# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 3903845 nt (7'807'690 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome Zv7_NA992:
50	1	69489	70058	1	1	50	0	(marked for saving)
chromosome Zv7_NA666:
89	1	110832	111488	1	1	89	0	(marked for saving)
chromosome Zv7_NA1375:
94	1	27471	28301	1	1	94	0	(marked for saving)
chromosome Zv7_NA1062:
55	1	1324	2133	1	1	55	0	(marked for saving)
chromosome Zv7_NA298:
107	1	57817	58665	1	1	107	0	(marked for saving)
chromosome Zv7_NA1622:
50	1	429	782	1	1	50	0	(marked for saving)
chromosome Zv7_NA575:
81	1	5363	5689	1	1	81	0	(marked for saving)
chromosome Zv7_NA942:
52	1	62024	62419	1	1	52	0	(marked for saving)
chromosome Zv7_scaffold2486:
55	1	21542	22426	1	2	84	0	(marked for saving)
chromosome Zv7_NA965:
70	1	121507	148590	1	2	139	0.3	(marked for saving)
chromosome Zv7_NA1204:
59	1	6668	13772	1	2	98	0	(marked for saving)
chromosome Zv7_NA3161:
43	1	31816	32664	1	2	81	0	(marked for saving)
chromosome Zv7_NA2903:
45	1	8392	9450	1	2	86	0	(marked for saving)
chromosome Zv7_scaffold2619:
77	1	11051	303065	1	3	158	3.7	(marked for saving)
chromosome Zv7_NA1390:
62	1	29278	35839	1	3	117	0	(marked for saving)
chromosome Zv7_NA743:
59	1	347839	350629	1	3	123	0	(marked for saving)
chromosome Zv7_NA1069:
58	1	51777	54018	1	3	99	0	(marked for saving)
chromosome Zv7_scaffold2511:
205	1	34317	34679	3	3	205	0	(marked for saving)
chromosome Zv7_NA681:
49	1	225860	227811	1	4	138	0	(marked for saving)
chromosome Zv7_NA1834:
64	1	20628	53584	1	4	161	0.4	(marked for saving)
chromosome Zv7_NA229:
64	1	139242	190265	1	4	204	0.6	(marked for saving)
chromosome Zv7_NA938:
66	1	35758	268995	1	4	134	2.9	(marked for saving)
chromosome Zv7_scaffold2495:
44	1	108253	158324	1	5	174	0.6	(marked for saving)
chromosome Zv7_scaffold2643:
55	1	396882	623061	1	5	210	2.8	(marked for saving)
chromosome Zv7_NA1102:
111	1	64846	65946	1	5	443	0	(marked for saving)
chromosome Zv7_NA3755:
92	1	16045	20654	2	5	196	0	(marked for saving)
chromosome Zv7_NA711:
179	1	38295	201303	2	5	244	2	(marked for saving)
chromosome Zv7_NA338:
39	1	70316	107476	1	5	152	0.4	(marked for saving)
chromosome Zv7_NA417:
32	1	26894	34636	1	5	144	0	(marked for saving)
chromosome Zv7_scaffold2576:
65	1	55647	197674	1	5	230	1.8	(marked for saving)
chromosome Zv7_NA3308:
125	1	1701	9224	2	6	289	0	(marked for saving)
chromosome Zv7_NA1679:
80	1	1045	4436	2	7	253	0	(marked for saving)
chromosome Zv7_NA6:
182	1	61110	126604	3	7	333	0.8	(marked for saving)
chromosome Zv7_scaffold2500:
39	1	2246	89802	1	7	231	1.1	(marked for saving)
chromosome Zv7_NA1361:
101	1	49351	53460	2	8	333	0	(marked for saving)
chromosome Zv7_NA2:
199	1	46712	355448	1	8	343	3.9	(marked for saving)
chromosome Zv7_NA1005:
102	1	6222	95310	2	10	371	1.1	(marked for saving)
chromosome Zv7_NA1929:
57	1	11004	36536	1	11	369	0.3	(marked for saving)
chromosome Zv7_NA240:
74	1	104046	515198	1	12	448	5.2	(marked for saving)
chromosome Zv7_NA2935:
58	1	13535	19954	1	13	520	0	(marked for saving)
chromosome Zv7_scaffold2547:
120	1	3246	291076	2	14	448	3.6	(marked for saving)
chromosome Zv7_NA741:
87	1	145400	236541	2	15	446	1.1	(marked for saving)
chromosome Zv7_NA2234:
78	1	7837	13754	1	18	661	0	(marked for saving)
chromosome Zv7_NA754:
43	1	70901	141415	1	19	611	0.9	(marked for saving)
chromosome Zv7_NA973:
85	1	19165	51703	1	20	822	0.4	(marked for saving)
chromosome Zv7_NA3207:
135	1	41053	77559	2	23	852	0.4	(marked for saving)
chromosome Zv7_NA1887:
106	1	9050	73407	2	46	1211	0.8	(marked for saving)
chromosome 4:
215	12492481	12871458	15679358	3	37	1267	35.9	(marked for saving)
198	34120087	34262800	41905589	2	23	1146	97.8	(marked for saving)
129	2732731	3448696	4000390	1	7	575	7	(marked for saving)
52	18855838	23209662	23210516	1	1	52	0	(marked for saving)
43	26195170	33244176	33296655	1	4	155	0.6	(marked for saving)
chromosome 12:
415	23306284	23690836	27365751	5	45	2227	47	(marked for saving)
206	702703	1702654	8500976	2	27	1457	87	(marked for saving)
70	30723694	37845010	38520878	1	5	158	8.6	(marked for saving)
43	12492481	17545727	17546602	1	2	84	0	(marked for saving)
chromosome 3:
431	16240225	16404036	23644643	5	52	2996	92.7	(marked for saving)
164	50047999	53500618	57843937	2	3	206	55.6	(marked for saving)
152	5972968	5986720	13613122	2	17	657	97.6	(marked for saving)
127	24516493	27317416	30615108	2	4	169	42.2	(marked for saving)
99	34939906	36104560	40215619	2	10	335	52.6	(marked for saving)
chromosome 11:
269	1	74502	2152812	4	30	1081	26.6	(marked for saving)
229	35798764	42135619	43588687	3	19	711	18.6	(marked for saving)
224	18855838	20342891	26307627	3	17	624	76.3	(marked for saving)
220	7729723	10121549	15221713	3	15	530	65.3	(marked for saving)
193	28693666	32413399	34993736	4	31	915	33	(marked for saving)
chromosome 15:
261	21861841	22608390	29210028	3	46	2028	84.5	(marked for saving)
211	36111076	36187012	43472209	3	55	1803	93.3	(marked for saving)
75	702703	1264455	5689918	1	3	148	56.6	(marked for saving)
56	13117105	20633518	20634090	1	2	110	0	(marked for saving)
chromosome 18:
287	17702561	17736539	25497638	4	12	547	99.4	(marked for saving)
268	37143983	37182803	44913595	5	29	1026	99	(marked for saving)
257	9621488	11417112	17358298	4	68	2087	76	(marked for saving)
chromosome 25:
300	10033024	10174299	17707264	4	59	1991	96.4	(marked for saving)
112	1912912	5798737	9673202	2	79	2067	49.6	(marked for saving)
57	18855838	21802986	21815137	1	4	165	0.1	(marked for saving)
53	24321298	31658664	32103929	1	7	282	5.7	(marked for saving)
chromosome 19:
527	38219182	40437291	45993585	5	51	2138	71.1	(marked for saving)
399	2771770	2783873	10559602	5	66	2888	99.5	(marked for saving)
143	10891882	10943740	17679572	3	18	712	86.2	(marked for saving)
112	23306284	25380061	26194056	1	8	252	10.4	(marked for saving)
51	32011981	36151435	36987350	1	6	197	10.7	(marked for saving)
chromosome 17:
271	23306284	23317292	31094785	5	34	1045	99.6	(marked for saving)
267	741742	764519	8522656	4	39	1393	99.3	(marked for saving)
247	12492481	13218877	20134516	4	36	1075	88.5	(marked for saving)
179	33690658	33704379	41448094	3	25	810	99.1	(marked for saving)
156	43996954	44252284	51770732	3	21	795	96.2	(marked for saving)
chromosome 6:
587	9720712	9741185	17522530	7	32	1268	99.6	(marked for saving)
305	47666620	47735135	55460632	4	27	1128	98.9	(marked for saving)
156	31387357	32509013	39122098	3	32	1002	84.6	(marked for saving)
143	21861841	27097840	29358785	3	23	709	28.9	(marked for saving)
138	17567551	17570133	20720585	4	31	937	40.3	(marked for saving)
79	39741703	46546893	47447240	1	21	842	11.5	(marked for saving)
77	702703	1198373	1800934	1	4	139	7.7	(marked for saving)
20	1912912	9197852	9197908	1	1	20	0	(marked for saving)
chromosome 23:
334	32558527	32829612	40237377	5	115	5631	94.8	(marked for saving)
249	19480462	19818822	27229145	4	37	1245	94.9	(marked for saving)
164	7729723	11852322	15292772	3	37	1246	44	(marked for saving)
112	2732731	4461502	6285159	2	21	636	23.3	(marked for saving)
chromosome 13:
318	40405366	40654756	48199062	5	95	4432	96.6	(marked for saving)
243	18855838	20456259	25366725	4	34	1118	62.8	(marked for saving)
221	7729723	8853065	14760017	3	49	1653	75.6	(marked for saving)
130	32714683	37983379	40016532	2	20	707	26	(marked for saving)
130	1	341707	2768379	2	6	370	31	(marked for saving)
chromosome 1:
322	26897872	27118831	34406180	6	40	1483	93.3	(marked for saving)
282	3864862	3950857	11629267	6	15	555	98.3	(marked for saving)
272	39039001	39072195	46781619	5	10	433	98.7	(marked for saving)
231	12102091	12130379	19906069	4	58	1862	99.5	(marked for saving)
165	48408361	53269624	56193231	2	82	3573	37.4	(marked for saving)
chromosome 7:
662	9915907	9977429	17720197	5	97	3627	99.1	(marked for saving)
396	49969921	49999238	57730010	3	37	1846	99	(marked for saving)
222	31387357	33372424	37786326	3	34	983	56.5	(marked for saving)
210	59963905	61495703	67764443	3	25	845	80.2	(marked for saving)
180	18855838	23117672	26068077	2	21	840	37.7	(marked for saving)
163	702703	4483719	7759952	3	21	756	41.9	(marked for saving)
20	42084043	49774952	49774996	1	1	20	0	(marked for saving)
chromosome 5:
865	59768710	59863213	67538061	9	153	5504	98.2	(marked for saving)
192	46105060	46488383	51350579	3	32	1093	62.2	(marked for saving)
185	29825797	30414229	31770546	3	7	331	17.3	(marked for saving)
150	9096088	11729118	16140426	2	3	206	56.4	(marked for saving)
128	1	338165	5752102	2	12	572	69.3	(marked for saving)
75	51999949	54276976	59475424	2	28	1038	66.5	(marked for saving)
48	18855838	19797570	20226875	1	5	155	5.4	(marked for saving)
chromosome 21:
668	33495463	33549451	41200638	6	71	2786	97.9	(marked for saving)
402	11945935	12006753	19750735	4	31	1597	99.1	(marked for saving)
255	25492468	25537684	33092075	4	79	2365	96.7	(marked for saving)
109	1	249548	2766026	2	28	1003	32.2	(marked for saving)
50	4177174	11442067	11443179	1	2	95	0	(marked for saving)
chromosome 8:
472	28303276	28339644	36053614	6	52	1925	98.7	(marked for saving)
238	14912899	15074233	22720230	4	76	2305	97.9	(marked for saving)
234	45948904	46063097	53546712	4	70	2175	95.8	(marked for saving)
123	7222216	10264170	14822556	2	27	760	58.3	(marked for saving)
70	1	333590	341157	1	9	444	0	(marked for saving)
chromosome 16:
435	13195183	13199615	20993109	5	31	1654	99.8	(marked for saving)
253	38921884	39185404	44365166	4	38	1112	66.3	(marked for saving)
212	21002983	21004397	28261828	3	60	2857	92.9	(marked for saving)
191	2537536	2545508	10284589	3	119	4249	99.1	(marked for saving)
46	44738695	52513860	52516198	1	2	91	0	(marked for saving)
chromosome 10:
661	14054041	14099932	21817155	6	132	4536	98.8	(marked for saving)
615	702703	815502	6689912	7	87	2890	75.2	(marked for saving)
274	29045017	33214579	36836760	4	130	5892	46.3	(marked for saving)
chromosome 2:
340	1	148822	7003385	4	82	3348	87.7	(marked for saving)
313	30255226	30773610	37871029	4	92	3577	90.9	(marked for saving)
289	42942901	46643928	50736889	4	98	3010	52.4	(marked for saving)
235	18855838	20584357	25799751	4	59	1856	66.7	(marked for saving)
195	10033024	10422733	17303172	3	20	665	88.1	(marked for saving)
84	38102065	39595235	39849861	1	8	335	3.2	(marked for saving)
chromosome 22:
475	1	69855	7691589	5	281	8795	97.6	(marked for saving)
317	8393386	8533808	16037936	5	81	2338	96.1	(marked for saving)
185	17528512	17707548	21744479	2	12	393	51.7	(marked for saving)
51	22447426	30244415	30245497	1	2	88	0	(marked for saving)
chromosome 9:
421	36345310	36690906	43448018	6	308	10364	86.5	(marked for saving)
375	702703	1640253	5685149	5	53	2120	51.8	(marked for saving)
122	24984961	25042797	32789533	2	32	1224	99.2	(marked for saving)
51	17177161	24431093	24973375	1	17	481	6.9	(marked for saving)
chromosome 14:
788	5192188	5228967	12759861	8	107	3941	96.4	(marked for saving)
625	21002983	21053281	28641906	8	127	4721	97.1	(marked for saving)
560	30528499	30545891	38314201	7	154	5578	99.4	(marked for saving)
249	12921910	13030737	18067953	4	17	594	64.5	(marked for saving)
232	46261216	46280801	54047365	3	12	607	99.4	(marked for saving)
42	38336299	38345916	38557019	2	3	62	2.7	(marked for saving)
chromosome 20:
820	18309292	18310747	26044316	8	292	10435	99	(marked for saving)
622	43723681	44773921	51504203	5	79	4603	86.2	(marked for saving)
393	1	16043	3436070	5	62	2494	43.8	(marked for saving)
235	28732705	28733134	36533308	4	14	659	99.9	(marked for saving)
183	36540505	36556555	39126490	3	12	430	32.9	(marked for saving)
67	7729723	9326638	9946582	1	8	379	7.9	(marked for saving)
22	10423414	17977248	18142776	1	3	64	2.1	(marked for saving)
chromosome 24:
2287	18855838	18876433	26644414	17	509	17876	99.4	(marked for saving)
432	32480449	36008776	40273415	6	27	978	54.6	(marked for saving)
232	702703	1188443	8274532	4	71	2638	90.7	(marked for saving)
134	11008999	15358796	18702310	3	11	402	42.8	(marked for saving)
24	26780755	26953654	27497114	1	3	66	6.9	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
24	2287	18855838	18876433	26644414	17	509	17876	99.4	(saved)
5	865	59768710	59863213	67538061	9	153	5504	98.2	(saved)
20	820	18309292	18310747	26044316	8	292	10435	99	(saved)
14	788	5192188	5228967	12759861	8	107	3941	96.4	(saved)
21	668	33495463	33549451	41200638	6	71	2786	97.9	(saved)
7	662	9915907	9977429	17720197	5	97	3627	99.1	(saved)
10	661	14054041	14099932	21817155	6	132	4536	98.8	(saved)
14	625	21002983	21053281	28641906	8	127	4721	97.1	(saved)
20	622	43723681	44773921	51504203	5	79	4603	86.2	(saved)
10	615	702703	815502	6689912	7	87	2890	75.2	(saved)
6	587	9720712	9741185	17522530	7	32	1268	99.6	(saved)
14	560	30528499	30545891	38314201	7	154	5578	99.4	(saved)
19	527	38219182	40437291	45993585	5	51	2138	71.1	(saved)
22	475	1	69855	7691589	5	281	8795	97.6	(saved)
8	472	28303276	28339644	36053614	6	52	1925	98.7	(saved)
16	435	13195183	13199615	20993109	5	31	1654	99.8	(saved)
24	432	32480449	36008776	40273415	6	27	978	54.6	(saved)
3	431	16240225	16404036	23644643	5	52	2996	92.7	(saved)
9	421	36345310	36690906	43448018	6	308	10364	86.5	(saved)
12	415	23306284	23690836	27365751	5	45	2227	47	(saved)
21	402	11945935	12006753	19750735	4	31	1597	99.1	(saved)
19	399	2771770	2783873	10559602	5	66	2888	99.5	(saved)
7	396	49969921	49999238	57730010	3	37	1846	99	(saved)
20	393	1	16043	3436070	5	62	2494	43.8	(saved)
9	375	702703	1640253	5685149	5	53	2120	51.8	(saved)
2	340	1	148822	7003385	4	82	3348	87.7	(saved)
23	334	32558527	32829612	40237377	5	115	5631	94.8	(saved)
1	322	26897872	27118831	34406180	6	40	1483	93.3	(saved)
13	318	40405366	40654756	48199062	5	95	4432	96.6	(saved)
22	317	8393386	8533808	16037936	5	81	2338	96.1	(saved)
2	313	30255226	30773610	37871029	4	92	3577	90.9	(saved)
6	305	47666620	47735135	55460632	4	27	1128	98.9	(saved)
25	300	10033024	10174299	17707264	4	59	1991	96.4	(saved)
2	289	42942901	46643928	50736889	4	98	3010	52.4	(saved)
18	287	17702561	17736539	25497638	4	12	547	99.4	(saved)
1	282	3864862	3950857	11629267	6	15	555	98.3	(saved)
10	274	29045017	33214579	36836760	4	130	5892	46.3	(saved)
1	272	39039001	39072195	46781619	5	10	433	98.7	(saved)
17	271	23306284	23317292	31094785	5	34	1045	99.6	(saved)
11	269	1	74502	2152812	4	30	1081	26.6	(saved)
18	268	37143983	37182803	44913595	5	29	1026	99	(saved)
17	267	741742	764519	8522656	4	39	1393	99.3	(saved)
15	261	21861841	22608390	29210028	3	46	2028	84.5	(saved)
18	257	9621488	11417112	17358298	4	68	2087	76	(saved)
21	255	25492468	25537684	33092075	4	79	2365	96.7	(saved)
16	253	38921884	39185404	44365166	4	38	1112	66.3	(saved)
23	249	19480462	19818822	27229145	4	37	1245	94.9	(saved)
14	249	12921910	13030737	18067953	4	17	594	64.5	(saved)
17	247	12492481	13218877	20134516	4	36	1075	88.5	(saved)
13	243	18855838	20456259	25366725	4	34	1118	62.8	(saved)
8	238	14912899	15074233	22720230	4	76	2305	97.9	(saved)
2	235	18855838	20584357	25799751	4	59	1856	66.7	(saved)
20	235	28732705	28733134	36533308	4	14	659	99.9	(saved)
8	234	45948904	46063097	53546712	4	70	2175	95.8	(saved)
14	232	46261216	46280801	54047365	3	12	607	99.4	(saved)
24	232	702703	1188443	8274532	4	71	2638	90.7	(saved)
1	231	12102091	12130379	19906069	4	58	1862	99.5	(saved)
11	229	35798764	42135619	43588687	3	19	711	18.6	(saved)
11	224	18855838	20342891	26307627	3	17	624	76.3	(saved)
7	222	31387357	33372424	37786326	3	34	983	56.5	(saved)
13	221	7729723	8853065	14760017	3	49	1653	75.6
11	220	7729723	10121549	15221713	3	15	530	65.3
4	215	12492481	12871458	15679358	3	37	1267	35.9
16	212	21002983	21004397	28261828	3	60	2857	92.9
15	211	36111076	36187012	43472209	3	55	1803	93.3
7	210	59963905	61495703	67764443	3	25	845	80.2
12	206	702703	1702654	8500976	2	27	1457	87
Zv7_scaffold2511	205	1	34317	34679	3	3	205	0
Zv7_NA2	199	1	46712	355448	1	8	343	3.9
4	198	34120087	34262800	41905589	2	23	1146	97.8
2	195	10033024	10422733	17303172	3	20	665	88.1
11	193	28693666	32413399	34993736	4	31	915	33
5	192	46105060	46488383	51350579	3	32	1093	62.2
16	191	2537536	2545508	10284589	3	119	4249	99.1
5	185	29825797	30414229	31770546	3	7	331	17.3
22	185	17528512	17707548	21744479	2	12	393	51.7
20	183	36540505	36556555	39126490	3	12	430	32.9
Zv7_NA6	182	1	61110	126604	3	7	333	0.8
7	180	18855838	23117672	26068077	2	21	840	37.7
Zv7_NA711	179	1	38295	201303	2	5	244	2
17	179	33690658	33704379	41448094	3	25	810	99.1
1	165	48408361	53269624	56193231	2	82	3573	37.4
3	164	50047999	53500618	57843937	2	3	206	55.6
23	164	7729723	11852322	15292772	3	37	1246	44
7	163	702703	4483719	7759952	3	21	756	41.9
17	156	43996954	44252284	51770732	3	21	795	96.2
6	156	31387357	32509013	39122098	3	32	1002	84.6
3	152	5972968	5986720	13613122	2	17	657	97.6
5	150	9096088	11729118	16140426	2	3	206	56.4
19	143	10891882	10943740	17679572	3	18	712	86.2
6	143	21861841	27097840	29358785	3	23	709	28.9
6	138	17567551	17570133	20720585	4	31	937	40.3
Zv7_NA3207	135	1	41053	77559	2	23	852	0.4
24	134	11008999	15358796	18702310	3	11	402	42.8
13	130	32714683	37983379	40016532	2	20	707	26
13	130	1	341707	2768379	2	6	370	31
4	129	2732731	3448696	4000390	1	7	575	7
5	128	1	338165	5752102	2	12	572	69.3
3	127	24516493	27317416	30615108	2	4	169	42.2
Zv7_NA3308	125	1	1701	9224	2	6	289	0
8	123	7222216	10264170	14822556	2	27	760	58.3
9	122	24984961	25042797	32789533	2	32	1224	99.2
Zv7_scaffold2547	120	1	3246	291076	2	14	448	3.6
25	112	1912912	5798737	9673202	2	79	2067	49.6
19	112	23306284	25380061	26194056	1	8	252	10.4
23	112	2732731	4461502	6285159	2	21	636	23.3
Zv7_NA1102	111	1	64846	65946	1	5	443	0
21	109	1	249548	2766026	2	28	1003	32.2
Zv7_NA298	107	1	57817	58665	1	1	107	0
Zv7_NA1887	106	1	9050	73407	2	46	1211	0.8
Zv7_NA1005	102	1	6222	95310	2	10	371	1.1
Zv7_NA1361	101	1	49351	53460	2	8	333	0
3	99	34939906	36104560	40215619	2	10	335	52.6
Zv7_NA1375	94	1	27471	28301	1	1	94	0
Zv7_NA3755	92	1	16045	20654	2	5	196	0
Zv7_NA666	89	1	110832	111488	1	1	89	0
Zv7_NA741	87	1	145400	236541	2	15	446	1.1
Zv7_NA973	85	1	19165	51703	1	20	822	0.4
2	84	38102065	39595235	39849861	1	8	335	3.2
Zv7_NA575	81	1	5363	5689	1	1	81	0
Zv7_NA1679	80	1	1045	4436	2	7	253	0
6	79	39741703	46546893	47447240	1	21	842	11.5
Zv7_NA2234	78	1	7837	13754	1	18	661	0
Zv7_scaffold2619	77	1	11051	303065	1	3	158	3.7
6	77	702703	1198373	1800934	1	4	139	7.7
15	75	702703	1264455	5689918	1	3	148	56.6
5	75	51999949	54276976	59475424	2	28	1038	66.5
Zv7_NA240	74	1	104046	515198	1	12	448	5.2
Zv7_NA965	70	1	121507	148590	1	2	139	0.3
12	70	30723694	37845010	38520878	1	5	158	8.6
8	70	1	333590	341157	1	9	444	0
20	67	7729723	9326638	9946582	1	8	379	7.9
Zv7_NA938	66	1	35758	268995	1	4	134	2.9
Zv7_scaffold2576	65	1	55647	197674	1	5	230	1.8
Zv7_NA1834	64	1	20628	53584	1	4	161	0.4
Zv7_NA229	64	1	139242	190265	1	4	204	0.6
Zv7_NA1390	62	1	29278	35839	1	3	117	0
Zv7_NA1204	59	1	6668	13772	1	2	98	0
Zv7_NA743	59	1	347839	350629	1	3	123	0
Zv7_NA1069	58	1	51777	54018	1	3	99	0
Zv7_NA2935	58	1	13535	19954	1	13	520	0
Zv7_NA1929	57	1	11004	36536	1	11	369	0.3
25	57	18855838	21802986	21815137	1	4	165	0.1
15	56	13117105	20633518	20634090	1	2	110	0
Zv7_NA1062	55	1	1324	2133	1	1	55	0
Zv7_scaffold2486	55	1	21542	22426	1	2	84	0
Zv7_scaffold2643	55	1	396882	623061	1	5	210	2.8
25	53	24321298	31658664	32103929	1	7	282	5.7
Zv7_NA942	52	1	62024	62419	1	1	52	0
4	52	18855838	23209662	23210516	1	1	52	0
19	51	32011981	36151435	36987350	1	6	197	10.7
22	51	22447426	30244415	30245497	1	2	88	0
9	51	17177161	24431093	24973375	1	17	481	6.9
Zv7_NA992	50	1	69489	70058	1	1	50	0
Zv7_NA1622	50	1	429	782	1	1	50	0
21	50	4177174	11442067	11443179	1	2	95	0
Zv7_NA681	49	1	225860	227811	1	4	138	0
5	48	18855838	19797570	20226875	1	5	155	5.4
16	46	44738695	52513860	52516198	1	2	91	0
Zv7_NA2903	45	1	8392	9450	1	2	86	0
Zv7_scaffold2495	44	1	108253	158324	1	5	174	0.6
Zv7_NA3161	43	1	31816	32664	1	2	81	0
Zv7_NA754	43	1	70901	141415	1	19	611	0.9
4	43	26195170	33244176	33296655	1	4	155	0.6
12	43	12492481	17545727	17546602	1	2	84	0
14	42	38336299	38345916	38557019	2	3	62	2.7
Zv7_NA338	39	1	70316	107476	1	5	152	0.4
Zv7_scaffold2500	39	1	2246	89802	1	7	231	1.1
Zv7_NA417	32	1	26894	34636	1	5	144	0
24	24	26780755	26953654	27497114	1	3	66	6.9
20	22	10423414	17977248	18142776	1	3	64	2.1
6	20	1912912	9197852	9197908	1	1	20	0
7	20	42084043	49774952	49774996	1	1	20	0
global files summary:
Danio_rerio.glob01.24.minQN1.fac2.01.blastresult
Danio_rerio.glob02.5.minQN1.fac2.01.blastresult
Danio_rerio.glob03.20.minQN1.fac2.01.blastresult
Danio_rerio.glob04.14.minQN1.fac2.01.blastresult
Danio_rerio.glob05.21.minQN1.fac2.01.blastresult
Danio_rerio.glob06.7.minQN1.fac2.01.blastresult
Danio_rerio.glob07.10.minQN1.fac2.01.blastresult
Danio_rerio.glob08.14.minQN1.fac2.02.blastresult
Danio_rerio.glob09.20.minQN1.fac2.02.blastresult
Danio_rerio.glob10.10.minQN1.fac2.02.blastresult
Danio_rerio.glob11.6.minQN1.fac2.01.blastresult
Danio_rerio.glob12.14.minQN1.fac2.03.blastresult
Danio_rerio.glob13.19.minQN1.fac2.01.blastresult
Danio_rerio.glob14.22.minQN1.fac2.01.blastresult
Danio_rerio.glob15.8.minQN1.fac2.01.blastresult
Danio_rerio.glob16.16.minQN1.fac2.01.blastresult
Danio_rerio.glob17.24.minQN1.fac2.02.blastresult
Danio_rerio.glob18.3.minQN1.fac2.01.blastresult
Danio_rerio.glob19.9.minQN1.fac2.01.blastresult
Danio_rerio.glob20.12.minQN1.fac2.01.blastresult
Danio_rerio.glob21.21.minQN1.fac2.02.blastresult
Danio_rerio.glob22.19.minQN1.fac2.02.blastresult
Danio_rerio.glob23.7.minQN1.fac2.02.blastresult
Danio_rerio.glob24.20.minQN1.fac2.03.blastresult
Danio_rerio.glob25.9.minQN1.fac2.02.blastresult
Danio_rerio.glob26.2.minQN1.fac2.01.blastresult
Danio_rerio.glob27.23.minQN1.fac2.01.blastresult
Danio_rerio.glob28.1.minQN1.fac2.01.blastresult
Danio_rerio.glob29.13.minQN1.fac2.01.blastresult
Danio_rerio.glob30.22.minQN1.fac2.02.blastresult
Danio_rerio.glob31.2.minQN1.fac2.02.blastresult
Danio_rerio.glob32.6.minQN1.fac2.02.blastresult
Danio_rerio.glob33.25.minQN1.fac2.01.blastresult
Danio_rerio.glob34.2.minQN1.fac2.03.blastresult
Danio_rerio.glob35.18.minQN1.fac2.01.blastresult
Danio_rerio.glob36.1.minQN1.fac2.02.blastresult
Danio_rerio.glob37.10.minQN1.fac2.03.blastresult
Danio_rerio.glob38.1.minQN1.fac2.03.blastresult
Danio_rerio.glob39.17.minQN1.fac2.01.blastresult
Danio_rerio.glob40.11.minQN1.fac2.01.blastresult
Danio_rerio.glob41.18.minQN1.fac2.02.blastresult
Danio_rerio.glob42.17.minQN1.fac2.02.blastresult
Danio_rerio.glob43.15.minQN1.fac2.01.blastresult
Danio_rerio.glob44.18.minQN1.fac2.03.blastresult
Danio_rerio.glob45.21.minQN1.fac2.03.blastresult
Danio_rerio.glob46.16.minQN1.fac2.02.blastresult
Danio_rerio.glob47.23.minQN1.fac2.02.blastresult
Danio_rerio.glob48.14.minQN1.fac2.04.blastresult
Danio_rerio.glob49.17.minQN1.fac2.03.blastresult
Danio_rerio.glob50.13.minQN1.fac2.02.blastresult
Danio_rerio.glob51.8.minQN1.fac2.02.blastresult
Danio_rerio.glob52.2.minQN1.fac2.04.blastresult
Danio_rerio.glob53.20.minQN1.fac2.04.blastresult
Danio_rerio.glob54.8.minQN1.fac2.03.blastresult
Danio_rerio.glob55.14.minQN1.fac2.05.blastresult
Danio_rerio.glob56.24.minQN1.fac2.03.blastresult
Danio_rerio.glob57.1.minQN1.fac2.04.blastresult
Danio_rerio.glob58.11.minQN1.fac2.02.blastresult
Danio_rerio.glob59.11.minQN1.fac2.03.blastresult
Danio_rerio.glob60.7.minQN1.fac2.03.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 2701091 nt (5'402'182 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome Zv7_NA905:
54	27012	109457	110611	1	1	54	0	(marked for saving)
chromosome Zv7_scaffold2511:
66	27012	34371	34583	1	1	66	0	(marked for saving)
chromosome Zv7_NA1164:
78	1	17178	17573	1	1	78	0	(marked for saving)
chromosome Zv7_scaffold2558:
63	27012	1930091	1997977	1	2	85	1.2	(marked for saving)
chromosome Zv7_NA6:
52	27012	114776	126598	1	2	101	0.2	(marked for saving)
chromosome Zv7_NA1431:
44	1	5195	5611	1	2	81	0	(marked for saving)
chromosome Zv7_NA3324:
118	1	98	7702	1	3	257	0.1	(marked for saving)
chromosome Zv7_NA817:
112	1	4519	5448	1	5	321	0	(marked for saving)
chromosome Zv7_NA126:
49	1	16710	20286	1	6	238	0	(marked for saving)
chromosome 15:
61	26891863	31753531	32292705	1	6	198	9.9	(marked for saving)
chromosome Zv7_NA472:
58	1	16817	77154	1	6	247	1.1	(marked for saving)
chromosome Zv7_NA1282:
66	1	2848	56196	1	9	304	0.9	(marked for saving)
chromosome 9:
68	41380853	45973929	46782756	1	5	157	14.9	(marked for saving)
67	1674683	1922383	3021772	1	8	396	20.3	(marked for saving)
chromosome Zv7_NA1092:
109	1	19972	91051	1	13	550	1.3	(marked for saving)
chromosome 1:
101	7736001	9788741	10159355	1	9	352	6.8	(marked for saving)
100	41391707	46701793	46781559	2	3	134	1.4	(marked for saving)
69	27751152	28122685	28734070	1	7	297	11.3	(marked for saving)
chromosome 10:
67	7959962	10768995	11026276	1	3	111	4.7	(marked for saving)
57	35511182	39511402	40889028	1	16	461	25.5	(marked for saving)
chromosome 25:
116	15267976	18968435	20662289	2	23	843	31.3	(marked for saving)
chromosome 24:
237	18803388	19316543	20478391	2	20	853	21.5	(marked for saving)
66	31147415	35976322	36532915	1	4	127	10.3	(marked for saving)
chromosome 22:
126	7659454	7676924	13013635	2	21	603	98.7	(marked for saving)
66	22812625	27682165	28202443	1	2	86	9.6	(marked for saving)
23	2230243	7578307	7629195	1	2	43	0.9	(marked for saving)
chromosome 6:
191	34799741	35771119	36609028	2	11	452	15.5	(marked for saving)
119	49277637	52139145	54664270	2	17	517	46.7	(marked for saving)
67	13893227	15297595	15426840	1	2	87	2.3	(marked for saving)
chromosome 8:
139	23456927	24915419	28517335	2	17	558	66.6	(marked for saving)
106	36098075	41171046	41495407	1	13	529	6	(marked for saving)
chromosome 2:
110	5567631	6323879	10919949	2	7	223	85	(marked for saving)
59	29310300	34117509	34686190	1	11	358	10.5	(marked for saving)
52	16345020	16554801	17764327	1	16	459	22.3	(marked for saving)
chromosome 4:
203	2458002	2467076	7855002	3	21	705	99.7	(marked for saving)
64	17476118	22685856	22851483	1	3	105	3	(marked for saving)
chromosome 18:
131	14455719	14509642	19837872	2	22	763	98.6	(marked for saving)
70	24719899	29197568	30114556	1	5	154	16.9	(marked for saving)
56	20938359	22545422	23733773	1	11	344	21.9	(marked for saving)
chromosome 20:
155	1	297949	464916	1	6	373	3	(marked for saving)
131	25012187	25234486	30344887	2	19	552	94.5	(marked for saving)
86	50726659	54401362	56120541	1	9	262	31.8	(marked for saving)
60	18556558	22204207	23238483	1	4	126	19.1	(marked for saving)
chromosome 3:
99	32422519	33296081	33933814	1	5	206	11.8	(marked for saving)
72	17836579	22530450	23126266	1	16	699	11	(marked for saving)
58	53977297	59286708	59377827	1	9	353	1.6	(marked for saving)
53	14460204	16217328	16989639	1	15	430	14.2	(marked for saving)
44	9814312	10516043	10594136	1	5	182	1.4	(marked for saving)
chromosome 17:
113	1	413347	2264566	1	26	810	34.2	(marked for saving)
113	18556558	19318876	20710334	2	15	446	25.7	(marked for saving)
58	44649184	48628969	50037292	1	10	268	26	(marked for saving)
chromosome 23:
211	32506315	32891628	37801962	2	30	1378	90.8	(marked for saving)
104	24457037	26296300	27700770	1	12	378	25.9	(marked for saving)
87	5090150	6035475	7450791	1	9	286	26.1	(marked for saving)
62	39610208	44704187	44989228	1	2	82	5.2	(marked for saving)
chromosome 19:
194	21608801	22267192	26132700	2	15	654	71.5	(marked for saving)
135	5105080	5107102	10491758	2	9	332	99.6	(marked for saving)
69	10507280	10512139	10548492	1	5	331	0.6	(marked for saving)
chromosome 16:
136	35030256	36920352	38143367	2	13	401	22.6	(marked for saving)
117	15852446	15879376	20948851	2	23	661	93.8	(marked for saving)
113	42971490	47822640	48367016	1	15	595	10	(marked for saving)
43	23712647	27909356	28461241	1	9	273	10.2	(marked for saving)
chromosome 13:
66	8562488	9475169	11030459	1	17	489	28.7	(marked for saving)
