Y9U6|F2Y9U6_PHYPO Ribosomal protein S12 OS=Physarum polycephalum GN=rpS12 PE=2 SV=1 @ 0 DNA length: 1032 Protein length: 172 1 Nt shifts: 22 ||| 2 Nt shifts: 0 Score: 700 Length-adjusted: 4.07 21745 AATGGTACTTTTTCTCAATATATTAAAAATAT-CGTCAAACAAAACAATTCCGATCATCACA-CCTCATTTTGAAGGAGT-CCTTTTAAA 21831 1 M V T F S Q Y I K N H R Q T K Q F R S S T P H F E G S P F K 30 21832 TATGT-ACTTGCATGGA-GTAGGAACAGTTAAACCAAG-AAACCTAATTCTGCAAA-CGCAAAATTACAAAAGTTTGTTA-ACTAATGGT 21916 31 Y A T C M R V G T V K P K K P N S A Q R K I T K V C L T N G 60 21917 GT-TATTTAATTGCTTATATACCAGGATTTGGTAT-AGATTACAAAAAAACAATGAAGTAATGATAGG-GGAGGTCGTGTACCTGATTA- 22002 61 R Y L I A Y I P G F G H R L Q K N N E V M I R G G R V P D L 90 22003 CCAGGTGTTCGATATCATGTATG-CGTTTAAAAAAAGATTTTATGTGGTTAGAAAA-ATTGATAGATATCAACGTGT-AGTAAATATGGT 22089 91 P G V R Y H V M R L K K D F M W L E N I D R Y Q R R S K Y G 120 22090 GTGGA-AATCCTAATCGTGT-CTTGATATTTTAAATCGTGA-GAAAAAAATAAAGCAAT-CGCCGTGAAAAGTC-AAGACATTACACAAA 22174 121 V G N P N R R L D I L N R R E K N K A N R R E K L K T L H K 150 22175 AT-GATAAAAAATTAATGAAAGAATC-TTTACAAAGCTTTCTGAAAATTTTCTCAAAATTACGAAT 22238 151 I D K K L M K E L F T K L S E N F L K I T N 172 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40977 Protein: tr|F2Y9U7|F2Y9U7_PHYPO Ribosomal protein S13 OS=Physarum polycephalum GN=rpS13 PE=2 SV=1 @ 0 DNA length: 1116 Protein length: 186 1 Nt shifts: 21 ||| 2 Nt shifts: 0 Score: 787 Length-adjusted: 4.23 40978 AATGATGATACTTCTTATTTATCACTTCAACCTCGTAA-TCCTGTGTGCT-AGTTTTCAAATATTCTA-GGTATTGGTAAAATAAAAGCA 41064 1 M I D T S Y L S L Q P R Q S C V A S F Q I F Y G I G K I K A 30 41065 ACAGA-TTAAATAGTTTTTA-CTTAATCATCCGTA-CAAACAAGATTTACATTTAATTTTAAAGAAGA-ATTTATCCTTCAACTGGTTTA 41150 31 T R L N S F L L N H P V Q T R F T F N F K E V I Y P S T G L 60 41151 GATATTTGGAAAAAAATACCAAAAGATATGAAAATTCGTTG-TGTGTGGAAAATAC-TTACGAAATAAAATCTTACA-TATTGTTATAA- 41236 61 D I W K K I P K D M K I R L C V E N H L R N K I L T Y C Y Q 90 41237 ATGTATCGTTTATTTCAAAATCTTCCTACAAAGGA-CAACGTACAAAAGCTAATGCAAT-GCCATTTATAATTA-AATCCTTATAAAGCT 41323 91 M Y R L F Q N L P T K G Q R T K A N A N A I Y N L N P Y K A 120 41324 TTGCAGGTAAT-ATTGTTTTTTATAT-GCATTAGAAGTGCA-TATAAAAAAAGAGAATTATTAAATAA-GAACGTTATGATGAGTTAAAA 41409 121 L Q V N I V F Y H A L E V A Y K K R E L L N N E R Y D E L K 150 41410 GCTTT-GAAGAGGCTAG-GCTCAGAAAGAAAAAATGAAAAAAGAAGACAA-AAACAAAAAAGCCGTAGATCTAGACAAGAATTTATTAAA 41496 151 A F E E A Q A Q K E K M K K E D Q K Q K S R R S R Q E F I K 180 41497 CATCAAAGACTTAAATCA 41514 181 H Q R L K S 186 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 39821 Protein: