# STOCKHOLM 1.0 BACTERIAL Tyr #=GC CS .445355..5242...........2425.63424.......42436.................4652.........2564553544..... #=GC BP +++++++..+++d...........d+++.+++++.......+++++.................+++++.......++++++++++++.... tdbD11780|Acinetobacter_sp._ADP1|62977|Tyr|GTA GGTGAGATTCCCGAGC--GGTCAAAGGGGGCGGACTGTAACTCCGCTACG--AAAG--TTT-CGAAGGTTCGAATCCTTCTCTCACCACCA tdbD11620|Agrobacterium_tumefaciens_str._C58|176299|Tyr|GTA GGAGGGATGCCCGAGT--GGTTAAAGGGGACGGACTGTAAATCCGTTGGC--TACG--CCTACGTTGGTTCAAATCCAACTCCCTCCACCA tdbD11600|Aquifex_aeolicus_VF5|224324|Tyr|GTA GGAGGGGTGGCCGAGC--GGCCAAAGGCAGGGGACTGTAAATCCCCCGGGCGTCCGCCCTG-CGCAGGTTCGAATCCTGCCCCCTCCA--- tdbD11781|Bacillus_anthracis_str._A2012|191218|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11748|Bacillus_anthracis_str._Ames|198094|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11759|Bacillus_anthracis_str._Sterne|260799|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11772|Bacillus_cereus_ATCC_10987|222523|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11736|Bacillus_cereus_ATCC_14579|226900|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11723|Bacillus_halodurans_C-125|272558|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCC--TCAG--GGTTCGGCGGTTCGAATCCGTCCCCCTCCACCA tdbD11565|Bacillus_subtilis_subsp._subtilis_str._168|224308|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCC--TCAG--GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11782|Bacillus_thuringiensis_serovar_konkukian_str._97-27|281309|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11745|Bacteroides_thetaiotaomicron_VPI-5482|226186|Tyr|GTA GGGCAAATACCAGAGT--GGCCAAATGGGGCAGACTGTAAATCTGCTGTCT-TTC--GACTTCGGTGGTTCGAATCCATCTTTGCCCA--- tdbD11749|Bartonella_henselae_str._Houston-1|283166|Tyr|GTA GGAGGGGTGCCCGAGT--GGTTAAAGGGGGCGGACTGTAAATCCGTTGCG--TATG--CTA-CGTTGGTTCGAATCCAACCCCCTCCACCA tdbD11784|Bartonella_quintana_str._Toulouse|283165|Tyr|GTA GGAGGGGTGCCCGAGT--GGTTAAAGGGGGCGGACTGTAAATCCGTTGCG--TATG--CTA-CGTTGGTTCGAATCCAACCCCCTCCACCA tdbD11750|Bdellovibrio_bacteriovorus_HD100|264462|Tyr|GTA GGGTAGGTGCCCGAGT--GGCTAAAGGGGACGGACTGTAAATCCGTTGGCT-TAT--GTCTACGAAGGTTCGAATCCTTCCCTGCCCACCA tdbD11710|Bifidobacterium_longum_NCC2705|206672|Tyr|GTA GGCGGATTTCCCAAGC--GGTCAAAGGGAGCTGACTGTAAATCAGCCGCT--TCGT--GCTTCAGTGGTTCGAATCCACTATCCGCCA--- tdbD11585|Borrelia_burgdorferi_B31|224326|Tyr|GTA