65	16071546	18544705	18792465	1	2	85	4.5	(marked for saving)
64	1	226320	687542	1	2	84	8.5	(marked for saving)
60	28793727	30198323	32679504	1	35	907	45.9	(marked for saving)
55	40084325	44895243	45460041	1	10	320	10.4	(marked for saving)
chromosome 12:
232	25577124	25956944	30953693	3	46	1433	92.4	(marked for saving)
88	17014637	17710389	18490055	1	13	385	14.4	(marked for saving)
72	11018195	11045149	11748557	1	7	200	13	(marked for saving)
chromosome 11:
235	26848935	27051174	32227970	3	62	2536	95.8	(marked for saving)
186	189078	417352	2772301	2	25	940	43.5	(marked for saving)
22	21608801	25960986	26533231	1	3	64	10.5	(marked for saving)
chromosome 5:
889	10156137	11243216	14865915	2	56	2815	67	(marked for saving)
327	29252914	29259517	34636502	2	5	392	99.5	(marked for saving)
134	55723694	58959649	61122870	2	9	294	40	(marked for saving)
103	1	1565585	1602109	1	4	213	0.6	(marked for saving)
53	41867051	43494113	44524616	1	14	385	19	(marked for saving)
53	34682125	34745366	35240826	1	12	365	9.1	(marked for saving)
chromosome 21:
204	17356313	17815416	22308960	3	97	3704	83.1	(marked for saving)
81	39343267	41200423	44730509	1	13	417	65.3	(marked for saving)
76	31834209	34274899	34828068	1	4	145	10.2	(marked for saving)
chromosome 14:
925	3889585	3937633	9217772	7	73	3294	97.7	(marked for saving)
240	32224124	32236088	37617628	3	23	890	99.6	(marked for saving)
232	21041570	21091270	26261216	3	19	645	95.7	(marked for saving)
62	38814808	44212359	44216674	1	2	114	0	(marked for saving)
58	26632847	28693859	30181755	1	7	239	27.5	(marked for saving)
23	37680346	37700834	38273127	1	4	83	10.5	(marked for saving)
chromosome 7:
705	46539954	49033751	51630791	5	75	3821	48	(marked for saving)
182	30846563	30962946	35789353	3	55	1742	89.3	(marked for saving)
124	21608801	21674638	26936010	2	24	717	97.3	(marked for saving)
113	16125568	20775509	21505185	2	9	335	13.5	(marked for saving)
97	62611499	67428171	68002996	1	5	236	10.6	(marked for saving)
46	3322354	4618202	4791363	1	5	138	3.2	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
14	925	3889585	3937633	9217772	7	73	3294	97.7	(saved)
5	889	10156137	11243216	14865915	2	56	2815	67	(saved)
7	705	46539954	49033751	51630791	5	75	3821	48	(saved)
5	327	29252914	29259517	34636502	2	5	392	99.5	(saved)
14	240	32224124	32236088	37617628	3	23	890	99.6	(saved)
24	237	18803388	19316543	20478391	2	20	853	21.5	(saved)
11	235	26848935	27051174	32227970	3	62	2536	95.8	(saved)
12	232	25577124	25956944	30953693	3	46	1433	92.4	(saved)
14	232	21041570	21091270	26261216	3	19	645	95.7	(saved)
23	211	32506315	32891628	37801962	2	30	1378	90.8	(saved)
21	204	17356313	17815416	22308960	3	97	3704	83.1	(saved)
4	203	2458002	2467076	7855002	3	21	705	99.7	(saved)
19	194	21608801	22267192	26132700	2	15	654	71.5	(saved)
6	191	34799741	35771119	36609028	2	11	452	15.5	(saved)
11	186	189078	417352	2772301	2	25	940	43.5	(saved)
7	182	30846563	30962946	35789353	3	55	1742	89.3	(saved)
20	155	1	297949	464916	1	6	373	3	(saved)
8	139	23456927	24915419	28517335	2	17	558	66.6	(saved)
16	136	35030256	36920352	38143367	2	13	401	22.6	(saved)
19	135	5105080	5107102	10491758	2	9	332	99.6	(saved)
5	134	55723694	58959649	61122870	2	9	294	40	(saved)
18	131	14455719	14509642	19837872	2	22	763	98.6	(saved)
20	131	25012187	25234486	30344887	2	19	552	94.5	(saved)
22	126	7659454	7676924	13013635	2	21	603	98.7	(saved)
7	124	21608801	21674638	26936010	2	24	717	97.3	(saved)
6	119	49277637	52139145	54664270	2	17	517	46.7	(saved)
Zv7_NA3324	118	1	98	7702	1	3	257	0.1	(saved)
16	117	15852446	15879376	20948851	2	23	661	93.8	(saved)
25	116	15267976	18968435	20662289	2	23	843	31.3	(saved)
17	113	1	413347	2264566	1	26	810	34.2	(saved)
17	113	18556558	19318876	20710334	2	15	446	25.7	(saved)
16	113	42971490	47822640	48367016	1	15	595	10	(saved)
7	113	16125568	20775509	21505185	2	9	335	13.5	(saved)
Zv7_NA817	112	1	4519	5448	1	5	321	0	(saved)
2	110	5567631	6323879	10919949	2	7	223	85	(saved)
Zv7_NA1092	109	1	19972	91051	1	13	550	1.3	(saved)
8	106	36098075	41171046	41495407	1	13	529	6	(saved)
23	104	24457037	26296300	27700770	1	12	378	25.9	(saved)
5	103	1	1565585	1602109	1	4	213	0.6	(saved)
1	101	7736001	9788741	10159355	1	9	352	6.8	(saved)
1	100	41391707	46701793	46781559	2	3	134	1.4	(saved)
3	99	32422519	33296081	33933814	1	5	206	11.8	(saved)
7	97	62611499	67428171	68002996	1	5	236	10.6	(saved)
12	88	17014637	17710389	18490055	1	13	385	14.4	(saved)
23	87	5090150	6035475	7450791	1	9	286	26.1	(saved)
20	86	50726659	54401362	56120541	1	9	262	31.8	(saved)
21	81	39343267	41200423	44730509	1	13	417	65.3	(saved)
Zv7_NA1164	78	1	17178	17573	1	1	78	0	(saved)
21	76	31834209	34274899	34828068	1	4	145	10.2	(saved)
3	72	17836579	22530450	23126266	1	16	699	11	(saved)
12	72	11018195	11045149	11748557	1	7	200	13	(saved)
18	70	24719899	29197568	30114556	1	5	154	16.9	(saved)
1	69	27751152	28122685	28734070	1	7	297	11.3	(saved)
19	69	10507280	10512139	10548492	1	5	331	0.6	(saved)
9	68	41380853	45973929	46782756	1	5	157	14.9	(saved)
9	67	1674683	1922383	3021772	1	8	396	20.3	(saved)
10	67	7959962	10768995	11026276	1	3	111	4.7	(saved)
6	67	13893227	15297595	15426840	1	2	87	2.3	(saved)
Zv7_scaffold2511	66	27012	34371	34583	1	1	66	0	(saved)
Zv7_NA1282	66	1	2848	56196	1	9	304	0.9	(saved)
24	66	31147415	35976322	36532915	1	4	127	10.3
22	66	22812625	27682165	28202443	1	2	86	9.6
13	66	8562488	9475169	11030459	1	17	489	28.7
13	65	16071546	18544705	18792465	1	2	85	4.5
4	64	17476118	22685856	22851483	1	3	105	3
13	64	1	226320	687542	1	2	84	8.5
Zv7_scaffold2558	63	27012	1930091	1997977	1	2	85	1.2
23	62	39610208	44704187	44989228	1	2	82	5.2
14	62	38814808	44212359	44216674	1	2	114	0
15	61	26891863	31753531	32292705	1	6	198	9.9
20	60	18556558	22204207	23238483	1	4	126	19.1
13	60	28793727	30198323	32679504	1	35	907	45.9
2	59	29310300	34117509	34686190	1	11	358	10.5
Zv7_NA472	58	1	16817	77154	1	6	247	1.1
3	58	53977297	59286708	59377827	1	9	353	1.6
17	58	44649184	48628969	50037292	1	10	268	26
14	58	26632847	28693859	30181755	1	7	239	27.5
10	57	35511182	39511402	40889028	1	16	461	25.5
18	56	20938359	22545422	23733773	1	11	344	21.9
13	55	40084325	44895243	45460041	1	10	320	10.4
Zv7_NA905	54	27012	109457	110611	1	1	54	0
3	53	14460204	16217328	16989639	1	15	430	14.2
5	53	41867051	43494113	44524616	1	14	385	19
5	53	34682125	34745366	35240826	1	12	365	9.1
Zv7_NA6	52	27012	114776	126598	1	2	101	0.2
2	52	16345020	16554801	17764327	1	16	459	22.3
Zv7_NA126	49	1	16710	20286	1	6	238	0
7	46	3322354	4618202	4791363	1	5	138	3.2
Zv7_NA1431	44	1	5195	5611	1	2	81	0
3	44	9814312	10516043	10594136	1	5	182	1.4
16	43	23712647	27909356	28461241	1	9	273	10.2
22	23	2230243	7578307	7629195	1	2	43	0.9
14	23	37680346	37700834	38273127	1	4	83	10.5
11	22	21608801	25960986	26533231	1	3	64	10.5
global files summary:
Danio_rerio.glob01.14.minQN1.fac2.01.blastresult
Danio_rerio.glob02.5.minQN1.fac2.01.blastresult
Danio_rerio.glob03.7.minQN1.fac2.01.blastresult
Danio_rerio.glob04.5.minQN1.fac2.02.blastresult
Danio_rerio.glob05.14.minQN1.fac2.02.blastresult
Danio_rerio.glob06.24.minQN1.fac2.01.blastresult
Danio_rerio.glob07.11.minQN1.fac2.01.blastresult
Danio_rerio.glob08.12.minQN1.fac2.01.blastresult
Danio_rerio.glob09.14.minQN1.fac2.03.blastresult
Danio_rerio.glob10.23.minQN1.fac2.01.blastresult
Danio_rerio.glob11.21.minQN1.fac2.01.blastresult
Danio_rerio.glob12.4.minQN1.fac2.01.blastresult
Danio_rerio.glob13.19.minQN1.fac2.01.blastresult
Danio_rerio.glob14.6.minQN1.fac2.01.blastresult
Danio_rerio.glob15.11.minQN1.fac2.02.blastresult
Danio_rerio.glob16.7.minQN1.fac2.02.blastresult
Danio_rerio.glob17.20.minQN1.fac2.01.blastresult
Danio_rerio.glob18.8.minQN1.fac2.01.blastresult
Danio_rerio.glob19.16.minQN1.fac2.01.blastresult
Danio_rerio.glob20.19.minQN1.fac2.02.blastresult
Danio_rerio.glob21.5.minQN1.fac2.03.blastresult
Danio_rerio.glob22.18.minQN1.fac2.01.blastresult
Danio_rerio.glob23.20.minQN1.fac2.02.blastresult
Danio_rerio.glob24.22.minQN1.fac2.01.blastresult
Danio_rerio.glob25.7.minQN1.fac2.03.blastresult
Danio_rerio.glob26.6.minQN1.fac2.02.blastresult
Danio_rerio.glob27.Zv7_NA3324.minQN1.fac2.01.blastresult
Danio_rerio.glob28.16.minQN1.fac2.02.blastresult
Danio_rerio.glob29.25.minQN1.fac2.01.blastresult
Danio_rerio.glob30.17.minQN1.fac2.01.blastresult
Danio_rerio.glob31.17.minQN1.fac2.02.blastresult
Danio_rerio.glob32.16.minQN1.fac2.03.blastresult
Danio_rerio.glob33.7.minQN1.fac2.04.blastresult
Danio_rerio.glob34.Zv7_NA817.minQN1.fac2.01.blastresult
Danio_rerio.glob35.2.minQN1.fac2.01.blastresult
Danio_rerio.glob36.Zv7_NA1092.minQN1.fac2.01.blastresult
Danio_rerio.glob37.8.minQN1.fac2.02.blastresult
Danio_rerio.glob38.23.minQN1.fac2.02.blastresult
Danio_rerio.glob39.5.minQN1.fac2.04.blastresult
Danio_rerio.glob40.1.minQN1.fac2.01.blastresult
Danio_rerio.glob41.1.minQN1.fac2.02.blastresult
Danio_rerio.glob42.3.minQN1.fac2.01.blastresult
Danio_rerio.glob43.7.minQN1.fac2.05.blastresult
Danio_rerio.glob44.12.minQN1.fac2.02.blastresult
Danio_rerio.glob45.23.minQN1.fac2.03.blastresult
Danio_rerio.glob46.20.minQN1.fac2.03.blastresult
Danio_rerio.glob47.21.minQN1.fac2.02.blastresult
Danio_rerio.glob48.Zv7_NA1164.minQN1.fac2.01.blastresult
Danio_rerio.glob49.21.minQN1.fac2.03.blastresult
Danio_rerio.glob50.3.minQN1.fac2.02.blastresult
Danio_rerio.glob51.12.minQN1.fac2.03.blastresult
Danio_rerio.glob52.18.minQN1.fac2.02.blastresult
Danio_rerio.glob53.1.minQN1.fac2.03.blastresult
Danio_rerio.glob54.19.minQN1.fac2.03.blastresult
Danio_rerio.glob55.9.minQN1.fac2.01.blastresult
Danio_rerio.glob56.9.minQN1.fac2.02.blastresult
Danio_rerio.glob57.10.minQN1.fac2.01.blastresult
Danio_rerio.glob58.6.minQN1.fac2.03.blastresult
Danio_rerio.glob59.Zv7_scaffold2511.minQN1.fac2.01.blastresult
Danio_rerio.glob60.Zv7_NA1282.minQN1.fac2.01.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 3426964 nt (6'853'928 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome Zv7_NA1622:
55	1	414	977	1	1	55	0	(marked for saving)
chromosome Zv7_NA1165:
49	1	7816	7941	1	1	49	0	(marked for saving)
chromosome Zv7_NA995:
51	1	48204	48893	1	1	51	0	(marked for saving)
chromosome Zv7_NA1057:
81	1	1901	3225	1	2	127	0	(marked for saving)
chromosome Zv7_NA1204:
49	1	6698	13790	1	2	85	0.1	(marked for saving)
chromosome Zv7_NA1144:
55	1	39280	50175	1	2	79	0.1	(marked for saving)
chromosome Zv7_NA6:
58	1	37475	126598	1	2	80	1.3	(marked for saving)
chromosome Zv7_scaffold2511:
69	1	32486	34574	1	2	88	0	(marked for saving)
chromosome Zv7_NA924:
68	1	55425	224104	1	3	112	2.4	(marked for saving)
chromosome Zv7_NA888:
86	1	86419	88641	1	4	292	0	(marked for saving)
chromosome Zv7_NA3308:
180	1	1701	9224	3	9	428	0.1	(marked for saving)
chromosome Zv7_scaffold2637:
46	1	31012	186526	1	10	291	2.2	(marked for saving)
chromosome Zv7_NA3755:
135	1	9743	21073	3	11	386	0.1	(marked for saving)
chromosome Zv7_NA1679:
120	1	1036	4523	3	11	404	0	(marked for saving)
chromosome Zv7_NA754:
39	1	70913	141421	1	14	450	1	(marked for saving)
chromosome Zv7_scaffold2547:
177	1	9704	328498	3	15	576	4.6	(marked for saving)
chromosome Zv7_NA1361:
153	1	16920	53460	3	15	573	0.5	(marked for saving)
chromosome Zv7_NA1005:
150	1	565	85991	3	16	580	1.2	(marked for saving)
chromosome Zv7_NA741:
88	1	145355	228771	2	17	484	1.2	(marked for saving)
chromosome 4:
108	25003308	27175889	28395113	1	18	825	17.7	(marked for saving)
64	32919678	39527570	39754432	1	6	168	3.3	(marked for saving)
45	11638008	12871458	12876920	1	4	132	0	(marked for saving)
chromosome 12:
105	40605545	45560455	47454455	1	16	753	27.6	(marked for saving)
78	21277265	26074933	27106988	1	13	470	15	(marked for saving)
chromosome Zv7_NA3207:
209	1	41053	84661	3	43	1654	0.6	(marked for saving)
chromosome Zv7_NA1887:
157	1	4935	78034	3	50	1353	1	(marked for saving)
chromosome 3:
106	29609281	33586744	34940272	1	5	191	19.7	(marked for saving)
100	4489371	4862608	6860656	1	29	1039	29.1	(marked for saving)
82	20767621	22255914	23126275	1	14	817	12.6	(marked for saving)
78	55860101	62226591	62681024	1	3	121	6.6	(marked for saving)
52	43591441	44497931	45006641	1	7	224	7.4	(marked for saving)
chromosome 11:
233	20767621	24829642	26264263	4	30	962	20.9	(marked for saving)
129	29609281	32489375	33250212	3	25	762	11.1	(marked for saving)
67	34271	196116	645913	1	8	206	6.5	(marked for saving)
63	36805981	43546870	43655745	1	4	140	1.5	(marked for saving)
chromosome 19:
268	8610766	9398850	15106665	3	28	1449	83.2	(marked for saving)
261	34450346	34480809	41290676	3	51	4799	99.3	(marked for saving)
23	27596346	34038937	34431900	1	2	46	5.7	(marked for saving)
chromosome 18:
231	39346537	43911103	46191711	4	42	1186	33.2	(marked for saving)
200	11930537	12410173	18720316	4	39	1180	92	(marked for saving)
198	20875007	22136544	27133895	2	10	383	72.9	(marked for saving)
chromosome 16:
175	20973241	20991501	27826543	3	19	606	99.7	(marked for saving)
150	4489371	8511421	9783639	3	15	570	18.5	(marked for saving)
116	37559921	42003331	44404024	2	29	818	35	(marked for saving)
102	14119241	15947634	20860132	2	12	448	71.6	(marked for saving)
102	582591	885932	1927366	1	9	423	15.1	(marked for saving)
51	27861511	27918402	29186440	2	9	205	18.5	(marked for saving)
chromosome 15:
280	36819418	36886739	43651496	4	31	1219	98.6	(marked for saving)
146	29999688	34937305	36740675	4	47	1129	26.3	(marked for saving)
74	5599448	7312795	9139082	1	14	385	26.6	(marked for saving)
49	13618628	15028941	15379905	1	3	115	5.1	(marked for saving)
chromosome 22:
192	8464691	8533748	15296151	4	75	2074	98.6	(marked for saving)
176	1336531	2641092	8169804	3	43	1174	80.6	(marked for saving)
chromosome 17:
284	25736771	26797807	28774665	4	66	2379	28.8	(marked for saving)
241	7299511	7572691	14128345	4	53	1607	95.6	(marked for saving)
146	40404331	40462784	47240740	2	6	285	98.8	(marked for saving)
50	1	19604	1164381	1	14	378	16.7	(marked for saving)
21	33550331	40373018	40373056	1	1	21	0	(marked for saving)
chromosome 25:
171	6614111	6631109	13463853	3	127	3489	99.6	(marked for saving)
chromosome 5:
341	60813825	60832994	67600533	4	67	2327	98.7	(marked for saving)
299	45255245	45286179	52002663	5	67	2090	97.9	(marked for saving)
43	53959825	60370171	60736794	2	4	84	5.3	(marked for saving)
26	52006435	52426676	52426801	1	1	26	0	(marked for saving)
chromosome 21:
202	29208936	29311590	36016531	3	153	4536	97.8	(marked for saving)
chromosome 7:
259	48663401	49460010	51736510	2	28	1184	33.2	(marked for saving)
246	3701161	3706937	10149675	4	62	2272	94	(marked for saving)
175	10966401	11125263	17651152	3	53	1652	95.2	(marked for saving)
125	29609281	29671171	36356796	2	5	327	97.5	(marked for saving)
77	61103411	67424179	67944045	1	3	121	7.5	(marked for saving)
62	36360471	36558032	38660451	1	4	167	30.6	(marked for saving)
22	22618201	28978199	29315637	1	3	65	4.9	(marked for saving)
chromosome 6:
508	10301879	10304175	17134377	5	47	1962	99.6	(marked for saving)
146	27368339	27422621	34063131	3	67	1863	96.8	(marked for saving)
125	45908409	51309836	52731352	2	20	570	20.7	(marked for saving)
110	17258689	17299154	18598198	4	27	682	18.9	(marked for saving)
107	34119529	34657343	40944886	2	4	196	91.7	(marked for saving)
21	20274449	27123066	27123131	1	1	21	0	(marked for saving)
21	3447879	10301675	10301806	1	1	21	0	(marked for saving)
chromosome 10:
491	34271	307776	4431722	4	108	3417	60.1	(marked for saving)
177	27998591	32881565	34843552	3	76	2141	28.6	(marked for saving)
chromosome 23:
236	33104821	33310188	39929492	4	94	3238	96.5	(marked for saving)
176	14222051	14254254	21047677	3	76	2543	99.1	(marked for saving)
173	3152841	3743146	5619436	3	40	1170	27.3	(marked for saving)
43	7299511	13954373	14080061	2	3	63	1.8	(marked for saving)
chromosome 13:
371	43283011	43457087	50113364	5	47	2081	97.1	(marked for saving)
239	20767621	21708560	25248023	4	57	1676	51.6	(marked for saving)
182	4489371	8993619	10788310	3	71	2024	26.1	(marked for saving)
105	479781	489205	1781533	1	10	438	18.8	(marked for saving)
96	29609281	32291564	34126380	1	14	580	26.7	(marked for saving)
24	36566091	42276696	43044308	1	4	84	11.1	(marked for saving)
chromosome 1:
574	9698411	9705364	16540496	7	132	4821	99.7	(marked for saving)
190	27655891	27699808	34472485	4	23	753	98.8	(marked for saving)
127	40164441	45625345	47012008	2	28	862	20.2	(marked for saving)
124	20767621	26671051	27511938	3	29	1018	12.2	(marked for saving)
110	2810141	3950857	9598680	3	4	130	82.4	(marked for saving)
24	16655221	16713894	18238313	1	8	172	22.2	(marked for saving)
chromosome 8:
178	45539466	46063094	48952374	3	96	2803	42.1	(marked for saving)
178	10412716	10570432	17237162	3	58	1659	97.2	(marked for saving)
170	17780766	17809049	22800015	3	47	1453	72.8	(marked for saving)
167	28987056	33468887	35143409	3	28	886	24.4	(marked for saving)
20	3661526	10309744	10309833	1	1	20	0	(marked for saving)
chromosome 24:
637	19761821	19769891	26615121	7	294	9266	99.8	(marked for saving)
130	32304641	36076381	39147902	2	8	259	44.8	(marked for saving)
42	12907821	19316164	19714494	2	4	82	5.8	(marked for saving)
23	26650091	26662175	28614014	1	11	231	28.4	(marked for saving)
chromosome 2:
290	582591	801138	6482396	4	67	2259	82.8	(marked for saving)
269	34509891	34524828	41354970	5	43	1289	99.6	(marked for saving)
246	9835491	9851561	16422369	4	23	758	95.8	(marked for saving)
160	42117831	47645691	48938249	3	113	3092	18.8	(marked for saving)
158	27655891	32289880	34471611	3	58	1720	31.8	(marked for saving)
103	20767621	25241092	26369199	2	34	938	16.4	(marked for saving)
58	16929381	17272518	17469019	1	2	77	2.8	(marked for saving)
chromosome 14:
454	32350881	35695257	39174722	5	151	5218	50.7	(marked for saving)
385	6271411	6279526	13064240	6	105	3439	98.9	(marked for saving)
206	24331701	24338288	31084130	3	84	2885	98.4	(marked for saving)
77	13091141	13129148	13813998	2	5	174	9.9	(marked for saving)
22	17443431	23771794	24170822	1	4	87	5.8	(marked for saving)
chromosome 9:
231	36257661	36282684	43107228	3	380	12529	99.5	(marked for saving)
135	4489371	5096692	9886603	2	8	377	69.8	(marked for saving)
chromosome 20:
1631	20150761	20158523	26981491	14	545	20796	99.5	(marked for saving)
375	27004761	27015328	33693642	5	105	4216	97.4	(marked for saving)
279	13296761	17871502	20112683	7	70	1908	32.6	(marked for saving)
217	49348801	49619936	56174644	3	32	1528	95.6	(marked for saving)
181	1	16016	247749	3	15	638	3.3	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
20	1631	20150761	20158523	26981491	14	545	20796	99.5	(saved)
24	637	19761821	19769891	26615121	7	294	9266	99.8	(saved)
1	574	9698411	9705364	16540496	7	132	4821	99.7	(saved)
6	508	10301879	10304175	17134377	5	47	1962	99.6	(saved)
10	491	34271	307776	4431722	4	108	3417	60.1	(saved)
14	454	32350881	35695257	39174722	5	151	5218	50.7	(saved)
14	385	6271411	6279526	13064240	6	105	3439	98.9	(saved)
20	375	27004761	27015328	33693642	5	105	4216	97.4	(saved)
13	371	43283011	43457087	50113364	5	47	2081	97.1	(saved)
5	341	60813825	60832994	67600533	4	67	2327	98.7	(saved)
5	299	45255245	45286179	52002663	5	67	2090	97.9	(saved)
2	290	582591	801138	6482396	4	67	2259	82.8	(saved)
17	284	25736771	26797807	28774665	4	66	2379	28.8	(saved)
15	280	36819418	36886739	43651496	4	31	1219	98.6	(saved)
20	279	13296761	17871502	20112683	7	70	1908	32.6	(saved)
2	269	34509891	34524828	41354970	5	43	1289	99.6	(saved)
19	268	8610766	9398850	15106665	3	28	1449	83.2	(saved)
19	261	34450346	34480809	41290676	3	51	4799	99.3	(saved)
7	259	48663401	49460010	51736510	2	28	1184	33.2	(saved)
7	246	3701161	3706937	10149675	4	62	2272	94	(saved)
2	246	9835491	9851561	16422369	4	23	758	95.8	(saved)
17	241	7299511	7572691	14128345	4	53	1607	95.6	(saved)
13	239	20767621	21708560	25248023	4	57	1676	51.6	(saved)
23	236	33104821	33310188	39929492	4	94	3238	96.5	(saved)
11	233	20767621	24829642	26264263	4	30	962	20.9	(saved)
18	231	39346537	43911103	46191711	4	42	1186	33.2	(saved)
9	231	36257661	36282684	43107228	3	380	12529	99.5	(saved)
20	217	49348801	49619936	56174644	3	32	1528	95.6	(saved)
Zv7_NA3207	209	1	41053	84661	3	43	1654	0.6	(saved)
14	206	24331701	24338288	31084130	3	84	2885	98.4	(saved)
21	202	29208936	29311590	36016531	3	153	4536	97.8	(saved)
18	200	11930537	12410173	18720316	4	39	1180	92	(saved)
18	198	20875007	22136544	27133895	2	10	383	72.9	(saved)
22	192	8464691	8533748	15296151	4	75	2074	98.6	(saved)
1	190	27655891	27699808	34472485	4	23	753	98.8	(saved)
13	182	4489371	8993619	10788310	3	71	2024	26.1	(saved)
20	181	1	16016	247749	3	15	638	3.3	(saved)
Zv7_NA3308	180	1	1701	9224	3	9	428	0.1	(saved)
8	178	45539466	46063094	48952374	3	96	2803	42.1	(saved)
8	178	10412716	10570432	17237162	3	58	1659	97.2	(saved)
Zv7_scaffold2547	177	1	9704	328498	3	15	576	4.6	(saved)
10	177	27998591	32881565	34843552	3	76	2141	28.6	(saved)
22	176	1336531	2641092	8169804	3	43	1174	80.6	(saved)
23	176	14222051	14254254	21047677	3	76	2543	99.1	(saved)
16	175	20973241	20991501	27826543	3	19	606	99.7	(saved)
7	175	10966401	11125263	17651152	3	53	1652	95.2	(saved)
23	173	3152841	3743146	5619436	3	40	1170	27.3	(saved)
25	171	6614111	6631109	13463853	3	127	3489	99.6	(saved)
8	170	17780766	17809049	22800015	3	47	1453	72.8	(saved)
8	167	28987056	33468887	35143409	3	28	886	24.4	(saved)
2	160	42117831	47645691	48938249	3	113	3092	18.8	(saved)
2	158	27655891	32289880	34471611	3	58	1720	31.8	(saved)
Zv7_NA1887	157	1	4935	78034	3	50	1353	1	(saved)
Zv7_NA1361	153	1	16920	53460	3	15	573	0.5	(saved)
Zv7_NA1005	150	1	565	85991	3	16	580	1.2	(saved)
16	150	4489371	8511421	9783639	3	15	570	18.5	(saved)
15	146	29999688	34937305	36740675	4	47	1129	26.3	(saved)
17	146	40404331	40462784	47240740	2	6	285	98.8	(saved)
6	146	27368339	27422621	34063131	3	67	1863	96.8	(saved)
Zv7_NA3755	135	1	9743	21073	3	11	386	0.1	(saved)
9	135	4489371	5096692	9886603	2	8	377	69.8
24	130	32304641	36076381	39147902	2	8	259	44.8
11	129	29609281	32489375	33250212	3	25	762	11.1
1	127	40164441	45625345	47012008	2	28	862	20.2
7	125	29609281	29671171	36356796	2	5	327	97.5
6	125	45908409	51309836	52731352	2	20	570	20.7
1	124	20767621	26671051	27511938	3	29	1018	12.2
Zv7_NA1679	120	1	1036	4523	3	11	404	0
16	116	37559921	42003331	44404024	2	29	818	35
6	110	17258689	17299154	18598198	4	27	682	18.9
1	110	2810141	3950857	9598680	3	4	130	82.4
4	108	25003308	27175889	28395113	1	18	825	17.7
6	107	34119529	34657343	40944886	2	4	196	91.7
3	106	29609281	33586744	34940272	1	5	191	19.7
12	105	40605545	45560455	47454455	1	16	753	27.6
13	105	479781	489205	1781533	1	10	438	18.8
2	103	20767621	25241092	26369199	2	34	938	16.4
16	102	14119241	15947634	20860132	2	12	448	71.6
16	102	582591	885932	1927366	1	9	423	15.1
3	100	4489371	4862608	6860656	1	29	1039	29.1
13	96	29609281	32291564	34126380	1	14	580	26.7
Zv7_NA741	88	1	145355	228771	2	17	484	1.2
Zv7_NA888	86	1	86419	88641	1	4	292	0
3	82	20767621	22255914	23126275	1	14	817	12.6
Zv7_NA1057	81	1	1901	3225	1	2	127	0
12	78	21277265	26074933	27106988	1	13	470	15
3	78	55860101	62226591	62681024	1	3	121	6.6
7	77	61103411	67424179	67944045	1	3	121	7.5
14	77	13091141	13129148	13813998	2	5	174	9.9
15	74	5599448	7312795	9139082	1	14	385	26.6
Zv7_scaffold2511	69	1	32486	34574	1	2	88	0
Zv7_NA924	68	1	55425	224104	1	3	112	2.4
11	67	34271	196116	645913	1	8	206	6.5
4	64	32919678	39527570	39754432	1	6	168	3.3
11	63	36805981	43546870	43655745	1	4	140	1.5
7	62	36360471	36558032	38660451	1	4	167	30.6
Zv7_NA6	58	1	37475	126598	1	2	80	1.3
2	58	16929381	17272518	17469019	1	2	77	2.8
Zv7_NA1622	55	1	414	977	1	1	55	0
Zv7_NA1144	55	1	39280	50175	1	2	79	0.1
3	52	43591441	44497931	45006641	1	7	224	7.4
Zv7_NA995	51	1	48204	48893	1	1	51	0
16	51	27861511	27918402	29186440	2	9	205	18.5
17	50	1	19604	1164381	1	14	378	16.7
Zv7_NA1165	49	1	7816	7941	1	1	49	0
Zv7_NA1204	49	1	6698	13790	1	2	85	0.1
15	49	13618628	15028941	15379905	1	3	115	5.1
Zv7_scaffold2637	46	1	31012	186526	1	10	291	2.2
4	45	11638008	12871458	12876920	1	4	132	0
5	43	53959825	60370171	60736794	2	4	84	5.3
23	43	7299511	13954373	14080061	2	3	63	1.8
24	42	12907821	19316164	19714494	2	4	82	5.8
Zv7_NA754	39	1	70913	141421	1	14	450	1
5	26	52006435	52426676	52426801	1	1	26	0
13	24	36566091	42276696	43044308	1	4	84	11.1
1	24	16655221	16713894	18238313	1	8	172	22.2
19	23	27596346	34038937	34431900	1	2	46	5.7
24	23	26650091	26662175	28614014	1	11	231	28.4
7	22	22618201	28978199	29315637	1	3	65	4.9
14	22	17443431	23771794	24170822	1	4	87	5.8
17	21	33550331	40373018	40373056	1	1	21	0
6	21	20274449	27123066	27123131	1	1	21	0
6	21	3447879	10301675	10301806	1	1	21	0
8	20	3661526	10309744	10309833	1	1	20	0
global files summary:
Danio_rerio.glob01.20.minQN1.fac2.01.blastresult
Danio_rerio.glob02.24.minQN1.fac2.01.blastresult
Danio_rerio.glob03.1.minQN1.fac2.01.blastresult
Danio_rerio.glob04.6.minQN1.fac2.01.blastresult
Danio_rerio.glob05.10.minQN1.fac2.01.blastresult
Danio_rerio.glob06.14.minQN1.fac2.01.blastresult
Danio_rerio.glob07.14.minQN1.fac2.02.blastresult
Danio_rerio.glob08.20.minQN1.fac2.02.blastresult
Danio_rerio.glob09.13.minQN1.fac2.01.blastresult
Danio_rerio.glob10.5.minQN1.fac2.01.blastresult
Danio_rerio.glob11.5.minQN1.fac2.02.blastresult
Danio_rerio.glob12.2.minQN1.fac2.01.blastresult
Danio_rerio.glob13.17.minQN1.fac2.01.blastresult
Danio_rerio.glob14.15.minQN1.fac2.01.blastresult
Danio_rerio.glob15.20.minQN1.fac2.03.blastresult
Danio_rerio.glob16.2.minQN1.fac2.02.blastresult
Danio_rerio.glob17.19.minQN1.fac2.01.blastresult
Danio_rerio.glob18.19.minQN1.fac2.02.blastresult
Danio_rerio.glob19.7.minQN1.fac2.01.blastresult
Danio_rerio.glob20.7.minQN1.fac2.02.blastresult
Danio_rerio.glob21.2.minQN1.fac2.03.blastresult
Danio_rerio.glob22.17.minQN1.fac2.02.blastresult
Danio_rerio.glob23.13.minQN1.fac2.02.blastresult
Danio_rerio.glob24.23.minQN1.fac2.01.blastresult
Danio_rerio.glob25.11.minQN1.fac2.01.blastresult
Danio_rerio.glob26.18.minQN1.fac2.01.blastresult
Danio_rerio.glob27.9.minQN1.fac2.01.blastresult
Danio_rerio.glob28.20.minQN1.fac2.04.blastresult
Danio_rerio.glob29.Zv7_NA3207.minQN1.fac2.01.blastresult
Danio_rerio.glob30.14.minQN1.fac2.03.blastresult
Danio_rerio.glob31.21.minQN1.fac2.01.blastresult
Danio_rerio.glob32.18.minQN1.fac2.02.blastresult
Danio_rerio.glob33.18.minQN1.fac2.03.blastresult
Danio_rerio.glob34.22.minQN1.fac2.01.blastresult
Danio_rerio.glob35.1.minQN1.fac2.02.blastresult
Danio_rerio.glob36.13.minQN1.fac2.03.blastresult
Danio_rerio.glob37.20.minQN1.fac2.05.blastresult
Danio_rerio.glob38.Zv7_NA3308.minQN1.fac2.01.blastresult
Danio_rerio.glob39.8.minQN1.fac2.01.blastresult
Danio_rerio.glob40.8.minQN1.fac2.02.blastresult
Danio_rerio.glob41.Zv7_scaffold2547.minQN1.fac2.01.blastresult
Danio_rerio.glob42.10.minQN1.fac2.02.blastresult
Danio_rerio.glob43.22.minQN1.fac2.02.blastresult
Danio_rerio.glob44.23.minQN1.fac2.02.blastresult
Danio_rerio.glob45.16.minQN1.fac2.01.blastresult
Danio_rerio.glob46.7.minQN1.fac2.03.blastresult
Danio_rerio.glob47.23.minQN1.fac2.03.blastresult
Danio_rerio.glob48.25.minQN1.fac2.01.blastresult
Danio_rerio.glob49.8.minQN1.fac2.03.blastresult
Danio_rerio.glob50.8.minQN1.fac2.04.blastresult
Danio_rerio.glob51.2.minQN1.fac2.04.blastresult
Danio_rerio.glob52.2.minQN1.fac2.05.blastresult
Danio_rerio.glob53.Zv7_NA1887.minQN1.fac2.01.blastresult
Danio_rerio.glob54.Zv7_NA1361.minQN1.fac2.01.blastresult
Danio_rerio.glob55.Zv7_NA1005.minQN1.fac2.01.blastresult
Danio_rerio.glob56.16.minQN1.fac2.02.blastresult
Danio_rerio.glob57.15.minQN1.fac2.02.blastresult
Danio_rerio.glob58.17.minQN1.fac2.03.blastresult
Danio_rerio.glob59.6.minQN1.fac2.02.blastresult