tr|F2Y9U8|F2Y9U8_PHYPO Ribosomal protein S14 OS=Physarum polycephalum GN=rpS14 PE=4 SV=1 @ 0 DNA length: 546 Protein length: 91 1 Nt shifts: 10 ||| 2 Nt shifts: 0 Score: 371 Length-adjusted: 4.08 39822 AATGATTCCATATTACAAAA-TCAATAAAAGATAAAAAACAAGT-ATGCAGTTTAAAGCGTA-GAAATGGAACGACGTTATTACAAGTTA 39908 1 M I S I L Q T S I K D K K Q R M Q F K A S E M E R R Y Y K L 30 39909 TG-AAATTACAAGT-ACTAATATTGGCTTTATGCCCTA-CGTACACTTCG-AAAGTTCAATTAAAAAATTATGT-CTTATAACAGGTAGA 39993 31 M K L Q A T N I G F M P L R T L P K V Q L K N Y C L I T G R 60 39994 GCACGTTA-ATTTATTCCAAAAAATTTAGAATTTCAAGAAC-CAAATAAAAGCTTATTTTACCTATATTTCTGGATTACGTAACTCATCC 40081 61 A R S I Y S K K F R I S R H Q I K A Y F T Y I S G L R N S S 90 40082 TGG 40084 91 W 91 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 34703 Protein: tr|F2Y9U9|F2Y9U9_PHYPO Ribosomal protein S16 OS=Physarum polycephalum GN=rpS16 PE=4 SV=1 @ 0 DNA length: 594 Protein length: 99 1 Nt shifts: 15 ||| 2 Nt shifts: 0 Score: 333 Length-adjusted: 3.36 34704 ATGAAAAGTATATT-AAAATAATAAAAAAGAATAT-AGACAAAAACTAGGTGT-TATAATAAAGAGTTAATAATACGTTTAGT-ATTAAA 34789 1 M K S I S K I I K K N H R Q K L G R Y N K E L I I R L A I K 30 34790 AGACGGTTAAA-TATAAACCGTG-TATCATTTGTT-TTAGCAAGAAGAAGATA-GGTGCTAGTGT-CGTTATGA-AATTTGGGCTTTTAT 34873 31 R R L K Y K P V Y H L V L A R R R S G A S C R Y D N L G F Y 60 34874 GAAGTCTTTAAAACAAATAAACA-TTTCATATATTAGGTCTTAATGT-AAGAAAATTAAAAATGCGATAGCTTA-GGAGCTTCGATTAT- 34959 61 E V F K T N K P F H I L G L N R K K I K N A I A L G A S I H 90 34960 ATTTCTGTTTATAAACTTTA-TTAAAT 34985 91 I S V Y K L L L N 99 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 20277 Protein: tr|F2Y9V1|F2Y9V1_PHYPO Ribosomal protein S2 OS=Physarum polycephalum GN=rpS2 PE=2 SV=1 @ 0 DNA length: 2820 Protein length: 470 1 Nt shifts: 57 ||| 2 Nt shifts: 0 Score: 1937 Length-adjusted: 4.12 20278 ATGATTTATAC-TATTATCACAAACGATTACATTA-TTTAAAATAACTTATAAAATATC-TTAGCATATAC-AGTCCTTTAGGAAACATT 20363 1 M I Y H Y Y H K R L H L F K I T Y K I L L A Y H S P L G N I 30 20364 GTAAAATTTTGGACCTCTTTCAT-ATGAATTCGTTTATTTA-GCAATTCGAAATGATATCAT-ATACTTAACATAACTTATACTATTATC 20450 31 V K F W T S F H M N S F I L A I R N D I H I L N I T Y T I I 60 20451 AA-ATAAGAAAAGCTTTAAATACATT-TTTCATAAAGTTCGTAT-AGAGGTTCCTTTACCATTTATGCACAAGCTTTTAAAGCTTTAAAA 20537 61 Q I R K A L N T I F H K V R Y R G S F T I Y A Q A F K A L K 90 20538 ATTAATAT-GGATCTATTTTTTCTTT-ATTACTGATTGGGTACCTGGTTT-CTAACAAATTATAAACGAGTAACAGA-GCTATTAGAGCT 20623 91 I N H G S I F S F I T D W V P G L L T N Y K R V T R A I R A 120 20624 AT-AAACTACATCTTGT-AGAACAGCTTATTTTCTTAAGGT-CCTCAACTTAAAGT-ATAGCCCACTCTTATTTTAATCCTATCCT-AAA 