GGGGCGGTACCGAAGT--GGTTAACCGGGGCAGACTGTAAATCTGTTGGC--TTTG--CCTACGTGGGTTCGAATCCCACCCTCCCCA--- tdbD11724|Bradyrhizobium_japonicum_USDA_110|224911|Tyr|GTA GGGGGAGTGTCCCGAGT-GGCA-AAGGGAGCTGACTGTAAATCAGCCGCCT-CAT--GGCTTCGCAGGTTCGAGTCCTGCCTCCCCCACCA tdbD11611|Brucella_melitensis_16M|224914|Tyr|GTA GGAGGGATGCCCGAGT--GGTTAAAGGGGACGGACTGTAAATCCGTTGGC--TATG--CCTACGTTGGTTCAAATCCAACTCCCTCCACCA tdbD11711|Brucella_suis_1330|204722|Tyr|GTA GGAGGGATGCCCGAGT--GGTTAAAGGGGACGGACTGTAAATCCGTTGGC--TATG--CCTACGTTGGTTCAAATCCAACTCCCTCCACCA tdbD11566|Buchnera_aphidicola_str._APS_(Acyrthosiphon_pisum)|107806|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATAG--ACTTCGAAGGTTCGAATCCTTCTCCCACCACCA tdbD11737|Buchnera_aphidicola_str._Bp_(Baizongia_pistaciae)|224915|Tyr|GTA GGTGGGATTCCCGAGT--GGCTAAAGGGAGCAGACTGTAAATCTGCCGTC--AAAG--ACTTCGAAGGTTCGAATCCTTCTCCCACCA--- tdbD11694|Buchnera_aphidicola_str._Sg_(Schizaphis_graminum)|198804|Tyr|GTA GGTGGGATTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTCT-AAG--ACTT-CGAAGGTTCGAATCCTTCTCCCACCA--- tdbD11586|Campylobacter_jejuni_subsp._jejuni_NCTC_11168|192222|Tyr|GTA GGTGAGTTACTCAAGT--GGCCAACGAGGGCAGACTGTAAATCTGCTGGCT-TTC--GCCTTCCGTGGTTCGAATCCACGACTCACCACCA tdbD11785|Candidatus_Blochmannia_floridanus|203907|Tyr|GTA GATGGGGTGCCCGAGT--GGTTAAAGGGAGCAGACTGTAAATCTGCCGTC--GTAG--ACTTCGAAGGTTCAAATCCTTCCCCCATCA--- tdbD11754|Candidatus_Protochlamydia_amoebophila_UWE25|264201|Tyr|GTA GGGGGTGTCGCATAGT--GGCA-ATTGCAAGGGACTGTAAATCCCTCGACT-TCG--GTCTCCGTTGGTTCGAGTCCAACCGCCCCCA--- tdbD11587|Caulobacter_crescentus_CB15|190650|Tyr|GTA -GGGAATGTCCCGAGT--GGCA-AAGGGGGGGGACTGTAAATCCCCTGGCG-TAAG-CCTT-CGTAGGTTCGAGTCCTACTTCCCCCACCA tdbD11604|Chlamydia_muridarum_Nigg|243161|Tyr|GTA GGGGGTGTCGCATAGC--GGTCAATTGCATCGGACTGTAAATCCGACTCCT-TAC--GGATACGTTGGTTCAAATCCAGCCACCCCCA--- tdbD11562|Chlamydia_trachomatis_D/UW-3/CX|272561|Tyr|GTA GGGGGTGTCGCATAGC--GGTCAATTGCATCGGACTGTAAATCCGACTCCT-TAC--GGATACGTTGGTTCAAATCCAGCCACCCCCA--- tdbD11560|Chlamydophila_pneumoniae_AR39|115711|Tyr|GTA GGGGGTGTCGCATAGT--GGTCAATTGCATCGGACTGTAAATCCGGCTCCT-TAC--GGATACGTTGGTTCAAATCCAGCCACCCCCA--- tdbD11561|Chlamydophila_pneumoniae_CWL029|115713|Tyr|GTA GGGGGTGTCGCATAGT--GGTCAATTGCATCGGACTGTAAATCCGGCTCCT-TAC--GGATACGTTGGTTCAAATCCAGCCACCCCCA--- tdbD11575|Chlamydophila_pneumoniae_J138|138677|Tyr|GTA GGGGGTGTCGCATAGT--GGTCAATTGCATCGGACTGTAAATCCGGCTCCT-TAC--GGATACGTTGGTTCAAATCCAGCCACCCCCA--- tdbD11691|Chlorobium_tepidum_TLS|194439|Tyr|GTA