Danio_rerio.glob60.Zv7_NA3755.minQN1.fac2.01.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 1654228 nt (3'308'456 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome Zv7_NA581:
63	16544	32170	32958	1	1	63	0	(marked for saving)
chromosome Zv7_NA1695:
111	16544	32176	33063	1	1	111	0	(marked for saving)
chromosome Zv7_NA6815:
49	1	563	721	1	1	49	0	(marked for saving)
chromosome Zv7_NA472:
55	16544	97869	98063	1	1	55	0	(marked for saving)
chromosome Zv7_NA2921:
94	16544	33809	34549	1	1	94	0	(marked for saving)
chromosome Zv7_NA2911:
63	1	5912	6022	1	1	63	0	(marked for saving)
chromosome Zv7_scaffold2511:
66	16544	34359	34553	1	1	66	0	(marked for saving)
chromosome Zv7_NA6:
60	16544	114776	126598	1	2	111	0.3	(marked for saving)
chromosome Zv7_NA1921:
66	1	4191	4559	1	2	93	0	(marked for saving)
chromosome Zv7_NA1143:
79	16544	44198	58751	1	2	115	0.4	(marked for saving)
chromosome Zv7_NA7296:
60	1	193	754	1	2	90	0	(marked for saving)
chromosome Zv7_NA25:
69	16544	102308	105799	1	2	88	0.1	(marked for saving)
chromosome Zv7_NA5059:
48	1	2011	2560	1	2	73	0	(marked for saving)
chromosome Zv7_NA6673:
44	1	1833	2620	1	3	98	0	(marked for saving)
chromosome Zv7_NA3012:
58	16544	48240	52188	1	3	107	0.1	(marked for saving)
chromosome Zv7_NA1715:
65	1	8454	18878	1	3	126	0.3	(marked for saving)
chromosome Zv7_NA4018:
91	1	1682	2730	1	3	203	0	(marked for saving)
chromosome Zv7_scaffold2589:
68	16544	174031	174968	1	3	119	0	(marked for saving)
chromosome Zv7_NA7088:
48	1	5030	10170	1	4	122	0.1	(marked for saving)
chromosome Zv7_NA783:
38	16544	92587	100189	1	4	125	0.2	(marked for saving)
chromosome Zv7_NA200:
46	16544	24498	26272	1	4	134	0	(marked for saving)
chromosome Zv7_NA3755:
44	1	57	20642	1	4	137	0.6	(marked for saving)
chromosome Zv7_NA8:
61	16544	152817	210587	1	4	155	1.7	(marked for saving)
chromosome Zv7_NA1575:
37	1	15060	21328	1	4	125	0.1	(marked for saving)
chromosome Zv7_NA741:
42	16544	145472	185719	1	5	164	1.2	(marked for saving)
chromosome Zv7_scaffold2571:
86	16544	141733	196968	1	5	230	1.6	(marked for saving)
chromosome Zv7_NA1102:
263	16544	64843	91759	1	5	940	0.8	(marked for saving)
chromosome Zv7_NA18:
67	16544	85531	90858	1	5	237	0.1	(marked for saving)
chromosome Zv7_NA1005:
101	1	8699	10565	2	6	265	0	(marked for saving)
chromosome Zv7_NA1084:
64	16544	18345	22450	1	6	219	0.1	(marked for saving)
chromosome Zv7_NA22:
62	1	251	60236	1	6	196	1.8	(marked for saving)
chromosome Zv7_NA890:
67	16544	82894	172539	1	6	199	2.7	(marked for saving)
chromosome Zv7_NA612:
61	1	4139	4525	1	6	333	0	(marked for saving)
chromosome Zv7_NA1679:
74	1	665	4184	2	7	233	0.1	(marked for saving)
chromosome Zv7_NA3308:
112	1	1707	9191	2	7	287	0.2	(marked for saving)
chromosome Zv7_scaffold2619:
75	1	11048	369031	1	8	369	10.8	(marked for saving)
chromosome Zv7_NA1834:
103	16544	20619	48362	1	8	605	0.8	(marked for saving)
chromosome Zv7_NA3168:
42	1	2530	9339	1	9	344	0.2	(marked for saving)
chromosome Zv7_NA903:
62	16544	71497	119054	1	9	351	1.4	(marked for saving)
chromosome Zv7_NA1452:
65	1	1093	16375	1	10	487	0.4	(marked for saving)
chromosome Zv7_NA701:
68	1	11478	11732	1	10	609	0	(marked for saving)
chromosome Zv7_NA1361:
100	1	5056	68316	2	11	407	1.9	(marked for saving)
chromosome Zv7_scaffold2576:
123	16544	52939	227186	1	11	1091	5.2	(marked for saving)
chromosome Zv7_NA3608:
60	1	2305	24413	1	12	535	0.6	(marked for saving)
chromosome Zv7_NA229:
82	16544	18988	190235	1	12	811	5.1	(marked for saving)
chromosome Zv7_scaffold2547:
114	16544	24282	171888	2	12	409	4.4	(marked for saving)
chromosome Zv7_NA576:
72	1	6280	38700	1	12	714	0.9	(marked for saving)
chromosome Zv7_NA402:
50	1	6633	128521	1	13	520	3.6	(marked for saving)
chromosome Zv7_NA989:
46	16544	27741	157014	1	13	508	3.9	(marked for saving)
chromosome Zv7_NA757:
52	16544	46115	121995	1	15	605	2.2	(marked for saving)
chromosome Zv7_NA1929:
51	16544	36125	38218	1	15	578	0	(marked for saving)
chromosome Zv7_NA289:
57	16544	55656	356251	1	18	672	9	(marked for saving)
chromosome Zv7_NA938:
146	16544	35212	155521	2	18	708	3.6	(marked for saving)
chromosome Zv7_NA711:
67	1	4228	38513	1	19	907	1	(marked for saving)
chromosome Zv7_NA122:
61	16544	51962	343581	1	21	638	8.8	(marked for saving)
chromosome Zv7_NA681:
64	16544	161541	229365	1	22	1048	2	(marked for saving)
chromosome Zv7_NA1887:
103	16544	20800	73422	2	24	651	1.5	(marked for saving)
chromosome Zv7_NA2234:
61	1	7825	13733	1	26	1025	0.1	(marked for saving)
chromosome Zv7_scaffold2573:
93	1	12821	135042	1	26	1309	3.6	(marked for saving)
chromosome Zv7_scaffold2495:
62	16544	156138	245806	1	29	1259	2.7	(marked for saving)
chromosome Zv7_NA2935:
93	1	13469	23393	1	33	2191	0.2	(marked for saving)
chromosome Zv7_NA3207:
269	1	8346	84661	3	46	2248	2.3	(marked for saving)
chromosome Zv7_NA240:
117	16544	60056	521758	1	70	3472	13.9	(marked for saving)
chromosome 25:
379	14840737	14922822	18101843	2	20	2030	96	(marked for saving)
186	4137416	4153820	7435334	3	65	1679	99.1	(marked for saving)
108	8455139	8465443	11716138	2	52	1538	98.2	(marked for saving)
94	29348948	30678330	32652170	1	33	1470	59.6	(marked for saving)
84	21160163	21204667	24413166	1	58	2891	96.9	(marked for saving)
21	24435677	24591758	24591844	1	1	21	0	(marked for saving)
20	746101	4021288	4021470	1	1	20	0	(marked for saving)
chromosome 19:
188	7245835	7289959	10548492	2	32	1994	98.4	(marked for saving)
164	42614769	45755989	45920799	1	23	2391	4.9	(marked for saving)
163	2084419	2608464	4837702	1	97	6550	67.3	(marked for saving)
147	26154484	26190171	29258230	2	6	366	92.7	(marked for saving)
130	38115073	38248211	41200549	2	12	427	89.2	(marked for saving)
85	12473423	12513277	12907984	1	44	2112	11.9	(marked for saving)
77	29909745	30863780	31362026	1	5	176	15	(marked for saving)
76	15715851	17658758	17679350	1	15	987	0.6	(marked for saving)
56	20794552	21728283	22320951	1	18	820	17.9	(marked for saving)
21	22845884	25768085	25768141	1	1	21	0	(marked for saving)
20	41638732	41793344	41793475	1	1	20	0	(marked for saving)
chromosome 3:
216	10211442	10220841	13475107	3	61	2379	98.3	(marked for saving)
174	33305470	33784178	36579854	2	24	1050	84.5	(marked for saving)
138	51916345	54226771	55214104	2	15	595	29.8	(marked for saving)
131	28425285	29430830	30868373	2	13	633	43.4	(marked for saving)
123	6274208	6637959	7050777	1	17	1233	12.4	(marked for saving)
90	13486956	13579864	15765921	2	114	4378	66	(marked for saving)
84	40418960	42088592	43158716	1	12	414	32.3	(marked for saving)
71	20567360	23026735	23591909	1	11	697	17	(marked for saving)
69	17738507	18238378	18248833	1	14	616	0.3	(marked for saving)
chromosome 4:
379	13891691	13948004	16416489	3	66	3326	74.6	(marked for saving)
326	3287628	3485952	6017492	2	44	2272	76.5	(marked for saving)
266	38656562	39610580	41950820	1	48	2515	70.7	(marked for saving)
244	32502566	33081865	35665151	1	64	3303	78	(marked for saving)
86	20525434	20549551	23824000	2	22	767	98.9	(marked for saving)
56	17051404	18987714	20332289	1	44	1472	40.6	(marked for saving)
23	23850577	23941595	24669377	1	12	253	21.9	(marked for saving)
chromosome 10:
453	1	61768	3261269	4	88	3523	96.7	(marked for saving)
220	31365529	31392772	34602442	4	53	1674	97	(marked for saving)
140	28040386	28172779	31263680	2	105	3408	93.4	(marked for saving)
113	37536068	39449199	40843366	1	40	1427	42.1	(marked for saving)
45	3358230	3413223	5817942	2	17	366	72.6	(marked for saving)
23	24847587	27240579	27863914	1	4	86	18.8	(marked for saving)
chromosome 9:
285	1207640	1373801	4114518	4	43	1692	82.8	(marked for saving)
207	33449947	33454398	36701624	3	10	365	98.1	(marked for saving)
179	36758547	36771153	40060088	3	9	308	99.4	(marked for saving)
170	40331835	40436347	40654290	2	27	2093	6.5	(marked for saving)
129	24169324	24181733	27446413	2	97	3789	98.6	(marked for saving)
124	30091718	32630778	33381901	1	62	3094	22.7	(marked for saving)
120	19305682	19355803	22540588	2	44	1463	96.2	(marked for saving)
120	12473423	14646768	15290094	2	16	414	19.4	(marked for saving)
63	41638732	44589456	44657400	1	3	146	2	(marked for saving)
57	48024330	51326224	51327283	1	12	505	0	(marked for saving)
33	27511010	27542601	28442611	1	4	93	27.2	(marked for saving)
23	15897824	19006263	19174794	1	2	44	5	(marked for saving)
chromosome 20:
427	27279408	27307190	30586241	4	48	2859	99.1	(marked for saving)
404	18346188	18424222	21609214	5	166	6790	96.2	(marked for saving)
351	1	16043	2595621	4	42	2184	77.9	(marked for saving)
307	22713540	22717850	26021989	4	61	2344	99.8	(marked for saving)
188	7328550	8682264	9988936	2	18	1202	39.4	(marked for saving)
96	48272475	50792711	51573937	2	16	483	23.6	(marked for saving)
56	37254837	38003978	38004354	1	3	111	0	(marked for saving)
22	14987959	17865082	18051993	1	2	43	5.6	(marked for saving)
chromosome 15:
401	22597739	22608321	25892748	3	43	3730	99.2	(marked for saving)
339	36014112	36039557	39313335	3	116	5202	98.9	(marked for saving)
206	40761953	41738345	44058815	3	61	2399	70.1	(marked for saving)
142	7328550	7371797	8942612	2	46	1940	47.4	(marked for saving)
113	18346188	20111476	21280593	1	11	566	35.3	(marked for saving)
91	26319914	26325018	29620991	2	18	736	99.6	(marked for saving)
55	31646760	31934127	34307512	1	70	2566	71.7	(marked for saving)
55	1	16735	279806	1	8	253	7.9	(marked for saving)
chromosome 17:
292	39438513	39566037	42659182	3	40	2553	93.4	(marked for saving)
254	13614890	13689658	16726087	4	40	1710	91.7	(marked for saving)
190	27626811	27642086	30896663	4	41	1367	98.3	(marked for saving)
135	4797471	4821957	8065712	2	96	5160	98	(marked for saving)
132	959495	989002	4222039	2	22	852	97.7	(marked for saving)
102	20794552	22623107	23858212	2	78	2536	37.3	(marked for saving)
81	35981026	36283612	39053424	2	8	228	83.7	(marked for saving)
76	30918868	31964545	32914501	1	12	316	28.7	(marked for saving)
70	42813285	43026945	44834780	1	8	237	54.6	(marked for saving)
52	48470991	51701025	51770732	1	31	1279	2.1	(marked for saving)
44	8188786	8468360	8827405	1	8	238	10.8	(marked for saving)
26	24285125	26727279	27583110	1	3	70	25.8	(marked for saving)
chromosome 12:
639	29297654	29308252	32600676	4	63	2924	99.5	(marked for saving)
459	23557233	23587315	26845329	3	94	5952	98.4	(marked for saving)
263	82716	92898	3321213	3	56	2344	97.5	(marked for saving)
231	4847100	4874489	8000494	2	72	6660	94.4	(marked for saving)
187	17552124	17808012	20709372	2	23	1057	87.6	(marked for saving)
162	32606254	32614542	34578489	2	48	1445	59.3	(marked for saving)
130	37254837	37527340	38093032	1	4	211	17	(marked for saving)
58	10223575	10913431	11832526	1	16	676	27.7	(marked for saving)
55	43160688	45796005	46462252	1	9	259	20.1	(marked for saving)
49	40034061	41242362	42017681	1	6	187	23.4	(marked for saving)
chromosome 6:
376	52457854	52637913	55728948	4	30	2426	93.4	(marked for saving)
319	26154484	26290873	29426364	5	125	4220	94.7	(marked for saving)
310	15136846	15297565	18347025	3	27	868	92.1	(marked for saving)
136	49083082	51059574	52286734	2	15	482	37	(marked for saving)
126	29909745	30019469	33209675	3	15	489	96.4	(marked for saving)
125	7328550	9190483	9974504	2	13	579	23.6	(marked for saving)
73	19305682	19314427	20867160	1	132	5490	46.9	(marked for saving)
72	992581	1111963	4299605	1	6	273	96.3	(marked for saving)
68	44451042	46330928	46861948	1	21	891	16	(marked for saving)
67	4433525	4787641	5666869	1	16	840	26.5	(marked for saving)
60	10968010	12633700	13639945	1	10	281	30.4	(marked for saving)
25	33449947	33556753	33747722	1	3	71	5.7	(marked for saving)
chromosome 18:
328	10968010	11885826	13719114	4	74	2803	55.4	(marked for saving)
223	18131129	18131518	21427710	2	26	2072	99.6	(marked for saving)
179	14822529	16175722	18128774	2	73	3252	59	(marked for saving)
174	1786645	1818523	5049425	2	32	1356	97.6	(marked for saving)
136	41638732	41807420	44913745	2	18	988	93.8	(marked for saving)
135	31530959	31610835	34831439	3	27	1090	97.3	(marked for saving)
123	35153876	35154403	37919621	2	75	3076	83.5	(marked for saving)
92	5062159	5122921	7284152	2	17	448	65.3	(marked for saving)
66	38115073	40324970	41261263	1	69	3126	28.3	(marked for saving)
20	28040386	31084296	31084370	1	1	20	0	(marked for saving)
chromosome 24:
335	22746626	22755146	26051859	5	94	3947	99.6	(marked for saving)
259	19305682	20007287	22410837	5	95	2860	72.6	(marked for saving)
170	36775090	39756926	40080422	2	17	1377	9.7	(marked for saving)
168	1852817	1872543	4913087	1	153	8798	91.9	(marked for saving)
150	12473423	12826531	15359890	1	51	2807	76.5	(marked for saving)
130	33846979	34951663	36532885	2	5	193	47.7	(marked for saving)
61	29909745	31607186	31771049	1	18	793	4.9	(marked for saving)
58	15715851	16869675	17791771	1	20	893	27.8	(marked for saving)
51	7328550	8131370	8131845	1	11	452	0	(marked for saving)
23	26154484	26165880	27219798	1	7	148	31.8	(marked for saving)
chromosome 5:
346	16245227	16247629	19538396	4	45	1908	99.4	(marked for saving)
344	60266150	60440099	63417921	5	88	3354	90	(marked for saving)
217	1	216997	1890084	2	42	2367	50.5	(marked for saving)
195	65212507	65755574	68514504	3	30	1228	83.3	(marked for saving)
192	56659776	57095641	59956970	3	38	2141	86.4	(marked for saving)
160	47726556	47730621	51030711	3	49	1492	99.7	(marked for saving)
145	28602848	29610206	31702386	1	56	3110	63.2	(marked for saving)
136	21919476	21948252	25219095	3	10	358	98.8	(marked for saving)
125	12886998	13118182	16126650	3	42	1246	90.9	(marked for saving)
123	51068242	51314019	54319818	3	62	3622	90.8	(marked for saving)
69	25310791	25344653	27311383	2	5	164	59.4	(marked for saving)
50	40034061	40715349	40730425	1	4	140	0.4	(marked for saving)
chromosome 1:
560	14337509	14475691	17001220	4	77	3261	76.3	(marked for saving)
261	25073916	25135723	28371094	5	55	1776	97.7	(marked for saving)
242	52899242	53269561	56200015	1	230	13466	88.5	(marked for saving)
221	8911405	9018419	12206289	3	41	1546	96.3	(marked for saving)
208	38837692	38846758	41011261	3	23	1204	65.4	(marked for saving)
145	44958602	46313177	47936915	2	12	360	49	(marked for saving)
142	32336293	32619627	35472325	2	49	2026	86.2	(marked for saving)
64	5503547	5767920	8548854	2	6	182	84	(marked for saving)
23	21715687	24738211	24738438	1	1	23	0	(marked for saving)
chromosome 14:
827	53169203	53186909	56477193	6	62	3805	99.4	(marked for saving)
745	20232090	20240627	23413232	5	120	4663	95.8	(marked for saving)
285	35153876	36054866	38460105	4	90	3248	72.6	(marked for saving)
246	23706120	23887512	26213113	4	44	1754	70.2	(marked for saving)
208	7709039	7899988	10950726	2	9	1176	92.2	(marked for saving)
162	49761345	51365168	52920206	2	39	2280	47	(marked for saving)
156	43524634	43671953	46759396	2	37	1861	93.3	(marked for saving)
136	10968010	11563402	12774271	2	38	1198	36.5	(marked for saving)
105	16807689	18067633	20009197	2	11	781	58.6	(marked for saving)
103	330861	1187651	2556352	2	7	246	41.3	(marked for saving)
101	29909745	30009531	31356675	2	28	783	40.7	(marked for saving)
37	4433525	5079395	5327669	1	5	161	7.5	(marked for saving)
21	40331835	42986979	43443932	1	4	79	13.8	(marked for saving)
chromosome 11:
253	31646760	32273570	34858619	4	53	2238	78.1	(marked for saving)
189	41092813	41172688	44387537	3	88	3650	97.1	(marked for saving)
182	1	62641	2944826	3	120	4048	87.1	(marked for saving)
169	18098043	18099578	21276628	2	55	1794	96	(marked for saving)
141	14673642	15529836	17964766	2	46	1991	73.5	(marked for saving)
131	36427687	36456110	39718181	2	92	3536	98.5	(marked for saving)
118	24020437	24170022	26686836	2	26	775	76	(marked for saving)
79	4433525	4691064	5212928	1	9	269	15.7	(marked for saving)
chromosome 7:
1077	55634110	55773227	58825258	5	88	5684	92.2	(marked for saving)
476	65212507	65471280	68507616	6	40	2028	91.7	(marked for saving)
249	24533270	24704375	27756251	2	56	3496	92.2	(marked for saving)
237	9065565	9113673	12337034	3	41	1855	97.4	(marked for saving)
202	33284517	33372409	36558217	2	29	2154	96.2	(marked for saving)
179	4847100	4974972	8048176	3	26	1106	92.8	(marked for saving)
178	36593117	36871347	38092215	3	33	1507	36.9	(marked for saving)
153	40034061	40194196	42882479	2	15	561	81.2	(marked for saving)
142	61953536	62329918	65190298	3	14	480	86.4	(marked for saving)
102	15715851	15792103	16780963	2	13	428	29.8	(marked for saving)
90	44451042	46338390	46537410	1	2	111	6	(marked for saving)
80	58843452	59189089	61737743	2	41	1749	77	(marked for saving)
68	330861	1918474	2330634	1	5	167	12.4	(marked for saving)
63	28040386	28114136	29306123	1	20	706	36	(marked for saving)
56	20794552	21520758	22374831	1	99	4068	25.8	(marked for saving)
50	52110451	54085103	54092071	1	14	636	0.2	(marked for saving)
chromosome 13:
1120	23871550	23881065	27175667	8	78	3861	99.5	(marked for saving)
505	39173825	39190571	42475761	2	150	12475	99.2	(marked for saving)
280	2084419	2708088	4884519	3	111	4934	65.7	(marked for saving)
280	13614890	14003000	16574417	2	34	2451	77.7	(marked for saving)
197	7229292	7313282	10508514	3	45	1629	96.5	(marked for saving)
181	20513321	21754529	23707654	3	52	1964	59	(marked for saving)
141	27279408	27282609	30122876	5	27	723	85.8	(marked for saving)
137	46800148	46962155	50076613	3	28	868	94.1	(marked for saving)
54	30918868	31633160	32192365	1	15	600	16.9	(marked for saving)
25	42498968	42502170	43142901	1	5	106	19.3	(marked for saving)
20	10587521	10762303	10762353	1	1	20	0	(marked for saving)
chromosome 23:
359	34905731	34908892	38210768	6	60	2608	99.8	(marked for saving)
235	3176257	3322002	6460341	4	136	4220	94.8	(marked for saving)
230	18428903	18432500	21656271	4	58	2187	97.4	(marked for saving)
178	12192192	12231980	15434016	3	82	2890	96.7	(marked for saving)
168	38214331	38246557	40237380	4	56	1715	60.1	(marked for saving)
140	23342174	23355702	26645176	2	63	2240	99.4	(marked for saving)
133	30753438	30779594	34052809	2	30	1395	98.9	(marked for saving)
103	26650774	26651391	27281511	2	42	1698	19	(marked for saving)
82	43028344	45614883	46322196	1	25	1395	21.3	(marked for saving)
23	1	1629134	2836446	1	4	86	36.4	(marked for saving)
chromosome 16:
501	16179055	16206424	19459813	7	65	3808	98.3	(marked for saving)
317	4549326	5243121	7843155	2	44	3044	78.5	(marked for saving)
263	12688482	12706227	15986938	4	65	2356	99.1	(marked for saving)
255	760979	821012	4068156	3	179	9264	98.1	(marked for saving)
237	8188786	9003925	10347743	3	89	5899	40.6	(marked for saving)
229	24996474	25168938	27835187	2	102	9233	80.5	(marked for saving)
181	40447636	40841196	43749911	3	45	1705	87.9	(marked for saving)
68	37254837	39107638	39107898	1	5	321	0	(marked for saving)
63	49215426	52473122	52516213	1	47	2163	1.3	(marked for saving)
23	19553827	19609195	19931639	1	3	67	9.7	(marked for saving)
chromosome 21:
978	10471720	10606765	13715415	4	96	4684	93.9	(marked for saving)
853	33598834	33607131	36894679	8	138	6049	99.3	(marked for saving)
817	41456759	41625756	44754339	3	67	2909	94.5	(marked for saving)
194	29843573	29847044	33116873	4	68	2007	98.8	(marked for saving)
152	16112883	16129529	19378620	3	70	2662	98.2	(marked for saving)
92	1	249542	1649022	1	139	5088	42.3	(marked for saving)
87	19553827	19571069	22426300	2	34	1053	86.3	(marked for saving)
65	6997690	9113727	10267820	2	12	310	34.8	(marked for saving)
64	38115073	41200324	41200638	1	1	64	0	(marked for saving)
43	36957063	37077831	37788127	2	10	208	21.4	(marked for saving)
chromosome 8:
329	17419780	17422382	20653644	5	40	1658	97.6	(marked for saving)
289	21555530	21652342	24844330	5	460	15007	96.4	(marked for saving)
210	30488750	30541998	33785988	4	24	1144	98	(marked for saving)
164	314318	327502	3530769	2	61	3107	96.8	(marked for saving)
164	51878849	54307677	55177008	3	23	808	26.2	(marked for saving)
160	44682644	44717539	47976257	3	97	3195	98.4	(marked for saving)
133	3556746	3715409	5416773	2	32	1115	51.4	(marked for saving)
119	9214452	9476975	11583169	2	26	746	63.6	(marked for saving)
119	47991244	48045825	48391665	2	16	524	10.4	(marked for saving)
118	27031263	29654930	30303773	2	29	965	19.6	(marked for saving)
75	24996474	25021053	25274217	2	3	96	7.6	(marked for saving)
51	33846979	33877654	34568203	2	4	94	20.8	(marked for saving)
42	14078094	16964702	17349397	2	2	42	11.6	(marked for saving)
22	41340958	44498650	44556967	1	2	44	1.7	(marked for saving)
chromosome 2:
393	24599442	24602737	27885460	5	81	3187	99.2	(marked for saving)
380	30786524	30797845	34046416	3	127	7539	98.1	(marked for saving)
361	380490	424656	3647255	3	88	6555	97.4	(marked for saving)
319	15318819	15321218	18611197	5	147	5711	99.4	(marked for saving)
310	34574871	34635139	37870900	4	68	3297	97.8	(marked for saving)
215	46386573	47653433	49687591	3	102	6690	61.4	(marked for saving)
198	3722176	3818723	6212750	3	61	2401	72.3	(marked for saving)
151	38958766	39485451	39849921	1	53	3120	11	(marked for saving)
105	18627419	18641185	20339602	3	24	941	51.3	(marked for saving)
105	11960590	12216204	15255210	2	14	480	91.8	(marked for saving)
80	7328550	7430076	7436153	1	18	1125	0.1	(marked for saving)
74	21075783	22207298	24379210	2	17	602	65.6	(marked for saving)
chromosome 22:
360	215060	265256	3521649	3	590	23678	98.4	(marked for saving)
335	6584115	6662079	9314694	5	178	8281	80.1	(marked for saving)
188	18346188	18792596	21283242	2	25	1180	75.2	(marked for saving)
72	12473423	13055376	13980199	1	20	1186	27.9	(marked for saving)
50	35617080	38912533	38916381	1	22	686	0.1	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
13	1120	23871550	23881065	27175667	8	78	3861	99.5	(saved)
7	1077	55634110	55773227	58825258	5	88	5684	92.2	(saved)
21	978	10471720	10606765	13715415	4	96	4684	93.9	(saved)
21	853	33598834	33607131	36894679	8	138	6049	99.3	(saved)
14	827	53169203	53186909	56477193	6	62	3805	99.4	(saved)
21	817	41456759	41625756	44754339	3	67	2909	94.5	(saved)
14	745	20232090	20240627	23413232	5	120	4663	95.8	(saved)
12	639	29297654	29308252	32600676	4	63	2924	99.5	(saved)
1	560	14337509	14475691	17001220	4	77	3261	76.3	(saved)
13	505	39173825	39190571	42475761	2	150	12475	99.2	(saved)
16	501	16179055	16206424	19459813	7	65	3808	98.3	(saved)
7	476	65212507	65471280	68507616	6	40	2028	91.7	(saved)
12	459	23557233	23587315	26845329	3	94	5952	98.4	(saved)
10	453	1	61768	3261269	4	88	3523	96.7	(saved)
20	427	27279408	27307190	30586241	4	48	2859	99.1	(saved)
20	404	18346188	18424222	21609214	5	166	6790	96.2	(saved)
15	401	22597739	22608321	25892748	3	43	3730	99.2	(saved)
2	393	24599442	24602737	27885460	5	81	3187	99.2	(saved)
2	380	30786524	30797845	34046416	3	127	7539	98.1	(saved)
25	379	14840737	14922822	18101843	2	20	2030	96	(saved)
4	379	13891691	13948004	16416489	3	66	3326	74.6	(saved)
6	376	52457854	52637913	55728948	4	30	2426	93.4	(saved)
2	361	380490	424656	3647255	3	88	6555	97.4	(saved)
22	360	215060	265256	3521649	3	590	23678	98.4	(saved)
23	359	34905731	34908892	38210768	6	60	2608	99.8	(saved)
20	351	1	16043	2595621	4	42	2184	77.9	(saved)
5	346	16245227	16247629	19538396	4	45	1908	99.4	(saved)
5	344	60266150	60440099	63417921	5	88	3354	90	(saved)
15	339	36014112	36039557	39313335	3	116	5202	98.9	(saved)
24	335	22746626	22755146	26051859	5	94	3947	99.6	(saved)
22	335	6584115	6662079	9314694	5	178	8281	80.1	(saved)
8	329	17419780	17422382	20653644	5	40	1658	97.6	(saved)
18	328	10968010	11885826	13719114	4	74	2803	55.4	(saved)
4	326	3287628	3485952	6017492	2	44	2272	76.5	(saved)
6	319	26154484	26290873	29426364	5	125	4220	94.7	(saved)
2	319	15318819	15321218	18611197	5	147	5711	99.4	(saved)
16	317	4549326	5243121	7843155	2	44	3044	78.5	(saved)
6	310	15136846	15297565	18347025	3	27	868	92.1	(saved)
2	310	34574871	34635139	37870900	4	68	3297	97.8	(saved)
20	307	22713540	22717850	26021989	4	61	2344	99.8	(saved)
17	292	39438513	39566037	42659182	3	40	2553	93.4	(saved)
8	289	21555530	21652342	24844330	5	460	15007	96.4	(saved)
9	285	1207640	1373801	4114518	4	43	1692	82.8	(saved)
14	285	35153876	36054866	38460105	4	90	3248	72.6	(saved)
13	280	2084419	2708088	4884519	3	111	4934	65.7	(saved)
13	280	13614890	14003000	16574417	2	34	2451	77.7	(saved)
Zv7_NA3207	269	1	8346	84661	3	46	2248	2.3	(saved)
4	266	38656562	39610580	41950820	1	48	2515	70.7	(saved)
Zv7_NA1102	263	16544	64843	91759	1	5	940	0.8	(saved)
12	263	82716	92898	3321213	3	56	2344	97.5	(saved)
16	263	12688482	12706227	15986938	4	65	2356	99.1	(saved)
1	261	25073916	25135723	28371094	5	55	1776	97.7	(saved)
24	259	19305682	20007287	22410837	5	95	2860	72.6	(saved)
16	255	760979	821012	4068156	3	179	9264	98.1	(saved)
17	254	13614890	13689658	16726087	4	40	1710	91.7	(saved)
11	253	31646760	32273570	34858619	4	53	2238	78.1	(saved)
7	249	24533270	24704375	27756251	2	56	3496	92.2	(saved)
14	246	23706120	23887512	26213113	4	44	1754	70.2	(saved)
4	244	32502566	33081865	35665151	1	64	3303	78	(saved)
1	242	52899242	53269561	56200015	1	230	13466	88.5	(saved)
7	237	9065565	9113673	12337034	3	41	1855	97.4
16	237	8188786	9003925	10347743	3	89	5899	40.6
23	235	3176257	3322002	6460341	4	136	4220	94.8
12	231	4847100	4874489	8000494	2	72	6660	94.4
23	230	18428903	18432500	21656271	4	58	2187	97.4
16	229	24996474	25168938	27835187	2	102	9233	80.5
18	223	18131129	18131518	21427710	2	26	2072	99.6
1	221	8911405	9018419	12206289	3	41	1546	96.3
10	220	31365529	31392772	34602442	4	53	1674	97
5	217	1	216997	1890084	2	42	2367	50.5
3	216	10211442	10220841	13475107	3	61	2379	98.3
2	215	46386573	47653433	49687591	3	102	6690	61.4
8	210	30488750	30541998	33785988	4	24	1144	98
1	208	38837692	38846758	41011261	3	23	1204	65.4
14	208	7709039	7899988	10950726	2	9	1176	92.2
9	207	33449947	33454398	36701624	3	10	365	98.1
15	206	40761953	41738345	44058815	3	61	2399	70.1
7	202	33284517	33372409	36558217	2	29	2154	96.2
2	198	3722176	3818723	6212750	3	61	2401	72.3
13	197	7229292	7313282	10508514	3	45	1629	96.5
5	195	65212507	65755574	68514504	3	30	1228	83.3
21	194	29843573	29847044	33116873	4	68	2007	98.8
5	192	56659776	57095641	59956970	3	38	2141	86.4
17	190	27626811	27642086	30896663	4	41	1367	98.3
11	189	41092813	41172688	44387537	3	88	3650	97.1
19	188	7245835	7289959	10548492	2	32	1994	98.4
20	188	7328550	8682264	9988936	2	18	1202	39.4
22	188	18346188	18792596	21283242	2	25	1180	75.2
12	187	17552124	17808012	20709372	2	23	1057	87.6
25	186	4137416	4153820	7435334	3	65	1679	99.1
11	182	1	62641	2944826	3	120	4048	87.1
13	181	20513321	21754529	23707654	3	52	1964	59
16	181	40447636	40841196	43749911	3	45	1705	87.9
9	179	36758547	36771153	40060088	3	9	308	99.4
18	179	14822529	16175722	18128774	2	73	3252	59
7	179	4847100	4974972	8048176	3	26	1106	92.8
7	178	36593117	36871347	38092215	3	33	1507	36.9
23	178	12192192	12231980	15434016	3	82	2890	96.7
3	174	33305470	33784178	36579854	2	24	1050	84.5
18	174	1786645	1818523	5049425	2	32	1356	97.6
9	170	40331835	40436347	40654290	2	27	2093	6.5
24	170	36775090	39756926	40080422	2	17	1377	9.7
11	169	18098043	18099578	21276628	2	55	1794	96
24	168	1852817	1872543	4913087	1	153	8798	91.9
23	168	38214331	38246557	40237380	4	56	1715	60.1
19	164	42614769	45755989	45920799	1	23	2391	4.9
8	164	314318	327502	3530769	2	61	3107	96.8
8	164	51878849	54307677	55177008	3	23	808	26.2
19	163	2084419	2608464	4837702	1	97	6550	67.3
12	162	32606254	32614542	34578489	2	48	1445	59.3
14	162	49761345	51365168	52920206	2	39	2280	47
5	160	47726556	47730621	51030711	3	49	1492	99.7
8	160	44682644	44717539	47976257	3	97	3195	98.4
14	156	43524634	43671953	46759396	2	37	1861	93.3
7	153	40034061	40194196	42882479	2	15	561	81.2
21	152	16112883	16129529	19378620	3	70	2662	98.2
2	151	38958766	39485451	39849921	1	53	3120	11
24	150	12473423	12826531	15359890	1	51	2807	76.5
19	147	26154484	26190171	29258230	2	6	366	92.7
Zv7_NA938	146	16544	35212	155521	2	18	708	3.6