20708 121 Y K L H L A R T A Y F L K R P Q L K A I A H S Y F N P I P K 150 20709 TCCTCTTTATTCAAAAGAAGAAGACGTACTCT-CAAATACCAAAATTCCCAGCAATTCT-TTAAGTATTCTTGATAG-AATGTGTGGCTA 20795 151 S S L F K R R R R T P Q I P K F P A I S L S I L D S N V W L 180 20796 CATGAGTGTTTATGTTTACGTATTCCTTCATA-CAAATATGTGATAATCAAAGCAA-TTTGAAAAGGTAACATACCCTATATT-TCAAAT 20882 181 H E C L C L R I P S I Q I C D N Q S Q F E K V T Y P I I S N 210 20883 CAACGATCGATGGCTTTTCA-CATTTAATTGTTTATTTGCT-GCTGAAGTATCTAATACTAGTTT-TTTAGTTCTCATTTGAT-TTTCTA 20968 211 Q R S M A F S H L I V Y L A A E V S N T S L F S S H L D F L 240 20969 TCTTTTTATAAAAATGT-GGACCCAAAGTTTTTGCATT-ACTTTAAATAAATCCAATATATT-TCTAGTAGATTACGATT-TTAATCAGA 21054 241 S F Y K N R G P K V F A S T L N K S N I I S S R L R S L I R 270 21055 TATAAGCT-TATGGTATATATACAAGAGT-TTTCACAAAAAAACAAAATCATATCATTTGTT-TTAACAGAAAAAGGGTCTTATCGTTA- 21140 271 Y K P Y G I Y T R R F H K K T K S Y H L V L T E K G S Y R Y 300 21141 ATTAAAATAAAACGGAA-CGCATTTATTATCGTTTAAGACGATT-AGATTTATTAAAAAACAGGT-AAATCTAAACGTAAAAAACCTTTA 21227 301 I K I K R Q R I Y Y R L R R S R F I K K Q R K S K R K K P L 330 21228 ATTTA-AATAAACGTACTAT-ATTTTTAATAAACGATTTTTTACTTATAA-ATAAAAAATTTAATTAATACAAATATAAT-CTATATTTT 21313 331 I L N K R T Y I F N K R F F T Y Q I K N L I N T N I N L Y F 360 21314 GCTCATACTAAGAT-TATTATAAAATAATTCGTAT-CAATTATGGCTATCATT-AAATGGCTTAAAAAAACTTATAACGT-ATATTATGG 21399 361 A H T K H Y Y K I I R H Q L W L S I K W L K K T Y N R I L W 390 21400 CAAAAAAAACATCGTAGACGACGGGTTAAAGA-AATATATATTTAAGACGCGT-TTGCTTTTTAAATCATT-ATAGATCTTTATAAGTTA 21486 391 Q K K H R R R R V K R N I Y L R R R L L F K S I I D L Y K L 420 21487 TT-ATAATTAGTACCCTCGGATTAAGAAAAACTTTATT-CGCAAACGAAAAGGAAAGGA-CGTTTTATTACATG-GTTCCTTTTAAGAAA 21572 421 I I I S T L G L R K T L S R K R K G K R R F I T M V P F K K 450 21573 GT-GATATAAAAAGTTA-CTTATTTGCAGTTATTTACAAGTCAAACAATCTAATAAAATT 21630 451 R D I K S L L I C S Y L Q V K Q S N K I 470 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57433 Protein: tr|F2Y9V2|F2Y9V2_PHYPO Ribosomal protein S3 OS=Physarum polycephalum GN=rpS3 PE=2 SV=1 @ 0 DNA length: 2868 Protein length: 478 1 Nt shifts: 66 ||| 2 Nt shifts: 0 Score: 1765 Length-adjusted: 3.69 57434 ---------AAAATCCATCT-GATATCTTTCGATTAGGATA-AGTAAAGATGG-CAATATCAATTAAGAGATCCTTTATA-GCCAATGTT 57510 1 M G H K I H P D I F R L G I S K D W Q Y Q L R D P L L A N V 30 57511 TTTATTTATAAGAA-GTGAAAAAAATGTTTTA-AAATATTCAGCACT-TATGTTTCTTATACATA-AGAAGAAATATTAATCT-AGAAAA 57595 31 F I Y K T V K K M F L K Y S A P Y V S Y T I R R N I N P R K 60 57596 