GGGTAGGTAGCGAAGC--GGTCAAACGCAACAGACTGTAAATCTGTCGACA-TATG-TCTT-CGGAGGTTCGAATCCTCCCCTACCCA--- tdbD11609|Clostridium_acetobutylicum_ATCC_824|272562|Tyr|GTA GGAGGAATTCCCGAGT--GGCTAAAGGGGGCAGACTGTAAATCTGTTAGC--TCAG--CTTTCCATGGTTCGAATCCATGTTCCTCCACCA tdbD11603|Clostridium_perfringens_str._13|195102|Tyr|GTA GGTGGAATTCCCGAGT--GGCCAAAGGGGGCAGACTGTAAATCTGTTGTCG-GAC--GACTTCGAAGGTTCGAATCCTTCTTCCACCACCA tdbD11725|Clostridium_tetani_E88|212717|Tyr|GTA GGAGGAGTTCCCGAGT--GGCCAAAGGGGGCAGACTGTAAATCTGTTGGCT-TTC--GCCTTCGATGGTTCGAATCCGTCCTCCTCCACCA tdbD11751|Corynebacterium_diphtheriae_NCTC_13129|257309|Tyr|GTA GCCAGGTTGCCCGAGC--GGCCAAAGGGAGCGGACTGTAAATCCGTCGGC--ATTG--CCTACAGAAGTTCGAATCTTCTACCTGGCA--- tdbD11712|Corynebacterium_efficiens_YS-314|196164|Tyr|GTA GCCAGATTGCCCGAGC--GGCCAATGGGAGCGGACTGTAAATCCGTCGGCT-TGC--GCCTACGTAGGTTCGAATCCTACATCTGGCA--- tdbD11696|Corynebacterium_glutamicum_ATCC_13032|196627|Tyr|GTA GCCAGATTGCCCGAGC--GGCCAATGGGAGCGGACTGTAAATCCGTCGGCT-TGC--GCCTACGTAGGTTCGAATCCTACATCTGGCA--- tdbD11735|Coxiella_burnetii_RSA_493|227377|Tyr|GTA GGAGGGGTTCCCGAGT--GGCCAAAGGGATCAGACTGTAAATCTGACGGC--TCAG--CCTTCGTAGGTTCGAATCCTACCCCCTCCA--- tdbD11589|Deinococcus_radiodurans_R1|243230|Tyr|GTA GGGTAGGTGGCCGAGT--GGTTAAAGGCGACAGACTGTAAATCTGTTCACG-TAAG-TGTA-CGGCGGTTCGAATCCGCCCCTGCCCACCA tdbD11773|Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough|882|Tyr|GTA GGTGGGGTTCCCGAGT--GGCCAAAGGGAACAGACTGTAAATCTGTCGTCG-TAA--GACTTCGGTGGTTCAAATCCACCCCCCACCACCA tdbD11726|Enterococcus_faecalis_V583|226185|Tyr|GTA GGAGGAATAGCGAAGT--GGCTAAACGCGACGGACTGTAAATCCGTTCCT--TAG---GGTTCAGTGGTTCGAATCCACTTTCCTCCA--- tdbD11740|Escherichia_coli_CFT073|199310|Tyr|GTA GCTGATATAGCTCAGTT-GGT--AGAGCGCACCCTTGGTAAGGGTGAG------------GTCGGCAGTTCGAATCTGCCTATCAGCACCA tdbD11576|Escherichia_coli_K12|83333|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11578|Escherichia_coli_O157:H7|83334|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11580|Escherichia_coli_O157:H7_EDL933|155864|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11692|Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586|190304|Tyr|GTA GGTTGGGTTCCCGAGC--GGTCAAAGGGATCAGACTGTAAATCTGACGGC--TCAG--CCTTCGAAGGTTCGAATCCTTCCCCAACCACCA tdbD11760|Geobacter_sulfurreducens_PCA|243231|Tyr|GTA GGAGGGATTCCCGAGC--GGCCAAAGGGAACAGACTGTAAATCTGTCGTCG-AAC--GACTTCGGAGGTTCGAATCCTCCTCCCTCCACCA tdbD11584|Haemophilus_influenzae_Rd_KW20|71421|Tyr|GTA