flowEMMi: An automated model-based clustering tool for microbial cytometric data
Joachim Ludwig, Christian Höner zu Siederdissen, Zishu Liu, Peter F Stadler, and Susann Müller
2019-July-15 Re-Organized
Call using ./em.R which is an Rscript. ./em.R --help will provide help.
NixOS, and NixOS command line support. Run via: nix-shell (in the directory).
fcs files for testing: these are all available from flowrepository.org; using the identifiers given in the paper.
wsp files for testing: here
New version of flowEMMi with command-line processing
This version can be used directly from the command line, as detailed in the
README.md file. It should allow for automated processing of a large number of
files in batch scripts.
This new version has NixOS support files for easy installation.