5	145	28602848	29610206	31702386	1	56	3110	63.2
1	145	44958602	46313177	47936915	2	12	360	49
15	142	7328550	7371797	8942612	2	46	1940	47.4
1	142	32336293	32619627	35472325	2	49	2026	86.2
7	142	61953536	62329918	65190298	3	14	480	86.4
11	141	14673642	15529836	17964766	2	46	1991	73.5
13	141	27279408	27282609	30122876	5	27	723	85.8
10	140	28040386	28172779	31263680	2	105	3408	93.4
23	140	23342174	23355702	26645176	2	63	2240	99.4
3	138	51916345	54226771	55214104	2	15	595	29.8
13	137	46800148	46962155	50076613	3	28	868	94.1
6	136	49083082	51059574	52286734	2	15	482	37
18	136	41638732	41807420	44913745	2	18	988	93.8
5	136	21919476	21948252	25219095	3	10	358	98.8
14	136	10968010	11563402	12774271	2	38	1198	36.5
17	135	4797471	4821957	8065712	2	96	5160	98
18	135	31530959	31610835	34831439	3	27	1090	97.3
23	133	30753438	30779594	34052809	2	30	1395	98.9
8	133	3556746	3715409	5416773	2	32	1115	51.4
17	132	959495	989002	4222039	2	22	852	97.7
3	131	28425285	29430830	30868373	2	13	633	43.4
11	131	36427687	36456110	39718181	2	92	3536	98.5
19	130	38115073	38248211	41200549	2	12	427	89.2
12	130	37254837	37527340	38093032	1	4	211	17
24	130	33846979	34951663	36532885	2	5	193	47.7
9	129	24169324	24181733	27446413	2	97	3789	98.6
6	126	29909745	30019469	33209675	3	15	489	96.4
6	125	7328550	9190483	9974504	2	13	579	23.6
5	125	12886998	13118182	16126650	3	42	1246	90.9
9	124	30091718	32630778	33381901	1	62	3094	22.7
Zv7_scaffold2576	123	16544	52939	227186	1	11	1091	5.2
3	123	6274208	6637959	7050777	1	17	1233	12.4
18	123	35153876	35154403	37919621	2	75	3076	83.5
5	123	51068242	51314019	54319818	3	62	3622	90.8
9	120	19305682	19355803	22540588	2	44	1463	96.2
9	120	12473423	14646768	15290094	2	16	414	19.4
8	119	9214452	9476975	11583169	2	26	746	63.6
8	119	47991244	48045825	48391665	2	16	524	10.4
11	118	24020437	24170022	26686836	2	26	775	76
8	118	27031263	29654930	30303773	2	29	965	19.6
Zv7_NA240	117	16544	60056	521758	1	70	3472	13.9
Zv7_scaffold2547	114	16544	24282	171888	2	12	409	4.4
10	113	37536068	39449199	40843366	1	40	1427	42.1
15	113	18346188	20111476	21280593	1	11	566	35.3
Zv7_NA3308	112	1	1707	9191	2	7	287	0.2
Zv7_NA1695	111	16544	32176	33063	1	1	111	0
25	108	8455139	8465443	11716138	2	52	1538	98.2
14	105	16807689	18067633	20009197	2	11	781	58.6
2	105	18627419	18641185	20339602	3	24	941	51.3
2	105	11960590	12216204	15255210	2	14	480	91.8
Zv7_NA1834	103	16544	20619	48362	1	8	605	0.8
Zv7_NA1887	103	16544	20800	73422	2	24	651	1.5
14	103	330861	1187651	2556352	2	7	246	41.3
23	103	26650774	26651391	27281511	2	42	1698	19
17	102	20794552	22623107	23858212	2	78	2536	37.3
7	102	15715851	15792103	16780963	2	13	428	29.8
Zv7_NA1005	101	1	8699	10565	2	6	265	0
14	101	29909745	30009531	31356675	2	28	783	40.7
Zv7_NA1361	100	1	5056	68316	2	11	407	1.9
20	96	48272475	50792711	51573937	2	16	483	23.6
Zv7_NA2921	94	16544	33809	34549	1	1	94	0
25	94	29348948	30678330	32652170	1	33	1470	59.6
Zv7_scaffold2573	93	1	12821	135042	1	26	1309	3.6
Zv7_NA2935	93	1	13469	23393	1	33	2191	0.2
18	92	5062159	5122921	7284152	2	17	448	65.3
21	92	1	249542	1649022	1	139	5088	42.3
Zv7_NA4018	91	1	1682	2730	1	3	203	0
15	91	26319914	26325018	29620991	2	18	736	99.6
3	90	13486956	13579864	15765921	2	114	4378	66
7	90	44451042	46338390	46537410	1	2	111	6
21	87	19553827	19571069	22426300	2	34	1053	86.3
Zv7_scaffold2571	86	16544	141733	196968	1	5	230	1.6
4	86	20525434	20549551	23824000	2	22	767	98.9
19	85	12473423	12513277	12907984	1	44	2112	11.9
25	84	21160163	21204667	24413166	1	58	2891	96.9
3	84	40418960	42088592	43158716	1	12	414	32.3
Zv7_NA229	82	16544	18988	190235	1	12	811	5.1
23	82	43028344	45614883	46322196	1	25	1395	21.3
17	81	35981026	36283612	39053424	2	8	228	83.7
7	80	58843452	59189089	61737743	2	41	1749	77
2	80	7328550	7430076	7436153	1	18	1125	0.1
Zv7_NA1143	79	16544	44198	58751	1	2	115	0.4
11	79	4433525	4691064	5212928	1	9	269	15.7
19	77	29909745	30863780	31362026	1	5	176	15
19	76	15715851	17658758	17679350	1	15	987	0.6
17	76	30918868	31964545	32914501	1	12	316	28.7
Zv7_scaffold2619	75	1	11048	369031	1	8	369	10.8
8	75	24996474	25021053	25274217	2	3	96	7.6
Zv7_NA1679	74	1	665	4184	2	7	233	0.1
2	74	21075783	22207298	24379210	2	17	602	65.6
6	73	19305682	19314427	20867160	1	132	5490	46.9
Zv7_NA576	72	1	6280	38700	1	12	714	0.9
6	72	992581	1111963	4299605	1	6	273	96.3
22	72	12473423	13055376	13980199	1	20	1186	27.9
3	71	20567360	23026735	23591909	1	11	697	17
17	70	42813285	43026945	44834780	1	8	237	54.6
Zv7_NA25	69	16544	102308	105799	1	2	88	0.1
3	69	17738507	18238378	18248833	1	14	616	0.3
5	69	25310791	25344653	27311383	2	5	164	59.4
Zv7_scaffold2589	68	16544	174031	174968	1	3	119	0
Zv7_NA701	68	1	11478	11732	1	10	609	0
6	68	44451042	46330928	46861948	1	21	891	16
7	68	330861	1918474	2330634	1	5	167	12.4
16	68	37254837	39107638	39107898	1	5	321	0
Zv7_NA18	67	16544	85531	90858	1	5	237	0.1
Zv7_NA890	67	16544	82894	172539	1	6	199	2.7
Zv7_NA711	67	1	4228	38513	1	19	907	1
6	67	4433525	4787641	5666869	1	16	840	26.5
Zv7_scaffold2511	66	16544	34359	34553	1	1	66	0
Zv7_NA1921	66	1	4191	4559	1	2	93	0
18	66	38115073	40324970	41261263	1	69	3126	28.3
Zv7_NA1715	65	1	8454	18878	1	3	126	0.3
Zv7_NA1452	65	1	1093	16375	1	10	487	0.4
21	65	6997690	9113727	10267820	2	12	310	34.8
Zv7_NA1084	64	16544	18345	22450	1	6	219	0.1
Zv7_NA681	64	16544	161541	229365	1	22	1048	2
1	64	5503547	5767920	8548854	2	6	182	84
21	64	38115073	41200324	41200638	1	1	64	0
Zv7_NA581	63	16544	32170	32958	1	1	63	0
Zv7_NA2911	63	1	5912	6022	1	1	63	0
9	63	41638732	44589456	44657400	1	3	146	2
7	63	28040386	28114136	29306123	1	20	706	36
16	63	49215426	52473122	52516213	1	47	2163	1.3
Zv7_NA22	62	1	251	60236	1	6	196	1.8
Zv7_NA903	62	16544	71497	119054	1	9	351	1.4
Zv7_scaffold2495	62	16544	156138	245806	1	29	1259	2.7
Zv7_NA8	61	16544	152817	210587	1	4	155	1.7
Zv7_NA612	61	1	4139	4525	1	6	333	0
Zv7_NA122	61	16544	51962	343581	1	21	638	8.8
Zv7_NA2234	61	1	7825	13733	1	26	1025	0.1
24	61	29909745	31607186	31771049	1	18	793	4.9
Zv7_NA6	60	16544	114776	126598	1	2	111	0.3
Zv7_NA7296	60	1	193	754	1	2	90	0
Zv7_NA3608	60	1	2305	24413	1	12	535	0.6
6	60	10968010	12633700	13639945	1	10	281	30.4
Zv7_NA3012	58	16544	48240	52188	1	3	107	0.1
12	58	10223575	10913431	11832526	1	16	676	27.7
24	58	15715851	16869675	17791771	1	20	893	27.8
Zv7_NA289	57	16544	55656	356251	1	18	672	9
9	57	48024330	51326224	51327283	1	12	505	0
19	56	20794552	21728283	22320951	1	18	820	17.9
4	56	17051404	18987714	20332289	1	44	1472	40.6
20	56	37254837	38003978	38004354	1	3	111	0
7	56	20794552	21520758	22374831	1	99	4068	25.8
Zv7_NA472	55	16544	97869	98063	1	1	55	0
15	55	31646760	31934127	34307512	1	70	2566	71.7
15	55	1	16735	279806	1	8	253	7.9
12	55	43160688	45796005	46462252	1	9	259	20.1
13	54	30918868	31633160	32192365	1	15	600	16.9
Zv7_NA757	52	16544	46115	121995	1	15	605	2.2
17	52	48470991	51701025	51770732	1	31	1279	2.1
Zv7_NA1929	51	16544	36125	38218	1	15	578	0
24	51	7328550	8131370	8131845	1	11	452	0
8	51	33846979	33877654	34568203	2	4	94	20.8
Zv7_NA402	50	1	6633	128521	1	13	520	3.6
5	50	40034061	40715349	40730425	1	4	140	0.4
7	50	52110451	54085103	54092071	1	14	636	0.2
22	50	35617080	38912533	38916381	1	22	686	0.1
Zv7_NA6815	49	1	563	721	1	1	49	0
12	49	40034061	41242362	42017681	1	6	187	23.4
Zv7_NA5059	48	1	2011	2560	1	2	73	0
Zv7_NA7088	48	1	5030	10170	1	4	122	0.1
Zv7_NA200	46	16544	24498	26272	1	4	134	0
Zv7_NA989	46	16544	27741	157014	1	13	508	3.9
10	45	3358230	3413223	5817942	2	17	366	72.6
Zv7_NA6673	44	1	1833	2620	1	3	98	0
Zv7_NA3755	44	1	57	20642	1	4	137	0.6
17	44	8188786	8468360	8827405	1	8	238	10.8
21	43	36957063	37077831	37788127	2	10	208	21.4
Zv7_NA741	42	16544	145472	185719	1	5	164	1.2
Zv7_NA3168	42	1	2530	9339	1	9	344	0.2
8	42	14078094	16964702	17349397	2	2	42	11.6
Zv7_NA783	38	16544	92587	100189	1	4	125	0.2
Zv7_NA1575	37	1	15060	21328	1	4	125	0.1
14	37	4433525	5079395	5327669	1	5	161	7.5
9	33	27511010	27542601	28442611	1	4	93	27.2
17	26	24285125	26727279	27583110	1	3	70	25.8
6	25	33449947	33556753	33747722	1	3	71	5.7
13	25	42498968	42502170	43142901	1	5	106	19.3
4	23	23850577	23941595	24669377	1	12	253	21.9
10	23	24847587	27240579	27863914	1	4	86	18.8
9	23	15897824	19006263	19174794	1	2	44	5
24	23	26154484	26165880	27219798	1	7	148	31.8
1	23	21715687	24738211	24738438	1	1	23	0
23	23	1	1629134	2836446	1	4	86	36.4
16	23	19553827	19609195	19931639	1	3	67	9.7
20	22	14987959	17865082	18051993	1	2	43	5.6
8	22	41340958	44498650	44556967	1	2	44	1.7
25	21	24435677	24591758	24591844	1	1	21	0
19	21	22845884	25768085	25768141	1	1	21	0
14	21	40331835	42986979	43443932	1	4	79	13.8
25	20	746101	4021288	4021470	1	1	20	0
19	20	41638732	41793344	41793475	1	1	20	0
18	20	28040386	31084296	31084370	1	1	20	0
13	20	10587521	10762303	10762353	1	1	20	0
global files summary:
Danio_rerio.glob01.13.minQN1.fac2.01.blastresult
Danio_rerio.glob02.7.minQN1.fac2.01.blastresult
Danio_rerio.glob03.21.minQN1.fac2.01.blastresult
Danio_rerio.glob04.21.minQN1.fac2.02.blastresult
Danio_rerio.glob05.14.minQN1.fac2.01.blastresult
Danio_rerio.glob06.21.minQN1.fac2.03.blastresult
Danio_rerio.glob07.14.minQN1.fac2.02.blastresult
Danio_rerio.glob08.12.minQN1.fac2.01.blastresult
Danio_rerio.glob09.1.minQN1.fac2.01.blastresult
Danio_rerio.glob10.13.minQN1.fac2.02.blastresult
Danio_rerio.glob11.16.minQN1.fac2.01.blastresult
Danio_rerio.glob12.7.minQN1.fac2.02.blastresult
Danio_rerio.glob13.12.minQN1.fac2.02.blastresult
Danio_rerio.glob14.10.minQN1.fac2.01.blastresult
Danio_rerio.glob15.20.minQN1.fac2.01.blastresult
Danio_rerio.glob16.20.minQN1.fac2.02.blastresult
Danio_rerio.glob17.15.minQN1.fac2.01.blastresult
Danio_rerio.glob18.2.minQN1.fac2.01.blastresult
Danio_rerio.glob19.2.minQN1.fac2.02.blastresult
Danio_rerio.glob20.25.minQN1.fac2.01.blastresult
Danio_rerio.glob21.4.minQN1.fac2.01.blastresult
Danio_rerio.glob22.6.minQN1.fac2.01.blastresult
Danio_rerio.glob23.2.minQN1.fac2.03.blastresult
Danio_rerio.glob24.22.minQN1.fac2.01.blastresult
Danio_rerio.glob25.23.minQN1.fac2.01.blastresult
Danio_rerio.glob26.20.minQN1.fac2.03.blastresult
Danio_rerio.glob27.5.minQN1.fac2.01.blastresult
Danio_rerio.glob28.5.minQN1.fac2.02.blastresult
Danio_rerio.glob29.15.minQN1.fac2.02.blastresult
Danio_rerio.glob30.24.minQN1.fac2.01.blastresult
Danio_rerio.glob31.22.minQN1.fac2.02.blastresult
Danio_rerio.glob32.8.minQN1.fac2.01.blastresult
Danio_rerio.glob33.18.minQN1.fac2.01.blastresult
Danio_rerio.glob34.4.minQN1.fac2.02.blastresult
Danio_rerio.glob35.6.minQN1.fac2.02.blastresult
Danio_rerio.glob36.2.minQN1.fac2.04.blastresult
Danio_rerio.glob37.16.minQN1.fac2.02.blastresult
Danio_rerio.glob38.6.minQN1.fac2.03.blastresult
Danio_rerio.glob39.2.minQN1.fac2.05.blastresult
Danio_rerio.glob40.20.minQN1.fac2.04.blastresult
Danio_rerio.glob41.17.minQN1.fac2.01.blastresult
Danio_rerio.glob42.8.minQN1.fac2.02.blastresult
Danio_rerio.glob43.9.minQN1.fac2.01.blastresult
Danio_rerio.glob44.14.minQN1.fac2.03.blastresult
Danio_rerio.glob45.13.minQN1.fac2.03.blastresult
Danio_rerio.glob46.13.minQN1.fac2.04.blastresult
Danio_rerio.glob47.Zv7_NA3207.minQN1.fac2.01.blastresult
Danio_rerio.glob48.4.minQN1.fac2.03.blastresult
Danio_rerio.glob49.Zv7_NA1102.minQN1.fac2.01.blastresult
Danio_rerio.glob50.12.minQN1.fac2.03.blastresult
Danio_rerio.glob51.16.minQN1.fac2.03.blastresult
Danio_rerio.glob52.1.minQN1.fac2.02.blastresult
Danio_rerio.glob53.24.minQN1.fac2.02.blastresult
Danio_rerio.glob54.16.minQN1.fac2.04.blastresult
Danio_rerio.glob55.17.minQN1.fac2.02.blastresult
Danio_rerio.glob56.11.minQN1.fac2.01.blastresult
Danio_rerio.glob57.7.minQN1.fac2.03.blastresult
Danio_rerio.glob58.14.minQN1.fac2.04.blastresult
Danio_rerio.glob59.4.minQN1.fac2.04.blastresult
Danio_rerio.glob60.1.minQN1.fac2.03.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 3903845 nt (7'807'690 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome NT_113931:
54	1	81431	81961	1	1	54	0	(marked for saving)
chromosome NT_113929:
55	1	89420	105275	1	2	74	0.2	(marked for saving)
chromosome NT_113884:
52	1	46283	62406	1	2	98	0.2	(marked for saving)
chromosome NT_113906:
62	1	566	27356	1	10	352	0.3	(marked for saving)
chromosome NT_113890:
78	1	13893	113519	1	19	720	1.2	(marked for saving)
chromosome NT_113886:
171	1	3978	89096	3	23	610	1	(marked for saving)
chromosome 21:
66	33013838	37854471	40819857	1	43	1049	37.9	(marked for saving)
chromosome Y:
618	2732731	2906904	8898382	2	31	1696	76.7	(marked for saving)
69	18270253	22504048	26042770	1	12	422	45.3	(marked for saving)
chromosome 11:
461	5777773	6459038	11331113	3	25	1398	62.4	(marked for saving)
417	74330257	74477480	77774415	4	10	654	42.2	(marked for saving)
211	97480384	97506444	102960151	2	7	467	69.8	(marked for saving)
125	42903862	46350316	47238710	1	7	499	11.3	(marked for saving)
118	115321207	123101891	123102748	1	1	118	0	(marked for saving)
114	56099044	56153841	63869410	2	11	437	98.8	(marked for saving)
59	21861841	23768351	23771985	1	3	146	0	(marked for saving)
58	48213166	55554576	55555373	1	1	58	0	(marked for saving)
56	89360272	92354266	92354988	1	1	56	0	(marked for saving)
chromosome 18:
453	1	186795	5881241	4	20	1139	72.9	(marked for saving)
449	13663651	13815888	21108115	3	9	757	93.3	(marked for saving)
312	48681634	51454062	56190436	2	4	353	60.6	(marked for saving)
70	29825797	31079478	31415321	1	15	754	4.3	(marked for saving)
61	67108042	71757239	74892104	1	45	1526	40.1	(marked for saving)
57	42903862	46444402	47023001	1	5	185	7.4	(marked for saving)
chromosome 14:
410	88909991	89902797	95777441	3	8	543	75.2	(marked for saving)
243	49090211	49619425	54950530	3	17	604	68.2	(marked for saving)
240	63885992	64118740	70581185	2	30	1259	82.7	(marked for saving)
238	71420519	72781148	77220085	2	21	783	56.8	(marked for saving)
235	30039179	30650531	37749362	3	7	449	90.9	(marked for saving)
56	15828983	19458711	19582781	1	2	83	1.5	(marked for saving)
chromosome 22:
519	17043228	18097084	24831952	5	126	3583	86.2	(marked for saving)
chromosome X:
840	68044978	70062475	74521385	5	25	1808	57.1	(marked for saving)
828	82606525	82701494	89255411	3	5	931	83.9	(marked for saving)
591	42903862	46244843	49532913	3	27	1931	42.1	(marked for saving)
479	128750623	129191233	136478890	6	33	1576	93.3	(marked for saving)
271	97792696	100063113	102230298	3	23	995	27.7	(marked for saving)
256	51648598	55529980	57953003	2	5	646	31	(marked for saving)
123	14444431	14557482	22201581	2	15	547	97.9	(marked for saving)
115	144483340	151827922	152266642	1	6	392	5.6	(marked for saving)
107	22993972	24138284	24139465	1	4	333	0	(marked for saving)
65	61174114	63717489	64062474	1	2	87	4.4	(marked for saving)
60	702703	2759924	3702838	1	4	164	12	(marked for saving)
56	138315178	138942795	138943151	1	1	56	0	(marked for saving)
chromosome c6_COX:
402	23943225	28979020	31724965	3	157	4279	35.1	(marked for saving)
chromosome c6_QBL:
397	23938163	28973958	31723395	3	163	4552	35.2	(marked for saving)
chromosome 20:
385	17840824	17880475	25604450	4	29	1364	98.9	(marked for saving)
295	54225172	54257436	62022276	4	43	1413	99.4	(marked for saving)
192	2732731	3660951	3988760	1	7	368	4.1	(marked for saving)
172	28654627	29589271	36259711	3	44	1402	85.4	(marked for saving)
136	43372330	43854071	50783367	1	38	1967	88.7	(marked for saving)
chromosome 16:
417	2381380	2488994	9158239	2	40	2652	85.4	(marked for saving)
307	80732653	81025933	88514094	3	26	1195	95.9	(marked for saving)
257	66483418	66500463	74126221	3	24	1324	97.6	(marked for saving)
173	24477454	25158689	31973439	2	71	3449	87.2	(marked for saving)
134	42903862	45217901	49732352	2	12	649	57.8	(marked for saving)
120	51648598	56167707	57112190	1	8	469	12	(marked for saving)
55	12180169	12903636	12904094	1	1	55	0	(marked for saving)
chromosome 15:
417	74313859	74338619	82113743	4	12	685	99.5	(marked for saving)
252	82160698	82430348	89239753	3	73	3307	87.2	(marked for saving)
204	65412967	69679458	73111644	2	18	620	43.9	(marked for saving)
201	55809373	56089932	63213190	2	28	1478	91.2	(marked for saving)
194	40935514	41440824	48258919	2	11	581	87.3	(marked for saving)
182	32073661	32142292	39657643	3	15	649	96.2	(marked for saving)
99	89539069	96381358	97317975	2	19	596	11.9	(marked for saving)
69	13178785	19190018	19235196	1	2	93	0.5	(marked for saving)
60	23055652	29071034	30321351	1	7	212	16	(marked for saving)
57	48274846	49854063	50871191	1	8	252	13	(marked for saving)
chromosome 10:
624	118873756	122104206	126647084	6	57	2118	58.1	(marked for saving)
432	39390352	42091060	46816762	5	52	2517	60.5	(marked for saving)
313	61720660	61897188	69224011	3	9	508	93.8	(marked for saving)
291	21861841	29227940	29228419	1	1	291	0	(marked for saving)
287	111026917	111557399	115795060	2	9	628	54.2	(marked for saving)
284	97480384	97564663	103582381	4	39	1413	77	(marked for saving)
88	48213166	50693148	50693608	1	2	117	0	(marked for saving)
73	31387357	38123505	38783148	1	9	468	8.4	(marked for saving)
58	127540414	134740358	135347846	1	14	537	7.7	(marked for saving)
51	702703	6643861	7236204	1	4	115	7.5	(marked for saving)
chromosome 12:
705	50204155	50984259	56924909	9	101	4268	76	(marked for saving)
378	60432373	60455974	67939106	3	7	689	95.8	(marked for saving)
290	74330257	75578316	75578795	1	1	290	0	(marked for saving)
267	119654536	120926379	127215197	3	8	456	80.5	(marked for saving)
264	5777773	6650190	12660110	4	31	1146	76.9	(marked for saving)
199	39390352	42149652	47023541	2	8	498	62.4	(marked for saving)
153	84402319	90904325	91086784	1	3	264	2.3	(marked for saving)
104	22993972	24686888	29702998	1	10	467	64.2	(marked for saving)
80	14132119	15153368	15261675	1	3	133	1.3	(marked for saving)
39	102984883	106237502	107257470	1	6	199	13	(marked for saving)
chromosome 17:
770	16279264	16395790	24063060	5	50	2615	98.2	(marked for saving)
557	42903862	43132862	49565917	6	67	3747	82.3	(marked for saving)
543	702703	1827827	8220727	4	57	3146	81.8	(marked for saving)
238	8354347	11534522	15872556	2	25	1514	55.5	(marked for saving)
236	24165142	24233235	29389670	3	16	514	66	(marked for saving)
194	31387357	34902582	38485320	2	18	713	45.8	(marked for saving)
123	64141078	68677207	71913299	2	10	362	41.4	(marked for saving)
chromosome 5:
1144	170600431	170611326	178383763	9	75	3940	99.5	(marked for saving)
465	147528382	147869301	154367788	6	65	2543	83.2	(marked for saving)
258	1	456849	457655	1	1	258	0	(marked for saving)
237	117936820	118910728	122543914	2	5	316	46.5	(marked for saving)
230	65858794	66940245	71792329	2	5	445	62.1	(marked for saving)
179	34900867	34918942	42503420	2	6	423	97.1	(marked for saving)
179	100603504	100635249	108410788	3	5	298	99.5	(marked for saving)
170	26468443	31742281	31897790	1	5	321	1.9	(marked for saving)
143	157990834	159276677	165265188	2	7	369	76.7	(marked for saving)
98	108411304	108425438	108944006	2	10	359	6.6	(marked for saving)
91	51648598	54189221	54190055	1	4	282	0	(marked for saving)
82	74330257	75505228	75505761	1	1	82	0	(marked for saving)
67	136597462	137716065	137831336	1	5	231	1.4	(marked for saving)
56	55591537	63292073	63293173	1	2	109	0	(marked for saving)
23	42903862	43077832	43078053	1	1	23	0	(marked for saving)
chromosome 3:
1005	40483444	40503549	48286174	3	74	5416	99.6	(marked for saving)
494	146864719	147024737	154363667	4	26	1591	93.9	(marked for saving)
330	31387357	31812007	37917812	2	15	1079	78.2	(marked for saving)
297	167164999	170059137	173012082	3	20	1029	37.8	(marked for saving)
249	61174114	62330852	66892651	3	9	422	58.4	(marked for saving)
213	97480384	98439393	105265067	4	12	477	87.4	(marked for saving)
192	189300112	194356517	197093521	3	7	340	35	(marked for saving)
181	134996863	135240245	142647412	3	17	717	94.8	(marked for saving)
170	115321207	115353326	123073689	2	7	397	98.8	(marked for saving)
162	48915868	49899810	52743064	3	24	937	36.4	(marked for saving)
150	82801720	88122593	89582169	3	13	481	18.6	(marked for saving)
146	702703	1922335	1922809	1	2	283	0	(marked for saving)
144	155140987	155224314	155224715	1	1	144	0	(marked for saving)
116	123363241	123437703	128231167	2	31	1134	61.3	(marked for saving)
116	20612593	21422182	21422826	2	2	116	0	(marked for saving)
101	182897716	185015734	185781606	2	9	341	9.8	(marked for saving)
54	7729723	11275796	11277154	1	2	89	0	(marked for saving)
chromosome 6:
855	105092989	106660942	112835920	7	54	2803	79	(marked for saving)
824	24750727	25369446	32385136	6	127	7313	89.8	(marked for saving)
314	82801720	87781775	88911382	3	10	542	14.4	(marked for saving)
243	125978854	128657170	133008748	2	17	1036	55.7	(marked for saving)
227	5777773	6996864	10683446	2	16	808	47.2	(marked for saving)
173	152095945	159461899	159867550	1	6	369	5.1	(marked for saving)
149	114384271	116370276	118297389	2	22	844	24.6	(marked for saving)
138	12180169	19251905	19252370	1	3	271	0	(marked for saving)
113	38921884	42495362	43236591	2	23	727	9.4	(marked for saving)
61	34432399	35366351	35368484	1	9	368	0	(marked for saving)
59	139876738	144304995	144550334	1	7	285	3.1	(marked for saving)
56	74330257	78228703	78229770	1	2	106	0	(marked for saving)
45	51648598	54743307	54743830	1	2	80	0	(marked for saving)
chromosome 8:
574	16630615	16718546	24087153	7	53	2141	94.3	(marked for saving)
437	51648598	54608021	57311782	5	21	1017	34.6	(marked for saving)
330	31387357	34851220	38530140	4	33	1335	47.1	(marked for saving)
329	5777773	7177559	12281904	5	40	1837	65.3	(marked for saving)
307	138432295	141814519	146202091	4	115	6117	56.1	(marked for saving)
218	118873756	123850718	126059194	2	13	691	28.2	(marked for saving)
162	127969843	133587484	135684351	2	13	523	26.8	(marked for saving)
144	93927835	94727471	100033090	2	9	426	67.9	(marked for saving)
90	42903862	47951378	48005016	1	2	115	0.6	(marked for saving)
73	82801720	87130012	87145957	1	2	95	0.2	(marked for saving)
59	102984883	103731611	103732745	1	2	90	0	(marked for saving)
chromosome 7:
726	19714696	20008913	27399792	6	51	3368	94.6	(marked for saving)
486	142726585	142795052	150522517	7	95	4768	98.9	(marked for saving)
329	91273183	91468881	99065564	4	29	1763	97.2	(marked for saving)
267	115672558	115744162	123120020	3	12	545	94.4	(marked for saving)
259	702703	3344294	7085254	2	26	1616	47.9	(marked for saving)
218	99432334	99469550	107186808	3	11	642	98.8	(marked for saving)
188	12180169	14991415	15633057	2	8	498	8.2	(marked for saving)
185	51648598	54002220	56527847	3	16	625	32.3	(marked for saving)
140	134840707	137980959	139062707	2	6	262	13.8	(marked for saving)
107	61174114	67743721	68276578	1	10	369	6.8	(marked for saving)
103	38921884	40005537	41984875	2	13	484	25.3	(marked for saving)
81	125978854	130068570	130069049	1	1	81	0	(marked for saving)
chromosome 4:
1077	47939893	48038518	55720674	10	148	6553	98.3	(marked for saving)
453	1210210	1226428	8979849	7	98	3598	99.3	(marked for saving)
427	18777760	19415386	26566221	3	10	622	91.5	(marked for saving)
349	124768645	124886355	131148102	2	7	626	80.1	(marked for saving)
261	98924827	99549470	106673233	3	6	440	91.2	(marked for saving)
257	9096088	12819765	13463321	3	8	405	8.2	(marked for saving)
253	36345310	37499378	42098144	2	6	535	58.9	(marked for saving)
207	61174114	62796607	66419557	3	10	479	46.4	(marked for saving)
191	163651489	166152971	166153447	1	1	191	0	(marked for saving)
141	183444262	189161307	191246815	2	23	956	26.7	(marked for saving)
114	111026917	111557465	115244827	2	8	317	47.2	(marked for saving)
54	78780703	81093187	85619150	1	10	412	57.9	(marked for saving)
51	139876738	144346762	144354955	1	2	85	0.1	(marked for saving)
chromosome 9:
853	90687598	90806074	98489227	7	54	2878	98.4	(marked for saving)
671	107942836	111545710	114846223	6	44	2026	42.2	(marked for saving)
419	127852726	128323847	135643241	6	159	4755	93.7	(marked for saving)
410	36345310	37026513	43655239	4	30	1807	84.8	(marked for saving)
317	79366288	79984953	86826169	3	28	1010	87.6	(marked for saving)
250	5777773	6185934	13343487	2	39	1418	91.6	(marked for saving)
196	98924827	99000472	103211734	2	14	1124	53.9	(marked for saving)
101	118873756	124406671	124859204	2	5	190	5.7	(marked for saving)
67	61720660	69135843	69138581	1	3	153	0	(marked for saving)
chromosome 2:
683	171771529	171836281	179375347	8	198	8357	96.5	(marked for saving)
442	112119937	112141440	119751164	4	18	950	97.4	(marked for saving)
390	56801674	56991809	62613698	3	13	773	72	(marked for saving)
383	128086888	128314652	135455303	5	19	843	91.4	(marked for saving)
363	217330042	218707887	224493831	5	20	890	74.1	(marked for saving)
329	231969667	232132983	237245572	4	11	541	65.4	(marked for saving)
260	24867772	27454060	31367971	3	12	593	50.1	(marked for saving)
230	93537373	94780508	97721000	3	13	792	37.6	(marked for saving)
225	35681575	36380112	42683680	2	9	473	80.7	(marked for saving)
212	145654438	148683066	148770718	1	4	449	1.1	(marked for saving)
184	67615477	73372165	75169373	3	18	647	23	(marked for saving)
184	6285208	9837506	12052748	2	10	434	28.3	(marked for saving)
161	206984707	210382208	212690570	3	9	353	29.5	(marked for saving)
155	47159041	53630218	54268158	1	5	285	8.1	(marked for saving)
121	180477226	186503113	186530033	1	4	234	0.3	(marked for saving)
88	100837666	108259718	108260825	1	2	121	0	(marked for saving)
86	154438213	157775291	157822945	1	3	151	0.6	(marked for saving)
83	163612378	171279301	171282109	1	2	108	0	(marked for saving)
69	196444177	203634283	203635082	1	5	295	0	(marked for saving)
57	120240049	121452468	121989755	1	7	251	6.8	(marked for saving)
chromosome 1:
968	20612593	22107178	28287550	7	48	2671	79.1	(marked for saving)
505	198435238	198644329	204888810	4	8	663	79.9	(marked for saving)
451	56684629	56776712	64416550	5	45	1764	97.8	(marked for saving)
444	37282246	37790806	44451977	3	62	3179	85.3	(marked for saving)
396	29435407	30344132	33733642	5	26	1139	43.4	(marked for saving)
301	207648442	210291492	210291971	1	1	301	0	(marked for saving)
278	47159113	47552619	53768255	3	19	1209	79.6	(marked for saving)
269	218423206	218428380	226196618	3	14	766	99.4	(marked for saving)
263	9447439	9714110	16909549	4	20	844	92.1	(marked for saving)
253	176963788	177350625	184372715	3	32	1218	89.9	(marked for saving)
224	94044952	94085575	101478157	2	9	440	94.6	(marked for saving)
221	157990834	160270153	164350385	3	15	619	52.2	(marked for saving)
191	113447335	113469867	119967417	3	12	711	83.2	(marked for saving)
170	239309071	242279133	247109347	2	8	455	61.8	(marked for saving)
148	226348123	226413122	227628024	3	8	265	15.5	(marked for saving)
141	84480397	85052198	90955146	2	4	208	75.6	(marked for saving)
113	149558410	154448189	155251501	2	27	961	10.2	(marked for saving)
109	702703	959847	6571106	2	24	731	71.8	(marked for saving)
66	65858794	68284921	68285463	1	1	66	0	(marked for saving)
58	104624521	111844134	111847412	1	2	101	0	(marked for saving)
58	167164999	171642792	172121729	1	2	84	6.1	(marked for saving)
57	189417229	191229616	191230524	1	1	57	0	(marked for saving)
52	232672441	238137453	238139063	1	2	87	0	(marked for saving)
chromosome 19:
723	2498497	2530308	10196593	8	94	4995	98.1	(marked for saving)
502	10423414	10485716	18127461	5	73	3295	97.8	(marked for saving)
459	38765728	38771955	46457391	3	45	3514	98.4	(marked for saving)
327	18309292	18430375	22951663	4	37	2512	57.9	(marked for saving)
268	55981927	56782330	63766375	3	174	12035	89.4	(marked for saving)
231	46729684	46956270	53482010	3	51	4225	83.5	(marked for saving)
43	29825797	35626691	35627485	1	2	84	0	(marked for saving)
chromosome 13:
7952	24691464	24808396	32488807	27	466	29293	98.3	(marked for saving)
542	35817579	39312298	41543115	2	18	1261	28.5	(marked for saving)
