# STOCKHOLM 1.0 BACTERIAL Phe #=GC CS 2235663....................54434.......43445.....4642.........24643665322.... #=GC BP +++++++..++++.........++++.+++++.......+++++.....+++++.......++++++++++++.... tdbD676|Acholeplasma_laidlawii|2148|Phe|GAA GGCTCTGTAGCTCAGTCGGT-AGAGCAGTGGCCTGAAGAGCCTCGTCGTAG-GGTTCGATTCCGCTTGGAGCCACCA tdbD5105|Acinetobacter_sp._ADP1|62977|Phe|GAA GGCGCGATAGCTCAGTCGGT-AGAGCAACGGATTGAAAATCCGTGTGTCGGCAGTTCGATCCTGCCTCACGCCACCA tdbD4974|Agrobacterium_tumefaciens_str._C58|176299|Phe|GAA GCCCGGATAGCTCAGTTGGT-AGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCAAATCCGCCTCCGGGCACCA tdbD4956|Aquifex_aeolicus_VF5|224324|Phe|GAA GGCCCGGTAGCTCAGGTGGT-AGAGCACCCGGCTGAAAACCGGGGTGTCGGCGGTTCGACTCCGCCCTGGGCCACCA tdbD5107|Bacillus_anthracis_str._A2012|191218|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCCCGAGCCACCA tdbD5069|Bacillus_anthracis_str._Ames|198094|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5081|Bacillus_anthracis_str._Sterne|260799|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5097|Bacillus_cereus_ATCC_10987|222523|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5058|Bacillus_cereus_ATCC_14579|226900|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5041|Bacillus_halodurans_C-125|272558|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAATGGACTGAAAATCCATGTGTCGGCGGTTCGATTCCGTCCCGAGCCACCA tdbD4921|Bacillus_subtilis_subsp._subtilis_str._168|224308|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAACGGACTGAAAATCCGTGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5109|Bacillus_thuringiensis_serovar_konkukian_str._97-27|281309|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5065|Bacteroides_thetaiotaomicron_VPI-5482|226186|Phe|GAA GGTGCCATAGCTCAGTTGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCCCCGGTTCGATTCCTGGTGGCACCA--- tdbD5070|Bartonella_henselae_str._Houston-1|283166|Phe|GAA GCCCAGATAGCTCAGTTGGT-AGAGCAGCGGACTGAAAATCCGCGTGTCCGTGGTTCGAATCCGCGTCTGGGCACCA tdbD5112|Bartonella_quintana_str._Toulouse|283165|Phe|GAA GCCCAGATAGCTCAGTTGGT-AGAGCAGCGGACTGAAAATCCGCGTGTCCGTGGTTCGAATCCGCGTCTGGGCACCA tdbD5071|Bdellovibrio_bacteriovorus_HD100|264462|Phe|GAA GGCTTGGTAGCTCAGTTGGT-AGAGCAGAGGACTGAAAATCCTTGTGTCGGCGGTTCAATTCCGTCTCAAGCCACCA tdbD5032|Bifidobacterium_longum_NCC2705|206672|Phe|GAA GGCTCTGTAGCTCAGTTGGT-AGAGCGAGCGACTGAAAATCGCTAGGTCAACGGATCGACGCCGTTCGGAGCCACCA tdbD4943|Borrelia_burgdorferi_B31|224326|Phe|GAA GCTGCTGTAGCTCAGTTGGT-AGAGCATAGGACTGAAAATCCTTGTGTCAGGAGTTCGATTCTCCTCGGCAGCA--- tdbD5082|Borrelia_garinii_PBi|290434|Phe|GAA