# STOCKHOLM 1.0 BACTERIAL Gly #=GC CS .223445..3233..........3323.64322.......22346.....4422.........2244544322..... #=GC BP +++++++..++++..........++++.+++++.......+++++.....+++++.......++++++++++++.... tdbD5590|Acinetobacter_sp._ADP1|62977|Gly|GCC GCGGGAATAGCTCAGTT-GGT-AGAGCACAACCTTGCCAAGGTTGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCA tdbD5261|Agrobacterium_tumefaciens_str._C58|176299|Gly|CCC GCGGGTGTAGCTCAAT--GGT-AGAGCAGCAGCTTCCCAAGCTGAATA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5218|Aquifex_aeolicus_VF5|224324|Gly|TCC GCGGGCGTAGCTCAGTT-GGT-AGAGCAGCGGCCTTCCAAGCCGCAGGTCGCGGGTTCGAGTCCCGTCGCCCGCTCCA tdbD843|Azorhizobium_caulinodans|7|Gly|GCC GCGGGTGTAGCTCAGG--GGT-AGAGCACAACCTTGCCAAGGTTGGGGTCGAGGGTTCGAATCCCTTCGCCCGCTCCA tdbD5592|Bacillus_anthracis_str._A2012|191218|Gly|GCC GCGGAAGTAGTTCAGT--GGT-AGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCA tdbD5505|Bacillus_anthracis_str._Ames|198094|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACAAGAGCCTTCCAAGCTCTGGT-CGAGAGTTCGATTCTCTTCACCCGCT--- tdbD5534|Bacillus_anthracis_str._Sterne|260799|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACAAGAGCCTTCCAAGCTCTGGT-CGAGAGTTCGATTCTCTTCACCCGCT--- tdbD5569|Bacillus_cereus_ATCC_10987|222523|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACAAGAGCCTTCCAAGCTCTGGT-CGAGAGTTCGATTCTCTTCACCCGCT--- tdbD5476|Bacillus_cereus_ATCC_14579|226900|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACAAGAGCCTTCCAAGCTCTGGT-CGAGAGTTCGATTCTCTTCACCCGCT--- tdbD5437|Bacillus_halodurans_C-125|272558|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACCTCAGCCTTCCAAGCTGATGT-CGTGGGTTCGATTCCCATCACCCGCT--- tdbD5146|Bacillus_subtilis_subsp._subtilis_str._168|224308|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACCTCAGCCTTCCAAGCTGATGT-CGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5596|Bacillus_thuringiensis_serovar_konkukian_str._97-27|281309|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACAAGAGCCTTCCAAGCTCTGGT-CGAGAGTTCGATTCTCTTCACCCGCT--- tdbD5498|Bacteroides_thetaiotaomicron_VPI-5482|226186|Gly|GCC GCGGAAATAGCTCAGTT-GGT-AGAGCATAACCTTGCCAAGGTTAGGGTCGCGAGTTCGAGTCTCGTTTTCCGCT--- tdbD5508|Bartonella_henselae_str._Houston-1|283166|Gly|TCC GCGGGTATAGCTCAAT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-TGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5602|Bartonella_quintana_str._Toulouse|283165|Gly|TCC GCGGGTATAGCTCAAT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-TGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5511|Bdellovibrio_bacteriovorus_HD100|264462|Gly|TCC GCGGGAATAGCTCAATT-GGCTAGAGTATCTGCCTTCCAAGCAGAGGGTTGCGGGTTCGAGACCCGTTTCCCGCTCCA tdbD5408|Bifidobacterium_longum_NCC2705|206672|Gly|GCC GCGGACATAGCTTAGTT-GGT-AAAGCGCAACCTTGCCAAGGTTGAGACCGCGGGTTCGAGTCCCGTTGTCCGCT--- tdbD5185|Borrelia_burgdorferi_B31|224326|Gly|GCC