TTAGAACTTGAAAAGAT-AAAATTAAACCTATCGA-AATCCTTTTATGCGAGATCT-TTAGTTTTCTCTCATTA-AACATTTCATATGGT 57681 61 L E L E K H K I K P I R N P F M R D S L V F S H L N I S Y G 90 57682 CCATCTCTTTT-TTAGCTATTTT-GTTTTAGATGTTGGAGA-GAAGCTTTACGTGCTAAAAAGAATTA-CGTGAAAAACCATTTTATTAT 57767 91 P S L L L A I F V L D V G A E A L R A K K N L R E K P F Y Y 120 57768 TTAGT-GGTGCTCTTCT-TATGAAATACGTGT-TCATATTATTACTTTGA-AAATATATGTATTTACCTAATCCTGA-AAATATTCTAGA 57852 121 L S G A L S Y E I R R S Y Y Y F R K Y M Y L P N P A K Y S R 150 57853 AAAGA-TATATTTGGAAACGTTA-AAATGGTTCTATTATTTGGGTTTAGATCGCAA-GGTATTAAAGTTAATAA-TTTATTAAAGATTTA 57938 151 K A Y I W K R Y K W F Y Y L G L D R N G I K V N Q F I K D L 180 57939 ATATA-AAAATAAAAGAATCTTGTCT-AAGCTTTTTGTTGAAAATGT-CTTAATATAAAAACTAT-CAGATAGGTAAATATTTATCATGC 58024 181 I I K I K E S C P K L F V E N R L N I K T Y Q I G K Y L S C 210 58025 GA-TCTCTATACAAATACCATCA-GCATGGATTATAAT-AATCTTGCCTTTTTTCCAAAAGCACGTAA-GGTTATCGTTTTTTTAAACAT 58110 211 R S L Y K Y H P A W I I N N L A F F P K A R N G Y R F F K H 240 58111 TTAAAATA-TTAAAATTTTA-TTAAGATTTTTTAAATACTGTCGTTATACTAACTA-AAAAAAAGGTTATTATTTATTAACTTATTATTT 58197 241 L K I L K F L L R F F K Y C R Y T N L K K R L L F I N L L F 270 58198 GTATG-GTCACATCCTATTTATTTTT-TCTTATTTTAATTCAGGTTA-ATAAAAAGAAAAGATAAACTTCAAACGTA-CTTAACAAAATA 58283 271 V C V T S Y L F L S Y F N S G S I K R K D K L Q T V L N K I 300 58284 ATTTATTA-CAAAGTTTACTATTTTTATATTTACA-AGATTTAAATCTATTTATTA-CGCTATAATAAGAAACTATTACAAACTCGATA- 58369 301 I Y L Q S L L F L Y L T R F K S I Y L R Y N K K L L Q T R L 330 58370 ATTTTATATAACTA-TATGCGAAAATTTA-ATATTCACGATGGCTAAAAT-ACTTTTATCCCTAATGATCGTAA-CTGATTGTTCGTTTC 58455 331 I L Y N L Y A K I L I F T M A K T T F I P N D R Q L I V R F 360 58456 TC-GGATTGAATAACGA-AATTATAGTGCACAATTTCTAGTAAATTATATAGT-ATTAAACTTGGTAA-TATTTTAATTTTAATAGTATA 58541 361 L G L N N R N Y S A Q F L V N Y I S I K L G Q Y F N F N S I 390 58542 ATAAAACA-ATAATTCGTTACTATAAACGCGT-AGTGCCATTGA-GGTTTCAGATTTATATT-TCAGGTCGTTTAACCGT-AAAGAACGT 58626 391 I K P I I R Y Y K R R S A I D G F R F I I S G R L T R K E R 420 58627 GCAGCATATAT-GTTAAAGCATATAAAGT-ATGCCTTTAGCTACAGCTAAAATAGA-GTGGATTATGCTTCTGATTC-AAAATTATGCGT 58712 421 A A Y I V K A Y K A M P L A T A K I R V D Y A S D F K I M R 450 58713 TT-GGTGTCGTTGGTATTAAAATTTATTTATTACA-TCTGAAGATGTTCA-TACTATTATTTCTTTGAATT-AAGACTAAAATA 58792 451 F G V V G I K I Y L L T S E D V P Y Y Y F F E F K T K I 478 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 57433 Protein: tr|F2Y9V2|F2Y9V2_PHYPO Ribosomal protein S3 OS=Physarum polycephalum GN=rpS3 PE=2 SV=1 @ 0 DNA length: 2868 Protein length: 478 1 Nt shifts: 66 ||| 2 Nt shifts: 0 Score: 