Encoding.....Done
Pairwise alignments.....
Alignment: 1   Sequ. (1 : 2)   Score: 20186
Alignment: 2   Sequ. (1 : 3)   Score: 27598
Alignment: 3   Sequ. (1 : 4)   Score: 19338
Alignment: 4   Sequ. (1 : 5)   Score: 20157
Alignment: 5   Sequ. (1 : 6)   Score: 19322
Alignment: 6   Sequ. (1 : 7)   Score: 27587
Alignment: 7   Sequ. (1 : 8)   Score: 30086
Alignment: 8   Sequ. (2 : 3)   Score: 20139
Alignment: 9   Sequ. (2 : 4)   Score: 23982
Alignment: 10   Sequ. (2 : 5)   Score: 30257
Alignment: 11   Sequ. (2 : 6)   Score: 23966
Alignment: 12   Sequ. (2 : 7)   Score: 20116
Alignment: 13   Sequ. (2 : 8)   Score: 20138
Alignment: 14   Sequ. (3 : 4)   Score: 19599
Alignment: 15   Sequ. (3 : 5)   Score: 20178
Alignment: 16   Sequ. (3 : 6)   Score: 19711
Alignment: 17   Sequ. (3 : 7)   Score: 31652
Alignment: 18   Sequ. (3 : 8)   Score: 27768
Alignment: 19   Sequ. (4 : 5)   Score: 24061
Alignment: 20   Sequ. (4 : 6)   Score: 28283
Alignment: 21   Sequ. (4 : 7)   Score: 19580
Alignment: 22   Sequ. (4 : 8)   Score: 19372
Alignment: 23   Sequ. (5 : 6)   Score: 24021
Alignment: 24   Sequ. (5 : 7)   Score: 20167
Alignment: 25   Sequ. (5 : 8)   Score: 20189
Alignment: 26   Sequ. (6 : 7)   Score: 19744
Alignment: 27   Sequ. (6 : 8)   Score: 19536
Alignment: 28   Sequ. (7 : 8)   Score: 27829
Profile alignments.....
Alignment: 29   Cluster: 8   Score: 31652
Alignment: 30   Cluster: 9   Score: 30257
Alignment: 31   Cluster: 10   Score: 30086
Alignment: 32   Cluster: 11   Score: 27706
Alignment: 33   Cluster: 12   Score: 24036
Alignment: 34   Cluster: 13   Score: 25306
Alignment: 35   Cluster: 14   Score: 19856
See 'cluster.txt' and 'info.ral' for information about profiles.