GCGAAAGTAACTCAGG--GGT-AGAGTGTCACCTTGCCAAGGTGGAAGTCGCGGGTTCAAATCCCGTCTTTCGCT--- tdbD5538|Borrelia_garinii_PBi|290434|Gly|GCC GCGAAAGTAACTCAGG--GGT-AGAGTGTCACCTTGCCAAGGTGGAAGTCGCGGGTTCAAATCCCGTCTTTCGCT--- tdbD5441|Bradyrhizobium_japonicum_USDA_110|224911|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGGCAGCTTCCCAAGCTGCATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5241|Brucella_melitensis_16M|224914|Gly|TCC GCGGGTATAGCTCAAT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-CGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5412|Brucella_suis_1330|204722|Gly|TCC GCGGGTATAGCTCAAT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-CGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5148|Buchnera_aphidicola_str._APS_(Acyrthosiphon_pisum)|107806|Gly|TCC GCGGACATCGTATAAT--GGCTATTACCTCAGCCTTCCAAGCTGATGA-CGCGGGTTCAATTCCCGCTGTCCGCT--- tdbD5479|Buchnera_aphidicola_str._Bp_(Baizongia_pistaciae)|224915|Gly|GCC GCGGGAATAGCTCAGTT-GGT-AGAGTACAACCTTGCCAAGGTTGGGGTCGCGAGTTCAAATCTCGTTTCCCGCT--- tdbD5367|Buchnera_aphidicola_str._Sg_(Schizaphis_graminum)|198804|Gly|TCC GCGGACATCGTATAAT--GGCTATTACCTCAGCCTTCCAAGCTGATGA-TGCGGGTTCAATTCCCGCTGCCCGCT--- tdbD5188|Campylobacter_jejuni_subsp._jejuni_NCTC_11168|192222|Gly|TCC GCGGGAGTAGCTCAGTT-GGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAGTCCCGTTTCCCGCTCCA tdbD5603|Candidatus_Blochmannia_floridanus|203907|Gly|GCC GCGGGAATAGCTCAGAT-GGTTAGAGTGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAATCTCGTTTCCCGCT--- tdbD5520|Candidatus_Protochlamydia_amoebophila_UWE25|264201|Gly|TCC GCGCCTGTAGTTCAAT--GGT-AGAACAGTAGCCTTCCAAGCTACGAG-TGTCAGTTCGATTCTGATCAGGCGCT--- tdbD5189|Caulobacter_crescentus_CB15|190650|Gly|CCC GCGGGCGTAGTTCAGA--GGT-AGAACGTCAGCTTCCCAAGCTGAATGTCGGGGGTTCGATTCCCCCCGCCCGCTCCA tdbD5230|Chlamydia_muridarum_Nigg|243161|Gly|TCC GCGCCCGTAGCTCAAT--GGT-AGAGCTGTAGCCTTCCAAGCTACCGG-TGTCAGTTCGATTCTGATCGGGCGCT--- tdbD5141|Chlamydia_trachomatis_D/UW-3/CX|272561|Gly|TCC GCGCCCGTAGCTCAAT--GGT-AGAGCTGTAGCCTTCCAAGCTACCGG-TGTCAGTTCGATTCTGATCGGGCGCT--- tdbD5137|Chlamydophila_pneumoniae_AR39|115711|Gly|TCC GCGCCCGTAGCTCAAT--GGT-AGAGCTGTAGCCTTCCAAGCTACCGG-TGTCAGTTCGATTCTGATCGGGCGCT--- tdbD5139|Chlamydophila_pneumoniae_CWL029|115713|Gly|TCC GCGCCCGTAGCTCAAT--GGT-AGAGCTGTAGCCTTCCAAGCTACCGG-TGTCAGTTCGATTCTGATCGGGCGCT--- tdbD5168|Chlamydophila_pneumoniae_J138|138677|Gly|TCC GCGCCCGTAGCTCAAT--GGT-AGAGCTGTAGCCTTCCAAGCTACCGG-TGTCAGTTCGATTCTGATCGGGCGCT--- tdbD5359|Chlorobium_tepidum_TLS|194439|Gly|CCC GCGGGTGTAACTCAGTT-GGT-AGAGTGTTTGCTTCCCAAGCAAAATGTCGCGAGTTCGAATCTCGTCACCCGCT--- tdbD5237|Clostridium_acetobutylicum_ATCC_824|272562|Gly|TCC GCGGGTGTAACTCAAT--GGT-AGAGTGCTAGCCTTCCAAGCTAGTTA-CGAGGGTTCGATTCCCTCTACCCGCTCCA