1813 Length-adjusted: 3.79 57434 TATGGGCATAAAATCCATCT-GATATCTTTCGATTAGGATA-AGTAAAGATGG-CAATATCAATTAAGAGATCCTTTATA-GCCAATGTT 57519 1 M G H K I H P D I F R L G I S K D W Q Y Q L R D P L L A N V 30 57520 TTTATTTATAAGAA-GTGAAAAAAATGTTTTA-AAATATTCAGCACT-TATGTTTCTTATACATA-AGAAGAAATATTAATCT-AGAAAA 57604 31 F I Y K T V K K M F L K Y S A P Y V S Y T I R R N I N P R K 60 57605 TTAGAACTTGAAAAGAT-AAAATTAAACCTATCGA-AATCCTTTTATGCGAGATCT-TTAGTTTTCTCTCATTA-AACATTTCATATGGT 57690 61 L E L E K H K I K P I R N P F M R D S L V F S H L N I S Y G 90 57691 CCATCTCTTTT-TTAGCTATTTT-GTTTTAGATGTTGGAGA-GAAGCTTTACGTGCTAAAAAGAATTA-CGTGAAAAACCATTTTATTAT 57776 91 P S L L L A I F V L D V G A E A L R A K K N L R E K P F Y Y 120 57777 TTAGT-GGTGCTCTTCT-TATGAAATACGTGT-TCATATTATTACTTTGA-AAATATATGTATTTACCTAATCCTGA-AAATATTCTAGA 57861 121 L S G A L S Y E I R R S Y Y Y F R K Y M Y L P N P A K Y S R 150 57862 AAAGA-TATATTTGGAAACGTTA-AAATGGTTCTATTATTTGGGTTTAGATCGCAA-GGTATTAAAGTTAATAA-TTTATTAAAGATTTA 57947 151 K A Y I W K R Y K W F Y Y L G L D R N G I K V N Q F I K D L 180 57948 ATATA-AAAATAAAAGAATCTTGTCT-AAGCTTTTTGTTGAAAATGT-CTTAATATAAAAACTAT-CAGATAGGTAAATATTTATCATGC 58033 181 I I K I K E S C P K L F V E N R L N I K T Y Q I G K Y L S C 210 58034 GA-TCTCTATACAAATACCATCA-GCATGGATTATAAT-AATCTTGCCTTTTTTCCAAAAGCACGTAA-GGTTATCGTTTTTTTAAACAT 58119 211 R S L Y K Y H P A W I I N N L A F F P K A R N G Y R F F K H 240 58120 TTAAAATA-TTAAAATTTTA-TTAAGATTTTTTAAATACTGTCGTTATACTAACTA-AAAAAAAGGTTATTATTTATTAACTTATTATTT 58206 241 L K I L K F L L R F F K Y C R Y T N L K K R L L F I N L L F 270 58207 GTATG-GTCACATCCTATTTATTTTT-TCTTATTTTAATTCAGGTTA-ATAAAAAGAAAAGATAAACTTCAAACGTA-CTTAACAAAATA 58292 271 V C V T S Y L F L S Y F N S G S I K R K D K L Q T V L N K I 300 58293 ATTTATTA-CAAAGTTTACTATTTTTATATTTACA-AGATTTAAATCTATTTATTA-CGCTATAATAAGAAACTATTACAAACTCGATA- 58378 301 I Y L Q S L L F L Y L T R F K S I Y L R Y N K K L L Q T R L 330 58379 ATTTTATATAACTA-TATGCGAAAATTTA-ATATTCACGATGGCTAAAAT-ACTTTTATCCCTAATGATCGTAA-CTGATTGTTCGTTTC 58464 331 I L Y N L Y A K I L I F T M A K T T F I P N D R Q L I V R F 360 58465 TC-GGATTGAATAACGA-AATTATAGTGCACAATTTCTAGTAAATTATATAGT-ATTAAACTTGGTAA-TATTTTAATTTTAATAGTATA 58550 361 L G L N N R N Y S A Q F L V N Y I S I K L G Q Y F N F N S I 390 58551 ATAAAACA-ATAATTCGTTACTATAAACGCGT-AGTGCCATTGA-GGTTTCAGATTTATATT-TCAGGTCGTTTAACCGT-AAAGAACGT 58635 391 I K P I I R Y Y K R R S A I D G F R F I I S G R L T R K E R 420 58636 GCAGCATATAT-GTTAAAGCATATAAAGT-ATGCCTTTAGCTACAGCTAAAATAGA-GTGGATTATGCTTCTGATTC-AAAATTATGCGT 58721 421 A A Y I V K A Y K A M P L A T A K I R V D Y A S D F K I M