A taxonomic classification of all 147 fungal organisms that were used in our publication can be found here: Taxonomic Tree

Kingdom	Phylum	Subphylum	Class	Precursor Fasta	Precursor Alignment	Precursor gene structure
Fungi	Microsporidia			fasta	aln \|stk	ps \|png
Fungi incertae sedis	Mucoromycotina		fasta	aln \|stk	ps \|png
Chytridiomycota			fasta	aln \|stk	ps \|png
Blastocladiomycota			fasta	aln \|stk	ps \|png
Basidiomycota			fasta	aln \|stk	ps \|png
Ascomycota	Taphrinomycotina		fasta	aln \|stk	ps \|png
Saccharomycotina		fasta	aln \|stk	ps \|png
Pezizomycotina	Dothideomycetes	fasta	aln \|stk	ps \|png
Eurotiomycetes	fasta	aln \|stk	ps \|png
Leotiomycetes	fasta	aln \|stk	ps \|png
Sordariomycetes	fasta	aln \|stk	ps \|png

Fusarium graminearum

The Fusarium graminearum Genome Database and published RNA-seq tracks can be found here . Reference: Wong et al.

Overlap of U6.1 gene with RNA-seq reads showing the excision of all three canonical GT-AG introns: fgr.U6.1.png
Overlap of the intronless U6.2 gene with RNA-seq reads: fgr.U6.2.png
Schizosaccharomyce pombe

The Schizosaccharomyces pombe Genome Browser and the RNA-seq tracks published by Marguerat et al. can be found here .

Overlap of different RNA-seq experiments with the annotated spo.U6.1 gene: spo.U6.1.png
Trichoderme reesei

The mapped short read archive published by Ries et al. can be accessed here.

Overlap of mapped reads of sample GSM1088351 with the identified tre.U6.1 gene: tre.U6.1.png