GCTGCTGTAGCTCAGTTGGT-AGAGCATAGGACTGAAAATCCTTGTGTCAGGAGTTCGATTCTCCTCGGCAGCA--- tdbD5042|Bradyrhizobium_japonicum_USDA_110|224911|Phe|GAA GCCCAGGTAGCTCAGTTGGT-AGAGCATGCGACTGAAAATCGCAGTGTCGGTGGTTCGATTCCGCCCCTGGGCACCA tdbD4965|Brucella_melitensis_16M|224914|Phe|GAA GCCCGGATAGCTCAGTTGGT-AGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCCGGGCACCA tdbD4924|Buchnera_aphidicola_str._APS_(Acyrthosiphon_pisum)|107806|Phe|GAA GCCCGGATAGCTCAGTTGGT-AGAGCAGGGGACTGAAAATCCCCGTGTCGGTGGTTCAATTCCGCCTCCGGGCA--- tdbD5059|Buchnera_aphidicola_str._Bp_(Baizongia_pistaciae)|224915|Phe|GAA GCCTGAATAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTTCAGGCA--- tdbD5017|Buchnera_aphidicola_str._Sg_(Schizaphis_graminum)|198804|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGACTGAAAATCCCCGTGTCGGTGGTTCAATTCCGCCTCCGGGCA--- tdbD4944|Campylobacter_jejuni_subsp._jejuni_NCTC_11168|192222|Phe|GAA GGTTGGATAGCTCAGTCGGT-AGAGCAGCAGACTGAAAATCTGCGTGTCGGCAGTTCGATTCTGCCTCTAACCACCA tdbD5113|Candidatus_Blochmannia_floridanus|203907|Phe|GAA GCCCAGATAGCTCAGTTGGT-AGAGCAGAGGACTGAAGATCCTCGTGTCCTTGGTTCGATTCCGAGTCTGGGCACCA tdbD5075|Candidatus_Protochlamydia_amoebophila_UWE25|264201|Phe|GAA GGCCAGATAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTTGTGTCGCTGGTTCGATTCCAGTTCTGGCCA--- tdbD4945|Caulobacter_crescentus_CB15|190650|Phe|GAA GCCTGGGTAGCTCAGTTGGT-AGAGCAGCGGATTGAAAATCCGCGTGTCGCTGGTTCGATTCCGGCCCCAGGCACCA tdbD4960|Chlamydia_muridarum_Nigg|243161|Phe|GAA GGCTAGATAGCTCAGCTGGT-AGAGCAGAGGACTGAAGATCCTTGTGTCGTCGGTTCGATCCCGGCTCTGGCCA--- tdbD4919|Chlamydia_trachomatis_D/UW-3/CX|272561|Phe|GAA GGCTAGATAGCTCAGCTGGT-AGAGCAGAGGACTGAAGATCCTTGTGTCGTCGGTTCGATCCCGGCTCTGGCCA--- tdbD4917|Chlamydophila_pneumoniae_AR39|115711|Phe|GAA GGCTAGATAGCTCAGATGGT-AGAGCAGAGGATTGAAGATCCTTGTGTCGTCGGTTCGATCCCGGCTCTGGCCA--- tdbD4918|Chlamydophila_pneumoniae_CWL029|115713|Phe|GAA GGCTAGATAGCTCAGATGGT-AGAGCAGAGGATTGAAGATCCTTGTGTCGTCGGTTCGATCCCGGCTCTGGCCA--- tdbD4933|Chlamydophila_pneumoniae_J138|138677|Phe|GAA GGCTAGATAGCTCAGATGGT-AGAGCAGAGGATTGAAGATCCTTGTGTCGTCGGTTCGATCCCGGCTCTGGCCA--- tdbD5014|Chlorobium_tepidum_TLS|194439|Phe|GAA GGACAGATAGCTCAGTTGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGGGGGTTCGATTCCCTCTCTGTCCACCA tdbD4963|Clostridium_acetobutylicum_ATCC_824|272562|Phe|GAA GGCCAGATAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCCCTGGTTCGATTCCTGGTCTGGCCACCA tdbD4959|Clostridium_perfringens_str._13|195102|Phe|GAA GGCTCGATAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGCTGGTTCGATTCCTGCTCGAGCCACCA tdbD5044|Clostridium_tetani_E88|212717|Phe|GAA GGCTCGATAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCCCTGGTTCGATTCCTGGTCGAGCCACCA tdbD5072|Corynebacterium_diphtheriae_NCTC_13129|257309|Phe|GAA GGCCAGATAGCTCAGTCGGT-AGAGCACACGCCTGAAAAGTGTGGGGTCGCCAGTTCGATCCTGGCTCTGGCCA--- tdbD5033|Corynebacterium_efficiens_YS-314|196164|Phe|GAA GGCCAGATAGCTCAGTCGGT-AGAGCGTTCGCCTGAAAAGTGAAAGGTCGCCGGTTCGATCCCGGCTCTGGCCA--- tdbD5019|Corynebacterium_glutamicum_ATCC_13032|196627|Phe|GAA -GCCAGATAGCTCAGTCGGT-AGAGCGTTCGCCTGAAAAGTGAAAGGTCGCCGGTTCGATCCCGGCTCTGGCCACCA tdbD5056|Coxiella_burnetii_RSA_493|227377|Phe|GAA GGCCAGATAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCAGTTCGATTCTGCCTCTGGCCACCA tdbD4946|Deinococcus_radiodurans_R1|243230|Phe|GAA GGCTAGGTAGCTCAGCTGGT-AGAGCAAACGACTGAAAATCGTTGGGTCGCCGGTTCAAGTCCGGCCCTGGCCACCA tdbD5098|Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough|882|Phe|GAA GCCGAGGTAGCTCAGTTGGT-AGAGCAGGGGACTGAAAATCCCCGTGTCGGGAGTTCAATTCTCTCCCTCGGCACCA tdbD5046|Enterococcus_faecalis_V583|226185|Phe|GAA GGCGTGGTAGCTCAGTTGGT-AGAGCAACGGATTGAAGCTCCGTGTGTCGGCAGTTCGACTCTGTCTCACGCCA--- tdbD5060|Escherichia_coli_CFT073|199310|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD4934|Escherichia_coli_K12|83333|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD4936|Escherichia_coli_O157:H7|83334|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD4938|Escherichia_coli_O157:H7_EDL933|155864|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD5015|Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586|190304|Phe|GAA GCCCAGATAGCTCAGTCGGT-AGAGCAGGGGACTGAAAATCCCCGTGTCGGTGGTTCGATTCCGCCTCTGGGCACCA tdbD5084|Geobacter_sulfurreducens_PCA|243231|Phe|GAA GCCCAGATAGCTCAGCTGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGGCGGTTCGATTCCGTCTCTGGGCACCA tdbD4941|Haemophilus_influenzae_Rd_KW20|71421|Phe|GAA GCCTCGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCA tdbD4939|Helicobacter_pylori_26695|85962|Phe|GAA GGCTTGATAGCTCAGTCGGT-AGAGCAGAAGACTGAAAATCTTCGTGTCGGTGGTTCGATTCCGCCTCAAGCCACCA tdbD4940|Helicobacter_pylori_J99|85963|Phe|GAA GGCTTGATAGCTCAGTCGGT-AGAGCAGAAGACTGAAAATCTTCGTGTCGGTGGTTCGATTCCGCCTCAAGCCACCA tdbD5086|Lactobacillus_johnsonii_NCC_533|257314|Phe|GAA GGCTCGATAGCTCAGTTGGT-AGAGCAAAGGATTGAAGCTCCTTGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5047|Lactobacillus_plantarum_WCFS1|220668|Phe|GAA GGCTCGGTAGCTCAGTCGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCCCGCGCCA--- tdbD683|Lactococcus_lactis|1358|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5087|Leifsonia_xyli_subsp._xyli_str._CTCB07|281090|Phe|GAA