tdbD5227|Clostridium_perfringens_str._13|195102|Gly|TCC GCGGGTGTAGTTCAAT--GGT-AGAACACCAGCCTTCCAAGCTGGATA-CCCGGGTTCGATTCCCGGTACCCGCTCCA tdbD5444|Clostridium_tetani_E88|212717|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGTTCCAGCCTTCCAAGCTGGCTG-TGAGAGTTCGATTCTCTTCACCCGCTCCA tdbD5512|Corynebacterium_diphtheriae_NCTC_13129|257309|Gly|GCC GCGGATGTAGCGCAGTT-GGT-AGCGCATCACCTTGCCAAGGTGAGGGTCGCGAGTTCGAGTCTCGTCATCCGCT--- tdbD5413|Corynebacterium_efficiens_YS-314|196164|Gly|GCC GCGGATGTAGCGCAGTT-GGT-AGCGCATCACCTTGCCAAGGTGAGGGTCGCGAGTTCGAGTCTCGTCATCCGCT--- tdbD5372|Corynebacterium_glutamicum_ATCC_13032|196627|Gly|GCC GCGGATGTAGCGCAGTT-GGT-AGCGCATCACCTTGCCAAGGTGAGGGTCGCGAGTTCGAGTCTCGTCATCCGCT--- tdbD5472|Coxiella_burnetii_RSA_493|227377|Gly|CCC GCGGGTGTAGTTCAAT--GGT-AGAACATAAGCTTCCCAAGCTTAGAA-CGTGGGTTCGATTCCCATCACCCGCT--- tdbD5192|Deinococcus_radiodurans_R1|243230|Gly|CCC GCGGGAATAGCTCAGTT-GGT-AGAGCGTCAGCTTCCCAAGCTGAATGTCGCGAGTTCGAGTCTCGTTTCCCGCT--- tdbD5573|Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough|882|Gly|CCC GCGGGAATAACTCAGC--GGT-AGAGTGTCAGCTTCCCAAGCTGAAGGTCGCGGGTTCAAATCCCGTTTCCCGCTCCA tdbD5446|Enterococcus_faecalis_V583|226185|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACCACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5481|Escherichia_coli_CFT073|199310|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5169|Escherichia_coli_K12|83333|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5172|Escherichia_coli_O157:H7|83334|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5175|Escherichia_coli_O157:H7_EDL933|155864|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5361|Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586|190304|Gly|TCC GCGGGAATAGCTCAGTT-GGT-AGAGCGTCAGCCTTCCAAGCTGAATGTCGCGAGTTCGAACCTCGTTTCCCGCTCCA tdbD5540|Geobacter_sulfurreducens_PCA|243231|Gly|CCC GCGGGAATAACTCAGT--GGT-AGAGTGTCAGCTTCCCAAGCTGAAGGTCGCGGGTTCGAATCCCGTTTCCCGCTCCA tdbD5182|Haemophilus_influenzae_Rd_KW20|71421|Gly|GCC GCGGGAATAGCTCAGTT-GGT-AGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCA tdbD5179|Helicobacter_pylori_26695|85962|Gly|TCC GCGGGAATAGCTCAGTT-GGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAGTCCCGTTTCCCGCTCCA tdbD5181|Helicobacter_pylori_J99|85963|Gly|TCC GCGGGAATAGCTCAGTT-GGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAGTCCCGTTTCCCGCTCCA tdbD826|Lactobacillus_delbrueckii_subsp._bulgaricus|1585|Gly|GCC GCGGAAGTAGTTCAGT--GGT-AGAACATCACCTTGCCATGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCT--- tdbD5545|Lactobacillus_johnsonii_NCC_533|257314|Gly|GCC GCGGAAGTAGTTCAGT--GGT-AGAACACCACCTTGCCATGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCT--- tdbD5447|Lactobacillus_plantarum_WCFS1|220668|Gly|TCC GCGAGTGTAGTTTAGT--GGT-AAAACGACAGCCTTCCAAGCTGTAGT-CGCGGGTCCGATTCCCGTCACTCGCT--- tdbD829|Lactococcus_lactis|1358|Gly|TCC