GGAGGGGTTCCCGAGC--GGCCAAAGGGGGCAGACTGTAAATCTGTTGGC--TCAG--CCTTCGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11582|Helicobacter_pylori_26695|85962|Tyr|GTA GGGTAGGTACTCAAGT--GGCCAACGAGGGCAGACTGTAAATCTGCTGACT-ATG--TCTT-CGAAGGTTCGAATCCTTCCCTGCCCACC- tdbD11583|Helicobacter_pylori_J99|85963|Tyr|GTA GGTGAGATACTCAAGT--GGCCAACGAGGGCAGACTGTAAATCTGCTGACT-ATG--TCTT-CCGTGGTTCGAATCCACGTCTCACCACCA tdbD11762|Lactobacillus_johnsonii_NCC_533|257314|Tyr|GTA GGAGGCCTAGCGAAGT--GGCTAAACGCGGCGGTCTGTAAAACCGCTCTCT-CTG--AGTT-CGGTGGTTCGAATCCACTGGCCTCCA--- tdbD11727|Lactobacillus_plantarum_WCFS1|220668|Tyr|GTA GGAGGGGTAGCGAAGTCTGGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGTGGTTCGAATCCACTCCCCTCCA--- tdbD11763|Leifsonia_xyli_subsp._xyli_str._CTCB07|281090|Tyr|GTA GGCGAGTTACCCAAGC--GGCCAAAGGGATCTGACTGTAAATCAGCTGTCT-ACG--ACTT-CGGGGGTTCGAATCCCTCACTCGCCA--- tdbD11713|Leptospira_interrogans_serovar_Lai_str._56601|189518|Tyr|GTA GGGTAGGTACTCAAGT--GGCCAACGAGGGCAGACTGTAAATCTGCTGACT-ATG--TCTT-CGAAGGTTCGAATCCTTCCCTGCCCACCA tdbD11601|Listeria_innocua_Clip11262|272626|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGTGGTTCGAATCCACTCCCCTCCACCA tdbD11602|Listeria_monocytogenes_EGD-e|169963|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGTGGTTCGAATCCACTCCCCTCCACCA tdbD11774|Listeria_monocytogenes_str._4b_F2365|265669|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGTGGTTCGAATCCACTCCCCTCCACCA tdbD11775|Mesoplasma_florum_L1|265311|Tyr|GTA GGAGGGGTAGCGAAGC--GGTCAAACGCGGGTGGCTGTAACCCACTTCCT--TTC---GGTTCGGGGGTTCGAATCCCTCCCCCTCCACCA tdbD11612|Mesorhizobium_loti_MAFF303099|266835|Tyr|GTA GGAGAGGTGCCCGAGT--GGTTAAAGGGGACGGACTGTAAATCCGTTGGC--TTAG--CCTACGTTGGTTCGAATCCAACCCTCTCCACCA tdbD11733|Mycobacterium_bovis_AF2122/97|233413|Tyr|GTA GGCAGGTTGCCCGAGC--GGCCAATGGGAGCGGACTGTAAATCCGTCGCG--AAAG--CTA-CGCAGGTTCGAATCCTGCACCTGCCACCA tdbD11573|Mycobacterium_leprae_TN|272631|Tyr|GTA GGCAGGTTGCCCGAGC--GGCCAATGGGAGCGGACTGTAAATCCGTCGCG--AAAG--CTA-CACAGGTTCGAATCCTGTACCTGCCACCA tdbD11567|Mycobacterium_tuberculosis_CDC1551|83331|Tyr|GTA GGCAGGTTGCCCGAGC--GGCCAATGGGAGCGGACTGTAAATCCGTCGCG--AAAG--CTA-CGCAGGTTCGAATCCTGCACCTGCCACCA tdbD11753|Mycobacterium_tuberculosis_H37Rv|83332|Tyr|GTA GGCAGGTTGCCCGAGC--GGCCAATGGGAGCGGACTGTAAATCCGTCGCG--AAAG--CTA-CGCAGGTTCGAATCCTGCACCTGCCACCA tdbD3514|Mycoplasma_capricolum|2095|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGGTGGCTGTAACCCACTTCCT--TAC---GGTTCGGGGGTTCGAATCCCTCCCCCTCCACCA