R 450 58722 TT-GGTGTCGTTGGTATTAAAATTTATTTATTACA-TCTGAAGATGTTCA-TACTATTATTTCTTTGAATT-AAGACTAAAATA 58801 451 F G V V G I K I Y L L T S E D V P Y Y Y F F E F K T K I 478 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43442 Protein: tr|F2Y9V3|F2Y9V3_PHYPO Ribosomal protein S4 OS=Physarum polycephalum GN=rpS4 PE=2 SV=1 @ 0 DNA length: 1638 Protein length: 273 1 Nt shifts: 31 ||| 2 Nt shifts: 0 Score: 1125 Length-adjusted: 4.12 43443 ------ACATATATTCAAAATAT-AATAAAAATAGTTT-ACTTTACGATTTAAAAAGTATAAACGCTC-CGACGTGATGTATGGGGACGC 43523 1 M I T Y I Q N T N K N S F T L R F K K Y K R L R R D V W G R 30 43524 CTGCT-TTAAGAAATAAAAAAAATTACGTTACAGT-GTAATTAGAACTTATGCACAGGT-GAATTAATGAAGGC-ATACGTAATTTAACT 43609 31 L A L R N K K N Y V T A V I R T Y A Q R E L M K R I R N L T 60 43610 AGAAGACGAAAAAGACGTATAGA-AGAAAATTTAAAATTAGAAGAAAAGTAGT-CAATTCCAATATGCATT-CAAGAAAAACCTAAAGTT 43696 61 R R R K R R I R R K F K I R R K V A Q F Q Y A I Q E K P K V 90 43697 CGTTTGGT-AAACCTTATGAATTTCGTGTTGATTTCGT-TTTTTAGCTAAATG-TTACGTTTTTTTTATAATTG-CGTAAAACAAAATA- 43781 91 R L G K P Y E F R V D F R F L A K S L R F F Y N L R K T K S 120 43782 TCTTTAAGAAAATTATTCACTCCTATTCATAAACT-ATCTTTAGAAAGAAAATCCT-TTTTTTCTAGAACATCGTGCTGATGTTTA-TTT 43868 121 S L R K L F T P I H K P I F R K K I P F F L E H R A D V L F 150 43869 TTCCGTGCAAATTTTGTTGATAA-ATTAATCAAGCTCGTTA-TTTCTAAAAACAAAACAATA-AGTTATTTAGTACCTAAGAT-AGGAAA 43954 151 F R A N F V D N I N Q A R L F L K T K Q L S Y L V P K H R K 180 43955 AAAAATTCTTT-GTTACTCAAAAAATAATCTTAAAACA-TATACCCAAATCCT-ATTTTTACATTTTTTAAACTAGT-CCTTTATTAGCT 44040 181 K N S F V T Q K I I L K P Y T Q I P I F T F F K L S P L L A 210 44041 TC-AAACGTAAAAAAACATTGTATCATGA-CTTCGTTCCCGTAATAAATC-ATTGCTAATGCACCTAAATGGCTTAT-GTTAATTATAAA 44126 211 F K R K K T L Y H A L R S R N K L I A N A P K W L Y V N Y K 240 44127 TTGATGATAGA-CTTTTTATAAGAAATGCACGTGATATCAAATATTATTTTCCTTATTCTAAAAAAATAACAAGCTTTTTAGGAGCTGCT 44215 241 L M I A L F I R N A R D I K Y Y F P Y S K K I T S F L G A A 270 44216 AAGTATTTT 44224 271 K Y F 273 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Backward 43442 Protein: tr|F2Y9V3|F2Y9V3_PHYPO Ribosomal protein S4 OS=Physarum polycephalum GN=rpS4 PE=2 SV=1 @ 0 DNA length: 1638 Protein length: 273 1 Nt shifts: 31 ||| 2 Nt shifts: 0 Score: 1139 Length-adjusted: 4.17 43443 AATGATACATATATTCAAAATAT-AATAAAAATAGTTT-ACTTTACGATTTAAAAAGTATAAACGCTC-CGACGTGATGTATGGGGACGC 43529 1 M I T Y I Q N T N K N S F T L R F K K Y K R L R R D V W G R 30 43530 CTGCT-TTAAGAAATAAAAAAAATTACGTTACAGT-GTAATTAGAACTTATGCACAGGT-GAATTAATGAAGGC-ATACGTAATTTAACT 43615 31 L A L R N K K N Y V T A V I