276	93790494	94210823	100125022	3	31	1151	75.7	(marked for saving)
155	71147874	71176314	78794701	1	23	1093	97.5	(marked for saving)
151	102418113	109866107	110213481	1	7	327	4.4	(marked for saving)
69	82820535	88811635	88811970	1	2	129	0	(marked for saving)
19	79267986	79306387	79306506	1	1	19	0	(marked for saving)
19	63027762	70794167	70794184	1	1	19	0	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
13	7952	24691464	24808396	32488807	27	466	29293	98.3	(saved)
5	1144	170600431	170611326	178383763	9	75	3940	99.5	(saved)
4	1077	47939893	48038518	55720674	10	148	6553	98.3	(saved)
3	1005	40483444	40503549	48286174	3	74	5416	99.6	(saved)
1	968	20612593	22107178	28287550	7	48	2671	79.1	(saved)
6	855	105092989	106660942	112835920	7	54	2803	79	(saved)
9	853	90687598	90806074	98489227	7	54	2878	98.4	(saved)
X	840	68044978	70062475	74521385	5	25	1808	57.1	(saved)
X	828	82606525	82701494	89255411	3	5	931	83.9	(saved)
6	824	24750727	25369446	32385136	6	127	7313	89.8	(saved)
17	770	16279264	16395790	24063060	5	50	2615	98.2	(saved)
7	726	19714696	20008913	27399792	6	51	3368	94.6	(saved)
19	723	2498497	2530308	10196593	8	94	4995	98.1	(saved)
12	705	50204155	50984259	56924909	9	101	4268	76	(saved)
2	683	171771529	171836281	179375347	8	198	8357	96.5	(saved)
9	671	107942836	111545710	114846223	6	44	2026	42.2	(saved)
10	624	118873756	122104206	126647084	6	57	2118	58.1	(saved)
Y	618	2732731	2906904	8898382	2	31	1696	76.7	(saved)
X	591	42903862	46244843	49532913	3	27	1931	42.1	(saved)
8	574	16630615	16718546	24087153	7	53	2141	94.3	(saved)
17	557	42903862	43132862	49565917	6	67	3747	82.3	(saved)
17	543	702703	1827827	8220727	4	57	3146	81.8	(saved)
13	542	35817579	39312298	41543115	2	18	1261	28.5	(saved)
22	519	17043228	18097084	24831952	5	126	3583	86.2	(saved)
1	505	198435238	198644329	204888810	4	8	663	79.9	(saved)
19	502	10423414	10485716	18127461	5	73	3295	97.8	(saved)
3	494	146864719	147024737	154363667	4	26	1591	93.9	(saved)
7	486	142726585	142795052	150522517	7	95	4768	98.9	(saved)
X	479	128750623	129191233	136478890	6	33	1576	93.3	(saved)
5	465	147528382	147869301	154367788	6	65	2543	83.2	(saved)
11	461	5777773	6459038	11331113	3	25	1398	62.4	(saved)
19	459	38765728	38771955	46457391	3	45	3514	98.4	(saved)
18	453	1	186795	5881241	4	20	1139	72.9	(saved)
4	453	1210210	1226428	8979849	7	98	3598	99.3	(saved)
1	451	56684629	56776712	64416550	5	45	1764	97.8	(saved)
18	449	13663651	13815888	21108115	3	9	757	93.3	(saved)
1	444	37282246	37790806	44451977	3	62	3179	85.3	(saved)
2	442	112119937	112141440	119751164	4	18	950	97.4	(saved)
8	437	51648598	54608021	57311782	5	21	1017	34.6	(saved)
10	432	39390352	42091060	46816762	5	52	2517	60.5	(saved)
4	427	18777760	19415386	26566221	3	10	622	91.5	(saved)
9	419	127852726	128323847	135643241	6	159	4755	93.7	(saved)
11	417	74330257	74477480	77774415	4	10	654	42.2	(saved)
16	417	2381380	2488994	9158239	2	40	2652	85.4	(saved)
15	417	74313859	74338619	82113743	4	12	685	99.5	(saved)
14	410	88909991	89902797	95777441	3	8	543	75.2	(saved)
9	410	36345310	37026513	43655239	4	30	1807	84.8	(saved)
c6_COX	402	23943225	28979020	31724965	3	157	4279	35.1	(saved)
c6_QBL	397	23938163	28973958	31723395	3	163	4552	35.2	(saved)
1	396	29435407	30344132	33733642	5	26	1139	43.4	(saved)
2	390	56801674	56991809	62613698	3	13	773	72	(saved)
20	385	17840824	17880475	25604450	4	29	1364	98.9	(saved)
2	383	128086888	128314652	135455303	5	19	843	91.4	(saved)
12	378	60432373	60455974	67939106	3	7	689	95.8	(saved)
2	363	217330042	218707887	224493831	5	20	890	74.1	(saved)
4	349	124768645	124886355	131148102	2	7	626	80.1	(saved)
3	330	31387357	31812007	37917812	2	15	1079	78.2	(saved)
8	330	31387357	34851220	38530140	4	33	1335	47.1	(saved)
8	329	5777773	7177559	12281904	5	40	1837	65.3	(saved)
7	329	91273183	91468881	99065564	4	29	1763	97.2	(saved)
2	329	231969667	232132983	237245572	4	11	541	65.4
19	327	18309292	18430375	22951663	4	37	2512	57.9
9	317	79366288	79984953	86826169	3	28	1010	87.6
6	314	82801720	87781775	88911382	3	10	542	14.4
10	313	61720660	61897188	69224011	3	9	508	93.8
18	312	48681634	51454062	56190436	2	4	353	60.6
16	307	80732653	81025933	88514094	3	26	1195	95.9
8	307	138432295	141814519	146202091	4	115	6117	56.1
1	301	207648442	210291492	210291971	1	1	301	0
3	297	167164999	170059137	173012082	3	20	1029	37.8
20	295	54225172	54257436	62022276	4	43	1413	99.4
10	291	21861841	29227940	29228419	1	1	291	0
12	290	74330257	75578316	75578795	1	1	290	0
10	287	111026917	111557399	115795060	2	9	628	54.2
10	284	97480384	97564663	103582381	4	39	1413	77
1	278	47159113	47552619	53768255	3	19	1209	79.6
13	276	93790494	94210823	100125022	3	31	1151	75.7
X	271	97792696	100063113	102230298	3	23	995	27.7
1	269	218423206	218428380	226196618	3	14	766	99.4
19	268	55981927	56782330	63766375	3	174	12035	89.4
12	267	119654536	120926379	127215197	3	8	456	80.5
7	267	115672558	115744162	123120020	3	12	545	94.4
12	264	5777773	6650190	12660110	4	31	1146	76.9
1	263	9447439	9714110	16909549	4	20	844	92.1
4	261	98924827	99549470	106673233	3	6	440	91.2
2	260	24867772	27454060	31367971	3	12	593	50.1
7	259	702703	3344294	7085254	2	26	1616	47.9
5	258	1	456849	457655	1	1	258	0
16	257	66483418	66500463	74126221	3	24	1324	97.6
4	257	9096088	12819765	13463321	3	8	405	8.2
X	256	51648598	55529980	57953003	2	5	646	31
4	253	36345310	37499378	42098144	2	6	535	58.9
1	253	176963788	177350625	184372715	3	32	1218	89.9
15	252	82160698	82430348	89239753	3	73	3307	87.2
9	250	5777773	6185934	13343487	2	39	1418	91.6
3	249	61174114	62330852	66892651	3	9	422	58.4
14	243	49090211	49619425	54950530	3	17	604	68.2
6	243	125978854	128657170	133008748	2	17	1036	55.7
14	240	63885992	64118740	70581185	2	30	1259	82.7
14	238	71420519	72781148	77220085	2	21	783	56.8
17	238	8354347	11534522	15872556	2	25	1514	55.5
5	237	117936820	118910728	122543914	2	5	316	46.5
17	236	24165142	24233235	29389670	3	16	514	66
14	235	30039179	30650531	37749362	3	7	449	90.9
19	231	46729684	46956270	53482010	3	51	4225	83.5
5	230	65858794	66940245	71792329	2	5	445	62.1
2	230	93537373	94780508	97721000	3	13	792	37.6
6	227	5777773	6996864	10683446	2	16	808	47.2
2	225	35681575	36380112	42683680	2	9	473	80.7
1	224	94044952	94085575	101478157	2	9	440	94.6
1	221	157990834	160270153	164350385	3	15	619	52.2
8	218	118873756	123850718	126059194	2	13	691	28.2
7	218	99432334	99469550	107186808	3	11	642	98.8
3	213	97480384	98439393	105265067	4	12	477	87.4
2	212	145654438	148683066	148770718	1	4	449	1.1
11	211	97480384	97506444	102960151	2	7	467	69.8
4	207	61174114	62796607	66419557	3	10	479	46.4
15	204	65412967	69679458	73111644	2	18	620	43.9
15	201	55809373	56089932	63213190	2	28	1478	91.2
12	199	39390352	42149652	47023541	2	8	498	62.4
9	196	98924827	99000472	103211734	2	14	1124	53.9
15	194	40935514	41440824	48258919	2	11	581	87.3
17	194	31387357	34902582	38485320	2	18	713	45.8
20	192	2732731	3660951	3988760	1	7	368	4.1
3	192	189300112	194356517	197093521	3	7	340	35
4	191	163651489	166152971	166153447	1	1	191	0
1	191	113447335	113469867	119967417	3	12	711	83.2
7	188	12180169	14991415	15633057	2	8	498	8.2
7	185	51648598	54002220	56527847	3	16	625	32.3
2	184	67615477	73372165	75169373	3	18	647	23
2	184	6285208	9837506	12052748	2	10	434	28.3
15	182	32073661	32142292	39657643	3	15	649	96.2
3	181	134996863	135240245	142647412	3	17	717	94.8
5	179	34900867	34918942	42503420	2	6	423	97.1
5	179	100603504	100635249	108410788	3	5	298	99.5
16	173	24477454	25158689	31973439	2	71	3449	87.2
6	173	152095945	159461899	159867550	1	6	369	5.1
20	172	28654627	29589271	36259711	3	44	1402	85.4
NT_113886	171	1	3978	89096	3	23	610	1
5	170	26468443	31742281	31897790	1	5	321	1.9
3	170	115321207	115353326	123073689	2	7	397	98.8
1	170	239309071	242279133	247109347	2	8	455	61.8
3	162	48915868	49899810	52743064	3	24	937	36.4
8	162	127969843	133587484	135684351	2	13	523	26.8
2	161	206984707	210382208	212690570	3	9	353	29.5
2	155	47159041	53630218	54268158	1	5	285	8.1
13	155	71147874	71176314	78794701	1	23	1093	97.5
12	153	84402319	90904325	91086784	1	3	264	2.3
13	151	102418113	109866107	110213481	1	7	327	4.4
3	150	82801720	88122593	89582169	3	13	481	18.6
6	149	114384271	116370276	118297389	2	22	844	24.6
1	148	226348123	226413122	227628024	3	8	265	15.5
3	146	702703	1922335	1922809	1	2	283	0
3	144	155140987	155224314	155224715	1	1	144	0
8	144	93927835	94727471	100033090	2	9	426	67.9
5	143	157990834	159276677	165265188	2	7	369	76.7
4	141	183444262	189161307	191246815	2	23	956	26.7
1	141	84480397	85052198	90955146	2	4	208	75.6
7	140	134840707	137980959	139062707	2	6	262	13.8
6	138	12180169	19251905	19252370	1	3	271	0
20	136	43372330	43854071	50783367	1	38	1967	88.7
16	134	42903862	45217901	49732352	2	12	649	57.8
11	125	42903862	46350316	47238710	1	7	499	11.3
X	123	14444431	14557482	22201581	2	15	547	97.9
17	123	64141078	68677207	71913299	2	10	362	41.4
2	121	180477226	186503113	186530033	1	4	234	0.3
16	120	51648598	56167707	57112190	1	8	469	12
11	118	115321207	123101891	123102748	1	1	118	0
3	116	123363241	123437703	128231167	2	31	1134	61.3
3	116	20612593	21422182	21422826	2	2	116	0
X	115	144483340	151827922	152266642	1	6	392	5.6
11	114	56099044	56153841	63869410	2	11	437	98.8
4	114	111026917	111557465	115244827	2	8	317	47.2
6	113	38921884	42495362	43236591	2	23	727	9.4
1	113	149558410	154448189	155251501	2	27	961	10.2
1	109	702703	959847	6571106	2	24	731	71.8
X	107	22993972	24138284	24139465	1	4	333	0
7	107	61174114	67743721	68276578	1	10	369	6.8
12	104	22993972	24686888	29702998	1	10	467	64.2
7	103	38921884	40005537	41984875	2	13	484	25.3
3	101	182897716	185015734	185781606	2	9	341	9.8
9	101	118873756	124406671	124859204	2	5	190	5.7
15	99	89539069	96381358	97317975	2	19	596	11.9
5	98	108411304	108425438	108944006	2	10	359	6.6
5	91	51648598	54189221	54190055	1	4	282	0
8	90	42903862	47951378	48005016	1	2	115	0.6
10	88	48213166	50693148	50693608	1	2	117	0
2	88	100837666	108259718	108260825	1	2	121	0
2	86	154438213	157775291	157822945	1	3	151	0.6
2	83	163612378	171279301	171282109	1	2	108	0
5	82	74330257	75505228	75505761	1	1	82	0
7	81	125978854	130068570	130069049	1	1	81	0
12	80	14132119	15153368	15261675	1	3	133	1.3
NT_113890	78	1	13893	113519	1	19	720	1.2
10	73	31387357	38123505	38783148	1	9	468	8.4
8	73	82801720	87130012	87145957	1	2	95	0.2
18	70	29825797	31079478	31415321	1	15	754	4.3
Y	69	18270253	22504048	26042770	1	12	422	45.3
15	69	13178785	19190018	19235196	1	2	93	0.5
2	69	196444177	203634283	203635082	1	5	295	0
13	69	82820535	88811635	88811970	1	2	129	0
5	67	136597462	137716065	137831336	1	5	231	1.4
9	67	61720660	69135843	69138581	1	3	153	0
21	66	33013838	37854471	40819857	1	43	1049	37.9
1	66	65858794	68284921	68285463	1	1	66	0
X	65	61174114	63717489	64062474	1	2	87	4.4
NT_113906	62	1	566	27356	1	10	352	0.3
18	61	67108042	71757239	74892104	1	45	1526	40.1
6	61	34432399	35366351	35368484	1	9	368	0
X	60	702703	2759924	3702838	1	4	164	12
15	60	23055652	29071034	30321351	1	7	212	16
11	59	21861841	23768351	23771985	1	3	146	0
6	59	139876738	144304995	144550334	1	7	285	3.1
8	59	102984883	103731611	103732745	1	2	90	0
11	58	48213166	55554576	55555373	1	1	58	0
10	58	127540414	134740358	135347846	1	14	537	7.7
1	58	104624521	111844134	111847412	1	2	101	0
1	58	167164999	171642792	172121729	1	2	84	6.1
18	57	42903862	46444402	47023001	1	5	185	7.4
15	57	48274846	49854063	50871191	1	8	252	13
2	57	120240049	121452468	121989755	1	7	251	6.8
1	57	189417229	191229616	191230524	1	1	57	0
11	56	89360272	92354266	92354988	1	1	56	0
14	56	15828983	19458711	19582781	1	2	83	1.5
X	56	138315178	138942795	138943151	1	1	56	0
5	56	55591537	63292073	63293173	1	2	109	0
6	56	74330257	78228703	78229770	1	2	106	0
NT_113929	55	1	89420	105275	1	2	74	0.2
16	55	12180169	12903636	12904094	1	1	55	0
NT_113931	54	1	81431	81961	1	1	54	0
3	54	7729723	11275796	11277154	1	2	89	0
4	54	78780703	81093187	85619150	1	10	412	57.9
NT_113884	52	1	46283	62406	1	2	98	0.2
1	52	232672441	238137453	238139063	1	2	87	0
10	51	702703	6643861	7236204	1	4	115	7.5
4	51	139876738	144346762	144354955	1	2	85	0.1
6	45	51648598	54743307	54743830	1	2	80	0
19	43	29825797	35626691	35627485	1	2	84	0
12	39	102984883	106237502	107257470	1	6	199	13
5	23	42903862	43077832	43078053	1	1	23	0
13	19	79267986	79306387	79306506	1	1	19	0
13	19	63027762	70794167	70794184	1	1	19	0
global files summary:
Homo_sapiens.glob01.13.minQN1.fac2.01.blastresult
Homo_sapiens.glob02.5.minQN1.fac2.01.blastresult
Homo_sapiens.glob03.4.minQN1.fac2.01.blastresult
Homo_sapiens.glob04.3.minQN1.fac2.01.blastresult
Homo_sapiens.glob05.1.minQN1.fac2.01.blastresult
Homo_sapiens.glob06.6.minQN1.fac2.01.blastresult
Homo_sapiens.glob07.9.minQN1.fac2.01.blastresult
Homo_sapiens.glob08.X.minQN1.fac2.01.blastresult
Homo_sapiens.glob09.X.minQN1.fac2.02.blastresult
Homo_sapiens.glob10.6.minQN1.fac2.02.blastresult
Homo_sapiens.glob11.17.minQN1.fac2.01.blastresult
Homo_sapiens.glob12.7.minQN1.fac2.01.blastresult
Homo_sapiens.glob13.19.minQN1.fac2.01.blastresult
Homo_sapiens.glob14.12.minQN1.fac2.01.blastresult
Homo_sapiens.glob15.2.minQN1.fac2.01.blastresult
Homo_sapiens.glob16.9.minQN1.fac2.02.blastresult
Homo_sapiens.glob17.10.minQN1.fac2.01.blastresult
Homo_sapiens.glob18.Y.minQN1.fac2.01.blastresult
Homo_sapiens.glob19.X.minQN1.fac2.03.blastresult
Homo_sapiens.glob20.8.minQN1.fac2.01.blastresult
Homo_sapiens.glob21.17.minQN1.fac2.02.blastresult
Homo_sapiens.glob22.17.minQN1.fac2.03.blastresult
Homo_sapiens.glob23.13.minQN1.fac2.02.blastresult
Homo_sapiens.glob24.22.minQN1.fac2.01.blastresult
Homo_sapiens.glob25.1.minQN1.fac2.02.blastresult
Homo_sapiens.glob26.19.minQN1.fac2.02.blastresult
Homo_sapiens.glob27.3.minQN1.fac2.02.blastresult
Homo_sapiens.glob28.7.minQN1.fac2.02.blastresult
Homo_sapiens.glob29.X.minQN1.fac2.04.blastresult
Homo_sapiens.glob30.5.minQN1.fac2.02.blastresult
Homo_sapiens.glob31.11.minQN1.fac2.01.blastresult
Homo_sapiens.glob32.19.minQN1.fac2.03.blastresult
Homo_sapiens.glob33.18.minQN1.fac2.01.blastresult
Homo_sapiens.glob34.4.minQN1.fac2.02.blastresult
Homo_sapiens.glob35.1.minQN1.fac2.03.blastresult
Homo_sapiens.glob36.18.minQN1.fac2.02.blastresult
Homo_sapiens.glob37.1.minQN1.fac2.04.blastresult
Homo_sapiens.glob38.2.minQN1.fac2.02.blastresult
Homo_sapiens.glob39.8.minQN1.fac2.02.blastresult
Homo_sapiens.glob40.10.minQN1.fac2.02.blastresult
Homo_sapiens.glob41.4.minQN1.fac2.03.blastresult
Homo_sapiens.glob42.9.minQN1.fac2.03.blastresult
Homo_sapiens.glob43.11.minQN1.fac2.02.blastresult
Homo_sapiens.glob44.16.minQN1.fac2.01.blastresult
Homo_sapiens.glob45.15.minQN1.fac2.01.blastresult
Homo_sapiens.glob46.14.minQN1.fac2.01.blastresult
Homo_sapiens.glob47.9.minQN1.fac2.04.blastresult
Homo_sapiens.glob48.c6_COX.minQN1.fac2.01.blastresult
Homo_sapiens.glob49.c6_QBL.minQN1.fac2.01.blastresult
Homo_sapiens.glob50.1.minQN1.fac2.05.blastresult
Homo_sapiens.glob51.2.minQN1.fac2.03.blastresult
Homo_sapiens.glob52.20.minQN1.fac2.01.blastresult
Homo_sapiens.glob53.2.minQN1.fac2.04.blastresult
Homo_sapiens.glob54.12.minQN1.fac2.02.blastresult
Homo_sapiens.glob55.2.minQN1.fac2.05.blastresult
Homo_sapiens.glob56.4.minQN1.fac2.04.blastresult
Homo_sapiens.glob57.3.minQN1.fac2.03.blastresult
Homo_sapiens.glob58.8.minQN1.fac2.03.blastresult
Homo_sapiens.glob59.8.minQN1.fac2.04.blastresult
Homo_sapiens.glob60.7.minQN1.fac2.03.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 2701091 nt (5'402'182 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome c6_QBL:
49	26280078	31655084	31655248	1	1	49	0	(marked for saving)
chromosome NT_113886:
54	1	25447	88291	1	5	138	1.1	(marked for saving)
chromosome 18:
286	6444150	9010027	9307798	1	4	393	5.5	(marked for saving)
225	17140506	18003720	18421185	1	5	334	7.7	(marked for saving)
180	50201970	55579770	55580114	1	1	180	0	(marked for saving)
48	35264887	37923244	37923694	1	2	90	0	(marked for saving)
chromosome NT_113965:
61	27012	36279	704008	1	14	382	12.3	(marked for saving)
chromosome Y:
169	2728112	2770206	2907311	2	13	702	2.5	(marked for saving)
111	16503722	21328052	21896620	1	7	500	10.5	(marked for saving)
chromosome 9:
259	94484479	96925624	98315676	3	12	535	25.7	(marked for saving)
203	8562488	9080898	9081242	1	1	203	0	(marked for saving)
202	30225310	30821879	30822223	1	1	202	0	(marked for saving)
199	115985235	119885086	119885493	1	1	199	0	(marked for saving)
52	1566639	2071829	2709151	1	9	304	11.7	(marked for saving)
47	33088476	37265715	37265855	1	1	47	0	(marked for saving)
43	74199218	76833673	76833848	1	2	78	0	(marked for saving)
43	124979898	127327538	127327712	1	2	71	0	(marked for saving)
37	129976933	135359097	135359266	1	2	70	0	(marked for saving)
chromosome 21:
203	31228724	31810363	36598158	3	15	511	88.6	(marked for saving)
123	39142947	39488386	44418960	2	11	391	91.2	(marked for saving)
56	24232875	26473652	26473813	1	1	56	0	(marked for saving)
50	13536519	15967422	17001360	1	6	178	19.1	(marked for saving)
chromosome 15:
458	45669733	47873733	48332335	1	10	1112	8.4	(marked for saving)
353	37188279	37619008	41955761	3	15	671	80.2	(marked for saving)
245	62173454	62672231	66865903	2	3	275	77.6	(marked for saving)
224	77677768	80089611	80090048	1	1	224	0	(marked for saving)
128	22224185	22483239	27348871	2	2	128	90	(marked for saving)
57	86591398	91297604	91985504	1	9	314	12.7	(marked for saving)
55	16930029	21440575	21440847	1	1	55	0	(marked for saving)
53	30192430	30777728	32426318	1	3	120	30.5	(marked for saving)
chromosome 11:
313	120063896	120626173	125443714	3	17	714	89.1	(marked for saving)
233	56128859	56381284	57464573	1	8	510	20	(marked for saving)
227	112797937	113959293	117218701	2	8	382	60.3	(marked for saving)
158	1566639	2932345	3878939	3	11	450	17.5	(marked for saving)
48	61531059	63708532	63708693	1	1	48	0	(marked for saving)
48	30846563	33418327	33418476	1	1	48	0	(marked for saving)
chromosome 4:
771	79709462	80050970	84562108	3	6	871	83.5	(marked for saving)
248	54076023	54136852	57914252	3	12	533	69.9	(marked for saving)
236	131165417	135340503	135341600	1	3	412	0	(marked for saving)
208	111717497	114354654	114354998	1	1	208	0	(marked for saving)
142	122386842	123980954	123981289	1	1	142	0	(marked for saving)
127	88866191	89471886	89837967	2	5	200	6.7	(marked for saving)
93	38976874	39651462	41795101	2	3	119	39.6	(marked for saving)
60	1	1387008	2237082	1	11	289	15.7	(marked for saving)
50	156582768	161973086	161973238	1	1	50	0	(marked for saving)
45	139916981	144666884	144681094	1	8	276	0.2	(marked for saving)
chromosome 3:
272	118711156	120500202	122008192	2	4	394	27.9	(marked for saving)
252	125544939	125935011	130810003	3	28	1049	90.2	(marked for saving)
127	181430698	181973454	185912000	2	2	127	72.9	(marked for saving)
115	138132065	142177481	143213796	2	9	305	19.1	(marked for saving)
106	154149588	155986883	156510263	1	2	125	9.6	(marked for saving)
71	49860117	51642639	52638896	1	8	282	18.4	(marked for saving)
54	193666681	198728377	199054894	1	2	73	6	(marked for saving)
chromosome 22:
149	25329595	25359934	30342685	2	5	241	92.2	(marked for saving)
142	39888524	40582816	43398541	2	17	522	52.1	(marked for saving)
114	31785224	31971742	37169251	2	15	528	96.2	(marked for saving)
100	14309107	14903220	18311104	2	12	350	63	(marked for saving)
50	44048218	46904077	49426072	1	5	187	46.6	(marked for saving)
36	19927395	21294328	21294497	1	2	71	0	(marked for saving)
chromosome 14:
194	19499040	20066151	20946556	2	12	489	16.2	(marked for saving)
169	99532633	100071220	104925736	2	16	488	89.8	(marked for saving)
120	65795894	66735568	70385410	2	3	162	67.5	(marked for saving)
112	74547458	76489073	77767715	2	7	235	23.6	(marked for saving)
96	81435263	81962541	85270436	2	6	176	61.2	(marked for saving)
61	27872450	29369725	31600447	1	3	137	41.2	(marked for saving)
55	58502924	60856838	63499263	1	4	172	48.9	(marked for saving)
44	85784034	89336904	90840625	1	5	181	27.8	(marked for saving)
chromosome 8:
469	91866771	93225495	96021367	3	17	959	51.7	(marked for saving)
322	99267785	101493256	102067657	2	14	762	10.6	(marked for saving)
261	59561615	59663533	62447004	2	11	548	51.5	(marked for saving)
214	46488291	48621923	50499470	2	7	521	34.7	(marked for saving)
193	115177264	119843275	119843619	1	1	193	0	(marked for saving)
177	138838900	143216934	144219379	2	5	284	18.5	(marked for saving)
153	77658985	82702059	82702404	1	2	175	0	(marked for saving)
138	34414374	36865152	36865505	1	1	138	0	(marked for saving)
46	25689821	30092518	30664149	1	2	73	10.5	(marked for saving)
44	103022314	107297169	107298673	1	2	87	0	(marked for saving)
chromosome 20:
276	1	494286	5119667	2	10	672	85.6	(marked for saving)
260	50645626	54610164	55225552	2	8	383	11.3	(marked for saving)
157	38220566	38259929	43577747	2	36	1118	98.4	(marked for saving)
63	30225310	30238601	34886721	1	4	214	86	(marked for saving)
56	55453584	60852748	60852927	1	1	56	0	(marked for saving)
53	8562488	11379840	11380016	1	1	53	0	(marked for saving)
44	20042163	25159368	25159519	1	2	73	0	(marked for saving)
19	43865865	44029612	44029647	1	1	19	0	(marked for saving)
chromosome 13:
610	45799616	47235752	51132978	3	10	832	72.1	(marked for saving)
607	22813255	24568367	28016335	3	32	1619	63.8	(marked for saving)
267	94608493	98227430	99990503	2	2	267	32.6	(marked for saving)
197	39560075	39566153	44942942	2	17	682	99.5	(marked for saving)
49	73620946	78897332	78897490	1	1	49	0	(marked for saving)
23	34157875	39312307	39312360	1	1	23	0	(marked for saving)
chromosome 7:
473	22419131	22779793	27443140	4	18	1195	86.3	(marked for saving)
278	93431050	94131003	98705660	3	13	582	84.6	(marked for saving)
260	121711567	122108605	127027177	2	2	260	91	(marked for saving)
120	16503722	20849774	20850106	1	1	120	0	(marked for saving)
67	145724346	150476699	151104603	1	9	255	11.6	(marked for saving)
66	135946364	137740074	141092850	1	3	137	62	(marked for saving)
63	1	1183638	5183813	1	3	174	74	(marked for saving)
62	70309634	70904662	75423495	1	6	258	83.6	(marked for saving)
55	83761112	86420111	86420290	1	1	55	0	(marked for saving)
53	40462479	41345139	45166398	1	3	128	70.7	(marked for saving)
52	51969165	52274905	57198898	1	3	120	91.1	(marked for saving)
49	102749845	103221525	105398765	1	4	168	40.3	(marked for saving)
chromosome 2:
274	171755485	171939690	176762987	2	11	719	89.2	(marked for saving)
233	145095628	147061571	148064037	2	4	327	18.5	(marked for saving)
218	14200322	15455013	19133906	2	2	218	68.1	(marked for saving)
211	60281088	63723907	64475348	1	5	405	13.9	(marked for saving)
176	86481758	86566284	91430669	2	5	284	90	(marked for saving)
170	127646522	127794948	128321128	2	3	201	9.7	(marked for saving)
154	103903853	105573342	106351764	2	5	271	14.4	(marked for saving)
108	208625500	208795210	208795606	1	2	142	0	(marked for saving)
103	231449795	231468491	236739721	2	10	311	97.5	(marked for saving)
102	48963479	49008063	54160789	2	2	102	95.3	(marked for saving)
96	35836133	40460052	40460453	1	1	96	0	(marked for saving)
88	112034164	112339846	112340453	1	2	155	0	(marked for saving)
76	43399213	48713606	48714011	1	2	114	0	(marked for saving)
62	225993573	230618697	231285901	1	8	267	12.3	(marked for saving)
57	116112825	119317083	119703856	1	4	129	7.1	(marked for saving)
55	5313703	5583633	5583794	1	1	55	0	(marked for saving)
49	218106361	219914917	219915090	1	1	49	0	(marked for saving)
chromosome 16:
206	72524536	73010857	73784646	1	6	449	14.3	(marked for saving)
184	8562488	13923693	13924037	1	1	184	0	(marked for saving)
176	28793727	30008256	32839294	3	18	586	52.4	(marked for saving)
171	1971804	2937545	7147502	2	6	324	77.9	(marked for saving)
169	62989653	65183381	68349129	3	8	317	58.6	(marked for saving)
132	43865865	45663444	47831364	2	21	729	40.1	(marked for saving)
120	51645033	51829754	56428815	2	11	419	85.1	(marked for saving)
53	17611173	19436792	20881735	1	3	133	26.7	(marked for saving)
50	83112848	88495453	88495596	1	1	50	0	(marked for saving)
47	79493374	79944187	79944324	1	1	47	0	(marked for saving)
36	21608801	26792018	26792193	1	2	69	0	(marked for saving)
chromosome 10:
322	30846563	31811615	32432227	1	4	462	11.4	(marked for saving)
279	89325378	89392344	94272715	3	13	617	90.3	(marked for saving)
279	123035106	124370028	128412018	3	11	513	74.8	(marked for saving)
174	100561954	102480132	105456903	3	12	440	55.1	(marked for saving)
167	37977467	38420701	42601109	2	7	392	77.3	(marked for saving)
159	94484479	95887590	96344579	2	10	469	8.4	(marked for saving)
136	71282030	72168699	76555585	1	10	478	81.2	(marked for saving)
132	58667893	59642446	59642815	1	2	154	0	(marked for saving)
59	1	216418	216567	1	1	59	0	(marked for saving)
54	46539954	49885752	50626296	1	14	455	13.7	(marked for saving)
chromosome 6:
316	109556617	110607448	114524396	3	25	1188	72.5	(marked for saving)
316	139538827	139735998	144563807	3	6	387	89.3	(marked for saving)
304	149694963	149857616	154939903	3	6	567	94	(marked for saving)
259	13262402	13319212	18400957	2	8	662	94	(marked for saving)
222	122386842	124729572	127046679	2	8	512	42.8	(marked for saving)
214	3079255	3424882	7451734	2	2	214	74.5	(marked for saving)
176	85381772	85624059	90514273	2	10	443	90.5	(marked for saving)
111	133407330	133952223	138756378	2	2	111	88.9	(marked for saving)
54	33088476	33690460	37889619	1	3	151	77.7	(marked for saving)
50	61531059	64423003	64423188	1	1	50	0	(marked for saving)
49	104829692	108154229	108275306	1	2	97	2.2	(marked for saving)
45	56128859	56747517	56747688	1	2	77	0	(marked for saving)
41	21851900	21949295	27241653	1	4	141	97.9	(marked for saving)
40	71038931	72830536	72830684	1	2	67	0	(marked for saving)
38	43865865	44291377	44770131	1	3	106	8.8	(marked for saving)
33	115985235	118016207	118016385	1	2	66	0	(marked for saving)
chromosome 12:
440	1512617	1561334	6671559	4	20	936	94.5	(marked for saving)
321	94484479	97345836	99472699	2	7	535	39.3	(marked for saving)
302	50645626	51517454	55841544	4	43	1628	80	(marked for saving)
271	30846563	32053640	33198794	3	5	374	21.1	(marked for saving)
247	57587453	58384886	62663164	2	11	589	79.1	(marked for saving)
243	8562488	9199905	13065804	2	2	243	71.5	(marked for saving)
164	43865865	45311175	49253814	2	6	273	72.9	(marked for saving)
144	63718950	64914723	68102992	2	3	163	59	(marked for saving)
124	74199218	74254587	75115772	2	15	535	15.9	(marked for saving)
103	83761112	86043994	86930510	1	9	413	16.4	(marked for saving)
68	90729950	93342276	93342707	1	1	68	0	(marked for saving)
52	117200730	119343493	122576745	1	3	126	59.8	(marked for saving)
52	17611173	19848593	19848745	1	1	52	0	(marked for saving)
chromosome 17:
330	4078662	4511179	9009091	5	43	1486	83.2	(marked for saving)
329	40786611	41041720	45961352	3	25	1263	91	(marked for saving)
148	72389481	76718048	77789060	2	24	755	19.8	(marked for saving)
101	58667893	60611899	63786002	2	5	187	58.7	(marked for saving)
73	67122336	69688192	71118201	1	20	580	26.4	(marked for saving)
54	13262402	16795710	18201262	1	3	122	26	(marked for saving)
49	34844191	36103631	36103804	1	1	49	0	(marked for saving)
48	54022001	56416926	56417095	1	2	74	0	(marked for saving)
chromosome 19:
568	35762565	35767613	41019680	3	50	2164	97.2	(marked for saving)
312	5159102	5194566	10528609	4	34	1359	98.7	(marked for saving)
110	45540547	45973847	50934504	2	14	550	91.8	(marked for saving)
110	10804401	10984622	15938561	2	16	549	91.7	(marked for saving)
50	30225310	35443835	35443987	1	1	50	0	(marked for saving)
48	16071546	16656626	19237478	1	5	183	47.7	(marked for saving)
chromosome 1:
375	90162752	91131137	91131757	1	1	375	0	(marked for saving)
353	112311772	113063718	117236002	4	15	809	77.2	(marked for saving)