tdbD11732|Mycoplasma_gallisepticum_R|233150|Tyr|GTA GGGTAGGTAGCGAAGT--GGCTAAACGCTTCTGACTGTAAATCAGACACCT-TTT--GGTTTCGGCGGTTCGAATCCGTCCCTGCCCACCA tdbD11590|Mycoplasma_genitalium_G37|243273|Tyr|GTA GGACAGGTAGCGAAGT--GGCTAAACGCTTCTGACTGTAGATCAGACACCT-TTAT-GGTTTCGGGAGTTCGAATCTCTCCCTGTCCACCA tdbD11591|Mycoplasma_pneumoniae_M129|272634|Tyr|GTA GGACAGGTAGCGAAGT--GGCTAAACGCTTCTGACTGTAGATCAGACACCT-TCAT-GGTTTCGGGAGTTCGAATCTCTCCCTGTCCACCA tdbD11619|Mycoplasma_pulmonis_UAB_CTIP|272635|Tyr|GTA GGGGGGGTAGCGAAGC--GGCCAAACGCGGGTGGCTGTAACCCACTTTCT--TCG---GATTCGGGGGTTCGAATCCCTCCCCCCCCACCA tdbD11568|Neisseria_meningitidis_MC58|122586|Tyr|GTA GGAGGGATTCCCGAGC--GGTCAAAGGGGGCAGACTGTAAATCTGTTGCG--AAAG--CTT-CGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11569|Neisseria_meningitidis_Z2491|122587|Tyr|GTA GGAGGGGTTCCCGAGC--GGTCAAAGGGGGCAGACTGTAAATCTGTTGCG--AAAG--CTT-CGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11744|Nitrosomonas_europaea_ATCC_19718|228410|Tyr|GTA GGAGGGGTTCCCGAGC--GGTCAAAGGGATCAGACTGTAAATCTGACGGC--TCTG--CCTTCGAAGGTTCGAATCCTTCCCCCTCCACCA tdbD11618|Nostoc_sp._PCC_7120|103690|Tyr|GTA GGGTCGGTGTCCGAGT--GGTTAATGGAGACGGACTGTAAATCCGTTGGTT-TAC--ACCTACGCTGGTTCAAATCCAGCCCGGCCCA--- tdbD11715|Oceanobacillus_iheyensis_HTE831|221109|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD11752|Onion_yellows_phytoplasma_OY-M|262768|Tyr|GTA GGAGGGATAGCGAAGT--GGCTAAACGCAGCAGTCTGTAAAACTGTTCCG--TAA---GGTACGGTGGTTCGAATCCACCTCCCTTCACCA tdbD11592|Pasteurella_multocida_subsp._multocida_str._Pm70|272843|Tyr|GTA GGAGGGATTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGGC--TCAG--CCTTCGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11755|Photorhabdus_luminescens_subsp._laumondii_TTO1|243265|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ACAG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11765|Porphyromonas_gingivalis_W83|242619|Tyr|GTA GGGCAGTTACCAGAGT--GGCCAAATGGGGCTGACTGTAACTCAGCTGGCT-TAC--GCCTTCGGTGGTTCGAATCCATCACTGCCCA--- tdbD11776|Propionibacterium_acnes_KPA171202|267747|Tyr|GTA GGCAGGTTGCCCGAGT--GGCCAAAGGGAGCGGTCTGTAAAACCGTCGGT--TTCG--CCTACGTTGGTTCGAATCCAACACCTGCCA--- tdbD11594|Pseudomonas_aeruginosa_PAO1|208964|Tyr|GTA GGAGGGATTCCCGAGT--GGCCAAAGGGATCAGACTGTAAATCTGACGTC--ATAG--ACTTCGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11747|Pseudomonas_syringae_pv._tomato_str._DC3000|223283|Tyr|GTA