GCGGATGTAGTTTAAT--GGT-AGAACCCCAGCCTTCCAAGCTGGCTA-CGCGAGTTCGATTCTCGTCATCCGCT--- tdbD5546|Leifsonia_xyli_subsp._xyli_str._CTCB07|281090|Gly|TCC GGGGATGTAGCTCAAT--GGT-AGAGCCTCAGTCTTCCAAACTGATTA-CGCGGGTTCGATTCCCGTCATCCCCT--- tdbD5416|Leptospira_interrogans_serovar_Lai_str._56601|189518|Gly|GCC GCGGGAATAGCTCAGT--GGT-AGAGCACCTCCTTGCCAAGGAGGGGGTCGCGGGTTCGAATCCCGTTTCCCGCT--- tdbD5220|Listeria_innocua_Clip11262|272626|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGTGGGTTCGATTCCCATCACCCGCT--- tdbD5224|Listeria_monocytogenes_EGD-e|169963|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGTGGGTTCGATTCCCATCACCCGCT--- tdbD5576|Listeria_monocytogenes_str._4b_F2365|265669|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGTGGGTTCGATTCCCATCACCCGCT--- tdbD5578|Mesoplasma_florum_L1|265311|Gly|TCC GCAGGTGTAGTTTAAT--GGT-AGAACTTCAGCCTTCCAAGCTGACTG-TGAGGGTTCGATTCCCTTCACCTGCTCCA tdbD5244|Mesorhizobium_loti_MAFF303099|266835|Gly|TCC GCGGGTATAGCTCAGT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-TGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5467|Mycobacterium_bovis_AF2122/97|233413|Gly|TCC GCGGGCGTAGCTCAAT--GGT-AGAGCCCTAGTCTTCCAAACTAGCGA-CGCGGGTTCGATTCCCGTCGCCCGCT--- tdbD5163|Mycobacterium_leprae_TN|272631|Gly|GCC GCGGATGTAGCGCAGTT-GGT-AGCGCATCACCTTGCCAAGGTGAGGGTCGCGGGTTCGAATCCCGTCATCCGCT--- tdbD5151|Mycobacterium_tuberculosis_CDC1551|83331|Gly|TCC GCGGGCGTAGCTCAAT--GGT-AGAGCCCTAGTCTTCCAAACTAGCGA-CGCGGGTTCGATTCCCGTCGCCCGCT--- tdbD5518|Mycobacterium_tuberculosis_H37Rv|83332|Gly|TCC GCGGGCGTAGCTCAAT--GGT-AGAGCCCTAGTCTTCCAAACTAGCGA-CGCGGGTTCGATTCCCGTCGCCCGCT--- tdbD809|Mycoplasma_capricolum|2095|Gly|TCC GCAGGTGTAGTTGAAT--GGT-AGAACTTCAGCCTTCCAAGCTGATTG-TGAGGGTTCGATTCCCTTCACCTGCTCCA tdbD5464|Mycoplasma_gallisepticum_R|233150|Gly|TCC GCGGGTGTAGTTCAAT--GGT-AGAACTGCAGCCTTCCAAGCTGTTAA-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5195|Mycoplasma_genitalium_G37|243273|Gly|GCC GCAGATATAGTTCAAT--GGT-AGAACATAACCTTGCCAAGGTTAAGA-TGCGGGTTCGATTCCCGTTATCTGCTCCA tdbD812|Mycoplasma_mycoides|2102|Gly|TCC GCAGGTGTAGTTTAAT--GGC-AGAACTTCAGCCTTCCAAGCTGATTG-TGAGGGTTCGATTCCCTTCACCTGCTCCA tdbD5197|Mycoplasma_pneumoniae_M129|272634|Gly|GCC GCAGATATAGTTCAAT--GGC-AGAACATAACCTTGCCAAGGTTAAGA-TGCGGGTTCGATTCCCGTTATCTGCTCCA tdbD5260|Mycoplasma_pulmonis_UAB_CTIP|272635|Gly|TCC GCAAGTGTAGTTTAAT--GGT-AGAACTTCAGCCTTCCAAGCTGATTG-TGAGGGTTCGATTCCCTTCACTTGCTCCA tdbD5153|Neisseria_meningitidis_MC58|122586|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGCAGAAGCCTTCCAAGCTTACGG-TGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5155|Neisseria_meningitidis_Z2491|122587|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGCAGAAGCCTTCCAAGCTTACGG-TGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5496|Nitrosomonas_europaea_ATCC_19718|228410|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGCAGAAGCCTTCCAAGCTTACGA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5258|Nostoc_sp._PCC_7120|103690|Gly|TCC