# STOCKHOLM 1.0 BACTERIAL Asn #=GC CS .2356553..22.2.........2.22.553.2.......2.355.....4552.........25543556532.... #=GC BP .+++++++..++++.........++++.+++++.......+++++.....+++++.......++++++++++++.... tdbD1939|Acholeplasma_laidlawii|2148|Asn|GTT -GCCTACTTAGCTCAGTTGGTTAGAGCACCTGACTGTTAATCAGGGGGTCGCTGGTTCGAGTCCAGCAGTGGGCGCCA tdbD8022|Acinetobacter_sp._ADP1|62977|Asn|GTT -TCTCCCATAGCTCAGTCGGT-AGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGCCCAGGTGGGAGAGCCA tdbD7859|Agrobacterium_tumefaciens_str._C58|176299|Asn|GTT -TCCCTGGTAGCTCAGC-GGT-AGAGCATTCGACTGTTAATCGACAGGTCGCCGGTTCGAATCCGGCCCGGGGAGCCA tdbD7833|Aquifex_aeolicus_VF5|224324|Asn|GTT -TCCGGGGTAGCTCAATCGGC-AGAGCGGGTGGCTGTTAACCACCTGGTTGGGGGTTCGAGTCCCTCCCCCGGAGCCA tdbD8024|Bacillus_anthracis_str._A2012|191218|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCAAGTCCTACCTGCGGAGCCA tdbD7983|Bacillus_anthracis_str._Ames|198094|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGCGGAGCCA tdbD7995|Bacillus_anthracis_str._Sterne|260799|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGCGGAGCCA tdbD8011|Bacillus_cereus_ATCC_10987|222523|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGCGGAGCCA tdbD7971|Bacillus_cereus_ATCC_14579|226900|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGCGGAGCCA tdbD7952|Bacillus_halodurans_C-125|272558|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCAATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGCGGAGCCA tdbD1949|Bacillus_sp._PS3|2334|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCAATCGGCTGTTAACCGATTGGTCGCAGGTTCGAATCCTGCCTGCGGAGCCA tdbD7799|Bacillus_subtilis_subsp._subtilis_str._168|224308|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAG--- tdbD8027|Bacillus_thuringiensis_serovar_konkukian_str._97-27|281309|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGCGGAGCCA tdbD7981|Bacteroides_thetaiotaomicron_VPI-5482|226186|Asn|GTT -TCTTCCTTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAGAGGAAGAG--- tdbD7985|Bartonella_henselae_str._Houston-1|283166|Asn|GTT -TCCCCGGTAGCTCAGT-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCCA tdbD8029|Bartonella_quintana_str._Toulouse|283165|Asn|GTT -TCCCCGGTAGCTCAGT-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCCA tdbD7986|Bdellovibrio_bacteriovorus_HD100|264462|Asn|GTT -TCAGAAGTAGCTCAGTCGGT-AGAGCAAGCGGCTGTTAACCGCTGGGTCGGGGGTTCGAGTCCCTCCTTCTGAGCCA tdbD7936|Bifidobacterium_longum_NCC2705|206672|Asn|GTT -TCCTGCGTAGCTCAGTTGGC-AGAGCATCCGACTGTTAATCGGACGGTCGCTGGTTCAAGCCCAGCCGCAGGAG--- tdbD7821|Borrelia_burgdorferi_B31|224326|Asn|GTT -TCCCCTATAGCTCAGT-GGT-AGAGCGGGTGGCTGTTAACCACTAGGTCGGAGGTTCAAGTCCTTCTGGGGGAG--- tdbD7997|Borrelia_garinii_PBi|290434|Asn|GTT -TCCCCTATAGCTCAGT-GGT-AGAGCGGGTGGCTGTTAACCACTAGGTCGGAGGTTCAAGTCCTTCTGGGGGAG--- tdbD7953|Bradyrhizobium_japonicum_USDA_110|224911|Asn|GTT -TCCTCGGTAGCTCAGC-GGT-AGAGCATCCGACTGTTAATCGGATGGTCGCTGGTTCGAATCCAGCCCGGGGAGCCA tdbD7849|Brucella_melitensis_16M|224914|Asn|GTT -TCCCCGGTAGCTCAGC-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCCA tdbD7939|Brucella_suis_1330|204722|Asn|GTT -TCCCCGGTAGCTCAGC-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCCA tdbD7802|Buchnera_aphidicola_str._APS_(Acyrthosiphon_pisum)|107806|Asn|GTT -TCCTCTGTAGTTCAGTTGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAATCCAGTCGGAGGAG--- tdbD7973|Buchnera_aphidicola_str._Bp_(Baizongia_pistaciae)|224915|Asn|GTT -TCCTCTGTAGTTCAGTTGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAATCCAGTCAGGGGAG--- tdbD7918|Buchnera_aphidicola_str._Sg_(Schizaphis_graminum)|198804|Asn|GTT -TCCTCTGTAGTTCAGTTGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGCCCAGTCAGGGGAG--- tdbD7822|Campylobacter_jejuni_subsp._jejuni_NCTC_11168|192222|Asn|GTT -TCCGGATTAGCTCAGC-GGT-AGAGTAGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAATCCTACATCCGGAGCCA tdbD8030|Candidatus_Blochmannia_floridanus|203907|Asn|GTT -TCCTCTGTAGTTCAGTTGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCAAATCCAGTCAGGGGAGCCA tdbD7990|Candidatus_Protochlamydia_amoebophila_UWE25|264201|Asn|GTT -TCCGGATTAGCTCAGC-GGT-AGAGCAGTGGACTGTTAATCCATTGGTCGCTAGTTCGAATCTAGCATCCGGAG--- tdbD7823|Caulobacter_crescentus_CB15|190650|Asn|GTT -TCCGCGGTAGCTCAGT-GGT-AGAGCAGCCGGCTGTTAACCGGCTGGTCGTAGGTTCGAATCCTACCCGCGGAGCCA tdbD7842|Chlamydia_muridarum_Nigg|243161|Asn|GTT -TCCGGAGTAGCTCAGC-GGT-AGAGCAGTGGACTGTTAATCCATTGGTCGTTGGTTCGAACCCATCCTCCGGAG--- tdbD7797|Chlamydia_trachomatis_D/UW-3/CX|272561|Asn|GTT -TCCGGAGTAGCTCAGC-GGT-AGAGCAGTGGACTGTTAATCCATTGGTCGTTGGTTCGAACCCATCCTCCGGAG--- tdbD7795|Chlamydophila_pneumoniae_AR39|115711|Asn|GTT -TCCGGAGTAGCTCAGC-GGT-AGAGCAGTGGACTGTTAATCCATTGGTCGTTGGTTCGAACCCATCCTCCGGAG--- tdbD7796|Chlamydophila_pneumoniae_CWL029|115713|Asn|GTT -TCCGGAGTAGCTCAGC-GGT-AGAGCAGTGGACTGTTAATCCATTGGTCGTTGGTTCGAACCCATCCTCCGGAG--- tdbD7812|Chlamydophila_pneumoniae_J138|138677|Asn|GTT -TCCGGAGTAGCTCAGC-GGT-AGAGCAGTGGACTGTTAATCCATTGGTCGTTGGTTCGAACCCATCCTCCGGAG--- tdbD7915|Chlorobium_tepidum_TLS|194439|Asn|GTT -TCCGCGATAGCTCAAT-GGT-AGAGCATTCGGCTGTTAACCGAAGGGTTGTAGGTTCGAATCCTACTCGCGGAG--- tdbD7847|Clostridium_acetobutylicum_ATCC_824|272562|Asn|GTT -TCCGTGATAGCTCAAC-GGT-GGAGCACTCGGCTGTTAACCGATAGGTTGAAGGTTCGAATCCTTTTCACGGAGCCA tdbD7841|Clostridium_perfringens_str._13|195102|Asn|GTT -TCCTCGGTAGCTCAAT-GGT-GGAGCACTCGGCTGTTAACCGATAGGTTGGAGGTTCGAGTCCTCTCCGAGGAGCCA tdbD7955|Clostridium_tetani_E88|212717|Asn|GTT -TCCGTGGTAGCTCAAT-GGT-GGAGCATTCGGCTGTTAACCGAAGGGTTGAAGGTTCGAATCCTTTCCACGGAGCCA tdbD7987|Corynebacterium_diphtheriae_NCTC_13129|257309|Asn|GTT -TCCCCCATAGCTCAATTGGC-AGAGCATTCGACTGTTAATCGAAGGGTTACTGGTTCGAGTCCAGTTGGGGGAG--- tdbD7940|Corynebacterium_efficiens_YS-314|196164|Asn|GTT -TCCTCCATAGCTCAGTTGGC-AGAGCATTCGACTGTTAATCGAAGGGTCACTGGTTCGAGCCCAGTTGGAGGAG--- tdbD7920|Corynebacterium_glutamicum_ATCC_13032|196627|Asn|GTT TTCCTCCATAGCTCAGTTGGC-AGAGCATTCGACTGTTAATCGAAGGGTCACTGGTTCGAGCCCAGTTGGAGGAG--- tdbD7970|Coxiella_burnetii_RSA_493|227377|Asn|GTT -TCCTCGGTAGCTCAGTCGGT-AGAGCAGGTGACTGTTAATCACTTGGTCGGGGGTTCAAGTCCCTCCCGAGGAGCCA tdbD7824|Deinococcus_radiodurans_R1|243230|Asn|GTT -TCGGCAGTAGCTCAGT-GGC-AGAGCATCCGACTGTTAATCGGACGGTCGTTGGTTCGACCCCAACCTGCCGAGCCA tdbD8013|Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough|882|Asn|GTT -TCCCCGGTGGCTCAATCGGC-AGAGCGGGTGACTGTTAATCACTAGGTTGGCGGTTCAAGTCCGTCCCGGGGAGCCA tdbD7956|Enterococcus_faecalis_V583|226185|Asn|GTT -TCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAG--- tdbD7974|Escherichia_coli_CFT073|199310|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7813|Escherichia_coli_K12|83333|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7814|Escherichia_coli_O157:H7|83334|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7816|Escherichia_coli_O157:H7_EDL933|155864|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7916|Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586|190304|Asn|GTT -GCTTCCTTAGCTCAGTCGGT-AGAGCATGCGGCTGTTAACCGCAGCGTCAATGGTTCGAGTCCATTAGGAAGCGCCA tdbD7998|Geobacter_sulfurreducens_PCA|243231|Asn|GTT -TCCCCAATAGCTCAGTCGGT-AGAGCGGGTGGCTGTTAACCACCATGTCCCTGGTTCGAGTCCGGGTTGGGGAGCCA tdbD7820|Haemophilus_influenzae_Rd_KW20|71421|Asn|GTT -TCCTCCTTAGTTCAGTCGGT-AGAACGGTGGACTGTTAATCCATATGTCGCTGGTTCAAGTCCAGCAGGAGGAGCCA tdbD7966|Helicobacter_hepaticus_ATCC_51449|235279|Asn|GTT -TCCGGATTAGCTCAGC-GGT-AGAGTAGGTGGCTGTTAACCACTTGGTCGCAGGTTCGAATCCTGCATCCGGAGCCA tdbD7817|Helicobacter_pylori_26695|85962|Asn|GTT -TCCAGATTAGCTCAGC-GGT-AGAGTAGGCGGCTGTTAACCGCTTGGTCGTAGGTTCGAATCCTACATCTGGAGCCA tdbD7818|Helicobacter_pylori_J99|85963|Asn|GTT -TCCAGATTAGCTCAGC-GGT-AGAGTAGGCGGCTGTTAACCGCTTGGTCGTAGGTTCCAATCCTACATCTGGAACCA tdbD1944|Klebsiella_aerogenes|28451|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD1945|Lactobacillus_delbrueckii_subsp._bulgaricus|1585|Asn|GTT -TCCGCCTTAGCTCAGTTGGT-AGAGCGCTTGACTGTTAATCAGGATGTCGTCAGTTCGAGTCTGACAGGCGGAG--- tdbD7999|Lactobacillus_johnsonii_NCC_533|257314|Asn|GTT -TCCGGCTTAGCTCAGTTGGT-AGAGCACCTGACTGTTAATCAGGTTGTCGTCAGTTCGAGTCTGACAGCCGGAG--- tdbD7958|Lactobacillus_plantarum_WCFS1|220668|Asn|GTT -GTGGCCTTAGCTCAGTTGGT-AGAGCACCTGACTGTTAATCAGGTTGTCGCTGGTTCGAGTCCAGCAGGCTACG--- tdbD1946|Lactococcus_lactis|1358|Asn|GTT -TGCGGATTAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTCAGTTCGAGTCTGACATCCGCAG--- tdbD8001|Leifsonia_xyli_subsp._xyli_str._CTCB07|281090|Asn|GTT -TCCTCGATAGCTCAATTGGC-AGAGCAGCCGGCTGTTAACCGGCAGGTTCTTGGTTCGAGTCCAAGTCGGGGAC--- tdbD7941|Leptospira_interrogans_serovar_Lai_str._56601|189518|Asn|GTT -TCCCCTTTAGCTCAGTCGGT-AGAGCAAGTGACTGTTAATCACTGGGTCGCTGGTTCGAGCCCAGCAGGGGGAGCCA tdbD7834|Listeria_innocua_Clip11262|272626|Asn|GTT -TCCACAGTAGCTCAGTTGGT-AGAGCAATCGGCTGTTAACCGATCGGTCGCAGGTTCGAGTCCTGCCTGTGGAG--- tdbD1951|Listeria_ivanovii|1638|Asn|GTT -TCCACAGTAGCTCAGTTGGT-AGAGCAATCGGCTGTTAACCGATCGGTCGCAGGTTCGAGTCCTGCCTGTGGAGCCA tdbD7837|Listeria_monocytogenes_EGD-e|169963|Asn|GTT -TCCACAGTAGCTCAGTTGGT-AGAGCAATCGGCTGTTAACCGATCGGTCGCAGGTTCGAGTCCTGCCTGTGGAG--- tdbD8014|Listeria_monocytogenes_str._4b_F2365|265669|Asn|GTT -TCCACAGTAGCTCAGTTGGT-AGAGCAATCGGCTGTTAACCGATCGGTCGCAGGTTCGAGTCCTGCCTGTGGAG--- tdbD8016|Mesoplasma_florum_L1|265311|Asn|GTT -GGCTTTTTAGCTCAGTTGGT-AGAGCAACCGGCTGTTAACCGGTTTGTCACAGGTTCAAGTCCTGTAAAAGCCGCCA tdbD7850|Mesorhizobium_loti_MAFF303099|266835|Asn|GTT -TCCCCGGTAGCTCAGT-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCCA tdbD7967|Mycobacterium_bovis_AF2122/97|233413|Asn|GTT -TCCCCTGTAGCTCAATTGGC-AGAGCGTTCGGCTGTTAACCGAAGGGTTGGAGGTTCGAGTCCTCCCGGGGGAG--- tdbD7810|Mycobacterium_leprae_TN|272631|Asn|GTT -TCCCCTGTAGCTCAATTGGC-AGAGCATTCGGCTGTTAACCGAACGGTTGGAGGTTCGAGTCCTCCCGGGGGAG--- tdbD7803|Mycobacterium_tuberculosis_CDC1551|83331|Asn|GTT -TCCCCTGTAGCTCAATTGGC-AGAGCGTTCGGCTGTTAACCGAAGGGTTGGAGGTTCGAGTCCTCCCGGGGGAG--- tdbD7989|Mycobacterium_tuberculosis_H37Rv|83332|Asn|GTT -TCCCCTGTAGCTCAATTGGC-AGAGCGTTCGGCTGTTAACCGAAGGGTTGGAGGTTCGAGTCCTCCCGGGGGAG--- tdbD1935|Mycoplasma_capricolum|2095|Asn|GTT -GGCTTTTTAGCTCAGCAGGT-AGAGCAACCGGCTGTTAACCGGTTTGTCACAGGTTCGAGCCCTGTAAAAGCCGCCA tdbD7965|Mycoplasma_gallisepticum_R|233150|Asn|GTT -GGCCACATAGCTCAGC-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCACAGGTTCAAATCCTGTTGTGGCCGCCA tdbD7825|Mycoplasma_genitalium_G37|243273|Asn|GTT -GGCCACATAGCTCAGC-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCACAGGTTCGATCCCTGTTGTGGCCGCCA tdbD1937|Mycoplasma_mycoides|2102|Asn|GTT -GGCTTTTTAGCTCAGCAGGT-AGAGCAACCGGCTGTTAACCGGTTTGTCACAGGTTCGAGCCCTGTAAAAGCCGCCA tdbD7826|Mycoplasma_pneumoniae_M129|272634|Asn|GTT -GGCCACATAGCTCAGC-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCACAGGTTCGATCCCTGTTGTGGCCGCCA tdbD7858|Mycoplasma_pulmonis_UAB_CTIP|272635|Asn|GTT -GCCGATTTAGCTCAGT-GGT-AGAGCAGCTGGCTGTTAACCAGTTGGTCACAAGTTCAAATCTTGTAATCGGCGCCA tdbD7805|Neisseria_meningitidis_MC58|122586|Asn|GTT -TCCCCGATAGCTCAGTCGGT-AGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGCCCAGGTCGGGGAGCCA tdbD7980|Nitrosomonas_europaea_ATCC_19718|228410|Asn|GTT -TCCCCGATAGCTCAGTCGGT-AGAGCGACGGACTGTTAATCCGCAGGTCCCAGGTTCGAGCCCTGGTCGGGGAGCCA tdbD7857|Nostoc_sp._PCC_7120|103690|Asn|GTT -TCCTCAGTAGCTCAGT-GGT-AGAGCGATCGACTGTTAATCGATTGGTCACTGGTTCGAATCCAGTCTGGGGAG--- tdbD7942|Oceanobacillus_iheyensis_HTE831|221109|Asn|GTT -TCCACAGTAGCTCAGT-GGT-AGAGCAATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGTGGAGCCA tdbD7988|Onion_yellows_phytoplasma_OY-M|262768|Asn|GTT -GCCTACGTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTAGGTTCGAGTCCTAGCGTGGGCGCCA tdbD7827|Pasteurella_multocida_subsp._multocida_str._Pm70|272843|Asn|GTT -TCCTCCTTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCGCTGGTTCAAGTCCAGCAGGAGGAGCCA tdbD7992|Photorhabdus_luminescens_subsp._laumondii_TTO1|243265|Asn|GTT -TCCTCCATAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCAAGTCCAGTTGGAGGAGCCA tdbD8003|Porphyromonas_gingivalis_W83|242619|Asn|GTT -GCTTTCTTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCGAGCCCAAGAGAAAGCG--- tdbD8017|Propionibacterium_acnes_KPA171202|267747|Asn|GTT -TCCCCTGTAGCTCAATTGGC-AGAGCATCTGACTGTTAATCAGAGGGTTACTGGTTCGAGTCCAGTCGGGGGAG--- tdbD7829|Pseudomonas_aeruginosa_PAO1|208964|Asn|GTT -TCCGCGATAGCTCAGTCGGT-AGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAGTCCAGGTCGCGGAGCCA tdbD7982|Pseudomonas_syringae_pv._tomato_str._DC3000|223283|Asn|GTT -TCCGCGATAGCTCAGTTGGT-AGAGCAAGTGACTGTTAATCACTGGGTCCCTGGTTCGAGTCCAGGTCGTGGAGCCA tdbD7854|Ralstonia_solanacearum_GMI1000|267608|Asn|GTT -TCCCCGATAGCTCAGTCGGT-AGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGAGCCCAGGTCGGGGAGCCA tdbD7978|Rhodopirellula_baltica_SH_1|243090|Asn|GTT -TCCCCTGTAGCTCAGTTGGT-AGAGCAGGCGGCTGTTAACCGCCTTGTCACAGGTTCGAGTCCTGTCGGGGGAG--- tdbD7993|Rhodopseudomonas_palustris_CGA009|258594|Asn|GTT -TCCCTGGTAGCTCAGT-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGCTGGTTCGAATCCGGCCCGGGGAGCCA tdbD7848|Rickettsia_conorii_str._Malish_7|272944|Asn|GTT -TCCTCGGTAGCTTAGT-GGT-AGAGCAAACGGCTGTTAACCGTTCGGTCGCTGGTTCGAGTCCGGCCCGGGGAGCCA tdbD7919|Rickettsia_prowazekii_str._Madrid_E|272947|Asn|GTT -TCCTCGGTAGCTCAGT-GGT-AGAGCAAACGGCTGTTAACCGTTCGGTCGCTGGTTCGAGTCCGGCCCGGGGAGCCA tdbD8004|Rickettsia_typhi_str._Wilmington|257363|Asn|GTT -TCCTCGGTAGCTCAGT-GGT-AGAGCAAACGGCTGTTAACCGTTCGGTCGCTGGTTCGAGTCCGGCCCGGGGAGCCA tdbD7860|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|220341|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7976|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|209261|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7853|Salmonella_typhimurium_LT2|99287|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7945|Shewanella_oneidensis_MR-1|211586|Asn|GTT -TCCCCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCAAGTCCAGTCAGGGGAGCCA tdbD7947|Shigella_flexneri_2a_str._301|198214|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7861|Sinorhizobium_meliloti_1021|266834|Asn|GTT -TCCCTGGTAGCTCAGC-GGT-AGAGCACTCGACTGTTAATCGATAGGTCGCCGGTTCGAATCCGGCCCGGGGAGCCA tdbD7994|Staphylococcus_aureus_subsp._aureus_MRSA252|282458|Asn|GTT -TCCACAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCA tdbD7921|Staphylococcus_aureus_subsp._aureus_MW2|196620|Asn|GTT -TCCACAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCA tdbD7809|Staphylococcus_aureus_subsp._aureus_N315|158879|Asn|GTT -TCCACAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAGTCCTACCTGTGGAGCCA tdbD7960|Staphylococcus_epidermidis_ATCC_12228|176280|Asn|GTT -TCCGCAGTAGCTCAGT-GGT-AGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCA tdbD7949|Streptococcus_agalactiae_2603V/R|208435|Asn|GTT -TCCGCCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGGCGGAG--- tdbD7922|Streptococcus_agalactiae_NEM316|211110|Asn|GTT -TCCGCCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGGCGGAG--- tdbD7950|Streptococcus_mutans_UA159|210007|Asn|GTT -TCCGGCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGCCGGAG--- tdbD7845|Streptococcus_pneumoniae_TIGR4|170187|Asn|GTT -TCCGCCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGGCGGAG--- tdbD7843|Streptococcus_pyogenes_M1_GAS|160490|Asn|GTT -TCCGCCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGGCGGAG--- tdbD7924|Streptococcus_pyogenes_MGAS315|198466|Asn|GTT -TCCGCCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGGCGGAG--- tdbD7968|Streptococcus_pyogenes_SSI-1|193567|Asn|GTT -TCCGCCATAGCTCAGTTGGTAGTAGCGCATGACTGTTAATCATGATGTCGTAGGTTCGAGTCCTACTGGCGGAG--- tdbD7975|Streptomyces_avermitilis_MA-4680|227882|Asn|GTT -TCCTCCGTAGCTCAATTGGC-AGAGCAGCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAG--- tdbD7943|Streptomyces_coelicolor_A3(2)|100226|Asn|GTT -TCCTCCGTAGCTCAATTGGC-AGAGCAGCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAG--- tdbD1943|Streptomyces_lividans|1916|Asn|GTT -TCCTCCGTAGCTCAATTGGC-AGAGCAGCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAG--- tdbD8005|Symbiobacterium_thermophilum_IAM_14863|292459|Asn|GTT -TCCGGCGTAGCTCAGC-GGT-AGAGCGTCCGGCTGTTAACCGGAGGGTCGTAGGTTCGAATCCTACCGCCGGAGCCA tdbD7830|Synechocystis_sp._PCC_6803|1148|Asn|GTT -TCCTCGGTAGCTCAGT-GGT-AGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAATCCTACCCGGGGAG--- tdbD7928|Thermoanaerobacter_tengcongensis_MB4|273068|Asn|GTT -TCCTCAGTAGCTCAAG-GGT-AGAGCAACCGGCTGTTAACCGGTAGGTTGTAGGTTCGAATCCTACCTGAGGAGCCA tdbD7926|Thermosynechococcus_elongatus_BP-1|197221|Asn|GTT -TCCTCAGTAGCTCAGC-GGT-AGAGCGGTCGGCTGTTAACCGATTGGTCGCTGGTTCGAATCCAGCCTGGGGAG--- tdbD7831|Thermotoga_maritima_MSB8|243274|Asn|GTT -TCCGGCGTAGCTCAACCGGT-AGAGCGCCTGGCTGTTAACCAGGTGGTTGCAGGTTCGAGTCCTGCCGCCGGAGCCA tdbD8018|Thermus_thermophilus_HB27|262724|Asn|GTT --CCGCGGTAGCTCAGCAGGT-AGAGCAGCCGGCTGTTAACCGGTAGGTCGCAGGTTCGAGTCCTGCCCGCGGAGCCA tdbD8019|Treponema_denticola_ATCC_35405|243275|Asn|GTT -TCCCCTGTAGCTCAGTAGGC-AGAGCAAGTGGCTGTTAACCACTGGGTCCGTGGTTCGAACCCGCGCGGGGGAG--- tdbD7828|Treponema_pallidum_subsp._pallidum_str._Nichols|243276|Asn|GTT -TCCCCTGTAGCTCAGTTGGT-AGAGCAAATGGCTGTTAACCATTGGGTCCGTGGTTCGAGCCCGCGCGGGGGAG--- tdbD7962|Tropheryma_whipplei_str._Twist|203267|Asn|GTT -TCCTCGATAGCTCAATTGGC-AGAGCAGCCGGCTGTTAACCGGCAGGTTCTTGGTTCGAGTCCAAGTCGGGGAG--- tdbD7963|Tropheryma_whipplei_TW08/27|218496|Asn|GTT -TCCTCGATAGCTCAATTGGC-AGAGCAGCCGGCTGTTAACCGGCAGGTTCTTGGTTCGAGTCCAAGTCGGGGAG--- tdbD7811|Ureaplasma_parvum_serovar_3|38504|Asn|GTT -GGCTACATAGCTCAGC-GGT-AGAGCAACCGGCTGTTAACCGGTTGGTCGTAGGTTCGATCCCTACTGTAGCCGCCA tdbD7808|Vibrio_cholerae_O1_biovar_El_Tor_str._N16961|243277|Asn|GTT -TCCTCCTTAGCTCAGTCGGT-AGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCAAGTCCAGCAGGAGGAGCCA tdbD8020|Wolbachia_endosymbiont_of_Drosophila_melanogaster|163164|Asn|GTT -TCCTCGGTAGCTCAGT-GGT-AGAGCAGTTGGCTGTTAACCAATTGGTCGCTGGTTCGAATCCGGCCCGGGGAG--- tdbD7931|Xanthomonas_axonopodis_pv._citri_str._306|190486|Asn|GTT -GCCCGAATAGCTCAGCCGGTTAGAGCACTTGACTGTTAATCAGGGGGTCGTTGGTTCGAGTCCAACTTCGGGCGCCA tdbD7930|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|190485|Asn|GTT -GCCCGAATAGCTCAGCCGGTTAGAGCACTTGACTGTTAATCAGGGGGTCGTTGGTTCGAGTCCAACTTCGGGCGCCA tdbD7832|Xylella_fastidiosa_9a5c|160492|Asn|GTT -GCCCGAATAGCTCAGCCGGTTAGAGCACTTGACTGTTAATCAGGGGGTCGTTGGTTCGAGTCCAACTTCGGGCGCCA tdbD7964|Xylella_fastidiosa_Temecula1|183190|Asn|GTT -GCCCGAATAGCTCAGCCGGTTAGAGCACTTGACTGTTAATCAGGGGGTCGTTGGTTCGAGTCCAACTTCGGGCGCCA tdbD8006|Yersinia_pestis_biovar_Microtus_str._91001|229193|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7851|Yersinia_pestis_CO92|214092|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD7934|Yersinia_pestis_KIM|187410|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA tdbD8007|Yersinia_pseudotuberculosis_IP_32953|273123|Asn|GTT -TCCTCTGTAGTTCAGTCGGT-AGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA #=GC SS_cons .(((((((..((((.........)))).(((((.......))))).....(((((.......)))))))))))).... #=GC SN .0000000..1111.........1111.22222.......22222.....33333.......333330000000.... #=GF CS 78 columns, 21 paired, 18 covariant; 4 stems //