GGAGGGGTTCCCGAGC--GGCCAAAGGGATCAGACTGTAAATCTGACGTCT-ACG--ACTT-CGAAGGTTCGAATCCTTCCCCCTCCACCA tdbD11616|Ralstonia_solanacearum_GMI1000|267608|Tyr|GTA GGAGAGGTGCCCGAGT--GGCTAAAGGGGGCAGACTGTAAATCTGTTGGCT-TAC--GCCTACGTTGGTTCGAATCCAACCCTCTCCACCA tdbD11743|Rhodopirellula_baltica_SH_1|243090|Tyr|GTA GGGGGTTTGCCCGAGT--GGTTAAAGGGGGCGGACTGTAAATCCGCTGGC--TATG--CCTACACAGGTTCGAATCCTGTAGCCCCCA--- tdbD11756|Rhodopseudomonas_palustris_CGA009|258594|Tyr|GTA GGGGGAGTGTCCCGAGT-GGCA-AAGGGAGCTGACTGTAAATCAGCCGCCT-CAT--GGCTTCGCAGGTTCGAGTCCTGCCTCCCCCACCA tdbD11610|Rickettsia_conorii_str._Malish_7|272944|Tyr|GTA GGAGGGGTGGCCGAGT--GGTCAATGGCAGCAGACTGTAAATCTGCCCGCG-TAAG-CGTT-CGAAGGTTCAAATCCTTCTCCCTCCACCA tdbD11695|Rickettsia_prowazekii_str._Madrid_E|272947|Tyr|GTA GGAGGGGTGGCCGAGT--GGTCAATGGCAGCAGACTGTAAATCTGCCCGCG-TAAG-CGTT-CGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11766|Rickettsia_typhi_str._Wilmington|257363|Tyr|GTA GGAGGGGTGGCCGAGT--GGTCAATGGCAGCAGACTGTAAATCTGCCCGCG-TAAG-CGTT-CGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11621|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|220341|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ACAG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11742|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|209261|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ACAG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11614|Salmonella_typhimurium_LT2|99287|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11717|Shewanella_oneidensis_MR-1|211586|Tyr|GTA GGAGGGGTTCCCGAGT--GGCCAAAGGGATCAGACTGTAAATCTGACGGC--TCCG--CCTTCGAAGGTTCGAATCCTTCTCCCTCCACCA tdbD11718|Shigella_flexneri_2a_str._301|198214|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11622|Sinorhizobium_meliloti_1021|266834|Tyr|GTA GGAGGGATGCCCGAGT--GGTTAAAGGGGACGGACTGTAAATCCGTTGGC--TCAG--CCTACGTTGGTTCAAATCCAACTCCCTCCACCA tdbD11757|Staphylococcus_aureus_subsp._aureus_MRSA252|282458|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCA--- tdbD11697|Staphylococcus_aureus_subsp._aureus_MW2|196620|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCA--- tdbD11571|Staphylococcus_aureus_subsp._aureus_N315|158879|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCA--- tdbD11728|Staphylococcus_epidermidis_ATCC_12228|176280|Tyr|GTA GGAGGGGTAGCGAAGT--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGCAGTTCGAATCTGCCCCCCTCCACCA tdbD3525|Stigmatella_aurantiaca|41|Tyr|GTA GGAGGGATACCCAAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGGCT-CTAC-GCCTTCGATGGTTCGAATCCATCTCCCTCCA--- tdbD11720|Streptococcus_agalactiae_2603V/R|208435|Tyr|GTA GGAGAGATAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCTCTCTCCA--- tdbD11699|Streptococcus_agalactiae_NEM316|211110|Tyr|GTA GGAGAGATAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCTCTCTCCA--- tdbD11722|Streptococcus_mutans_UA159|210007|Tyr|GTA GGAAGGGTAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCCCCTTCCA--- tdbD11606|Streptococcus_pneumoniae_TIGR4|170187|Tyr|GTA GGAGAGATAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCTCTCTCCA--- tdbD11605|Streptococcus_pyogenes_M1_GAS|160490|Tyr|GTA GGAAAGATAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCTCTTTCCA--- tdbD11701|Streptococcus_pyogenes_MGAS315|198466|Tyr|GTA GGAAAGATAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCTCTTTCCA--- tdbD11734|Streptococcus_pyogenes_SSI-1|193567|Tyr|GTA GGAAAGATAGCGAAGA--GGCTAAACGCGGCGGACTGTAAATCCGCTCCT--TCG---GGTTCGGGGGTTCGAATCCCTCTCTTTCCA--- tdbD11741|Streptomyces_avermitilis_MA-4680|227882|Tyr|GTA GGCGGTGTGCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGGC--TCAG--CCTTCCCAGGTTCGAATCCTGGCGCCGCCA--- tdbD11716|Streptomyces_coelicolor_A3(2)|100226|Tyr|GTA GGCGGTGTGCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGGC--TCAG--CCTTCCCAGGTTCGAATCCTGGCGCCGCCA--- tdbD3519|Streptomyces_lividans|1916|Tyr|GTA GGCGGTGTGCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGGC--TCAG--CCTTCCCAGGTTCGAATCCTGGCGCCGCCA--- tdbD11767|Symbiobacterium_thermophilum_IAM_14863|292459|Tyr|GTA GGGGAGATACCCAAGT--GGTCAAAGGGGGCTGACTGTAAATCAGTTGCGT-AAC--GCTT-CGGAGGTTCGAATCCTCCTCTCCCCACCA tdbD11595|Synechocystis_sp._PCC_6803|1148|Tyr|GTA GGGTCGATGCCCGAGT--GGTTAATGGGGGCGGACTGTAAATCCGCTGGC--TATG--CCTACGCTGGTTCAAATCCAGCTCGGCCCA--- tdbD11704|Thermoanaerobacter_tengcongensis_MB4|273068|Tyr|GTA GGAGGGATACCCAAGC--GGCCAAAGGGGGCAGACTGTAAATCTGCTGGCG-TATG-CCTT-CGATGGTTCAAATCCATCTCCCTCCACCA tdbD11702|Thermosynechococcus_elongatus_BP-1|197221|Tyr|GTA GGGTCGGTGCCCGAGT--GGTTAATGGGGGCGGACTGTAAATCCGTTGGC--TACG--CCTACGCTGGTTCGAATCCAGCCCGGCCCA--- tdbD11596|Thermotoga_maritima_MSB8|243274|Tyr|GTA GGTGGGGTGCCCGAGT--GGCCAAAGGGGGCGGACTGTAAATCCGCTGGCA-GAAT-GCCTTCGGAGGTTCAAATCCTCCCCCCACCACCA tdbD11777|Thermus_thermophilus_HB27|262724|Tyr|GTA -GGCAGGTGCCCGAGC--GGCCAAAGGGGACGGTCTGTAAAACCGTTGGCG-TATG-CCTT-CGCTGGTTCGAATCCAGCCCTGCCCACCA