GCGGGCGTAGTTTAGT--GGT-AAAACTATAGCCTTCCAAGCTATTAA-TGCGGGTTCGATTCCCGCCGCCCGCT--- tdbD5418|Oceanobacillus_iheyensis_HTE831|221109|Gly|TCC GCGGGTGTAGTTTAAT--GGT-AAAACCTCAGCCTTCCAAGCTGATGA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5515|Onion_yellows_phytoplasma_OY-M|262768|Gly|TCC GCGGGCGTCGTATAAT--GGCCATTACCTTAGCCTTCCAAGCTAAAGA-CGTGGGTTCGATTCCCATCGCCCGCTCCA tdbD5200|Pasteurella_multocida_subsp._multocida_str._Pm70|272843|Gly|TCC GCGGGCATCGTATAAT--GGCTATTACCTCAGCCTTCCAAGCTGATGA-TGCGGGTTCGATTCCCGCTGCCCGCTCCA tdbD5523|Photorhabdus_luminescens_subsp._laumondii_TTO1|243265|Gly|CCC GCGAGCGTAGTTCAAT--GGC-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCTCGCTCCA tdbD5550|Porphyromonas_gingivalis_W83|242619|Gly|GCC GCGGAAGTAGCTCAGTT-GGT-AGAGCATAACCTTGCCAAGGTTAGGGTCGCGGGTTCGAGTCCCGTCTTCCGCT--- tdbD5579|Propionibacterium_acnes_KPA171202|267747|Gly|GCC GCGGACGTGGCTCAGTT-GGT-AGAGCATCACCTTGCCAAGGTGAGGGTCGCGGGTTCGAGTCCCGTCGTCCGCT--- tdbD5205|Pseudomonas_aeruginosa_PAO1|208964|Gly|TCC GCGGGTATAGTTCAGT--GGT-AGAACCTCAGCCTTCCAAGCTGATGA-TGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD847|Pseudomonas_putida|303|Gly|GCC GCGGGAATAGCTCAGTT-GGT-AGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCA tdbD5501|Pseudomonas_syringae_pv._tomato_str._DC3000|223283|Gly|TCC GCGGGTATAGTTTAGT--GGT-AGAACCTCAGCCTTCCAAGCTGATGA-TGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5255|Ralstonia_solanacearum_GMI1000|267608|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGCAGAAGCCTTCCAAGCTTACGA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5492|Rhodopirellula_baltica_SH_1|243090|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-CGAGGGTTCGATTCCCTTCACCCGCT--- tdbD5528|Rhodopseudomonas_palustris_CGA009|258594|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGGCAGCTTCCCAAGCTGCATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5240|Rickettsia_conorii_str._Malish_7|272944|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGTTCCAGCCTTCCAAGCTGGCTG-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5370|Rickettsia_prowazekii_str._Madrid_E|272947|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGTTCCAGCCTTCCAAGCTGGCTG-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5554|Rickettsia_typhi_str._Wilmington|257363|Gly|TCC GCGGGTGTAACTCAAT--GGT-AGAGTTCCAGCCTTCCAAGCTGGCTG-TGTGGGTTCGATTCCCATCATCCGCTCCA tdbD5266|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|220341|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5488|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|209261|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5251|Salmonella_typhimurium_LT2|99287|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5424|Shewanella_oneidensis_MR-1|211586|Gly|GCC