298	216115045	216536383	218985847	3	11	560	45.3	(marked for saving)
293	205580755	206937325	210176598	3	7	459	59.9	(marked for saving)
241	57101288	58294396	60069414	2	3	276	32.8	(marked for saving)
235	20312306	20725069	23436551	2	12	602	50.1	(marked for saving)
211	51455989	52218733	52900855	2	3	242	12.6	(marked for saving)
203	36518906	38013887	41100425	3	18	750	57.1	(marked for saving)
182	146939874	147158952	152148235	3	5	268	92.3	(marked for saving)
151	172384236	173157872	177271410	2	8	407	76.1	(marked for saving)
121	27794353	27908998	33144246	2	15	590	96.9	(marked for saving)
118	197936642	199208886	199665111	1	6	282	8.4	(marked for saving)
117	43973942	45865160	47426051	2	10	374	28.8	(marked for saving)
91	5726366	5728793	11099207	2	16	532	99.4	(marked for saving)
54	226595313	227690432	231992183	1	7	292	79.6	(marked for saving)
52	165064255	170129828	170129971	1	1	52	0	(marked for saving)
48	220247728	223593404	224229670	1	4	141	11.7	(marked for saving)
48	95700007	99532687	101075330	1	3	121	28.5	(marked for saving)
25	324166	5510152	5510259	1	1	25	0	(marked for saving)
chromosome 5:
399	31919863	31944212	37121708	2	9	711	95.8	(marked for saving)
190	14848911	16955406	16955750	1	1	190	0	(marked for saving)
158	70437549	70788974	74707058	2	255	8919	72.5	(marked for saving)
132	144609755	145643081	149647577	2	11	403	74.1	(marked for saving)
105	76785134	80187151	80187423	1	1	105	0	(marked for saving)
98	138532280	138728500	141275946	2	11	376	47.1	(marked for saving)
92	172647173	173579702	178047018	2	5	173	82.6	(marked for saving)
56	98042791	98233364	98260033	1	7	262	0.4	(marked for saving)
53	110710950	113430251	113430394	1	1	53	0	(marked for saving)
51	158250310	159505963	159506142	1	1	51	0	(marked for saving)
50	37295052	37390432	37390569	1	1	50	0	(marked for saving)
49	63684799	68548661	68941840	1	14	503	7.2	(marked for saving)
48	162220927	166298556	166298711	1	1	48	0	(marked for saving)
34	151578593	153893702	154096102	1	2	67	3.7	(marked for saving)
23	26490652	31508080	31508196	1	1	23	0	(marked for saving)
chromosome X:
12816	68715985	69809470	73882210	25	172	21694	75.3	(marked for saving)
444	90432829	90577284	93167789	3	10	752	47.9	(marked for saving)
441	14639963	14906112	19088303	4	43	2354	77.4	(marked for saving)
326	21851900	21948855	27204133	3	7	524	97.2	(marked for saving)
241	118551280	118579452	123650369	3	9	468	93.8	(marked for saving)
205	74199218	75566276	78349892	3	12	452	51.5	(marked for saving)
172	124979898	127728082	128473641	2	15	539	13.8	(marked for saving)
138	135946364	137392986	141118941	2	8	560	68.9	(marked for saving)
137	146750764	148164784	152135823	2	21	1307	73.5	(marked for saving)
112	104829692	105596426	109584548	2	6	244	73.8	(marked for saving)
107	38976874	41894711	42801268	1	6	207	16.7	(marked for saving)
77	29955200	30137827	34987671	1	6	392	89.7	(marked for saving)
67	35303378	35639346	35730927	1	2	133	1.6	(marked for saving)
60	46539954	47348329	48720775	1	2	111	25.4	(marked for saving)
50	1	122601	3065437	1	4	165	54.4	(marked for saving)
47	131165417	135053101	135053232	1	1	47	0	(marked for saving)
46	99076349	99922012	99922162	1	2	70	0	(marked for saving)
41	111717497	116589058	116589221	1	2	73	0	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
X	12816	68715985	69809470	73882210	25	172	21694	75.3	(saved)
4	771	79709462	80050970	84562108	3	6	871	83.5	(saved)
13	610	45799616	47235752	51132978	3	10	832	72.1	(saved)
13	607	22813255	24568367	28016335	3	32	1619	63.8	(saved)
19	568	35762565	35767613	41019680	3	50	2164	97.2	(saved)
7	473	22419131	22779793	27443140	4	18	1195	86.3	(saved)
8	469	91866771	93225495	96021367	3	17	959	51.7	(saved)
15	458	45669733	47873733	48332335	1	10	1112	8.4	(saved)
X	444	90432829	90577284	93167789	3	10	752	47.9	(saved)
X	441	14639963	14906112	19088303	4	43	2354	77.4	(saved)
12	440	1512617	1561334	6671559	4	20	936	94.5	(saved)
5	399	31919863	31944212	37121708	2	9	711	95.8	(saved)
1	375	90162752	91131137	91131757	1	1	375	0	(saved)
15	353	37188279	37619008	41955761	3	15	671	80.2	(saved)
1	353	112311772	113063718	117236002	4	15	809	77.2	(saved)
17	330	4078662	4511179	9009091	5	43	1486	83.2	(saved)
17	329	40786611	41041720	45961352	3	25	1263	91	(saved)
X	326	21851900	21948855	27204133	3	7	524	97.2	(saved)
8	322	99267785	101493256	102067657	2	14	762	10.6	(saved)
10	322	30846563	31811615	32432227	1	4	462	11.4	(saved)
12	321	94484479	97345836	99472699	2	7	535	39.3	(saved)
6	316	109556617	110607448	114524396	3	25	1188	72.5	(saved)
6	316	139538827	139735998	144563807	3	6	387	89.3	(saved)
11	313	120063896	120626173	125443714	3	17	714	89.1	(saved)
19	312	5159102	5194566	10528609	4	34	1359	98.7	(saved)
6	304	149694963	149857616	154939903	3	6	567	94	(saved)
12	302	50645626	51517454	55841544	4	43	1628	80	(saved)
1	298	216115045	216536383	218985847	3	11	560	45.3	(saved)
1	293	205580755	206937325	210176598	3	7	459	59.9	(saved)
18	286	6444150	9010027	9307798	1	4	393	5.5	(saved)
10	279	89325378	89392344	94272715	3	13	617	90.3	(saved)
10	279	123035106	124370028	128412018	3	11	513	74.8	(saved)
7	278	93431050	94131003	98705660	3	13	582	84.6	(saved)
20	276	1	494286	5119667	2	10	672	85.6	(saved)
2	274	171755485	171939690	176762987	2	11	719	89.2	(saved)
3	272	118711156	120500202	122008192	2	4	394	27.9	(saved)
12	271	30846563	32053640	33198794	3	5	374	21.1	(saved)
13	267	94608493	98227430	99990503	2	2	267	32.6	(saved)
8	261	59561615	59663533	62447004	2	11	548	51.5	(saved)
20	260	50645626	54610164	55225552	2	8	383	11.3	(saved)
7	260	121711567	122108605	127027177	2	2	260	91	(saved)
9	259	94484479	96925624	98315676	3	12	535	25.7	(saved)
6	259	13262402	13319212	18400957	2	8	662	94	(saved)
3	252	125544939	125935011	130810003	3	28	1049	90.2	(saved)
4	248	54076023	54136852	57914252	3	12	533	69.9	(saved)
12	247	57587453	58384886	62663164	2	11	589	79.1	(saved)
15	245	62173454	62672231	66865903	2	3	275	77.6	(saved)
12	243	8562488	9199905	13065804	2	2	243	71.5	(saved)
1	241	57101288	58294396	60069414	2	3	276	32.8	(saved)
X	241	118551280	118579452	123650369	3	9	468	93.8	(saved)
4	236	131165417	135340503	135341600	1	3	412	0	(saved)
1	235	20312306	20725069	23436551	2	12	602	50.1	(saved)
11	233	56128859	56381284	57464573	1	8	510	20	(saved)
2	233	145095628	147061571	148064037	2	4	327	18.5	(saved)
11	227	112797937	113959293	117218701	2	8	382	60.3	(saved)
18	225	17140506	18003720	18421185	1	5	334	7.7	(saved)
15	224	77677768	80089611	80090048	1	1	224	0	(saved)
6	222	122386842	124729572	127046679	2	8	512	42.8	(saved)
2	218	14200322	15455013	19133906	2	2	218	68.1	(saved)
8	214	46488291	48621923	50499470	2	7	521	34.7	(saved)
6	214	3079255	3424882	7451734	2	2	214	74.5
2	211	60281088	63723907	64475348	1	5	405	13.9
1	211	51455989	52218733	52900855	2	3	242	12.6
4	208	111717497	114354654	114354998	1	1	208	0
16	206	72524536	73010857	73784646	1	6	449	14.3
X	205	74199218	75566276	78349892	3	12	452	51.5
9	203	8562488	9080898	9081242	1	1	203	0
21	203	31228724	31810363	36598158	3	15	511	88.6
1	203	36518906	38013887	41100425	3	18	750	57.1
9	202	30225310	30821879	30822223	1	1	202	0
9	199	115985235	119885086	119885493	1	1	199	0
13	197	39560075	39566153	44942942	2	17	682	99.5
14	194	19499040	20066151	20946556	2	12	489	16.2
8	193	115177264	119843275	119843619	1	1	193	0
5	190	14848911	16955406	16955750	1	1	190	0
16	184	8562488	13923693	13924037	1	1	184	0
1	182	146939874	147158952	152148235	3	5	268	92.3
18	180	50201970	55579770	55580114	1	1	180	0
8	177	138838900	143216934	144219379	2	5	284	18.5
2	176	86481758	86566284	91430669	2	5	284	90
16	176	28793727	30008256	32839294	3	18	586	52.4
6	176	85381772	85624059	90514273	2	10	443	90.5
10	174	100561954	102480132	105456903	3	12	440	55.1
X	172	124979898	127728082	128473641	2	15	539	13.8
16	171	1971804	2937545	7147502	2	6	324	77.9
2	170	127646522	127794948	128321128	2	3	201	9.7
Y	169	2728112	2770206	2907311	2	13	702	2.5
14	169	99532633	100071220	104925736	2	16	488	89.8
16	169	62989653	65183381	68349129	3	8	317	58.6
10	167	37977467	38420701	42601109	2	7	392	77.3
12	164	43865865	45311175	49253814	2	6	273	72.9
10	159	94484479	95887590	96344579	2	10	469	8.4
11	158	1566639	2932345	3878939	3	11	450	17.5
5	158	70437549	70788974	74707058	2	255	8919	72.5
20	157	38220566	38259929	43577747	2	36	1118	98.4
2	154	103903853	105573342	106351764	2	5	271	14.4
8	153	77658985	82702059	82702404	1	2	175	0
1	151	172384236	173157872	177271410	2	8	407	76.1
22	149	25329595	25359934	30342685	2	5	241	92.2
17	148	72389481	76718048	77789060	2	24	755	19.8
12	144	63718950	64914723	68102992	2	3	163	59
4	142	122386842	123980954	123981289	1	1	142	0
22	142	39888524	40582816	43398541	2	17	522	52.1
8	138	34414374	36865152	36865505	1	1	138	0
X	138	135946364	137392986	141118941	2	8	560	68.9
X	137	146750764	148164784	152135823	2	21	1307	73.5
10	136	71282030	72168699	76555585	1	10	478	81.2
16	132	43865865	45663444	47831364	2	21	729	40.1
10	132	58667893	59642446	59642815	1	2	154	0
5	132	144609755	145643081	149647577	2	11	403	74.1
15	128	22224185	22483239	27348871	2	2	128	90
4	127	88866191	89471886	89837967	2	5	200	6.7
3	127	181430698	181973454	185912000	2	2	127	72.9
12	124	74199218	74254587	75115772	2	15	535	15.9
21	123	39142947	39488386	44418960	2	11	391	91.2
1	121	27794353	27908998	33144246	2	15	590	96.9
14	120	65795894	66735568	70385410	2	3	162	67.5
7	120	16503722	20849774	20850106	1	1	120	0
16	120	51645033	51829754	56428815	2	11	419	85.1
1	118	197936642	199208886	199665111	1	6	282	8.4
1	117	43973942	45865160	47426051	2	10	374	28.8
3	115	138132065	142177481	143213796	2	9	305	19.1
22	114	31785224	31971742	37169251	2	15	528	96.2
14	112	74547458	76489073	77767715	2	7	235	23.6
X	112	104829692	105596426	109584548	2	6	244	73.8
Y	111	16503722	21328052	21896620	1	7	500	10.5
6	111	133407330	133952223	138756378	2	2	111	88.9
19	110	45540547	45973847	50934504	2	14	550	91.8
19	110	10804401	10984622	15938561	2	16	549	91.7
2	108	208625500	208795210	208795606	1	2	142	0
X	107	38976874	41894711	42801268	1	6	207	16.7
3	106	154149588	155986883	156510263	1	2	125	9.6
5	105	76785134	80187151	80187423	1	1	105	0
2	103	231449795	231468491	236739721	2	10	311	97.5
12	103	83761112	86043994	86930510	1	9	413	16.4
2	102	48963479	49008063	54160789	2	2	102	95.3
17	101	58667893	60611899	63786002	2	5	187	58.7
22	100	14309107	14903220	18311104	2	12	350	63
5	98	138532280	138728500	141275946	2	11	376	47.1
14	96	81435263	81962541	85270436	2	6	176	61.2
2	96	35836133	40460052	40460453	1	1	96	0
4	93	38976874	39651462	41795101	2	3	119	39.6
5	92	172647173	173579702	178047018	2	5	173	82.6
1	91	5726366	5728793	11099207	2	16	532	99.4
2	88	112034164	112339846	112340453	1	2	155	0
X	77	29955200	30137827	34987671	1	6	392	89.7
2	76	43399213	48713606	48714011	1	2	114	0
17	73	67122336	69688192	71118201	1	20	580	26.4
3	71	49860117	51642639	52638896	1	8	282	18.4
12	68	90729950	93342276	93342707	1	1	68	0
7	67	145724346	150476699	151104603	1	9	255	11.6
X	67	35303378	35639346	35730927	1	2	133	1.6
7	66	135946364	137740074	141092850	1	3	137	62
20	63	30225310	30238601	34886721	1	4	214	86
7	63	1	1183638	5183813	1	3	174	74
7	62	70309634	70904662	75423495	1	6	258	83.6
2	62	225993573	230618697	231285901	1	8	267	12.3
NT_113965	61	27012	36279	704008	1	14	382	12.3
14	61	27872450	29369725	31600447	1	3	137	41.2
4	60	1	1387008	2237082	1	11	289	15.7
X	60	46539954	47348329	48720775	1	2	111	25.4
10	59	1	216418	216567	1	1	59	0
15	57	86591398	91297604	91985504	1	9	314	12.7
2	57	116112825	119317083	119703856	1	4	129	7.1
21	56	24232875	26473652	26473813	1	1	56	0
20	56	55453584	60852748	60852927	1	1	56	0
5	56	98042791	98233364	98260033	1	7	262	0.4
15	55	16930029	21440575	21440847	1	1	55	0
14	55	58502924	60856838	63499263	1	4	172	48.9
7	55	83761112	86420111	86420290	1	1	55	0
2	55	5313703	5583633	5583794	1	1	55	0
NT_113886	54	1	25447	88291	1	5	138	1.1
3	54	193666681	198728377	199054894	1	2	73	6
10	54	46539954	49885752	50626296	1	14	455	13.7
6	54	33088476	33690460	37889619	1	3	151	77.7
17	54	13262402	16795710	18201262	1	3	122	26
1	54	226595313	227690432	231992183	1	7	292	79.6
15	53	30192430	30777728	32426318	1	3	120	30.5
20	53	8562488	11379840	11380016	1	1	53	0
7	53	40462479	41345139	45166398	1	3	128	70.7
16	53	17611173	19436792	20881735	1	3	133	26.7
5	53	110710950	113430251	113430394	1	1	53	0
9	52	1566639	2071829	2709151	1	9	304	11.7
7	52	51969165	52274905	57198898	1	3	120	91.1
12	52	117200730	119343493	122576745	1	3	126	59.8
12	52	17611173	19848593	19848745	1	1	52	0
1	52	165064255	170129828	170129971	1	1	52	0
5	51	158250310	159505963	159506142	1	1	51	0
21	50	13536519	15967422	17001360	1	6	178	19.1
4	50	156582768	161973086	161973238	1	1	50	0
22	50	44048218	46904077	49426072	1	5	187	46.6
16	50	83112848	88495453	88495596	1	1	50	0
6	50	61531059	64423003	64423188	1	1	50	0
19	50	30225310	35443835	35443987	1	1	50	0
5	50	37295052	37390432	37390569	1	1	50	0
X	50	1	122601	3065437	1	4	165	54.4
c6_QBL	49	26280078	31655084	31655248	1	1	49	0
13	49	73620946	78897332	78897490	1	1	49	0
7	49	102749845	103221525	105398765	1	4	168	40.3
2	49	218106361	219914917	219915090	1	1	49	0
6	49	104829692	108154229	108275306	1	2	97	2.2
17	49	34844191	36103631	36103804	1	1	49	0
5	49	63684799	68548661	68941840	1	14	503	7.2
18	48	35264887	37923244	37923694	1	2	90	0
11	48	61531059	63708532	63708693	1	1	48	0
11	48	30846563	33418327	33418476	1	1	48	0
17	48	54022001	56416926	56417095	1	2	74	0
19	48	16071546	16656626	19237478	1	5	183	47.7
1	48	220247728	223593404	224229670	1	4	141	11.7
1	48	95700007	99532687	101075330	1	3	121	28.5
5	48	162220927	166298556	166298711	1	1	48	0
9	47	33088476	37265715	37265855	1	1	47	0
16	47	79493374	79944187	79944324	1	1	47	0
X	47	131165417	135053101	135053232	1	1	47	0
8	46	25689821	30092518	30664149	1	2	73	10.5
X	46	99076349	99922012	99922162	1	2	70	0
4	45	139916981	144666884	144681094	1	8	276	0.2
6	45	56128859	56747517	56747688	1	2	77	0
14	44	85784034	89336904	90840625	1	5	181	27.8
8	44	103022314	107297169	107298673	1	2	87	0
20	44	20042163	25159368	25159519	1	2	73	0
9	43	74199218	76833673	76833848	1	2	78	0
9	43	124979898	127327538	127327712	1	2	71	0
6	41	21851900	21949295	27241653	1	4	141	97.9
X	41	111717497	116589058	116589221	1	2	73	0
6	40	71038931	72830536	72830684	1	2	67	0
6	38	43865865	44291377	44770131	1	3	106	8.8
9	37	129976933	135359097	135359266	1	2	70	0
22	36	19927395	21294328	21294497	1	2	71	0
16	36	21608801	26792018	26792193	1	2	69	0
5	34	151578593	153893702	154096102	1	2	67	3.7
6	33	115985235	118016207	118016385	1	2	66	0
1	25	324166	5510152	5510259	1	1	25	0
13	23	34157875	39312307	39312360	1	1	23	0
5	23	26490652	31508080	31508196	1	1	23	0
20	19	43865865	44029612	44029647	1	1	19	0
global files summary:
Homo_sapiens.glob01.X.minQN1.fac2.01.blastresult
Homo_sapiens.glob02.4.minQN1.fac2.01.blastresult
Homo_sapiens.glob03.13.minQN1.fac2.01.blastresult
Homo_sapiens.glob04.13.minQN1.fac2.02.blastresult
Homo_sapiens.glob05.19.minQN1.fac2.01.blastresult
Homo_sapiens.glob06.7.minQN1.fac2.01.blastresult
Homo_sapiens.glob07.8.minQN1.fac2.01.blastresult
Homo_sapiens.glob08.15.minQN1.fac2.01.blastresult
Homo_sapiens.glob09.X.minQN1.fac2.02.blastresult
Homo_sapiens.glob10.X.minQN1.fac2.03.blastresult
Homo_sapiens.glob11.12.minQN1.fac2.01.blastresult
Homo_sapiens.glob12.5.minQN1.fac2.01.blastresult
Homo_sapiens.glob13.1.minQN1.fac2.01.blastresult
Homo_sapiens.glob14.15.minQN1.fac2.02.blastresult
Homo_sapiens.glob15.1.minQN1.fac2.02.blastresult
Homo_sapiens.glob16.17.minQN1.fac2.01.blastresult
Homo_sapiens.glob17.17.minQN1.fac2.02.blastresult
Homo_sapiens.glob18.X.minQN1.fac2.04.blastresult
Homo_sapiens.glob19.8.minQN1.fac2.02.blastresult
Homo_sapiens.glob20.10.minQN1.fac2.01.blastresult
Homo_sapiens.glob21.12.minQN1.fac2.02.blastresult
Homo_sapiens.glob22.6.minQN1.fac2.01.blastresult
Homo_sapiens.glob23.6.minQN1.fac2.02.blastresult
Homo_sapiens.glob24.11.minQN1.fac2.01.blastresult
Homo_sapiens.glob25.19.minQN1.fac2.02.blastresult
Homo_sapiens.glob26.6.minQN1.fac2.03.blastresult
Homo_sapiens.glob27.12.minQN1.fac2.03.blastresult
Homo_sapiens.glob28.1.minQN1.fac2.03.blastresult
Homo_sapiens.glob29.1.minQN1.fac2.04.blastresult
Homo_sapiens.glob30.18.minQN1.fac2.01.blastresult
Homo_sapiens.glob31.10.minQN1.fac2.02.blastresult
Homo_sapiens.glob32.10.minQN1.fac2.03.blastresult
Homo_sapiens.glob33.7.minQN1.fac2.02.blastresult
Homo_sapiens.glob34.20.minQN1.fac2.01.blastresult
Homo_sapiens.glob35.2.minQN1.fac2.01.blastresult
Homo_sapiens.glob36.3.minQN1.fac2.01.blastresult
Homo_sapiens.glob37.12.minQN1.fac2.04.blastresult
Homo_sapiens.glob38.13.minQN1.fac2.03.blastresult
Homo_sapiens.glob39.8.minQN1.fac2.03.blastresult
Homo_sapiens.glob40.20.minQN1.fac2.02.blastresult
Homo_sapiens.glob41.7.minQN1.fac2.03.blastresult
Homo_sapiens.glob42.9.minQN1.fac2.01.blastresult
Homo_sapiens.glob43.6.minQN1.fac2.04.blastresult
Homo_sapiens.glob44.3.minQN1.fac2.02.blastresult
Homo_sapiens.glob45.4.minQN1.fac2.02.blastresult
Homo_sapiens.glob46.12.minQN1.fac2.05.blastresult
Homo_sapiens.glob47.15.minQN1.fac2.03.blastresult
Homo_sapiens.glob48.12.minQN1.fac2.06.blastresult
Homo_sapiens.glob49.1.minQN1.fac2.05.blastresult
Homo_sapiens.glob50.X.minQN1.fac2.05.blastresult
Homo_sapiens.glob51.4.minQN1.fac2.03.blastresult
Homo_sapiens.glob52.1.minQN1.fac2.06.blastresult
Homo_sapiens.glob53.11.minQN1.fac2.02.blastresult
Homo_sapiens.glob54.2.minQN1.fac2.02.blastresult
Homo_sapiens.glob55.11.minQN1.fac2.03.blastresult
Homo_sapiens.glob56.18.minQN1.fac2.02.blastresult
Homo_sapiens.glob57.15.minQN1.fac2.04.blastresult
Homo_sapiens.glob58.6.minQN1.fac2.05.blastresult
Homo_sapiens.glob59.2.minQN1.fac2.03.blastresult
Homo_sapiens.glob60.8.minQN1.fac2.04.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 3426964 nt (6'853'928 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome Y:
445	1	3610846	4730109	1	9	673	16.3	(marked for saving)
chromosome NT_113886:
55	1	40315	90604	1	12	305	0.7	(marked for saving)
chromosome 16:
225	3152841	4305878	9710892	2	9	464	78.8	(marked for saving)
82	74194551	81025997	81026483	1	3	168	0	(marked for saving)
chromosome c6_COX:
178	24692917	30175910	31517281	3	28	808	19.5	(marked for saving)
chromosome 18:
285	34271	378870	3981782	4	27	963	52.5	(marked for saving)
136	12302931	16953141	17435171	1	4	231	7	(marked for saving)
115	45167861	51140990	52008759	1	7	265	12.6	(marked for saving)
chromosome c6_QBL:
179	24533034	29159319	31379156	3	40	1059	32.3	(marked for saving)
chromosome 11:
301	58875861	59422234	64684429	2	9	627	76.7	(marked for saving)
299	71315871	71374982	77599327	3	12	707	90.8	(marked for saving)
142	4489371	6544975	9639040	1	6	415	45.1	(marked for saving)
132	96435781	102223389	102421648	1	3	193	2.8	(marked for saving)
83	119602301	125489614	126424742	1	7	283	13.6	(marked for saving)
56	31596941	36552202	36552564	1	1	56	0	(marked for saving)
54	19568171	21811067	21811721	1	3	123	0	(marked for saving)
chromosome 22:
345	17970053	22356451	24812213	3	41	1202	35.8	(marked for saving)
chromosome 14:
339	87641853	89070093	91593911	3	17	1019	36.8	(marked for saving)
143	61116873	64118740	67251673	1	13	589	45.7	(marked for saving)
116	75064763	77219301	77220020	1	3	166	0	(marked for saving)
113	25338993	30650531	30651132	1	2	170	0	(marked for saving)
85	96826213	101926096	103646133	1	17	574	25	(marked for saving)
53	48368433	54492084	54950466	1	7	214	6.6	(marked for saving)
chromosome X:
544	84064311	89254348	89255411	1	2	576	0	(marked for saving)
354	69842261	72661622	74876308	4	15	721	32.3	(marked for saving)
216	129540601	131605072	134398474	3	11	447	40.7	(marked for saving)
150	45442021	48013283	49532913	2	10	361	22.1	(marked for saving)
125	19568171	23126377	23563764	1	4	250	6.3	(marked for saving)
120	98423441	100482235	100482580	1	2	155	0	(marked for saving)
99	51953321	55529980	55531008	1	1	99	0	(marked for saving)
56	582591	3016271	3251985	1	6	251	3.4	(marked for saving)
48	14530481	14715146	15778319	1	9	276	15.5	(marked for saving)
45	143762651	150530795	150590327	1	5	177	0.8	(marked for saving)
chromosome 12:
359	51454896	51502988	56924909	5	39	1510	79.1	(marked for saving)
295	59131376	60456100	64956687	2	3	370	65.6	(marked for saving)
234	114922936	121372629	121766763	2	11	572	5.7	(marked for saving)
217	39426126	39868546	42241303	2	4	271	34.6	(marked for saving)
149	74518606	75578380	76149689	1	4	254	8.3	(marked for saving)
131	9748306	12044291	15261672	2	14	494	46.9	(marked for saving)
125	89597406	91086371	91086784	1	1	125	0	(marked for saving)
119	24175976	24686951	29702934	1	6	298	73.1	(marked for saving)
chromosome 17:
489	14530481	16340884	21348975	3	24	1143	73	(marked for saving)
417	3495541	3506031	10349013	5	45	1638	99.8	(marked for saving)
211	38073971	38484909	44833083	2	20	1169	92.6	(marked for saving)
92	64667491	70988606	71518225	1	4	163	7.7	(marked for saving)
64	21350211	24758434	25067768	1	5	165	4.5	(marked for saving)
44	48663401	52301069	52307292	1	8	242	0	(marked for saving)
chromosome 10:
382	119945001	121521221	126773569	5	57	1944	76.6	(marked for saving)
323	40952651	42291615	47153985	5	39	1425	70.9	(marked for saving)
149	66346721	69223599	69224011	1	2	176	0	(marked for saving)
148	25736771	28740962	29228355	1	3	233	7.1	(marked for saving)
121	109047141	111441595	112587535	1	8	377	16.7	(marked for saving)
74	48663401	50693207	50693608	1	1	74	0	(marked for saving)
62	96435781	97142624	98325579	1	9	306	17.2	(marked for saving)
48	4489371	6807322	7236204	1	3	88	6.2	(marked for saving)
chromosome 19:
427	2296091	2379606	9086635	5	73	2262	97.8	(marked for saving)
240	38759371	38771955	45602980	3	8	378	99.6	(marked for saving)
141	12302931	15296437	17561815	1	19	589	33	(marked for saving)
64	56031451	62332672	62851530	1	4	143	7.5	(marked for saving)
59	48663401	53933999	54303200	1	2	89	5.3	(marked for saving)
50	45613371	45662720	46457511	1	10	303	11.5	(marked for saving)
27	31836831	37838154	38587092	1	7	148	10.9	(marked for saving)
chromosome 7:
285	137868211	137980959	143696987	5	43	1555	83.3	(marked for saving)
245	94893631	95688456	100682454	4	17	699	72.8	(marked for saving)
148	19568171	20008977	20009392	1	2	213	0	(marked for saving)
143	110863451	115336995	116223405	3	17	577	12.9	(marked for saving)
132	151370591	154006010	158205619	2	16	535	61.2	(marked for saving)
86	25736771	27100725	27583106	1	17	932	7	(marked for saving)
84	582591	3344347	3344756	1	2	128	0	(marked for saving)
81	86223321	91468353	91564553	1	11	432	1.4	(marked for saving)
76	66346721	67743787	68255657	1	6	232	7.4	(marked for saving)
68	146915491	150476717	151030840	1	7	209	8	(marked for saving)
43	51953321	54594656	55234052	1	6	190	9.3	(marked for saving)
chromosome 8:
496	139220217	141814483	146047515	3	13	905	61.7	(marked for saving)
321	32640517	34851284	38956920	4	48	1694	59.9	(marked for saving)
288	55704227	56157815	61463096	4	29	1076	77.4	(marked for saving)
246	5978457	7177559	12574383	4	41	1833	78.7	(marked for saving)
225	100426577	102953246	102953953	1	1	225	0	(marked for saving)
168	18966787	22303326	23595011	2	2	168	18.8	(marked for saving)
167	47822127	48004732	54608806	2	3	236	96.3	(marked for saving)
105	132571837	134084035	134610650	1	6	235	7.6	(marked for saving)
67	89425907	95790347	95790606	1	2	117	0	(marked for saving)
56	68658287	74725932	74726270	1	1	56	0	(marked for saving)
chromosome 20:
273	29266581	29325838	35968644	4	74	2579	96.9	(marked for saving)
244	55585941	60899848	62424614	4	58	1892	22.2	(marked for saving)
135	3152841	3988288	4332824	1	5	241	5	(marked for saving)
123	12302931	17553498	18489474	1	11	365	13.6	(marked for saving)
chromosome 3:
782	45442021	45844938	50459815	4	23	1452	67.3	(marked for saving)
369	98423441	98812311	102971222	5	19	956	60.6	(marked for saving)
278	31528401	31588224	38238197	2	21	1131	97	(marked for saving)
251	15661391	17893986	21422697	2	3	284	51.4	(marked for saving)
246	148457641	148477309	155224774	3	10	535	98.4	(marked for saving)
183	191260871	197089597	198083521	3	17	599	14.5	(marked for saving)
175	582591	1922399	1922809	1	1	175	0	(marked for saving)
162	134681101	136158928	136450000	3	15	613	4.2	(marked for saving)
157	84064311	89017469	89582187	3	18	628	8.2	(marked for saving)
153	182556291	185114167	185781753	3	18	636	9.7	(marked for saving)
145	141363751	147024737	148077837	1	4	255	15.3	(marked for saving)
128	117237671	122892207	123248456	1	12	1084	5.1	(marked for saving)
67	169430881	169702116	170453777	1	8	275	10.9	(marked for saving)
58	64873111	65995148	66892651	1	6	195	13	(marked for saving)
20	24503051	31335590	31335643	1	1	20	0	(marked for saving)
chromosome 6:
382	24696024	24814335	31354477	5	23	936	95.4	(marked for saving)
284	5196394	7524492	11190514	2	13	910	53.4	(marked for saving)
283	107046834	107197114	112995880	4	24	911	84.6	(marked for saving)
245	87752824	87836596	94272616	3	12	524	93.9	(marked for saving)
219	115340174	115775519	118344648	3	43	1541	37.4	(marked for saving)
202	153037174	159867073	159867486	1	1	202	0	(marked for saving)
164	150604004	150889789	151191201	1	5	303	4.3	(marked for saving)
159	39123694	43067564	43379330	3	29	938	4.5	(marked for saving)
150	13044224	19251972	19252373	1	1	150	0	(marked for saving)
119	52351914	56524995	56593472	1	10	552	0.9	(marked for saving)
114	128225694	129002134	133452050	1	11	523	64.9	(marked for saving)
85	75072924	76079820	76164806	1	3	182	1.2	(marked for saving)
65	138061184	141764037	141822840	1	2	87	0.8	(marked for saving)
48	32372504	32921579	33426494	1	3	113	7.3	(marked for saving)
chromosome 15:
402	68579763	68746126	75258478	5	56	1955	95	(marked for saving)
172	82424843	85889965	89239768	3	55	1672	48.8	(marked for saving)
170	75433763	75606295	76943062	2	6	295	19.5	(marked for saving)
149	90478293	95006293	97318038	3	35	1047	33.7	(marked for saving)
125	55968403	56949214	62710778	1	24	1101	84	(marked for saving)
100	34446843	39175956	40234195	2	19	584	15.4	(marked for saving)
chromosome 13:
878	23666143	24831035	28860397	8	194	7414	58.7	(marked for saving)
157	71986843	72175896	78233786	1	7	441	88.3	(marked for saving)
135	93302783	93777813	96914655	2	5	247	45.7	(marked for saving)
117	65167113	70988973	71176785	1	3	158	2.7	(marked for saving)
112	103378163	109700717	110213435	1	5	224	7.4	(marked for saving)
66	47209633	48808096	49364083	1	2	88	8.1	(marked for saving)
chromosome 1:
500	61442493	61452024	68285454	6	34	1424	99.7	(marked for saving)
361	51332843	52418106	56777141	3	5	418	63.5	(marked for saving)
352	10003223	10037088	16849302	5	18	836	99.3	(marked for saving)
311	26726983	27812309	32523892	4	25	1123	68.7	(marked for saving)
289	16891493	16892766	23393900	4	33	1318	94.8	(marked for saving)
284	158666483	160583027	163912643	4	26	898	48.5	(marked for saving)
254	207981013	210291492	212892952	2	14	950	37.9	(marked for saving)
214	148968073	149062266	155476638	4	42	1528	93.5	(marked for saving)
186	173471123	177350634	177536326	3	14	577	2.7	(marked for saving)
185	37522033	37957717	42379634	2	8	458	64.5	(marked for saving)
146	201778143	202582530	202582945	1	2	208	0	(marked for saving)
112	180119503	184230593	184680228	2	14	554	6.5	(marked for saving)
91	93690563	94644541	94916890	1	3	152	3.9	(marked for saving)
74	108152503	108543910	109043826	1	4	147	7.2	(marked for saving)
71	216034463	222552035	222870393	1	4	154	4.6	(marked for saving)
64	45335593	47718005	48735931	1	10	407	14.8	(marked for saving)
24	142182613	148560760	148560936	1	1	24	0	(marked for saving)
22	68296493	68354115	68354204	1	1	22	0	(marked for saving)
chromosome 5:
741	170277941	170338956	177084843	6	55	2345	98.4	(marked for saving)
378	148036711	148405879	154852897	5	104	4166	94	(marked for saving)