tdbD11778|Treponema_denticola_ATCC_35405|243275|Tyr|GTA GGGGAGTTTCCCGAGC--GGTCAAAGGGGGCAGACTGTAAATCTGTTGGC--TATG--CCTTCCAAGGTCCGAATCCTTGACTCCCCA--- tdbD11593|Treponema_pallidum_subsp._pallidum_str._Nichols|243276|Tyr|GTA GGGGAGTTTCCCGAGT--GGTCAAAGGGAGCAGACTGTAAATCTGTTGGCG-TTG--TCTT-CCAAGGTTCGAATCCTTGACTCCCCA--- tdbD11729|Tropheryma_whipplei_str._Twist|203267|Tyr|GTA GGCGAGTTACCCAAGT--GGCCAAAGGGATCTGACTGTAAATCAGCTGTCA-TTC--GACTTCGGGGGTTCGAATCCCTCACTCGCCA--- tdbD11730|Tropheryma_whipplei_TW08/27|218496|Tyr|GTA GGCGAGTTACCCAAGT--GGCCAAAGGGATCTGACTGTAAATCAGCTGTCA-TTC--GACTTCGGGGGTTCGAATCCCTCACTCGCCA--- tdbD11574|Ureaplasma_parvum_serovar_3|38504|Tyr|GTA GGACAGATAGCGAAGT--GGCCAAACGCATCCGGCTGTAACCCGGCTCCG--AGA---GGTTCGTAGGTTCGAATCCTACTCTGTCCACCA tdbD11570|Vibrio_cholerae_O1_biovar_El_Tor_str._N16961|243277|Tyr|GTA GGAGGGGTTCCCGAGT--GGCCAAAGGGAGCAGACTGTAAATCTGCCGGC--TCCG--CCTTCGATGGTTCGAATCCGTCCCCCTCCACCA tdbD11779|Wolbachia_endosymbiont_of_Drosophila_melanogaster|163164|Tyr|GTA GGAGGAGTGACCGAGT--GGTTAAAGGTAACAGACTGTAAATCTGTCCGCG-TGAG-CGTA-CGTAGGTTCGAATCCTACCTCCTCCA--- tdbD11706|Xanthomonas_axonopodis_pv._citri_str._306|190486|Tyr|GTA GGAGGGATACCCAAGC--GGCCAACGGGGGCAGACTGTAAATCTGCTGGCT-TAC--GCCTTCGGTGGTTCGAATCCACCTCCCTCCACCA tdbD11705|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|190485|Tyr|GTA GGAGGGATACCCAAGC--GGCCAACGGGGGCAGACTGTAAATCTGCTGGCT-TAC--GCCTTCGGTGGTTCGAATCCACCTCCCTCCACCA tdbD11598|Xylella_fastidiosa_9a5c|160492|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACC- tdbD11731|Xylella_fastidiosa_Temecula1|183190|Tyr|GTA GGAGGGATACCCAAGC--GGCCAACGGGGGCAGACTGTAAATCTGCTGGCT-TGC--GCCTTCGGTGGTTCGAATCCACCTCCCTCCACCA tdbD11769|Yersinia_pestis_biovar_Microtus_str._91001|229193|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11613|Yersinia_pestis_CO92|214092|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11708|Yersinia_pestis_KIM|187410|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA tdbD11770|Yersinia_pseudotuberculosis_IP_32953|273123|Tyr|GTA GGTGGGGTTCCCGAGC--GGCCAAAGGGAGCAGACTGTAAATCTGCCGTC--ATCG--ACTTCGAAGGTTCGAATCCTTCCCCCACCACCA #=GC SS_cons (((((((..((((...........)))).(((((.......))))).................(((((.......)))))))))))).... #=GC SN 0000000..1111...........1111.22222.......22222.................33333.......333330000000.... #=GF CS 91 columns, 21 paired, 19 covariant; 4 stems //