R T Y A Q R E L M K R I R N L T 60 43616 AGAAGACGAAAAAGACGTATAGA-AGAAAATTTAAAATTAGAAGAAAAGTAGT-CAATTCCAATATGCATT-CAAGAAAAACCTAAAGTT 43702 61 R R R K R R I R R K F K I R R K V A Q F Q Y A I Q E K P K V 90 43703 CGTTTGGT-AAACCTTATGAATTTCGTGTTGATTTCGT-TTTTTAGCTAAATG-TTACGTTTTTTTTATAATTG-CGTAAAACAAAATA- 43787 91 R L G K P Y E F R V D F R F L A K S L R F F Y N L R K T K S 120 43788 TCTTTAAGAAAATTATTCACTCCTATTCATAAACT-ATCTTTAGAAAGAAAATCCT-TTTTTTCTAGAACATCGTGCTGATGTTTA-TTT 43874 121 S L R K L F T P I H K P I F R K K I P F F L E H R A D V L F 150 43875 TTCCGTGCAAATTTTGTTGATAA-ATTAATCAAGCTCGTTA-TTTCTAAAAACAAAACAATA-AGTTATTTAGTACCTAAGAT-AGGAAA 43960 151 F R A N F V D N I N Q A R L F L K T K Q L S Y L V P K H R K 180 43961 AAAAATTCTTT-GTTACTCAAAAAATAATCTTAAAACA-TATACCCAAATCCT-ATTTTTACATTTTTTAAACTAGT-CCTTTATTAGCT 44046 181 K N S F V T Q K I I L K P Y T Q I P I F T F F K L S P L L A 210 44047 TC-AAACGTAAAAAAACATTGTATCATGA-CTTCGTTCCCGTAATAAATC-ATTGCTAATGCACCTAAATGGCTTAT-GTTAATTATAAA 44132 211 F K R K K T L Y H A L R S R N K L I A N A P K W L Y V N Y K 240 44133 TTGATGATAGA-CTTTTTATAAGAAATGCACGTGATATCAAATATTATTTTCCTTATTCTAAAAAAATAACAAGCTTTTTAGGAGCTGCT 44221 241 L M I A L F I R N A R D I K Y Y F P Y S K K I T S F L G A A 270 44222 AAGTATTTT 44230 271 K Y F 273 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 22245 Protein: tr|F2Y9V4|F2Y9V4_PHYPO Ribosomal protein S7 OS=Physarum polycephalum GN=rpS7 PE=2 SV=1 @ 0 DNA length: 1578 Protein length: 263 1 Nt shifts: 28 ||| 2 Nt shifts: 0 Score: 1120 Length-adjusted: 4.26 22246 ATGACTGA-TTAAATCAATATTTTATTTCATA-GAAAACAAGAAATTTTTAACTTCCTTTATTAA-ATATTACAAAAACGGGT-AATAAA 22331 1 M T A L N Q Y F I S S E N K K F L T S F I N I L Q K R G N K 30 22332 CAACGAGCTTA-TCATCTTTCTTTGGCTT-TTTAAACAATTAAAACTTGGTATAGA-GGTTTTCCTAT-GTTGATAAATATCCTTTACAT 22417 31 Q R A L S S F F G L F K Q L K L G I A G F P I V D K Y P L H 60 22418 ACTGT-GATGTAAAAAACCCCATAGATGCTTA-TATCAAAGTTG-TATAATTTAAAACCTGT-TTTCTTATACGTAGAACTATAAG-TCA 22502 61 T R D V K N P I D A L Y Q S L Y N L K P A F L I R R T I K S 90 22503 GGACGTCGTTATGATTTACCTGTACCGATAGT-GAAAACCGTGCTATTTTTATGGCAATTGATTGGTTACGTAAAACTGTTTTTAAAAAT 22591 91 G R R Y D L P V P I S E N R A I F M A I D W L R K T V F K N 120 22592 AATAAGAATGATCTTTCTTT-ACTTCACTCTTAGCACGTGAAATAGT-GCTTCTTTACATAT-GAGGGATA-GCTAAAGATTTCCTACGA 22677 121 N K N D L S F T S L L A R E I S A S L H H E G S A K D F L R 150 22678 GT-TATATTGATAT-GCTATAGATCAAGA-CCTTTTAGTAGATTTATAAG-AAAAAACGGTTTAATGTTTCAAG-TCAAAAAGAACTATT 22762 151 A Y I D I A I D Q R P F S R F I K K K R F N V S K S K R T I 180 22763 