GGCTCTGTAGCTCAGTTGGT-AGAGCGTTCGACTGAAAATCGAAAGGTCACCGGATCGATGCCGGTCGGAGCCA--- tdbD5034|Leptospira_interrogans_serovar_Lai_str._56601|189518|Phe|GAA GGCCTTGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTTGTGTCGGGAGTTCGATTCTCTCCGAGGCCA--- tdbD4957|Listeria_innocua_Clip11262|272626|Phe|GAA GGCTTGGTAGCTCAGTTGGT-AGAGCACTTGATTGAAGCTCAAGGTGTCGGCAGTTCGATTCTGTCCCAAGCCA--- tdbD4958|Listeria_monocytogenes_EGD-e|169963|Phe|GAA GGCTTGGTAGCTCAGTTGGT-AGAGCACTTGATTGAAGCTCAAGGTGTCGGCAGTTCGATTCTGTCCCAAGCCA--- tdbD5099|Listeria_monocytogenes_str._4b_F2365|265669|Phe|GAA GGCTTGGTAGCTCAGTTGGT-AGAGCACTTGATTGAAGCTCAAGGTGTCGGCAGTTCGATTCTGTCCCAAGCCA--- tdbD5100|Mesoplasma_florum_L1|265311|Phe|GAA GGTTGTGTAGCTCAGTTGGT-AGAGCAGCAGATTGAAGCTCTGCGTGTCGGCGGTTCAATTCCGTCCACAACCACCA tdbD4966|Mesorhizobium_loti_MAFF303099|266835|Phe|GAA GCCCAGATAGCTCAGTTGGT-AGAGCAGCGGACTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCTGGGCACCA tdbD5054|Mycobacterium_bovis_AF2122/97|233413|Phe|GAA GGCCAGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTCGGCGGTTCGATCCCGCCCCTGGCCACCA tdbD4931|Mycobacterium_leprae_TN|272631|Phe|GAA GGCCAGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTCGGCGGTTCGATCCCGCCCCTGGCTA--- tdbD4925|Mycobacterium_tuberculosis_CDC1551|83331|Phe|GAA GGCCAGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTCGGCGGTTCGATCCCGCCCCTGGCCACCA tdbD5074|Mycobacterium_tuberculosis_H37Rv|83332|Phe|GAA GGCCAGGTAGCTCAGTCGGTATGAGCGTCCGCCTGAAAAGCGGAAGGTCGGCGGTTCGATCCCGCCCCTGGCCACCA tdbD673|Mycoplasma_capricolum|2095|Phe|GAA GGTCGTGTAGCTCAGTCGGT-AGAGCAGCAGACTGAAGCTCTGCGTGTCGGCGGTTCAATTCCGTCCACGACCACCA tdbD5053|Mycoplasma_gallisepticum_R|233150|Phe|GAA GGTCTTGTAGCTCAGTCGGT-AGAGCAATGGTCTGAAGAACCATGTGTCGGCAGTTCGATTCTGCCCGAGACCACCA tdbD4947|Mycoplasma_genitalium_G37|243273|Phe|GAA GGTCTTGTAGCTCAGTCGGT-AGAGCAACGGTCTGAAGAACCGTGTGTCGGCAGTTCGATTCTGCCCGAGACCACCA tdbD675|Mycoplasma_mycoides|2102|Phe|GAA GGTCGTGTAGCTCAGTCGGT-AGAGCAGCAGACTGAAGCTCTGCGTGTCGGCGGTTCAATTCCGTCCACGACCACCA tdbD4948|Mycoplasma_pneumoniae_M129|272634|Phe|GAA GGTCTTGTAGCTCAGTCGGT-AGAGCAACGGTCTGAAGAACCGTGTGTCGGCAGTTCGATTCTGCCCGAGACCACCA tdbD4973|Mycoplasma_pulmonis_UAB_CTIP|272635|Phe|GAA GGCTCTGTAGCTCAGTAGGT-AGAGCAACGGATTGAAGCTCCGTGTGTCGCTGGTTCGATTCCTGCCGGAGCCACCA tdbD4926|Neisseria_meningitidis_MC58|122586|Phe|GAA GGCCAGATAGCTCAGTTGGT-AGAGCAACGGATTGAAAATCCGTGTGTCGGCGGTTCGATTCCGCCTCTGGCCACCA tdbD4927|Neisseria_meningitidis_Z2491|122587|Phe|GAA GGCCAGATAGCTCAGTTGGT-AGAGCAACGGATTGAAAATCCGTGTGTCGGCGGTTCGATTCCGCCTCTGGCCACCA tdbD5064|Nitrosomonas_europaea_ATCC_19718|228410|Phe|GAA GGCCAAGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTTGTGTCGGTGGTTCGATTCCGCCCTTGGCCACCA tdbD4972|Nostoc_sp._PCC_7120|103690|Phe|GAA GCCGGGATAGCTCAGTTGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCACGAGTTCAAGTCTCGTTCCTGGCA--- tdbD5035|Oceanobacillus_iheyensis_HTE831|221109|Phe|GAA GGCTTGGTAGCTCAGTCGGT-AGAGCAGAGGACTGAAAATCCTTGTGTCGGCGGTTCGATTCCGTCCCGAGCCA--- tdbD5073|Onion_yellows_phytoplasma_OY-M|262768|Phe|GAA GGCTCTGTAGCTCAGTCGGT-AGAGCAGTGGCCTGAAGAGCCTCGTGTCGACAGTTCGATTCTGTCCGGAGCCACCA tdbD4949|Pasteurella_multocida_subsp._multocida_str._Pm70|272843|Phe|GAA GCCTCGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCA tdbD5076|Photorhabdus_luminescens_subsp._laumondii_TTO1|243265|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCCGGGCACCA tdbD5088|Porphyromonas_gingivalis_W83|242619|Phe|GAA GGTGCCATAGCTCAGTTGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCCCCGGTTCGATTCCTGGTGGCACCA--- tdbD5101|Propionibacterium_acnes_KPA171202|267747|Phe|GAA GGCCGGGTAGCTCAGTTGGTAGTAGCGTTCGCCTGAAAAGTGAAAGGTCACCGGTTCGACCCCGGTCCCGGCCA--- tdbD4951|Pseudomonas_aeruginosa_PAO1|208964|Phe|GAA GCCCAGGTAGCTCAGTTGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCCCTGGGCACCA tdbD5066|Pseudomonas_syringae_pv._tomato_str._DC3000|223283|Phe|GAA GCCCAGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCTCTGGGCACCA tdbD4970|Ralstonia_solanacearum_GMI1000|267608|Phe|GAA GGCCCGGTAGCTCAGTTGGT-AGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATTCCGCCCCAGGCCACCA tdbD5063|Rhodopirellula_baltica_SH_1|243090|Phe|GAA GGTTAGATAGCTCAGTTGGT-AGAGCACGGCCCTGAAAAGGCCGGTGTCGGCGGTTCGAGCCCGCCTCTAACCA--- tdbD5077|Rhodopseudomonas_palustris_CGA009|258594|Phe|GAA GCCCAGGTAGCTCAGTTGGT-AGAGCATGCGACTGAAAATCGCAGTGTCGGTGGTTCGATCCCGCCCCTGGGCACCA tdbD4964|Rickettsia_conorii_str._Malish_7|272944|Phe|GAA GGCCACGTAGCTCAGTCGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGTTGGTTCAATTCCAACCGTGGCCACCA tdbD5018|Rickettsia_prowazekii_str._Madrid_E|272947|Phe|GAA GGCCACGTAGCTCAGTCGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGTTGGTTCAATTCCAACCGTGGCCACCA tdbD5089|Rickettsia_typhi_str._Wilmington|257363|Phe|GAA GGCCACGTAGCTCAGTCGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGTTGGTTCAATTCCAACCGTGGCCACCA tdbD4975|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|220341|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD5062|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2|209261|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD4968|Salmonella_typhimurium_LT2|99287|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD5037|Shewanella_oneidensis_MR-1|211586|Phe|GAA