# STOCKHOLM 1.0 MAMMALIA L1 #=GF AU Infernal 1.0.1 #=GC CS 3.22.3...2.23...........32.2.33233.......33233......33...........33..3.22.3. #=GC BP +++++++..++++...........++++.+++++.......+++++.....+++++.......++++++++++++. NC_004920_L1_11670_11739_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_010304_L1_11658_11728_p ACUUUUAAAGGAUA..ACAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAAA-UUGGUGCAACUCCAAAUAAAAGUA NC_010301_L1_11666_11735_p ACUUUUAAAGGAUU..GAAGA.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004919_L1_11672_11741_p ACUUUUAAAGGAUG..GGAGA.-UAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004921_L1_11647_11717_p ACUUUUAAAGGAUA..AGAGC.-UAUCCAUUGGUCUUAGGAACCAAAAAA-UUUGGUGCAACUCCAAAUAAAAGUA NC_004026_L1_11652_11721_p ACUUUUAAAGGAUA..GUAGU.-UAUCCGUUGGUCUUAGGAACCAGAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005129_L1_11667_11736_p ACUUUUAAAGGGUA..AGAGC.-UACCCGUUGGUCUUAGGCACCAAAAAA--CUGGUGCAACUCCAGAUAAAAGUA NC_000934_L1_11666_11735_p ACUUUUAAAGGGUA..AGAGC.-UACCCAUUGGUCUUAGGCACCAAAAAA--CUGGUGCAACUCCAGAUAAAAGUA NC_009574_L1_11672_11741_p ACUUUUAAAGGACA..AGAGC.-UGUCCAUUGGUUUUAGGUACCAAAAAA--CUGGUGCAACUCCAGAUAAAAGUA NC_007596_L1_11670_11739_p ACUUUUAAAGGGUA..AGAGC.-UACCCAUUGGUCUUAGGCACCAAAAAA--CUGGUGCAACUCCAGAUAAAAGUA NC_003314_L1_11675_11744_p ACUUUUAAAGGAUG..GUAGG.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_010302_L1_11684_11753_p ACUUUUAAAGGAUA..GUAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002631_L1_11682_11751_p ACUUUUUUAGGAUA..GAAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002078_L1_11694_11763_p ACUUUUAUAGGAUA..GUAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004031_L1_11690_11760_p ACUUUCAAAGGAUA..AAAGC.-AAUCCAUUGGUCUUAGGAACCAAAAAA-UUUGGUGCAACUCCAAAUGAAAGUA NC_004028_L1_11694_11763_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001913_L1_11702_11771_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_003033_L1_11682_11751_p GCUUUUAAAGGAUG..GCAGU.-UAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGCA NC_011029_L1_11683_11751_p GCUUUUAA-GGAUG..GUAGU.-UAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGCA NC_005358_L1_11679_11748_p GCUUUUAAAGGAUA..GCAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGCA NC_000884_L1_11678_11747_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002658_L1_11922_11991_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUAGUCUUAGGAACUAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009056_L1_11723_11792_p ACUUUUAAAGGAUA..GUAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005314_L1_11699_11768_p ACUUUUAUAGGAUA..GUAGU.-AUUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001892_L1_11692_11761_p ACUUUUAAAGGAUA..GAAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGAAACUCCAAAUAAAAGUA NC_013571_L1_11649_11718_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUGAAAGUA NC_003041_L1_11639_11708_p ACUUUCAUAGGAUA..GGAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUGAAAGUA NC_008064_L1_11643_11712_p ACUUUCAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUGAGAGUA NC_013563_L1_11640_11709_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUGAAAGUA NC_007936_L1_11651_11720_p ACUUUUAUAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_013276_L1_11653_11722_p ACUUUUAUAGGAUA..GUAGU.-AAUCCGUUGGUCUUAGGAAUCAAAAAC--UUGGUGCAACUCCAAAUGAAAGUA NC_013068_L1_6343_6412_p ACUUUUAUAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUAAAAGUA NC_005089_L1_11671_11741_p ACUUUUAUAGGAUA..AUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAAAUCCAAAUAAAAGUA NC_012387_L1_11672_11742_p ACUUUUAUAGGAUA..AUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAAAUCCAAAUAAAAGUA NC_006914_L1_11672_11742_p ACUUUUAUAGGAUA..AUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAAAUCCAAAUAAAAGUA NC_006915_L1_11674_11744_p ACUUUUAUAGGAUA..AUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAAAUCCAAAUAAAAGUA NC_010339_L1_11674_11744_p ACUUUUAUAGGAUA..AUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAAAUCCAAAUAAAAGUA NC_010650_L1_11667_11739_p ACUUUUAUAGGAUA..GUAGUuUAAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAACUCCAAAUAAAAGUA NC_012389_L1_11660_11730_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAACUCCAAAUAAAAGUA NC_001665_L1_11665_11735_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAACUCCAAAUAAAAGUA NC_012461_L1_11660_11730_p ACUUUUAUAAGAUA..GAAGU.-AAUCUAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_012374_L1_11656_11726_p ACUUUUAUAGGAUA..AUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-CUUGGUGCAACUCCAAAUAAAAGUA NC_011638_L1_11654_11724_p ACUUUUAUAGGAUA..AAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAU-CUUGGUGCAACUCCAAAUAAAAGUA NC_005315_L1_11673_11742_p ACUUUUACAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002369_L1_11699_11768_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007009_L1_11689_11760_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUUUUAGGGACCAAAAAAUAUUGGUGCAACUCCAAAUAAAAGUA NC_009747_L1_11686_11756_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUUUUAGGAACCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_008066_L1_12257_12327_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUUUUAGGAACCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_009748_L1_11683_11754_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUUUUAGGAACCAAAAAAUAUUGGUGCAACUCCAAAUAAAAGUA NC_005943_L1_12257_12327_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGACCUUAGGAGUCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_002764_L1_11733_11803_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGCCUUAGGAGUCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_001992_L1_11690_11760_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGAACCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_006901_L1_11722_11792_p ACUUUUAAAGGAUG..ACAGC.-CAUCCAUUGGCCUUAGGAGCCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_008216_L1_11712_11782_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGAACCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_008219_L1_11709_11779_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGAACCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_008217_L1_11707_11777_p ACUUUUAAAGGAUA..ACAGU.-UAUCCAUUGGUCUUAGGAACCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_008220_L1_11690_11760_p ACUUUUAAAGGAUA..ACAGC.-UGUCCAUUGGUCUUAGGAACCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_008218_L1_11709_11779_p ACUUUUAAAGGAUA..GCAGU.-UAUCCAUUGGUCUUAGGAACCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_008215_L1_11704_11774_p ACUUUUAAAGGAUA..ACAGC.-UAUCCACUGGUCUUAGGAACCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_006900_L1_11713_11783_p ACUUUUAAAGGAUA..ACAGA.-UAUCCGUUGGUCUUAGGAACCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGUA NC_001645_L1_11688_11758_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGACCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_011120_L1_11690_11760_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGACCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_012920_L1_12266_12336_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGCCCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_011137_L1_12261_12331_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGCCCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_001644_L1_11685_11755_p ACUUUUAAAGGAUA..ACAGC.-CAUCCGUUGGUCUUAGGCCCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_001643_L1_11684_11754_p ACUUUUAAAGGAUA..ACAGU.-UAUCCAUUGGUCUUAGGCCCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_002083_L1_11720_11790_p ACUUUUAAAGGAUA..ACAGC.-UAUCCCUUGGUCUUAGGACCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_001646_L1_11710_11780_p ACUUUUAAAGGAUA..ACAGC.-UAUCCCUUGGUCUUAGGACCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_002082_L1_11686_11756_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGACCCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_002763_L1_11690_11760_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAGCCAAAAAUA-UUGGUGCAACUCCAAAUAAAAGCA NC_012775_L1_11651_11721_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAGCCAAAAACA-UUGGUGCAACUCCAAAUAAAAGUA NC_002811_L1_11705_11774_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUCGGCCUUAGGAGCCGAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012774_L1_11724_11793_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUCGGUCUUAGGAACCGAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_010299_L1_11698_11767_p GCUUUUAAAGGAUA..GUAGU.-AAUCCGUUGGCCUUAGGAGUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012763_L1_11727_11796_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAGAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002765_L1_11724_11793_p ACUUUUAAAGGAUG..GGAGC.-CAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012764_L1_11725_11794_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011053_L1_11701_11770_p ACUUUUAAAGGAUA..AGAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012766_L1_11702_11771_p ACUUUUAAAGGAUA..GAAGU.-CAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012769_L1_11702_11771_p ACUUUUAAAGGAUA..GAAGU.-CAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012771_L1_11699_11768_p ACUUUUAAAGGAUA..GAAGU.-CAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_010300_L1_11705_11775_p ACUUUGAAAGGAUA..GAGAG.UCAUCCGUUGGUCUUAGGAACCAAAGAA--UUGGUGCAACUCCGAAUAAAAGUG NC_004025_L1_11692_11761_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012773_L1_11713_11782_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012761_L1_11727_11796_p ACUUUUAAAGGAUA..GAAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012762_L1_11724_11793_p ACUUUUAAAGGAUG..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002521_L1_11655_11724_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011124_L1_11696_11765_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009691_L1_11698_11767_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAGUAAAAGUA NC_008093_L1_11710_11779_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008092_L1_11711_11780_p ACUUUUAUAGGAUA..GGAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAGAUAAAAGUA NC_010340_L1_11709_11778_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002008_L1_11708_11777_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAGAUAAAAGUA NC_011218_L1_11711_11780_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009686_L1_11709_11778_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAGAUAAAAGUA NC_013445_L1_11710_11779_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAGUAAAAGUA NC_013700_L1_11718_11787_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAG--UUGGUGCAACUCCAAAUAAAAGUA NC_008434_L1_11710_11779_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UCGGUGCAACUCCGAAUAAAAGUA NC_010497_L1_11694_11763_p ACUUUUAAAGGAUA..GUAGU.-GAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009692_L1_11694_11763_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011358_L1_11692_11761_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012141_L1_11689_11758_p ACUUUUAAAGGAUA..GUAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009678_L1_11690_11759_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011579_L1_11689_11758_p ACUUUUAAAGGAUA..GUAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009677_L1_11686_11755_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011125_L1_11689_11758_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004029_L1_11698_11767_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAGAUAAAAGUA NC_008417_L1_11702_11771_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAAAGAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008420_L1_11707_11776_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAGAGAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008415_L1_11699_11768_p ACUUUUAAAGGAUA..GAAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004030_L1_11703_11772_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAAAGAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008419_L1_11707_11776_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAAAGAA--UUGGUGCAACUCCAAGUAAAAGUA NC_008418_L1_11703_11772_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAGAGAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008416_L1_11704_11773_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGCCUUAGGAGCCAAAGAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008427_L1_11687_11756_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008426_L1_11691_11760_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001602_L1_12592_12661_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008425_L1_11696_11765_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008424_L1_11696_11765_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008423_L1_11696_11766_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAAA-UUGGUGCAACUCCAAAUAAAAGUA NC_008422_L1_11697_11766_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008421_L1_11702_11771_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008428_L1_11688_11757_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008429_L1_11686_11755_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008430_L1_11686_11755_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001325_L1_12619_12688_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008431_L1_11688_11757_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008433_L1_11685_11754_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008432_L1_11688_11757_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009126_L1_14143_14212_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGCCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAGUAAAAGUA NC_009492_L1_13054_13123_p ACUUUUAGGGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011116_L1_12551_12620_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009968_L1_12579_12648_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009970_L1_12611_12680_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAGUAAAAGUA NC_009969_L1_12555_12624_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_003426_L1_12638_12707_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_003427_L1_12831_12900_p ACUUUUAAAGGAUG..