GCGACATTAGCTCAGTT-GGT-AGAGCGATACCTTGCCAAGGTATAGGTCATCGGTTCGAACCCGATATGTCGCTCCA tdbD5427|Shigella_flexneri_2a_str._301|198214|Gly|CCC GCGGGCGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCGCCCGCTCCA tdbD5269|Sinorhizobium_meliloti_1021|266834|Gly|TCC GCGGGTATAGCTCAAT--GGT-AGAGCAGCAGCCTTCCAAGCTGAATA-CGCGGGTTCGATTCCCGCTACCCGCTCCA tdbD5530|Staphylococcus_aureus_subsp._aureus_MRSA252|282458|Gly|TCC GCGGGTGTAGTTTAAT--GGC-AAAACCTCAGCCTTCCAAGCTGATGT-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5376|Staphylococcus_aureus_subsp._aureus_MW2|196620|Gly|TCC GCGGGTGTAGTTTAAT--GGC-AAAACCTCAGCCTTCCAAGCTGATGT-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5160|Staphylococcus_aureus_subsp._aureus_N315|158879|Gly|TCC GCGGGTGTAGTTTAAT--GGC-AAAACCTCAGCCTTCCAAGCTGATGT-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5455|Staphylococcus_epidermidis_ATCC_12228|176280|Gly|GCC GCGGAAGTAGTTCAGT--GGT-AGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCA tdbD836|Stigmatella_aurantiaca|41|Gly|TCC GCGGGAATAGCTCAGTT-GGT-AGAGCGTCAGCCTTCCAAGCTGAATGTCGTGGGTTCGAGTCCCATTTCCCGCTCCA tdbD5431|Streptococcus_agalactiae_2603V/R|208435|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5380|Streptococcus_agalactiae_NEM316|211110|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5435|Streptococcus_mutans_UA159|210007|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5235|Streptococcus_pneumoniae_TIGR4|170187|Gly|GCC GCGAACGTAGTTCAGT--GGT-AGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCGTTCGCT--- tdbD5233|Streptococcus_pyogenes_M1_GAS|160490|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5382|Streptococcus_pyogenes_MGAS315|198466|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5470|Streptococcus_pyogenes_SSI-1|193567|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACTACAGCCTTCCAAGCTGTTGT-CGCGAGTTCGATTCTCGTCACCCGCT--- tdbD5486|Streptomyces_avermitilis_MA-4680|227882|Gly|GCC GCGGACGTAGCTCAGTT-GGT-AGAGCGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAGCCTCGTCGTCCGCT--- tdbD5423|Streptomyces_coelicolor_A3(2)|100226|Gly|TCC GCGGGCGTAGCTCAAT--GGT-AGAGCACCAGTCTTCCAAACTGGCTA-CGCGGGTTCGATTCCCGTCGCCCGCT--- tdbD820|Streptomyces_lividans|1916|Gly|GCC GCGGACGTAGCTCAGTT-GGT-AGAGCGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAGCCTCGTCGTCCGCT--- tdbD5557|Symbiobacterium_thermophilum_IAM_14863|292459|Gly|CCC GCGGGTGTAGTTCAAT--GGT-AGAACGTCAGCTTCCCAAGCTGAAGA-CGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5208|Synechocystis_sp._PCC_6803|1148|Gly|TCC GCGGGTGTAGTTTAGT--GGT-AAAACCTTAGCCTTCCAAGCTAATGA-TAGGGGTTCGATTCCCCTCACCCGCT--- tdbD5391|Thermoanaerobacter_tengcongensis_MB4|273068|Gly|TCC