GCCCGAATAGCTCAGTCGGT-AGAGCAGAGGATTGAAAATCCTCGTGTCCCTGGTTCGATTCCGGGTTCGGGCACCA tdbD5038|Shigella_flexneri_2a_str._301|198214|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD4976|Sinorhizobium_meliloti_1021|266834|Phe|GAA GCCCGGATAGCTCAGTTGGT-AGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCAAATCCGCCTCCGGGCACCA tdbD677|Spiroplasma_melliferum|2134|Phe|GAA GGTTCAGTAGCTCAGTTGGT-AGAGCATTTGATTGAAGCTCAAAGTGTCGGCAGTTCAATTCTGTCCTGAACCACCA tdbD5078|Staphylococcus_aureus_subsp._aureus_MRSA252|282458|Phe|GAA GGTTCAGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCAGTTCGACTCTGTCCTGAACCA--- tdbD5020|Staphylococcus_aureus_subsp._aureus_MW2|196620|Phe|GAA GGTTCAGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCAGTTCGACTCTGTCCTGAACCA--- tdbD4930|Staphylococcus_aureus_subsp._aureus_N315|158879|Phe|GAA GGTTCAGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCAGTTCGACTCTGTCCTGAACCA--- tdbD5049|Staphylococcus_epidermidis_ATCC_12228|176280|Phe|GAA GGTTCAGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCAGTTCGATTCTGTCCTGAACCA--- tdbD5039|Streptococcus_agalactiae_2603V/R|208435|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5021|Streptococcus_agalactiae_NEM316|211110|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5040|Streptococcus_mutans_UA159|210007|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD4962|Streptococcus_pneumoniae_TIGR4|170187|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD4961|Streptococcus_pyogenes_M1_GAS|160490|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5022|Streptococcus_pyogenes_MGAS315|198466|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5055|Streptococcus_pyogenes_SSI-1|193567|Phe|GAA GGCTCGGTAGCTCAGTTGGT-AGAGCAATGGATTGAAGCTCCATGTGTCGGCGGTTCGATTCCGTCTCGCGCCA--- tdbD5061|Streptomyces_avermitilis_MA-4680|227882|Phe|GAA GGCTGGGTAGCTCAGTTGGTACGAGCGATCGCCTGAAAAGCGATAGGTCGCCGGTTCGACCCCGGCCCCAGCCA--- tdbD5036|Streptomyces_coelicolor_A3(2)|100226|Phe|GAA GGCTGGGTAGCTCAGTTGGTACGAGCGATCGCCTGAAAAGCGATAGGTCGCCGGTTCGACCCCGGCCCCAGCCA--- tdbD5091|Symbiobacterium_thermophilum_IAM_14863|292459|Phe|GAA GGCCCGGTAGCTCAGTTGGT-AGAGCACGCGACTGAAAATCGCGGTGTCGCCGGTTCGATTCCGGCCTGGGCCACCA tdbD4952|Synechocystis_sp._PCC_6803|1148|Phe|GAA GCCGGGATAGCTCAGTTGGT-AGAGCAGTGGACTGAAAATCCTCGTGTCGGCGGTTCAAGTCCGCCTCCTGGCA--- tdbD5026|Thermoanaerobacter_tengcongensis_MB4|273068|Phe|GAA GCCTCGATAGCTCAGTAGGT-AGAGCAAGGGACTGAAAATCCCTGTGTCAGTGGTTCGATTCCACTTCGAGGCACCA tdbD5023|Thermosynechococcus_elongatus_BP-1|197221|Phe|GAA