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_003428_L1_12826_12895_p ACUUUUAAAGGAUG..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011112_L1_12574_12643_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009971_L1_12590_12659_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009331_L1_13295_13364_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008753_L1_12664_12733_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011118_L1_13285_13354_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011117_L1_6348_6417_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005212_L1_12587_12656_p ACUUUUAUAGGAUA..GAAGU.-GAUCCAUUGGCCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001700_L1_12564_12633_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008450_L1_12592_12661_p ACUUUUAUAGGAUA..GAAGU.-AACACAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_010641_L1_12653_12722_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAGUAAAAGUA NC_010642_L1_12629_12698_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_010638_L1_12447_12516_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006835_L1_11695_11764_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUGAAAGUA NC_005268_L1_11722_11791_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006930_L1_11714_11783_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006931_L1_11716_11785_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005271_L1_11729_11798_p ACUUUUACAGGAUA..ACAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006926_L1_11728_11798_p ACUUUUACAGGAUA..ACAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAAA-UUGGUGCAACUCCAAAUAAAAGUA NC_006929_L1_11724_11793_p ACUUUUAUAGGAUA..GUAGU.-UAUCCCUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006928_L1_11723_11792_p ACUUUUAUAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAGAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007938_L1_11721_11790_p ACUUUUAUAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001601_L1_12135_12204_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007937_L1_11717_11786_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001321_L1_12138_12207_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006927_L1_11731_11800_p ACUUUUACAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005270_L1_11726_11795_p ACUUUUACAGGAUG..GUAGC.-CAUCCAUUGGUCUUAGGAACCAAAAAU--UUGGUGCAACUCCAAAUAAAAGUA NC_005269_L1_11716_11785_p ACUUUUAUAGGAUA..GCAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAU--UUGGUGCAACUCCAAAUAAAAGUA NC_012061_L1_11719_11788_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012062_L1_11722_11791_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005278_L1_11724_11793_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012057_L1_11722_11791_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGCA NC_012051_L1_11720_11789_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012053_L1_11720_11789_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012058_L1_11720_11789_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012059_L1_11720_11789_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005276_L1_11724_11793_p GCUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGCA NC_007629_L1_11721_11790_p ACUUUUAAAGGAUA..ACAGC.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005279_L1_11718_11787_p ACUUUUAAAGGAUG..GUAGC.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005280_L1_11722_11791_p ACUUUUAAAGGAUG..GUAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUAAAAGUA NC_005272_L1_11716_11785_p ACUUUUAAAGGAUG..GUAGU.-UAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002503_L1_11724_11793_p GCUUUUAAAGGAUG..GGAGU.-UAUCCAUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005275_L1_11716_11785_p ACUUUUAAAGGAUA..AUAGU.-UAUCCAUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAAGUCCAAAUAAAAGUA NC_005277_L1_11725_11794_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005274_L1_11715_11784_p ACUUUUAAAGGAUA..GAAGU.-CAUCCGUUGGUCUUAGGAACCAAAAGC--UUGGUGCGACUCCAAAUGAGAGUG NC_005273_L1_11716_11785_p ACUUUUAAAGGAUA..GAAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_000889_L1_11694_11763_p GCUUUUAAAGGAUG..GUAGC.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGCA NC_012098_L1_11680_11749_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007441_L1_11678_11747_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012346_L1_12039_12108_p ACUUUUAAAGGAUA..GUAGU.-CAUCCGUUGGUCUUAGGAACCGAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006380_L1_12571_12640_p ACUUUUAAAGGAUA..GUAGU.