GCGGGTGTAGCTCAAT--GGT-AGAGCCCCAGCCTTCCAAGCTGGTTG-CGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5383|Thermosynechococcus_elongatus_BP-1|197221|Gly|TCC GCGGGCATGGTTTAAT--GGT-AAAACCCTAGCCTTCCAAGCTAGAGA-CGCGGGTTCGATTCCCGCTGCCCGCT--- tdbD5210|Thermotoga_maritima_MSB8|243274|Gly|GCC GCGGGTGTAGCTCAGT--GGT-AGAGCACCAGCTTGCCAAGCTGGGGGTCGCGGGTTCGAATCCCGTCGCCCGCTCCA tdbD5582|Thermus_thermophilus_HB27|262724|Gly|TCC GCGGGAGTAGCTCAGCTTGGT-AGAGCATCGGCCTTCCAAGCCGAGGGTCGCGGGTTCGAATCCCGTCTCCCGCTCCA tdbD5586|Treponema_denticola_ATCC_35405|243275|Gly|GCC GCGGGAATAGCTCAGT--GGT-AGAGCGCCACCTTGCCAAGGTGGATGTCGCGAGTTCAATCCTCGTTTCCCGCT--- tdbD5201|Treponema_pallidum_subsp._pallidum_str._Nichols|243276|Gly|GCC GCGGGAATAGCTCAGT--GGT-AGAGCGCCACCTTGCCAAGGTGGAAGTCGCGGGTTCGATCCCCGTTTCCCGCT--- tdbD5457|Tropheryma_whipplei_str._Twist|203267|Gly|CCC GCGAGTGTAGTTCAAT--GGC-AGAACTTCAGCTTCCCAAGCTGACGG-CGCGGGTTCGATTCCCGTCACTCGCT--- tdbD5458|Tropheryma_whipplei_TW08/27|218496|Gly|TCC GGGGGTGTAGCTCAGT--GGT-AGAGTTCCAGTCTTCCAAACTGGTGG-CGCGGGTTCGATTCCCGTCACCCCCT--- tdbD5166|Ureaplasma_parvum_serovar_3|38504|Gly|TCC GCGGGTGTAGTTCAAT--GGT-AGAACTATAGCCTTCCAAGCTATTAG-TGTGGGTTCGATTCCCATCACCCGCTCCA tdbD5156|Vibrio_cholerae_O1_biovar_El_Tor_str._N16961|243277|Gly|GCC GCGACACTAGCTCAGTT-GGT-AGAGCGCAACCTTGCCAAGGTTGAGGTCACGAGTTCGAACCTCGTGTGTCGCTCCA tdbD5588|Wolbachia_endosymbiont_of_Drosophila_melanogaster|163164|Gly|TCC GCGGGTATAGCTCAAT--GGT-AGAGCTCTAGCCTTCCAAGCTAGTGA-CGTGGGTTCAATTCCCACTATCCGCT--- tdbD5395|Xanthomonas_axonopodis_pv._citri_str._306|190486|Gly|TCC GCGGGAGTAGTTCAAC--GGT-AGAACCTCAGCCTTCCAAGCTGATGG-TGCGGGTTCGATTCCCGTCTCCCGCTCCA tdbD5392|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|190485|Gly|TCC GCGGGAGTAGTTCAAC--GGT-AGAACCTCAGCCTTCCAAGCTGATGG-TGCGGGTTCGATTCCCGTCTCCCGCTCCA tdbD5215|Xylella_fastidiosa_9a5c|160492|Gly|TCC GCGGGAGTAGTTCAAA--GGT-AGAACCTCAGCCTTCCAAGCTGATGG-TGCGGGTTCGATTCCCGTCTCCCGCTCCA tdbD5463|Xylella_fastidiosa_Temecula1|183190|Gly|TCC GCGGGAGTAGTTCAAA--GGT-AGAACCTCAGCCTTCCAAGCTGATGG-TGCGGGTTCGATTCCCGTCTCCCGCTCCA tdbD5561|Yersinia_pestis_biovar_Microtus_str._91001|229193|Gly|CCC GCGGGTGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5248|Yersinia_pestis_CO92|214092|Gly|CCC GCGGGTGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5403|Yersinia_pestis_KIM|187410|Gly|CCC GCGGGTGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCACCCGCTCCA tdbD5564|Yersinia_pseudotuberculosis_IP_32953|273123|Gly|CCC GCGGGTGTAGTTCAAT--GGT-AGAACGAGAGCTTCCCAAGCTCTATA-CGAGGGTTCGATTCCCTTCACCCGCTCCA #=GC SS_cons (((((((..((((..........)))).(((((.......))))).....(((((.......)))))))))))).... #=GC SN 0000000..1111..........1111.22222.......22222.....33333.......333330000000.... #=GF CS 78 columns, 21 paired, 19 covariant; 4 stems //