165	29119811	31141624	34919381	2	12	743	55.1	(marked for saving)
143	105953151	108309085	109133234	3	20	679	12	(marked for saving)
115	61367881	66940303	67707617	1	5	241	11.1	(marked for saving)
90	163321131	165143161	169882452	2	9	309	69.1	(marked for saving)
86	114212221	118427035	119165226	1	4	185	10.7	(marked for saving)
68	74664641	75505123	75505761	1	1	68	0	(marked for saving)
chromosome 9:
568	109047141	111826985	112603056	4	25	1105	11.3	(marked for saving)
561	89410431	90289593	94915016	5	40	1773	67.4	(marked for saving)
323	128615311	131662946	135449966	4	188	5318	55.2	(marked for saving)
257	79917641	79984953	86760267	4	23	797	98.8	(marked for saving)
252	35606531	37026513	41104231	3	18	711	59.4	(marked for saving)
73	123029301	124622200	124622739	1	1	73	0	(marked for saving)
71	582591	2773171	2775116	1	4	168	0	(marked for saving)
42	6614111	13096967	13212456	1	26	806	1.6	(marked for saving)
20	73063641	79739990	79754682	1	2	39	0.2	(marked for saving)
chromosome 2:
357	95315587	97720369	101516989	5	40	1873	55.3	(marked for saving)
327	169921377	169927225	176763002	3	19	1178	99.7	(marked for saving)
187	128626027	128691696	135455519	3	9	366	98.6	(marked for saving)
184	105665127	108452569	112502567	3	21	861	59	(marked for saving)
174	143087967	148769601	148770682	1	3	373	0	(marked for saving)
153	219612877	222002939	223076085	3	15	538	15.6	(marked for saving)
144	229996687	232132922	236833067	2	4	201	68.5	(marked for saving)
142	56556217	60932957	62613623	1	4	297	24.5	(marked for saving)
129	180956317	186529562	186529972	1	1	129	0	(marked for saving)
107	178214717	178695218	179375314	2	215	7343	9.9	(marked for saving)
99	48605577	53630218	54111259	1	6	233	7	(marked for saving)
96	29757077	31367560	36380413	1	7	362	73.1	(marked for saving)
92	207378487	211997123	212182946	2	8	290	2.7	(marked for saving)
68	37227937	42613410	42613720	1	2	132	0	(marked for saving)
60	118036597	119317083	119706316	1	4	131	5.6	(marked for saving)
54	72560307	74187693	74596500	1	3	115	5.9	(marked for saving)
chromosome 4:
4103	51953321	53106294	57447064	20	387	26224	63.3	(marked for saving)
275	122720871	124886358	129026761	3	7	495	60.4	(marked for saving)
251	12714171	13152928	19424949	3	15	702	91.5	(marked for saving)
235	582591	649962	2413703	4	81	2357	25.7	(marked for saving)
183	32213801	37499442	37499849	1	1	183	0	(marked for saving)
180	61274761	62796671	66499245	3	14	522	54	(marked for saving)
146	45442021	47187757	47963950	2	17	610	11.3	(marked for saving)
111	163604981	166152971	166326737	1	3	178	2.5	(marked for saving)
99	139615981	140594830	144354955	2	4	172	54.8	(marked for saving)
87	4489371	8936445	8979849	1	10	860	0.6	(marked for saving)
68	98423441	99549528	104225039	1	6	238	68.2	(marked for saving)
57	179780421	186616314	186618023	1	2	114	0	(marked for saving)
52	109047141	115244543	115244827	1	1	52	0	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
4	4103	51953321	53106294	57447064	20	387	26224	63.3	(saved)
13	878	23666143	24831035	28860397	8	194	7414	58.7	(saved)
3	782	45442021	45844938	50459815	4	23	1452	67.3	(saved)
5	741	170277941	170338956	177084843	6	55	2345	98.4	(saved)
9	568	109047141	111826985	112603056	4	25	1105	11.3	(saved)
9	561	89410431	90289593	94915016	5	40	1773	67.4	(saved)
X	544	84064311	89254348	89255411	1	2	576	0	(saved)
1	500	61442493	61452024	68285454	6	34	1424	99.7	(saved)
8	496	139220217	141814483	146047515	3	13	905	61.7	(saved)
17	489	14530481	16340884	21348975	3	24	1143	73	(saved)
Y	445	1	3610846	4730109	1	9	673	16.3	(saved)
19	427	2296091	2379606	9086635	5	73	2262	97.8	(saved)
17	417	3495541	3506031	10349013	5	45	1638	99.8	(saved)
15	402	68579763	68746126	75258478	5	56	1955	95	(saved)
10	382	119945001	121521221	126773569	5	57	1944	76.6	(saved)
6	382	24696024	24814335	31354477	5	23	936	95.4	(saved)
5	378	148036711	148405879	154852897	5	104	4166	94	(saved)
3	369	98423441	98812311	102971222	5	19	956	60.6	(saved)
1	361	51332843	52418106	56777141	3	5	418	63.5	(saved)
12	359	51454896	51502988	56924909	5	39	1510	79.1	(saved)
2	357	95315587	97720369	101516989	5	40	1873	55.3	(saved)
X	354	69842261	72661622	74876308	4	15	721	32.3	(saved)
1	352	10003223	10037088	16849302	5	18	836	99.3	(saved)
22	345	17970053	22356451	24812213	3	41	1202	35.8	(saved)
14	339	87641853	89070093	91593911	3	17	1019	36.8	(saved)
2	327	169921377	169927225	176763002	3	19	1178	99.7	(saved)
10	323	40952651	42291615	47153985	5	39	1425	70.9	(saved)
9	323	128615311	131662946	135449966	4	188	5318	55.2	(saved)
8	321	32640517	34851284	38956920	4	48	1694	59.9	(saved)
1	311	26726983	27812309	32523892	4	25	1123	68.7	(saved)
11	301	58875861	59422234	64684429	2	9	627	76.7	(saved)
11	299	71315871	71374982	77599327	3	12	707	90.8	(saved)
12	295	59131376	60456100	64956687	2	3	370	65.6	(saved)
1	289	16891493	16892766	23393900	4	33	1318	94.8	(saved)
8	288	55704227	56157815	61463096	4	29	1076	77.4	(saved)
18	285	34271	378870	3981782	4	27	963	52.5	(saved)
7	285	137868211	137980959	143696987	5	43	1555	83.3	(saved)
6	284	5196394	7524492	11190514	2	13	910	53.4	(saved)
1	284	158666483	160583027	163912643	4	26	898	48.5	(saved)
6	283	107046834	107197114	112995880	4	24	911	84.6	(saved)
3	278	31528401	31588224	38238197	2	21	1131	97	(saved)
4	275	122720871	124886358	129026761	3	7	495	60.4	(saved)
20	273	29266581	29325838	35968644	4	74	2579	96.9	(saved)
9	257	79917641	79984953	86760267	4	23	797	98.8	(saved)
1	254	207981013	210291492	212892952	2	14	950	37.9	(saved)
9	252	35606531	37026513	41104231	3	18	711	59.4	(saved)
3	251	15661391	17893986	21422697	2	3	284	51.4	(saved)
4	251	12714171	13152928	19424949	3	15	702	91.5	(saved)
8	246	5978457	7177559	12574383	4	41	1833	78.7	(saved)
3	246	148457641	148477309	155224774	3	10	535	98.4	(saved)
7	245	94893631	95688456	100682454	4	17	699	72.8	(saved)
6	245	87752824	87836596	94272616	3	12	524	93.9	(saved)
20	244	55585941	60899848	62424614	4	58	1892	22.2	(saved)
19	240	38759371	38771955	45602980	3	8	378	99.6	(saved)
4	235	582591	649962	2413703	4	81	2357	25.7	(saved)
12	234	114922936	121372629	121766763	2	11	572	5.7	(saved)
16	225	3152841	4305878	9710892	2	9	464	78.8	(saved)
8	225	100426577	102953246	102953953	1	1	225	0	(saved)
6	219	115340174	115775519	118344648	3	43	1541	37.4	(saved)
12	217	39426126	39868546	42241303	2	4	271	34.6	(saved)
X	216	129540601	131605072	134398474	3	11	447	40.7
1	214	148968073	149062266	155476638	4	42	1528	93.5
17	211	38073971	38484909	44833083	2	20	1169	92.6
6	202	153037174	159867073	159867486	1	1	202	0
2	187	128626027	128691696	135455519	3	9	366	98.6
1	186	173471123	177350634	177536326	3	14	577	2.7
1	185	37522033	37957717	42379634	2	8	458	64.5
2	184	105665127	108452569	112502567	3	21	861	59
3	183	191260871	197089597	198083521	3	17	599	14.5
4	183	32213801	37499442	37499849	1	1	183	0
4	180	61274761	62796671	66499245	3	14	522	54
c6_QBL	179	24533034	29159319	31379156	3	40	1059	32.3
c6_COX	178	24692917	30175910	31517281	3	28	808	19.5
3	175	582591	1922399	1922809	1	1	175	0
2	174	143087967	148769601	148770682	1	3	373	0
15	172	82424843	85889965	89239768	3	55	1672	48.8
15	170	75433763	75606295	76943062	2	6	295	19.5
8	168	18966787	22303326	23595011	2	2	168	18.8
8	167	47822127	48004732	54608806	2	3	236	96.3
5	165	29119811	31141624	34919381	2	12	743	55.1
6	164	150604004	150889789	151191201	1	5	303	4.3
3	162	134681101	136158928	136450000	3	15	613	4.2
6	159	39123694	43067564	43379330	3	29	938	4.5
3	157	84064311	89017469	89582187	3	18	628	8.2
13	157	71986843	72175896	78233786	1	7	441	88.3
3	153	182556291	185114167	185781753	3	18	636	9.7
2	153	219612877	222002939	223076085	3	15	538	15.6
X	150	45442021	48013283	49532913	2	10	361	22.1
6	150	13044224	19251972	19252373	1	1	150	0
12	149	74518606	75578380	76149689	1	4	254	8.3
10	149	66346721	69223599	69224011	1	2	176	0
15	149	90478293	95006293	97318038	3	35	1047	33.7
10	148	25736771	28740962	29228355	1	3	233	7.1
7	148	19568171	20008977	20009392	1	2	213	0
1	146	201778143	202582530	202582945	1	2	208	0
4	146	45442021	47187757	47963950	2	17	610	11.3
3	145	141363751	147024737	148077837	1	4	255	15.3
2	144	229996687	232132922	236833067	2	4	201	68.5
14	143	61116873	64118740	67251673	1	13	589	45.7
7	143	110863451	115336995	116223405	3	17	577	12.9
5	143	105953151	108309085	109133234	3	20	679	12
11	142	4489371	6544975	9639040	1	6	415	45.1
2	142	56556217	60932957	62613623	1	4	297	24.5
19	141	12302931	15296437	17561815	1	19	589	33
18	136	12302931	16953141	17435171	1	4	231	7
20	135	3152841	3988288	4332824	1	5	241	5
13	135	93302783	93777813	96914655	2	5	247	45.7
11	132	96435781	102223389	102421648	1	3	193	2.8
7	132	151370591	154006010	158205619	2	16	535	61.2
12	131	9748306	12044291	15261672	2	14	494	46.9
2	129	180956317	186529562	186529972	1	1	129	0
3	128	117237671	122892207	123248456	1	12	1084	5.1
X	125	19568171	23126377	23563764	1	4	250	6.3
12	125	89597406	91086371	91086784	1	1	125	0
15	125	55968403	56949214	62710778	1	24	1101	84
20	123	12302931	17553498	18489474	1	11	365	13.6
10	121	109047141	111441595	112587535	1	8	377	16.7
X	120	98423441	100482235	100482580	1	2	155	0
12	119	24175976	24686951	29702934	1	6	298	73.1
6	119	52351914	56524995	56593472	1	10	552	0.9
13	117	65167113	70988973	71176785	1	3	158	2.7
14	116	75064763	77219301	77220020	1	3	166	0
18	115	45167861	51140990	52008759	1	7	265	12.6
5	115	61367881	66940303	67707617	1	5	241	11.1
6	114	128225694	129002134	133452050	1	11	523	64.9
14	113	25338993	30650531	30651132	1	2	170	0
13	112	103378163	109700717	110213435	1	5	224	7.4
1	112	180119503	184230593	184680228	2	14	554	6.5
4	111	163604981	166152971	166326737	1	3	178	2.5
2	107	178214717	178695218	179375314	2	215	7343	9.9
8	105	132571837	134084035	134610650	1	6	235	7.6
15	100	34446843	39175956	40234195	2	19	584	15.4
X	99	51953321	55529980	55531008	1	1	99	0
2	99	48605577	53630218	54111259	1	6	233	7
4	99	139615981	140594830	144354955	2	4	172	54.8
2	96	29757077	31367560	36380413	1	7	362	73.1
17	92	64667491	70988606	71518225	1	4	163	7.7
2	92	207378487	211997123	212182946	2	8	290	2.7
1	91	93690563	94644541	94916890	1	3	152	3.9
5	90	163321131	165143161	169882452	2	9	309	69.1
4	87	4489371	8936445	8979849	1	10	860	0.6
7	86	25736771	27100725	27583106	1	17	932	7
5	86	114212221	118427035	119165226	1	4	185	10.7
14	85	96826213	101926096	103646133	1	17	574	25
6	85	75072924	76079820	76164806	1	3	182	1.2
7	84	582591	3344347	3344756	1	2	128	0
11	83	119602301	125489614	126424742	1	7	283	13.6
16	82	74194551	81025997	81026483	1	3	168	0
7	81	86223321	91468353	91564553	1	11	432	1.4
7	76	66346721	67743787	68255657	1	6	232	7.4
10	74	48663401	50693207	50693608	1	1	74	0
1	74	108152503	108543910	109043826	1	4	147	7.2
9	73	123029301	124622200	124622739	1	1	73	0
1	71	216034463	222552035	222870393	1	4	154	4.6
9	71	582591	2773171	2775116	1	4	168	0
7	68	146915491	150476717	151030840	1	7	209	8
5	68	74664641	75505123	75505761	1	1	68	0
2	68	37227937	42613410	42613720	1	2	132	0
4	68	98423441	99549528	104225039	1	6	238	68.2
8	67	89425907	95790347	95790606	1	2	117	0
3	67	169430881	169702116	170453777	1	8	275	10.9
13	66	47209633	48808096	49364083	1	2	88	8.1
6	65	138061184	141764037	141822840	1	2	87	0.8
17	64	21350211	24758434	25067768	1	5	165	4.5
19	64	56031451	62332672	62851530	1	4	143	7.5
1	64	45335593	47718005	48735931	1	10	407	14.8
10	62	96435781	97142624	98325579	1	9	306	17.2
2	60	118036597	119317083	119706316	1	4	131	5.6
19	59	48663401	53933999	54303200	1	2	89	5.3
3	58	64873111	65995148	66892651	1	6	195	13
4	57	179780421	186616314	186618023	1	2	114	0
11	56	31596941	36552202	36552564	1	1	56	0
X	56	582591	3016271	3251985	1	6	251	3.4
8	56	68658287	74725932	74726270	1	1	56	0
NT_113886	55	1	40315	90604	1	12	305	0.7
11	54	19568171	21811067	21811721	1	3	123	0
2	54	72560307	74187693	74596500	1	3	115	5.9
14	53	48368433	54492084	54950466	1	7	214	6.6
4	52	109047141	115244543	115244827	1	1	52	0
19	50	45613371	45662720	46457511	1	10	303	11.5
X	48	14530481	14715146	15778319	1	9	276	15.5
10	48	4489371	6807322	7236204	1	3	88	6.2
6	48	32372504	32921579	33426494	1	3	113	7.3
X	45	143762651	150530795	150590327	1	5	177	0.8
17	44	48663401	52301069	52307292	1	8	242	0
7	43	51953321	54594656	55234052	1	6	190	9.3
9	42	6614111	13096967	13212456	1	26	806	1.6
19	27	31836831	37838154	38587092	1	7	148	10.9
1	24	142182613	148560760	148560936	1	1	24	0
1	22	68296493	68354115	68354204	1	1	22	0
3	20	24503051	31335590	31335643	1	1	20	0
9	20	73063641	79739990	79754682	1	2	39	0.2
global files summary:
Homo_sapiens.glob01.4.minQN1.fac2.01.blastresult
Homo_sapiens.glob02.13.minQN1.fac2.01.blastresult
Homo_sapiens.glob03.3.minQN1.fac2.01.blastresult
Homo_sapiens.glob04.5.minQN1.fac2.01.blastresult
Homo_sapiens.glob05.9.minQN1.fac2.01.blastresult
Homo_sapiens.glob06.9.minQN1.fac2.02.blastresult
Homo_sapiens.glob07.X.minQN1.fac2.01.blastresult
Homo_sapiens.glob08.1.minQN1.fac2.01.blastresult
Homo_sapiens.glob09.8.minQN1.fac2.01.blastresult
Homo_sapiens.glob10.17.minQN1.fac2.01.blastresult
Homo_sapiens.glob11.Y.minQN1.fac2.01.blastresult
Homo_sapiens.glob12.19.minQN1.fac2.01.blastresult
Homo_sapiens.glob13.17.minQN1.fac2.02.blastresult
Homo_sapiens.glob14.15.minQN1.fac2.01.blastresult
Homo_sapiens.glob15.10.minQN1.fac2.01.blastresult
Homo_sapiens.glob16.6.minQN1.fac2.01.blastresult
Homo_sapiens.glob17.5.minQN1.fac2.02.blastresult
Homo_sapiens.glob18.3.minQN1.fac2.02.blastresult
Homo_sapiens.glob19.1.minQN1.fac2.02.blastresult
Homo_sapiens.glob20.12.minQN1.fac2.01.blastresult
Homo_sapiens.glob21.2.minQN1.fac2.01.blastresult
Homo_sapiens.glob22.X.minQN1.fac2.02.blastresult
Homo_sapiens.glob23.1.minQN1.fac2.03.blastresult
Homo_sapiens.glob24.22.minQN1.fac2.01.blastresult
Homo_sapiens.glob25.14.minQN1.fac2.01.blastresult
Homo_sapiens.glob26.2.minQN1.fac2.02.blastresult
Homo_sapiens.glob27.10.minQN1.fac2.02.blastresult
Homo_sapiens.glob28.9.minQN1.fac2.03.blastresult
Homo_sapiens.glob29.8.minQN1.fac2.02.blastresult
Homo_sapiens.glob30.1.minQN1.fac2.04.blastresult
Homo_sapiens.glob31.11.minQN1.fac2.01.blastresult
Homo_sapiens.glob32.11.minQN1.fac2.02.blastresult
Homo_sapiens.glob33.12.minQN1.fac2.02.blastresult
Homo_sapiens.glob34.1.minQN1.fac2.05.blastresult
Homo_sapiens.glob35.8.minQN1.fac2.03.blastresult
Homo_sapiens.glob36.18.minQN1.fac2.01.blastresult
Homo_sapiens.glob37.7.minQN1.fac2.01.blastresult
Homo_sapiens.glob38.6.minQN1.fac2.02.blastresult
Homo_sapiens.glob39.1.minQN1.fac2.06.blastresult
Homo_sapiens.glob40.6.minQN1.fac2.03.blastresult
Homo_sapiens.glob41.3.minQN1.fac2.03.blastresult
Homo_sapiens.glob42.4.minQN1.fac2.02.blastresult
Homo_sapiens.glob43.20.minQN1.fac2.01.blastresult
Homo_sapiens.glob44.9.minQN1.fac2.04.blastresult
Homo_sapiens.glob45.1.minQN1.fac2.07.blastresult
Homo_sapiens.glob46.9.minQN1.fac2.05.blastresult
Homo_sapiens.glob47.3.minQN1.fac2.04.blastresult
Homo_sapiens.glob48.4.minQN1.fac2.03.blastresult
Homo_sapiens.glob49.8.minQN1.fac2.04.blastresult
Homo_sapiens.glob50.3.minQN1.fac2.05.blastresult
Homo_sapiens.glob51.7.minQN1.fac2.02.blastresult
Homo_sapiens.glob52.6.minQN1.fac2.04.blastresult
Homo_sapiens.glob53.20.minQN1.fac2.02.blastresult
Homo_sapiens.glob54.19.minQN1.fac2.02.blastresult
Homo_sapiens.glob55.4.minQN1.fac2.04.blastresult
Homo_sapiens.glob56.12.minQN1.fac2.03.blastresult
Homo_sapiens.glob57.16.minQN1.fac2.01.blastresult
Homo_sapiens.glob58.8.minQN1.fac2.05.blastresult
Homo_sapiens.glob59.6.minQN1.fac2.05.blastresult
Homo_sapiens.glob60.12.minQN1.fac2.04.blastresult

# Done!
# using /homes/biertank/joe/PROJECTS/SynBlast/ParaHOXexNEW/ParaHox_Danio_wublast/newRun/tblastn as source directory for the blastresult files...

########################################
# Probable Syntenic Regions
# -of maximum size 2 x 1654228 nt (3'308'456 nt)
# -containing at least 1 hits of different query
########################################
Regions sorted by SumOfMaxBitScoresPerQuery (and secondarily by totalScore) (only up to those with fullfilled QN-constraint, skipping overlapping ones):
SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofMaxRange
chromosome NT_113886:
67	16544	40249	68146	1	7	203	0.8	(marked for saving)
chromosome NT_113880:
37	16544	32938	160654	1	7	205	3.8	(marked for saving)
chromosome NT_113906:
100	1	5042	5446	1	8	735	0	(marked for saving)
chromosome NT_113929:
81	16544	59753	105452	1	10	607	1.3	(marked for saving)
chromosome NT_113890:
152	1	13779	113246	1	30	2706	3	(marked for saving)
chromosome 21:
285	17258473	19538868	19607298	1	2	305	2	(marked for saving)
108	23098152	23384233	24878018	1	41	1781	45.1	(marked for saving)
82	12775320	13304486	14639510	1	61	2176	40.3	(marked for saving)
74	25000597	26893000	27889302	1	8	215	30.1	(marked for saving)
66	31584711	32168057	32617288	1	9	245	13.5	(marked for saving)
60	40253243	42103594	43561069	1	88	2794	44	(marked for saving)
chromosome c6_COX:
600	28894961	29004804	32174996	4	187	6882	95.8	(marked for saving)
62	25536732	28712775	28835777	3	4	81	3.7	(marked for saving)
chromosome c6_QBL:
600	28983426	28999576	32280430	4	213	8556	99.1	(marked for saving)
chromosome 13:
467	33986238	34817745	36577393	3	16	1037	53.1	(marked for saving)
432	26872748	26896604	30178251	4	89	3246	99.1	(marked for saving)
316	101101189	104264679	104265418	1	2	355	0	(marked for saving)
221	75889657	76231644	76454052	1	3	415	6.7	(marked for saving)
216	86576435	88811635	89284296	2	7	543	14.2	(marked for saving)
204	17393609	17939219	20455825	3	75	2619	76	(marked for saving)
125	96981982	98400012	99987990	2	42	1983	47.9	(marked for saving)
104	110811930	112156820	114109057	2	10	334	59	(marked for saving)
64	70877128	72833781	72880457	1	2	86	1.4	(marked for saving)
23	30181348	30545481	30848216	1	4	86	9.1	(marked for saving)
chromosome 14:
172	64473048	64475986	67650716	2	26	1276	95.9	(marked for saving)
159	49088058	49807690	51854102	2	42	1932	61.8	(marked for saving)
135	17887960	18152438	21063611	2	78	3067	87.9	(marked for saving)
81	60883217	63617175	64060087	1	6	295	13.3	(marked for saving)
75	101115793	104133725	104408295	1	14	745	8.2	(marked for saving)
74	83133552	83341576	83366709	1	20	1107	0.7	(marked for saving)
71	27731045	29085853	29138085	1	4	154	1.5	(marked for saving)
67	89055946	89569254	90887352	1	9	253	39.8	(marked for saving)
66	97757564	98710289	100237045	1	37	1753	46.1	(marked for saving)
56	32958633	36120155	36120550	1	1	56	0	(marked for saving)
54	70990990	73441317	73457596	1	17	663	0.4	(marked for saving)
23	68079422	68204405	68204479	1	1	23	0	(marked for saving)
chromosome 22:
373	35937405	36072275	39056306	2	30	1303	90.1	(marked for saving)
348	21131420	21172263	24432437	3	67	2331	98.5	(marked for saving)
296	17243815	17253428	20131020	3	67	2829	86.9	(marked for saving)
129	46111350	46143289	49413022	2	40	1092	98.8	(marked for saving)
122	12611775	14744883	15810100	2	46	1478	32.1	(marked for saving)
70	28112566	28655867	30330856	1	20	688	50.6	(marked for saving)
23	24555821	24571958	24962969	1	2	46	11.8	(marked for saving)
19	42753121	46024316	46024444	1	1	19	0	(marked for saving)
chromosome 15:
565	82932485	82964890	86224663	3	44	4391	98.5	(marked for saving)
515	86257628	86273420	89238348	3	89	5433	89.6	(marked for saving)
489	95604423	96325924	98911970	4	24	1044	78.1	(marked for saving)
405	32410163	33060888	35287771	3	22	1890	67.3	(marked for saving)
234	38580702	39055597	41818493	3	33	1778	83.5	(marked for saving)
168	17389119	18579954	19371691	2	7	303	23.9	(marked for saving)
124	71997562	72868899	74340980	2	8	349	44.4	(marked for saving)
115	76149855	77671659	77748213	1	2	135	2.3	(marked for saving)
107	61972504	62004059	62821805	2	15	559	24.7	(marked for saving)
68	56083196	56687113	56812640	1	30	1313	3.7	(marked for saving)
60	27199118	29407074	30424537	1	34	1256	30.7	(marked for saving)
chromosome Y:
191	330861	2906889	2908085	1	7	1023	0	(marked for saving)
148	22713540	22989292	26014098	1	224	12535	91.4	(marked for saving)
120	6005110	6871958	9221813	1	171	8819	71	(marked for saving)
53	18031871	20622456	20929768	1	20	691	9.2	(marked for saving)
chromosome 11:
282	99638490	101660471	102725785	2	16	784	32.1	(marked for saving)
245	120416498	123101924	123104195	1	7	1389	0	(marked for saving)
225	44186354	46549341	46683782	1	9	1447	4	(marked for saving)
221	95287681	95763456	97942749	2	26	2188	65.8	(marked for saving)
193	62482912	62993424	65319310	2	61	3320	70.3	(marked for saving)
177	20513321	20582378	23772057	2	62	3450	96.4	(marked for saving)
158	6799174	6920896	9486968	1	57	4086	77.5	(marked for saving)
152	77024209	77773589	77774397	1	11	1330	0	(marked for saving)
146	69215913	71204930	71973432	2	33	1891	23.2	(marked for saving)
126	397033	418501	3349512	2	32	1265	88.5	(marked for saving)
105	40034061	40423295	40425267	1	16	1022	0	(marked for saving)
88	126305806	128670390	129613630	1	69	3730	28.5	(marked for saving)
80	112045740	113532210	113626433	1	50	2290	2.8	(marked for saving)
75	10223575	10988198	11331134	1	4	152	10.3	(marked for saving)
56	32771684	33265101	33589815	1	4	135	9.8	(marked for saving)
55	80365895	82121260	82555375	1	2	97	13.1	(marked for saving)
39	65377937	66827721	67796446	1	6	201	29.2	(marked for saving)
chromosome 12:
498	16427200	16928142	19257951	2	36	2308	70.4	(marked for saving)
484	63409320	63548003	66658353	3	7	594	94	(marked for saving)
409	51415645	51565480	54715316	3	101	4668	95.2	(marked for saving)
389	128985772	131629014	132289533	1	79	12567	19.9	(marked for saving)
374	77024209	78946838	78947542	1	1	374	0	(marked for saving)
171	74708189	75639509	75640197	1	2	300	0	(marked for saving)
158	55634110	55682857	56930204	2	67	2711	37.7	(marked for saving)
155	66999151	67168272	67366352	2	6	297	5.9	(marked for saving)
140	120416498	123062528	123062995	1	8	1022	0	(marked for saving)
139	44186354	46990455	47025527	1	30	1580	1	(marked for saving)
115	40034061	42688714	42689361	1	12	981	0	(marked for saving)
112	110755386	110792368	113852123	2	5	203	92.4	(marked for saving)
95	5856223	6648437	8271704	1	73	3595	49	(marked for saving)
66	83145119	83611878	83937236	1	13	531	9.8	(marked for saving)
63	1	171917	543608	1	24	1098	11.2	(marked for saving)
60	106040631	106652228	107153921	1	31	1472	15.1	(marked for saving)
57	35153876	36255653	36256458	1	2	95	0	(marked for saving)
23	48173217	51197295	51411055	1	2	44	6.4	(marked for saving)
chromosome 17:
573	46419659	46604965	49387723	2	61	6125	84.1	(marked for saving)
545	13317116	13340269	16478789	2	57	8430	94.8	(marked for saving)
501	3920692	4007841	7228842	3	140	13707	97.3	(marked for saving)
234	71250702	71938097	71938801	1	1	234	0	(marked for saving)
163	9942344	11715441	11955522	1	15	1647	7.2	(marked for saving)
158	40000975	40029226	43280062	2	10	657	98.2	(marked for saving)
154	612092	1907944	3802569	3	13	787	57.2	(marked for saving)
152	16592630	16693506	18821869	1	36	2968	64.3	(marked for saving)
138	43293032	43357726	45994398	2	65	2844	79.6	(marked for saving)
125	36593117	39074813	39798645	2	8	327	21.8	(marked for saving)
125	26137941	26147414	29389694	2	3	147	97.9	(marked for saving)
117	32771684	33737971	35588028	2	41	1507	55.9	(marked for saving)
101	75270651	77513391	78565139	1	14	616	31.7	(marked for saving)
73	51978107	53415019	53415585	1	12	593	0	(marked for saving)
73	7328550	7532809	8050930	2	6	200	15.6	(marked for saving)
68	55634110	58519260	58520011	1	8	335	0	(marked for saving)
61	22730083	25118277	25902817	1	13	549	23.7	(marked for saving)
60	20794552	21782338	21783153	1	2	91	0	(marked for saving)
chromosome 18:
332	20298262	20340993	23590626	3	82	5025	98.2	(marked for saving)
239	29231482	29572507	31203596	2	81	6262	49.3	(marked for saving)
128	4516240	5280959	5281393	1	10	1188	0	(marked for saving)
119	43756236	43810070	46506415	2	19	913	81.4	(marked for saving)
98	1	257409	1527352	2	15	487	38.3	(marked for saving)
85	13085514	14095699	15263240	1	68	2969	35.2	(marked for saving)
79	71548476	72212336	74856453	1	197	9229	79.9	(marked for saving)
70	7328550	9775109	9777805	1	37	1975	0	(marked for saving)
67	47147551	49922616	49922780	1	1	67	0	(marked for saving)
56	68024817	69883407	71129332	1	48	1739	37.6	(marked for saving)
22	23689577	23729804	24189420	1	2	44	13.8	(marked for saving)
chromosome 8:
640	142948064	144403479	146244745	3	284	32970	55.6	(marked for saving)
488	123245351	123850715	126517787	2	12	2790	80.6	(marked for saving)
340	54641530	55771518	57275282	4	28	1361	45.4	(marked for saving)
250	86470262	87129957	88949954	2	8	648	55	(marked for saving)
227	7130034	7202632	10417002	2	25	2241	97.1	(marked for saving)
201	10488263	10507330	12261587	3	44	2242	53	(marked for saving)
188	71118358	71126878	74367591	2	23	1220	97.9	(marked for saving)
183	91697850	92331149	94939351	2	23	1286	78.8	(marked for saving)
139	20794552	22603970	23673782	2	13	900	32.3	(marked for saving)
111	36593117	37944337	39054934	2	30	935	33.5	(marked for saving)
106	133138065	135646758	135684348	1	14	842	1.1	(marked for saving)
85	40034061	42699991	42812489	1	2	111	3.4	(marked for saving)
58	99638490	100030855	100040977	1	31	1392	0.3	(marked for saving)
58	47147551	49993841	49995437	1	14	683	0	(marked for saving)
58	1	182893	440162	1	15	582	7.7	(marked for saving)
55	126735924	127664209	127664394	1	1	55	0	(marked for saving)
51	140565872	141814513	142138116	1	6	195	9.7	(marked for saving)
44	25757452	26607244	27824568	1	8	240	36.7	(marked for saving)
21	74393872	74830042	74830158	1	1	21	0	(marked for saving)
chromosome 20:
385	496291	592321	3715121	4	27	1420	94.3	(marked for saving)
336	41638732	44012501	44566780	1	97	7532	16.7	(marked for saving)
259	23226373	23293969	26200799	1	72	5092	87.8	(marked for saving)
233	28602848	29396419	31842669	4	80	2949	73.9	(marked for saving)
221	59008882	60455283	62316403	4	53	1682	56.2	(marked for saving)
172	18164215	18214482	21441145	2	55	3144	97.5	(marked for saving)
119	51498360	51627114	54390036	2	19	722	83.5	(marked for saving)
106	47114465	48033932	50210345	1	85	5366	65.7	(marked for saving)
103	32771684	33663074	35750625	2	17	564	63	(marked for saving)
57	54525729	55517023	55527873	1	58	2196	0.3	(marked for saving)
46	14673642	17953391	17970334	1	16	619	0.5	(marked for saving)
chromosome 2:
459	132359096	132561329	135455552	4	40	3064	87.4	(marked for saving)
422	94707228	94780234	97907543	3	112	6941	94.5	(marked for saving)
411	37220303	37334854	40010572	3	15	1111	80.8	(marked for saving)
355	49197435	49388815	52158082	2	47	2351	83.7	(marked for saving)
306	176313847	176653777	179309113	4	49	1973	80.2	(marked for saving)
298	202269814	203613082	204639381	2	28	2303	31	(marked for saving)
266	109612471	110101678	112502594	4	35	1613	72.5	(marked for saving)
254	219143674	219211441	222114676	4	59	2890	87.7	(marked for saving)
179	162219211	163129253	163718063	1	5	320	17.7	(marked for saving)
139	10023611	10106068	13252143	2	8	368	95	(marked for saving)
117	44780454	47220129	47220341	1	1	117	0	(marked for saving)
114	235736303	236232002	239031035	2	10	380	84.6	(marked for saving)
106	27062901	27454060	27455258	1	22	1782	0	(marked for saving)
91	215851617	218333518	218334256	1	4	182	0	(marked for saving)
88	103342674	103510573	106191991	1	56	2907	81	(marked for saving)
86	210375884	210382037	213622862	1	16	1069	97.9	(marked for saving)
84	127892486	128314652	131159250	2	5	256	85.9	(marked for saving)
78	70670249	73372159	73372476	1	10	715	0	(marked for saving)
78	170689227	171281771	171282157	1	9	649	0	(marked for saving)
78	86088325	87300232	87735936	1	3	155	13.1	(marked for saving)
74	172475871	174909957	174910397	1	6	411	0	(marked for saving)
72	80397533	83299552	83299740	1	1	72	0	(marked for saving)
66	155817070	157775411	157776116	1	2	95	0	(marked for saving)