AT-GCCTCACGCTTTGAGAAAATACGTGAATCTGTACGTGT-ACCTTAAGATCTCGTAAATATAT-AACATAGGTATAACACGCAGAGTA 22849 181 I A S R F E K I R E S V R R T L R S R K Y H N I G I T R R V 210 22850 AATAAGAT-AATATCCGAACTACTAATACTTTTTCAAAAAAAAAAAGATATAAAAAATCTTTTAAAAAAGTAAGAAAAAATAATAATATA 22938 211 N K H N I R T T N T F S K K K R Y K K S F K K V R K N N N I 240 22939 AAAAGTAATAAAAAATTTAAAAAATCTAAACGTCATACTCGTATATC-AAAAAAAATAAAAATAAAAAA 23006 241 K S N K K F K K S K R H T R I I K K N K N K K 263 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 40086 Protein: tr|F2Y9V5|F2Y9V5_PHYPO Ribosomal protein S8 OS=Physarum polycephalum GN=rpS8 PE=2 SV=1 @ 0 DNA length: 876 Protein length: 146 1 Nt shifts: 18 ||| 2 Nt shifts: 0 Score: 548 Length-adjusted: 3.75 40087 AATGACAGCCGTTTTTCTGCTATGATAGT-ATCATGAATGCCACTATAAG-ACTGGTAATTCTTTCTGTGAAATACCAGT-AATAATTTA 40173 1 M T A R F S A M I S I M N A T I K T G N S F C E I P A N N L 30 40174 TGTATAAT-ACTTTACGTCTTTTACGAAATAA-GGATATATTTGGGGATTTAGTTATGTTCT-CCACAATTACGAGCGAAACGTTA-TAT 40259 31 C I N T L R L L R N Q G Y I W G F S Y V S P Q L R A K R L Y 60 40260 CCGAGAGTTAAAATTTC-TTTAAATATAT-GATAGCAATACTCA-GTAATAAAATCATT-AATATTTTTAAAAGAACCGT-TCTAATTTC 40344 61 P R V K I F F K Y I D S N T P V I K S I N I F K R T R S N F 90 40345 CGTATTATCGA-AATAATAAACTTTATCAAATCTTGCA-CAAAATAAATTATATATTTG-TCAACAACTAAAGGACTTATTATAACCTCT 40431 91 R I I R N N K L Y Q I L A Q N K L Y I L S T T K G L I I T S 120 40432 TA-GACAATTTATATAATGATCTAATAAAATCCAA-AAAAATAGGTTATCTGGCAAACTATA-GCTGAAATTTTTATA 40506 121 L D N L Y N D L I K S Q K N R L S G K L L A E I F I 146 DNA: gi|11466223|ref|NC_002508.1| Physarum polycephalum mitochondrion, complete genome @ Forward 23773 Protein: tr|F2Y9V0|F2Y9V0_PHYPO Ribosomal protein S19 OS=Physarum polycephalum GN=rpS19 PE=2 SV=1 @ 0 DNA length: 756 Protein length: 126 1 Nt shifts: 15 ||| 2 Nt shifts: 0 Score: 486 Length-adjusted: 3.86 23774 ATGAAAGTACCTTT-GTTAATTATGAGTTATTAACAAAGTA-ATTAAAGAATCTTCTATAAA-GCTCTTGATGAAAATATTAAAGA-GAA 23859 1 M K V P F V N Y E L L T K V I K E S S I Q A L D E N I K D E 30 23860 CATAAACCAGTAATAAA-ACAAAAAGTCGATCTAGTACTATATA-AACCCTTTTGTTGGAAAGTA-ATAGT-GTTTATACTGGTGCTAGA 23945 31 H K P V I Q T K S R S S T I I N P F V G K V I A V Y T G A R 60 23946 TT-AAAAGAATATATGTACT-TCTAGAATGGTAGGTTTTAAACTTGGTGC-TTTGCTTTTACAAAGAAATTAGGTAAGTCTAC-AT-AAT 24030 61 S K R I Y V T S R M V G F K L G C F A F T K K L G K S I H N 90 24031 AGTGAACATAATGT-AAAAAAATAGCGAAAATGAAGCGAAAAATACT-CAGAAAAAAGTACGTAAAACAGTTGTCAAAACAGTTAAAAAA 24118 91 S E H N R K K I A K M K R K I T Q K K V R K T V V K T V K K 120 24119 CCTACTAAAAAGAAAAAA 24136 121 P T K K K K 126