GCCGGGATAGCTCAGTTGGT-AGAGCAGAGGACTGAAAATCCTCGTGTCGCCAGTTCAATTCTGGCTCCTGGCA--- tdbD4953|Thermotoga_maritima_MSB8|243274|Phe|GAA GGCCAGGTAGCTCAGTTGGT-AGAGCACTGGACTGAAAATCCAGGTGTCGGCGGTTCGATTCCGCCCCTGGCCACCA tdbD5102|Thermus_thermophilus_HB27|262724|Phe|GAA --CGAGGTAGCTCAGTTGGT-AGAGCATGCGACTGAAAATCGCAGTGTCGGCGGTTCGATTCCGCCCCTCGGCACCA tdbD5103|Treponema_denticola_ATCC_35405|243275|Phe|GAA GCCGTTGTAGCTCAGTCGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGACAGTTCGATTCTGTCCGACGGCA--- tdbD4950|Treponema_pallidum_subsp._pallidum_str._Nichols|243276|Phe|GAA GCCGTTGTAGCTCAGTCGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGACAGTTCGATTCTGTCCGACGGCA--- tdbD5050|Tropheryma_whipplei_str._Twist|203267|Phe|GAA GGCTCTGTAGCTCAGTTGGT-AGAGCGTTCGACTGAAAATCGAAAGGTCACCGGATCGATACCGGTCGGAGCCA--- tdbD5051|Tropheryma_whipplei_TW08/27|218496|Phe|GAA GGCTCTGTAGCTCAGTTGGT-AGAGCGTTCGACTGAAAATCGAAAGGTCACCGGATCGATACCGGTCGGAGCCA--- tdbD4932|Ureaplasma_parvum_serovar_3|38504|Phe|GAA GGTTTCGTAGCTCAGTCGGT-AGAGCAACGGACTGAAGATCCGTGTGTCGACAGTTCGATTCTGTCCGAAACCACCA tdbD4928|Vibrio_cholerae_O1_biovar_El_Tor_str._N16961|243277|Phe|GAA GCCTCGATAGCTCAGTCGGT-AGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCA tdbD5104|Wolbachia_endosymbiont_of_Drosophila_melanogaster|163164|Phe|GAA GGCCTGATAGCTCAGTTGGT-AGAGCAAAGGACTGAAAATCCTTGTGTCGCTGGTTCGATTCCTGCTCAGGCCA--- tdbD5028|Xanthomonas_axonopodis_pv._citri_str._306|190486|Phe|GAA GGCCGAGTAGCTCAGTTGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCCTCGGCCACCA tdbD5027|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|190485|Phe|GAA GGCCGAGTAGCTCAGTTGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCCTCGGCCACCA tdbD4954|Xylella_fastidiosa_9a5c|160492|Phe|GAA GGCCGGGTAGCTCAGTTGGT-AGAGCAGGGGACTGAAAATCCCCGTGTCGGGGGTTCGATTCCCTCCCCGGCCACCA tdbD5052|Xylella_fastidiosa_Temecula1|183190|Phe|GAA GGCCGGGTAGCTCAGTCGGT-AGAGCAGGGGACTGAAAATCCCCGTGTCGGGGGTTCGATTCCCTCCCCGGCCACCA tdbD5092|Yersinia_pestis_biovar_Microtus_str._91001|229193|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD4967|Yersinia_pestis_CO92|214092|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD5030|Yersinia_pestis_KIM|187410|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA tdbD5093|Yersinia_pseudotuberculosis_IP_32953|273123|Phe|GAA GCCCGGATAGCTCAGTCGGT-AGAGCAGGGGATTGAAAATCCCCGTGTCCTTGGTTCGATTCCGAGTCCGGGCACCA #=GC SS_cons (((((((..((((.........)))).(((((.......))))).....(((((.......)))))))))))).... #=GC SN 0000000..1111.........1111.22222.......22222.....33333.......333330000000.... #=GF CS 77 columns, 21 paired, 16 covariant; 4 stems //