-CAUCCGUUGGUCUUAGGAACCGAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005971_L1_12041_12111_p ACUUUUAAAGGAUA..GUAGU.UUAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012706_L1_12039_12109_p ACUUUUAAAGGAUA..GUAGU.UUAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006853_L1_12038_12108_p ACUUUUAAAGGAUA..GUAGU.UUAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006295_L1_12055_12124_p ACUUUUAAAGGAUG..GUAGU.-UAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_013069_L1_11680_11749_p ACUUUUAAAGGAUA..GCAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005044_L1_11676_11745_p ACUUUUAAAGGAUG..GUAGU.-UAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012096_L1_11678_11747_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_013751_L1_11665_11736_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAACUCUUGGUGCAACUCCAAAUAAAAGUA NC_010640_L1_11677_11746_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007704_L1_11701_11770_p ACUUUUAGAGGAUG..ACAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006993_L1_11680_11749_p ACUUUUAGAGGAUG..GCAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008462_L1_11688_11757_p ACUUUUAGAGGAUG..GCAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007179_L1_11690_11759_p ACUUUUAGAGGAUG..GCAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006973_L1_11682_11751_p ACUUUUAGAGGAUG..ACAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008414_L1_11690_11759_p ACUUUUAGAGGAUG..GCAGA.-AAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAGGUA NC_011821_L1_11675_11744_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008749_L1_11678_11747_p ACUUUUAAAGGAUG..GCAGU.-UAUCCAUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004069_L1_11681_11750_p ACUUUUAGAGGAUG..ACAGA.-UAUCCGUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008491_L1_11682_11751_p ACUUUUAGAGGAUG..ACAGA.-UAUCCGUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007703_L1_11681_11750_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012100_L1_11679_11748_p ACUUUUAAAGGAUA..GUAGU.-CAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012694_L1_11678_11747_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_013753_L1_11677_11746_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAC--UUGGUGCCACUCCAAAUAAAAGUA NC_008830_L1_12972_13041_p ACUUUUAAAGGAUA..ACAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_000845_L1_12865_12934_p ACUUUUAAAGGAUA..ACAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012095_L1_11689_11758_p ACUUUUAAAGGAUA..ACAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012103_L1_11687_11756_p ACUUUUAAAGGAUA..GCAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUAAAAGUA NC_009628_L1_11685_11754_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009849_L1_11683_11752_p ACUUUUAAAGGAUA..GAAGG.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_009629_L1_11684_11753_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012102_L1_11685_11754_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011822_L1_11685_11754_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002504_L1_11676_11745_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_013558_L1_11685_11754_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002612_L1_11697_11766_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_007393_L1_11699_11768_p ACUUUUAAAGGAUA..GUAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006925_L1_11693_11762_p ACUUUUAAAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002009_L1_11676_11745_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_011304_L1_11695_11764_p ACUUUUAAAGGAUA..GUAGU.-UAUCCCUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005433_L1_11696_11765_p ACUUUUAAAGGAUG..GUAGU.-UAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005434_L1_11696_11765_p ACUUUUAAAGGAUA..GUAGU.-UAUCCGUUGGCCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_002626_L1_11677_11746_p ACUUUUAAAGGAUA..GAAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUU NC_005436_L1_11688_11757_p GCUUUUAAAGGAUA..GAAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUU NC_002808_L1_11710_11781_p ACUUUAAUAGGAUA..GAAGC.UAAUCCAUUGGUCUUAGGAGCCAAAAAC-UUUGGUGCAAAUCCAAAUAAAAGUA NC_006893_L1_11693_11762_p ACUUUUAAAGGAUA..GGAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_003040_L1_11727_11796_p ACUUUUAAAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_005435_L1_11704_11773_p ACUUUUAAAGGAUG..GUAGU.-UAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_008156_L1_11738_11807_p ACUUUUAUAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAU--UUGGUGCAACUCCAAAUAAAAGUA NC_005035_L1_11731_11800_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUAAAAGUA NC_002391_L1_11710_11779_p ACUUUUAUAGGAUA..GUAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC--UUGGUGCAACUCCAAAUAAAAGUA NC_005034_L1_11728_11797_p ACUUUUAUAGGAUA..GAAGU.-AAUCCGUUGGUCUUAGGAACCAAAAAU--UUGGUGCAACUCCAAAUAAAAGUA NC_001788_L1_11710_11779_p ACUUUUAAAGGAUA..GGAGC.-UAUCCGUUGGUCUUAGGAGCCAAAAAA--UUGGUGCAACUCCAAGUAAAAGUA NC_001640_L1_11713_11782_p ACUUUUAAAGGAUA..GGAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001808_L1_11701_11770_p ACUUUUAAAGGAUG..GUAGU.-UAUCCGUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012681_L1_11702_11771_p ACUUUUAAAGGAUA..GAAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012684_L1_11702_11771_p ACUUUUAAAGGAUA..GGAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012682_L1_11705_11774_p ACUUUUAAAGGAUA..ACAGU.-UAUCCGUUGGUCUUAGGAAUCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_012683_L1_11698_11767_p ACUUUUAAAGGAUG..GGAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_001779_L1_11703_11772_p ACUUUUAAAGGAUA..GGAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_004027_L1_11653_11722_p ACUUUUAAAGGAUA..AAAGU.-UAUCCGUUGGUCUUAGGAACCAAAAAA--UUGGUGCAACUCCAAAUAAAAGUA NC_006923_L1_11713_11784_p ACUUUUAUAGGACAgaUUAGC.-CGUCCGUUGGUCUUAGGAACCAAAAAC--CUGGUGCAACUCCAGAUAAAAGUA NC_001821_L1_11698_11767_p ACUUUUAUAGGAUA..ACAGU.-AAUCCACUGGUCUUAGGAACCAGAAAC--UUGGUGCAAAUCCAAAUAAAAGUA NC_006924_L1_11705_11774_p ACUUUCAUAGGAUA..AAAGC.-AAUCCAUUGGUCUUAGGAACCAAAAAA--CUGGUGCAACUCCAGAUGAAAGUA NC_004032_L1_11675_11744_p ACUUUUAUAGGAUA..AAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAU--UUGGUGCAACUCCAAAUAAAAGUA NC_007630_L1_11758_11828_p ACUUUUAAAGGAUG..GUAGU.-UAUCCAUUGGCCUUAGGAACCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_006523_L1_11747_11817_p ACUUUUAAAGGAUA..ACAGU.-CAUCCGUUGGUCUUAGGUACCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_007631_L1_11771_11841_p ACUUUUAAAGGAUA..AUAGU.-CAUCCAUUGGUCUUAGGAACCAAAAAU-UUUGGUGCAAUUCCAAAUAAAAGUA NC_006517_L1_11764_11834_p ACUUUUAAAGGAUA..AUAGU.-CAUCCAUUGGUCUUAGGAACCAAAAAU-UUUGGUGCAAUUCCAAAUAAAAGUA NC_011949_L1_11891_11961_p GCUUUUAAAGGAUA..AUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_011944_L1_12650_12720_p ACUUUUAAAGGAUA..ACAGC.-CAUCCAUUGGUCUUAGGAAUCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_001610_L1_11733_11803_p ACUUUUAAAGGAUA..GCAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_006299_L1_11742_11812_p ACUUUUAAAGGAUA..AAAGC.-UAUCCGUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUGAAAGUA NC_008145_L1_11703_11773_p ACUUUUAAAGGAUA..CUAGC.-AAUCCAUUGGUCUUAGGAACCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_008136_L1_11719_11789_p ACUUUUAAAGGAUA..GAAGC.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_008447_L1_11700_11770_p ACUUUUAAAGGAUA..GAAGC.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_001794_L1_11732_11802_p ACUUUUAAAGGAUA..GAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_008134_L1_11726_11796_p ACUUUUAAAGGAUA..ACAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAC-UUUGGUGCAAUUCCAAAUAAAAGUA NC_008135_L1_11724_11794_p ACUUUUAAAGGAUA..GUAGA.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAAAUCCAAAUAAAAGUA NC_003039_L1_11702_11772_p ACUUUUAAAGGAUA..ACAGU.-AAUCCAUUGGUCUUAGGAAUCAAAAAU-UUUGGUGCAAUUCCAAAUAAAAGUA NC_008133_L1_11717_11788_p ACUUUUAAAGGAUU..AUUAG.UCAUCCACUGGUCUUAGGAACCAAAAAC-UUUGGUGCAAUUCCAAAUAAAAGUA NC_006524_L1_11723_11793_p ACUUUUAAAGGAUA..AGAGA.-AAUCCAUUGGUCUUAGGAACCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_006518_L1_11710_11780_p ACUUUUAAAGGAUA..AUAGA.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAAAUCCAAAUAAAAGUA NC_003322_L1_11722_11792_p ACUUUUAAAGGAUA..ACAGA.-AAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAAUUCCAAAUAAAAGUA NC_005828_L1_11700_11770_p ACUUUUAAAGGAUA..AUAGC.-UAUCCAUUGGUCUUAGGAAUCAAAAAU-UUUGGUGCAAUUCCAAAUAAAAGUA NC_005829_L1_11706_11776_p ACUUUUAAAGGAUA..GUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_002746_L1_11712_11782_p ACUUUUAAAGGAUA..AUAGU.-UAUCCAUUGGUCUUAGGAACCAAAAAC-UUUGGUGCAACUCCAAAUAAAAGUA NC_007632_L1_11740_11810_p ACUUUUAAAGGAUA..AAAGU.-AAUCCAUUGGUCUUAGGAACCAAAAAU-UUUGGUGCAACUCCAAAUAAAAGUA NC_000891_L1_11732_11802_p ACUUUUAAAGGAUA..AAAGU.-CUUCCAUUGACCUUAGGAGUCAAAAGC-UUUGGUGCAAUUCCAAAUAAAAGUA NC_006364_L1_11730_11800_p ACUUUUAAAGGAUA..AAAGU.-CUUCCAUUGACCUUAGGAGUCAAAAAC-UUUGGUGCAAUUCCAAAUAAAAGUA #=GC SS_cons (((((((,,<<<<_.._____.__>>>>,<<<<<_______>>>>>,,,,,<<<<<_______>>>>>))))))): #=GC RF gcuucuAAAGGAuA..AuAGC.uaaUCCauuGGuCUUAGGAaCCaaaaAuuCuuGGUGCAAaUCCaaGUagaagca #=GC SN 0000000..1111...........1111.22222.......22222.....33333.......333330000000. #=GF CS 76 columns, 21 paired, 14 covariant; 4 stems //