64	58147198	60541079	60542428	1	21	1140	0	(marked for saving)
62	142979702	144863902	144875395	1	27	1152	0.3	(marked for saving)
58	79355324	79627726	79628764	1	9	402	0	(marked for saving)
54	18592885	19415451	19416540	1	15	663	0	(marked for saving)
53	119091610	121452474	121456938	1	15	621	0.1	(marked for saving)
42	194329174	196712591	196729640	1	4	138	0.5	(marked for saving)
chromosome 10:
628	73213626	74664257	75359239	4	41	2579	21	(marked for saving)
557	100641920	100797386	103910686	5	30	1352	94.1	(marked for saving)
520	35346699	35461750	38539252	3	140	9112	93	(marked for saving)
483	41533781	42150505	44819476	3	195	15095	80.6	(marked for saving)
236	87473692	90368022	90368672	1	1	236	0	(marked for saving)
177	111427956	112008282	112492393	1	5	394	14.6	(marked for saving)
169	123074228	123233220	126302105	3	26	872	92.7	(marked for saving)
146	28663327	28667618	31855820	1	77	3812	96.3	(marked for saving)
125	128682305	131970635	131974864	1	30	2156	0.1	(marked for saving)
114	94421752	94965466	96126546	1	26	1302	35	(marked for saving)
94	79152563	79162981	82049227	1	40	2447	87.2	(marked for saving)
82	62262160	64243117	64243416	1	11	822	0	(marked for saving)
57	10796887	12748742	13827944	1	11	335	32.6	(marked for saving)
37	104016692	104155298	104155630	1	1	37	0	(marked for saving)
26	32120814	35042976	35043116	1	1	26	0	(marked for saving)
24	119897972	122781718	122781816	1	1	24	0	(marked for saving)
chromosome X:
609	133204237	134096743	136478899	3	102	7227	72	(marked for saving)
596	71416132	71438483	74721503	5	16	909	99.2	(marked for saving)
514	46154971	46207124	49318996	2	176	15422	94	(marked for saving)
411	149317119	151485376	152613538	3	31	2262	34	(marked for saving)
402	24136238	24138269	26641577	2	9	1161	75.6	(marked for saving)
295	77024209	77905409	77906049	1	2	314	0	(marked for saving)
277	99638490	100494838	102230833	3	65	3867	52.4	(marked for saving)
274	83045861	83206635	86030508	3	10	790	85.3	(marked for saving)
245	13085514	13306811	15484194	3	15	591	65.8	(marked for saving)
223	90936872	92715574	92716231	1	2	260	0	(marked for saving)
185	50340350	51617000	53122539	2	47	2375	45.5	(marked for saving)
155	113005234	114204716	116024463	2	35	1570	55	(marked for saving)
145	55700282	56327470	57952781	1	10	964	49.1	(marked for saving)
130	146091234	147353894	147354637	1	1	130	0	(marked for saving)
126	18495075	20084148	21785633	2	14	774	51.4	(marked for saving)
97	120350326	123134532	123135963	1	19	1187	0	(marked for saving)
80	125925317	127059936	128838843	1	23	904	53.7	(marked for saving)
67	32771684	34696282	34696743	1	5	297	0	(marked for saving)
65	40034061	41086754	41597426	1	10	340	15.4	(marked for saving)
60	116727409	119272703	119273065	1	2	116	0	(marked for saving)
57	63227347	63281648	66512084	1	39	1588	97.6	(marked for saving)
56	29909745	30750792	30751031	1	2	112	0	(marked for saving)
49	1207640	2748242	3583437	1	7	205	25.2	(marked for saving)
22	68057903	71266705	71326700	1	2	44	1.8	(marked for saving)
chromosome 16:
821	1488871	1695857	4742914	6	178	17709	92	(marked for saving)
688	29611971	29726172	32804166	5	240	21616	93	(marked for saving)
443	65377937	66203342	67156126	2	61	3943	28.7	(marked for saving)
389	25029560	25158716	28284040	3	16	1752	94.4	(marked for saving)
369	17552124	17652143	20076973	2	7	521	73.2	(marked for saving)
355	71250702	73758157	73761799	1	5	1348	0.1	(marked for saving)
332	69215913	70039500	70453397	1	31	3187	12.5	(marked for saving)
327	53351176	53443123	56589457	2	27	2444	95	(marked for saving)
316	85031021	87272348	88331815	1	29	2682	32	(marked for saving)
283	8188786	8312965	11029119	2	9	485	82	(marked for saving)
172	33086001	33100072	34539914	2	44	2808	43.5	(marked for saving)
110	47147551	47310316	49732289	1	37	2286	73.2	(marked for saving)
82	20794552	22102407	22834345	1	9	272	22.1	(marked for saving)
chromosome 9:
529	92968111	93020028	96103449	4	62	6357	93.1	(marked for saving)
442	112455765	112484831	114852030	3	62	4809	71.5	(marked for saving)
430	100958380	103201984	103211737	1	8	2340	0.2	(marked for saving)
428	39219904	39436156	42468680	1	41	4493	91.6	(marked for saving)
363	14024915	15351436	15352134	1	1	363	0	(marked for saving)
317	97699409	98196903	99001590	1	81	5372	24.3	(marked for saving)
315	131562930	131612272	134856240	5	159	5451	98	(marked for saving)
287	3172707	3354332	6419716	4	21	948	92.6	(marked for saving)
254	69063476	69120108	72217874	2	46	2546	93.6	(marked for saving)
249	77467320	77767051	78092817	1	4	421	9.8	(marked for saving)
199	114904129	116498021	116498413	1	1	199	0	(marked for saving)
122	128254330	128635633	131552337	2	40	2710	88.1	(marked for saving)
119	84547724	85871096	87334602	2	21	686	44.2	(marked for saving)
110	89543710	91396275	92690731	2	12	400	39.1	(marked for saving)
85	123407231	124712937	124721461	1	14	1089	0.2	(marked for saving)
81	42908993	43013223	46192802	1	26	1341	96.1	(marked for saving)
78	34207375	35136964	37430772	1	35	1431	69.3	(marked for saving)
71	65787962	66098417	68775619	1	38	1635	80.9	(marked for saving)
58	108253843	109287859	109289226	1	12	563	0	(marked for saving)
56	20675201	20728485	23946436	1	25	936	97.2	(marked for saving)
chromosome 6:
868	28040386	28164379	30975037	5	301	27415	84.9	(marked for saving)
531	85808542	86305591	89031958	4	17	1290	82.4	(marked for saving)
399	42300452	42731304	45174977	4	30	1198	73.8	(marked for saving)
380	33086001	33291438	36088126	3	56	2971	84.5	(marked for saving)
320	24731786	26744719	27533170	1	80	9496	23.8	(marked for saving)
281	109630462	109755074	112756003	4	66	2766	90.7	(marked for saving)
251	114477561	114485120	117747978	3	27	1082	98.6	(marked for saving)
229	16592630	17014324	18190339	1	9	559	35.5	(marked for saving)
212	149333662	149375040	151729167	3	13	532	71.1	(marked for saving)
149	9942344	10178181	12239235	2	14	595	62.2	(marked for saving)
126	3953778	3976796	7193972	2	20	996	97.2	(marked for saving)
98	93037833	93836898	94595751	2	10	361	22.9	(marked for saving)
86	163477927	165672733	166782303	2	18	571	33.5	(marked for saving)
78	142716462	143127606	145853571	1	37	1752	82.3	(marked for saving)
68	106040631	106660852	106661718	1	19	1107	0	(marked for saving)
67	99638490	100168952	100169221	1	5	314	0	(marked for saving)
66	156744926	159110830	159575140	1	3	116	14	(marked for saving)
48	612092	2711006	3696619	1	4	146	29.7	(marked for saving)
26	117753075	117815748	117936655	1	2	49	3.6	(marked for saving)
chromosome 4:
1063	113766212	114061442	116595166	3	39	3065	76.5	(marked for saving)
810	1	49320	2262042	6	212	7940	66.8	(marked for saving)
633	118795284	119174260	121959118	5	109	4864	84.1	(marked for saving)
459	150938333	151362320	153911561	3	12	714	77	(marked for saving)
321	100597984	101130920	103602607	2	21	1565	74.7	(marked for saving)
280	54360299	54465616	57491074	4	117	4865	91.4	(marked for saving)
274	22845884	23066912	25980393	2	26	2570	88	(marked for saving)
229	108488995	111540381	111559109	2	31	2807	0.5	(marked for saving)
224	8188786	8994505	11010580	2	22	1825	60.9	(marked for saving)
201	75121764	76339098	78223259	2	2	201	56.9	(marked for saving)
175	127893934	128610491	129514257	2	6	267	27.3	(marked for saving)
138	3556746	3852164	4915690	2	43	1699	32.1	(marked for saving)
129	80365895	81526750	82275476	2	13	683	22.6	(marked for saving)
119	87611729	90253155	90254309	1	2	145	0	(marked for saving)
99	65377937	65884289	66517253	2	8	304	19.1	(marked for saving)
94	46419659	47768291	47842378	2	22	752	2.2	(marked for saving)
89	173023238	175697055	175697793	1	10	733	0	(marked for saving)
79	185860606	188876567	189161873	1	8	538	8.6	(marked for saving)
78	161228079	161751068	162329593	1	5	189	17.4	(marked for saving)
75	36593117	38372835	39448485	1	11	693	32.5	(marked for saving)
71	83045861	85384123	85384931	1	8	454	0	(marked for saving)
70	146091234	146901759	147032997	1	31	1133	3.9	(marked for saving)
61	106040631	106785825	106818528	1	6	275	0.9	(marked for saving)
chromosome 7:
618	98761711	98915217	102055140	6	91	11230	94.9	(marked for saving)
517	54641530	54656910	57534719	5	105	5832	86.9	(marked for saving)
488	106040631	106792367	107938653	2	30	1423	34.6	(marked for saving)
403	147298873	148398520	150604708	2	107	13924	66.6	(marked for saving)
314	141690796	141749601	144908590	3	33	1186	95.4	(marked for saving)
280	4516240	5063437	7085569	1	98	12863	61.1	(marked for saving)
193	127893934	128523795	131001154	2	9	649	74.8	(marked for saving)
191	17552124	17883505	20790937	3	14	627	87.8	(marked for saving)
190	72309454	72429607	75390593	3	9	421	89.4	(marked for saving)
187	82169082	82422655	84783383	2	10	519	71.3	(marked for saving)
186	43094516	43413899	46151828	2	25	1212	82.7	(marked for saving)
169	32771684	34716909	34717613	1	4	299	0	(marked for saving)
137	48636421	50417731	51295355	2	14	760	26.5	(marked for saving)
124	61936993	62184857	64502809	1	144	8153	70	(marked for saving)
106	69116655	71987742	71999230	2	2	106	0.3	(marked for saving)
91	114957308	115682152	116223357	2	10	363	16.3	(marked for saving)
76	25757452	27100689	27249553	1	16	903	4.4	(marked for saving)
72	76114344	76118007	76118150	1	1	72	0	(marked for saving)
62	136446665	138961871	139062749	1	3	124	3	(marked for saving)
61	119771321	121729407	121730604	1	23	1218	0	(marked for saving)
54	20794552	23591266	23592144	1	2	85	0	(marked for saving)
52	102086854	102418900	102848562	1	13	470	12.9	(marked for saving)
41	1	1127371	1741853	1	3	91	18.5	(marked for saving)
chromosome 1:
541	32509850	32514581	35749453	5	69	5102	97.7	(marked for saving)
449	94711530	96917021	96917764	1	1	449	0	(marked for saving)
439	43031198	43089226	46273770	4	82	5857	96.2	(marked for saving)
428	108177532	108590561	110541732	2	15	928	58.9	(marked for saving)
425	6272652	6568399	8890207	2	15	1478	70.1	(marked for saving)
425	177079127	177350634	180293027	3	13	1255	88.9	(marked for saving)
405	19804826	19807195	23109611	4	43	2202	99.8	(marked for saving)
301	38994706	40695207	41822638	1	58	7134	34	(marked for saving)
299	23477372	23561055	26772439	2	36	2893	97	(marked for saving)
281	243813589	245217660	247109359	1	97	7479	57.1	(marked for saving)
268	46786459	46799743	50084692	2	31	3679	99.2	(marked for saving)
249	203299782	203915871	205468835	3	20	831	46.9	(marked for saving)
243	78879879	80731671	81337279	1	4	445	18.3	(marked for saving)
234	119013197	119966818	119967417	1	11	2207	0	(marked for saving)
233	15867592	16142123	17178462	3	31	1906	31.3	(marked for saving)
228	63825749	64287935	64416538	2	5	359	3.8	(marked for saving)
185	152760917	153254766	155756256	3	54	2100	75.6	(marked for saving)
181	173820156	176647392	176843926	2	2	181	5.9	(marked for saving)
166	223912360	225900868	225961023	1	22	2228	1.8	(marked for saving)
139	183563983	184814047	186303278	1	7	676	45	(marked for saving)
136	159990208	160239846	161016657	2	12	446	23.4	(marked for saving)
130	26785972	26905563	27814901	3	10	369	27.4	(marked for saving)
120	190015753	191229275	191230421	1	16	1320	0	(marked for saving)
101	195375685	195395562	198644802	1	41	2370	98.2	(marked for saving)
89	217576391	218506684	218507492	1	2	127	0	(marked for saving)
80	239082291	242284834	242285193	1	7	519	0	(marked for saving)
72	171206362	172121496	172121750	1	10	671	0	(marked for saving)
70	91502188	92441555	92716946	1	27	1612	8.3	(marked for saving)
66	163695840	165085029	165085868	1	1	66	0	(marked for saving)
63	113636722	114285072	114300921	1	3	120	0.4	(marked for saving)
61	35868079	38078190	38078414	1	2	119	0	(marked for saving)
61	233904332	234223587	234223784	1	1	61	0	(marked for saving)
58	86092627	86642461	87394379	1	8	237	22.7	(marked for saving)
57	149816263	150324874	150550532	1	2	88	6.8	(marked for saving)
56	3179111	3311149	3325169	1	15	662	0.4	(marked for saving)
53	206393323	207469007	207849910	1	8	266	11.5	(marked for saving)
52	51120725	52844950	52846655	1	2	83	0	(marked for saving)
50	54578212	56912656	56934406	1	4	153	0.6	(marked for saving)
24	29085449	31928140	32225720	1	2	47	8.9	(marked for saving)
chromosome 3:
994	42867081	42924506	46160173	6	188	22536	97.7	(marked for saving)
691	48078126	48267649	50799590	6	58	4594	76.5	(marked for saving)
358	124556415	124828322	127676876	3	58	2578	86	(marked for saving)
357	133440006	133445060	136705566	3	22	978	98.5	(marked for saving)
270	140272265	140283192	143157036	3	18	1360	86.8	(marked for saving)
269	39525395	40498391	42680887	1	100	8749	65.9	(marked for saving)
242	114928389	115437450	115551922	1	26	2498	3.4	(marked for saving)
233	182953205	183811162	185781603	3	14	603	59.5	(marked for saving)
229	194103187	194356493	197401522	3	16	856	92	(marked for saving)
222	29070219	31810987	32007567	1	43	3698	5.9	(marked for saving)
194	51353640	52741639	52743073	1	12	1168	0	(marked for saving)
177	86507515	86948541	89582166	3	18	884	79.6	(marked for saving)
119	9168990	9201890	11552605	2	41	1598	71	(marked for saving)
100	75605678	75870492	75873294	1	6	468	0	(marked for saving)
99	97839470	98400114	98937608	2	8	317	16.2	(marked for saving)
96	178900170	180534056	180534892	1	2	181	0	(marked for saving)
93	34678296	36220444	36911930	1	7	283	20.9	(marked for saving)
90	128493649	129950238	130050941	1	2	147	3	(marked for saving)
84	60055258	62330843	62332382	1	17	981	0	(marked for saving)
78	168775854	170295577	170984137	1	71	3520	20.8	(marked for saving)
76	102190279	102558830	102866191	1	61	2911	9.2	(marked for saving)
66	11733155	14460267	14590544	1	15	594	3.9	(marked for saving)
63	145797627	148591548	148613179	1	28	1519	0.6	(marked for saving)
56	186973154	188925402	188927411	1	28	1356	0	(marked for saving)
54	20054284	21422182	21422799	1	1	54	0	(marked for saving)
23	121231272	124300075	124300161	1	1	23	0	(marked for saving)
chromosome 19:
771	6435228	6468134	9696199	4	95	16475	97.5	(marked for saving)
616	53665493	53672057	56844672	4	34	6092	95.8	(marked for saving)
580	1207640	1218742	4506224	7	71	3700	99.3	(marked for saving)
563	17800269	17802342	21092813	3	16	2519	99.4	(marked for saving)
510	60381951	60684478	63675207	2	222	47717	90.3	(marked for saving)
489	49016910	49068559	52293973	3	121	26475	97.4	(marked for saving)
481	42300452	42335024	45587649	2	47	10899	98.3	(marked for saving)
478	56990636	57016857	60283980	3	123	23395	98.7	(marked for saving)
457	38958766	39725548	41933283	1	55	16552	66.7	(marked for saving)
423	14491669	14689989	17798728	3	9	1504	93.9	(marked for saving)
418	21406643	21782306	22951726	1	22	7193	35.3	(marked for saving)
264	45691767	45808014	47276965	2	8	445	44.3	(marked for saving)
260	10968010	11728820	12552934	1	49	9232	24.9	(marked for saving)
chromosome 5:
10116	148192195	148283996	151219639	30	615	44650	88.7	(marked for saving)
584	175322715	175458611	178439698	4	146	12633	90.1	(marked for saving)
549	76825693	76913957	79832971	2	21	1601	88.2	(marked for saving)
354	135520257	136342879	138308522	3	20	1357	59.4	(marked for saving)
344	162750035	163214724	165975201	2	25	1472	83.4	(marked for saving)
323	114957308	115660736	117143118	2	5	413	44.8	(marked for saving)
314	40034061	40623464	43316252	2	18	1623	81.3	(marked for saving)
293	71250702	71778845	74262144	2	37	2347	75	(marked for saving)
283	53731665	54188903	56755927	2	35	3072	77.5	(marked for saving)
211	139490577	140123897	142692994	2	61	2185	77.6	(marked for saving)
173	110689214	110740499	112798402	2	10	437	62.2	(marked for saving)
166	105411997	105907438	108551295	3	13	508	79.9	(marked for saving)
164	93037833	93860460	94532900	1	7	390	20.3	(marked for saving)
153	14508212	14557500	17648523	2	8	431	93.4	(marked for saving)
153	95800514	98196986	98197309	1	1	153	0	(marked for saving)
130	119771321	122543738	122954136	2	16	690	12.4	(marked for saving)
118	170938820	171614011	174089033	2	6	244	74.8	(marked for saving)
66	1	672515	1851774	1	38	1561	35.6	(marked for saving)
22	11166526	14300359	14300397	1	1	22	0	(marked for saving)

globally-best-60-regions:
=============================
chr	SumOfMaxScores	start	rstart	end	QN	totalHSPcount	totalscore	%ofRange
5	10116	148192195	148283996	151219639	30	615	44650	88.7	(saved)
4	1063	113766212	114061442	116595166	3	39	3065	76.5	(saved)
3	994	42867081	42924506	46160173	6	188	22536	97.7	(saved)
6	868	28040386	28164379	30975037	5	301	27415	84.9	(saved)
16	821	1488871	1695857	4742914	6	178	17709	92	(saved)
4	810	1	49320	2262042	6	212	7940	66.8	(saved)
19	771	6435228	6468134	9696199	4	95	16475	97.5	(saved)
3	691	48078126	48267649	50799590	6	58	4594	76.5	(saved)
16	688	29611971	29726172	32804166	5	240	21616	93	(saved)
8	640	142948064	144403479	146244745	3	284	32970	55.6	(saved)
4	633	118795284	119174260	121959118	5	109	4864	84.1	(saved)
10	628	73213626	74664257	75359239	4	41	2579	21	(saved)
7	618	98761711	98915217	102055140	6	91	11230	94.9	(saved)
19	616	53665493	53672057	56844672	4	34	6092	95.8	(saved)
X	609	133204237	134096743	136478899	3	102	7227	72	(saved)
c6_COX	600	28894961	29004804	32174996	4	187	6882	95.8	(saved)
c6_QBL	600	28983426	28999576	32280430	4	213	8556	99.1	(saved)
X	596	71416132	71438483	74721503	5	16	909	99.2	(saved)
5	584	175322715	175458611	178439698	4	146	12633	90.1	(saved)
19	580	1207640	1218742	4506224	7	71	3700	99.3	(saved)
17	573	46419659	46604965	49387723	2	61	6125	84.1	(saved)
15	565	82932485	82964890	86224663	3	44	4391	98.5	(saved)
19	563	17800269	17802342	21092813	3	16	2519	99.4	(saved)
10	557	100641920	100797386	103910686	5	30	1352	94.1	(saved)
5	549	76825693	76913957	79832971	2	21	1601	88.2	(saved)
17	545	13317116	13340269	16478789	2	57	8430	94.8	(saved)
1	541	32509850	32514581	35749453	5	69	5102	97.7	(saved)
6	531	85808542	86305591	89031958	4	17	1290	82.4	(saved)
9	529	92968111	93020028	96103449	4	62	6357	93.1	(saved)
10	520	35346699	35461750	38539252	3	140	9112	93	(saved)
7	517	54641530	54656910	57534719	5	105	5832	86.9	(saved)
15	515	86257628	86273420	89238348	3	89	5433	89.6	(saved)
X	514	46154971	46207124	49318996	2	176	15422	94	(saved)
19	510	60381951	60684478	63675207	2	222	47717	90.3	(saved)
17	501	3920692	4007841	7228842	3	140	13707	97.3	(saved)
12	498	16427200	16928142	19257951	2	36	2308	70.4	(saved)
15	489	95604423	96325924	98911970	4	24	1044	78.1	(saved)
19	489	49016910	49068559	52293973	3	121	26475	97.4	(saved)
8	488	123245351	123850715	126517787	2	12	2790	80.6	(saved)
7	488	106040631	106792367	107938653	2	30	1423	34.6	(saved)
12	484	63409320	63548003	66658353	3	7	594	94	(saved)
10	483	41533781	42150505	44819476	3	195	15095	80.6	(saved)
19	481	42300452	42335024	45587649	2	47	10899	98.3	(saved)
19	478	56990636	57016857	60283980	3	123	23395	98.7	(saved)
13	467	33986238	34817745	36577393	3	16	1037	53.1	(saved)
2	459	132359096	132561329	135455552	4	40	3064	87.4	(saved)
4	459	150938333	151362320	153911561	3	12	714	77	(saved)
19	457	38958766	39725548	41933283	1	55	16552	66.7	(saved)
1	449	94711530	96917021	96917764	1	1	449	0	(saved)
16	443	65377937	66203342	67156126	2	61	3943	28.7	(saved)
9	442	112455765	112484831	114852030	3	62	4809	71.5	(saved)
1	439	43031198	43089226	46273770	4	82	5857	96.2	(saved)
13	432	26872748	26896604	30178251	4	89	3246	99.1	(saved)
9	430	100958380	103201984	103211737	1	8	2340	0.2	(saved)
9	428	39219904	39436156	42468680	1	41	4493	91.6	(saved)
1	428	108177532	108590561	110541732	2	15	928	58.9	(saved)
1	425	6272652	6568399	8890207	2	15	1478	70.1	(saved)
1	425	177079127	177350634	180293027	3	13	1255	88.9	(saved)
19	423	14491669	14689989	17798728	3	9	1504	93.9	(saved)
2	422	94707228	94780234	97907543	3	112	6941	94.5	(saved)
19	418	21406643	21782306	22951726	1	22	7193	35.3
2	411	37220303	37334854	40010572	3	15	1111	80.8
X	411	149317119	151485376	152613538	3	31	2262	34
12	409	51415645	51565480	54715316	3	101	4668	95.2
15	405	32410163	33060888	35287771	3	22	1890	67.3
1	405	19804826	19807195	23109611	4	43	2202	99.8
7	403	147298873	148398520	150604708	2	107	13924	66.6
X	402	24136238	24138269	26641577	2	9	1161	75.6
6	399	42300452	42731304	45174977	4	30	1198	73.8
12	389	128985772	131629014	132289533	1	79	12567	19.9
16	389	25029560	25158716	28284040	3	16	1752	94.4
20	385	496291	592321	3715121	4	27	1420	94.3
6	380	33086001	33291438	36088126	3	56	2971	84.5
12	374	77024209	78946838	78947542	1	1	374	0
22	373	35937405	36072275	39056306	2	30	1303	90.1
16	369	17552124	17652143	20076973	2	7	521	73.2
9	363	14024915	15351436	15352134	1	1	363	0
3	358	124556415	124828322	127676876	3	58	2578	86
3	357	133440006	133445060	136705566	3	22	978	98.5
2	355	49197435	49388815	52158082	2	47	2351	83.7
16	355	71250702	73758157	73761799	1	5	1348	0.1
5	354	135520257	136342879	138308522	3	20	1357	59.4
22	348	21131420	21172263	24432437	3	67	2331	98.5
5	344	162750035	163214724	165975201	2	25	1472	83.4
8	340	54641530	55771518	57275282	4	28	1361	45.4
20	336	41638732	44012501	44566780	1	97	7532	16.7
18	332	20298262	20340993	23590626	3	82	5025	98.2
16	332	69215913	70039500	70453397	1	31	3187	12.5
16	327	53351176	53443123	56589457	2	27	2444	95
5	323	114957308	115660736	117143118	2	5	413	44.8
4	321	100597984	101130920	103602607	2	21	1565	74.7
6	320	24731786	26744719	27533170	1	80	9496	23.8
9	317	97699409	98196903	99001590	1	81	5372	24.3
13	316	101101189	104264679	104265418	1	2	355	0
16	316	85031021	87272348	88331815	1	29	2682	32
9	315	131562930	131612272	134856240	5	159	5451	98
7	314	141690796	141749601	144908590	3	33	1186	95.4
5	314	40034061	40623464	43316252	2	18	1623	81.3
2	306	176313847	176653777	179309113	4	49	1973	80.2
1	301	38994706	40695207	41822638	1	58	7134	34
1	299	23477372	23561055	26772439	2	36	2893	97
2	298	202269814	203613082	204639381	2	28	2303	31
22	296	17243815	17253428	20131020	3	67	2829	86.9
X	295	77024209	77905409	77906049	1	2	314	0
5	293	71250702	71778845	74262144	2	37	2347	75
9	287	3172707	3354332	6419716	4	21	948	92.6
21	285	17258473	19538868	19607298	1	2	305	2
16	283	8188786	8312965	11029119	2	9	485	82
5	283	53731665	54188903	56755927	2	35	3072	77.5
11	282	99638490	101660471	102725785	2	16	784	32.1
6	281	109630462	109755074	112756003	4	66	2766	90.7
1	281	243813589	245217660	247109359	1	97	7479	57.1
4	280	54360299	54465616	57491074	4	117	4865	91.4
7	280	4516240	5063437	7085569	1	98	12863	61.1
X	277	99638490	100494838	102230833	3	65	3867	52.4
X	274	83045861	83206635	86030508	3	10	790	85.3
4	274	22845884	23066912	25980393	2	26	2570	88
3	270	140272265	140283192	143157036	3	18	1360	86.8
3	269	39525395	40498391	42680887	1	100	8749	65.9
1	268	46786459	46799743	50084692	2	31	3679	99.2
2	266	109612471	110101678	112502594	4	35	1613	72.5
19	264	45691767	45808014	47276965	2	8	445	44.3
19	260	10968010	11728820	12552934	1	49	9232	24.9
20	259	23226373	23293969	26200799	1	72	5092	87.8
2	254	219143674	219211441	222114676	4	59	2890	87.7
9	254	69063476	69120108	72217874	2	46	2546	93.6
6	251	114477561	114485120	117747978	3	27	1082	98.6
8	250	86470262	87129957	88949954	2	8	648	55
9	249	77467320	77767051	78092817	1	4	421	9.8
1	249	203299782	203915871	205468835	3	20	831	46.9
11	245	120416498	123101924	123104195	1	7	1389	0
X	245	13085514	13306811	15484194	3	15	591	65.8
1	243	78879879	80731671	81337279	1	4	445	18.3
3	242	114928389	115437450	115551922	1	26	2498	3.4
18	239	29231482	29572507	31203596	2	81	6262	49.3
10	236	87473692	90368022	90368672	1	1	236	0
15	234	38580702	39055597	41818493	3	33	1778	83.5
17	234	71250702	71938097	71938801	1	1	234	0
1	234	119013197	119966818	119967417	1	11	2207	0
20	233	28602848	29396419	31842669	4	80	2949	73.9
1	233	15867592	16142123	17178462	3	31	1906	31.3
3	233	182953205	183811162	185781603	3	14	603	59.5
6	229	16592630	17014324	18190339	1	9	559	35.5
4	229	108488995	111540381	111559109	2	31	2807	0.5
3	229	194103187	194356493	197401522	3	16	856	92
1	228	63825749	64287935	64416538	2	5	359	3.8
8	227	7130034	7202632	10417002	2	25	2241	97.1
11	225	44186354	46549341	46683782	1	9	1447	4
4	224	8188786	8994505	11010580	2	22	1825	60.9
X	223	90936872	92715574	92716231	1	2	260	0
3	222	29070219	31810987	32007567	1	43	3698	5.9
13	221	75889657	76231644	76454052	1	3	415	6.7
11	221	95287681	95763456	97942749	2	26	2188	65.8
20	221	59008882	60455283	62316403	4	53	1682	56.2
13	216	86576435	88811635	89284296	2	7	543	14.2
6	212	149333662	149375040	151729167	3	13	532	71.1
5	211	139490577	140123897	142692994	2	61	2185	77.6
13	204	17393609	17939219	20455825	3	75	2619	76
8	201	10488263	10507330	12261587	3	44	2242	53
4	201	75121764	76339098	78223259	2	2	201	56.9
9	199	114904129	116498021	116498413	1	1	199	0
3	194	51353640	52741639	52743073	1	12	1168	0
11	193	62482912	62993424	65319310	2	61	3320	70.3
7	193	127893934	128523795	131001154	2	9	649	74.8
Y	191	330861	2906889	2908085	1	7	1023	0
7	191	17552124	17883505	20790937	3	14	627	87.8
7	190	72309454	72429607	75390593	3	9	421	89.4
8	188	71118358	71126878	74367591	2	23	1220	97.9
7	187	82169082	82422655	84783383	2	10	519	71.3
7	186	43094516	43413899	46151828	2	25	1212	82.7
X	185	50340350	51617000	53122539	2	47	2375	45.5
1	185	152760917	153254766	155756256	3	54	2100	75.6
8	183	91697850	92331149	94939351	2	23	1286	78.8
1	181	173820156	176647392	176843926	2	2	181	5.9
2	179	162219211	163129253	163718063	1	5	320	17.7
11	177	20513321	20582378	23772057	2	62	3450	96.4
10	177	111427956	112008282	112492393	1	5	394	14.6
3	177	86507515	86948541	89582166	3	18	884	79.6
4	175	127893934	128610491	129514257	2	6	267	27.3
5	173	110689214	110740499	112798402	2	10	437	62.2
14	172	64473048	64475986	67650716	2	26	1276	95.9
20	172	18164215	18214482	21441145	2	55	3144	97.5
16	172	33086001	33100072	34539914	2	44	2808	43.5
12	171	74708189	75639509	75640197	1	2	300	0
10	169	123074228	123233220	126302105	3	26	872	92.7
7	169	32771684	34716909	34717613	1	4	299	0
15	168	17389119	18579954	19371691	2	7	303	23.9
1	166	223912360	225900868	225961023	1	22	2228	1.8
5	166	105411997	105907438	108551295	3	13	508	79.9
5	164	93037833	93860460	94532900	1	7	390	20.3
17	163	9942344	11715441	11955522	1	15	1647	7.2
14	159	49088058	49807690	51854102	2	42	1932	61.8
11	158	6799174	6920896	9486968	1	57	4086	77.5
12	158	55634110	55682857	56930204	2	67	2711	37.7
17	158	40000975	40029226	43280062	2	10	657	98.2
12	155	66999151	67168272	67366352	2	6	297	5.9
X	155	113005234	114204716	116024463	2	35	1570	55
17	154	612092	1907944	3802569	3	13	787	57.2
5	153	14508212	14557500	17648523	2	8	431	93.4
5	153	95800514	98196986	98197309	1	1	153	0
NT_113890	152	1	13779	113246	1	30	2706	3
11	152	77024209	77773589	77774397	1	11	1330	0
17	152	16592630	16693506	18821869	1	36	2968	64.3
6	149	9942344	10178181	12239235	2	14	595	62.2
Y	148	22713540	22989292	26014098	1	224	12535	91.4
11	146	69215913	71204930	71973432	2	33	1891	23.2
10	146	28663327	28667618	31855820	1	77	3812	96.3
X	145	55700282	56327470	57952781	1	10	964	49.1
12	140	120416498	123062528	123062995	1	8	1022	0
12	139	44186354	46990455	47025527	1	30	1580	1
8	139	20794552	22603970	23673782	2	13	900	32.3
2	139	10023611	10106068	13252143	2	8	368	95
1	139	183563983	184814047	186303278	1	7	676	45
17	138	43293032	43357726	45994398	2	65	2844	79.6
4	138	3556746	3852164	4915690	2	43	1699	32.1
7	137	48636421	50417731	51295355	2	14	760	26.5
1	136	159990208	160239846	161016657	2	12	446	23.4
14	135	17887960	18152438	21063611	2	78	3067	87.9
X	130	146091234	147353894	147354637	1	1	130	0
1	130	26785972	26905563	27814901	3	10	369	27.4
5	130	119771321	122543738	122954136	2	16	690	12.4
22	129	46111350	46143289	49413022	2	40	1092	98.8
4	129	80365895	81526750	82275476	2	13	683	22.6
18	128	4516240	5280959	5281393	1	10	1188	0
11	126	397033	418501	3349512	2	32	1265	88.5
X	126	18495075	20084148	21785633	2	14	774	51.4
6	126	3953778	3976796	7193972	2	20	996	97.2
13	125	96981982	98400012	99987990	2	42	1983	47.9
17	125	36593117	39074813	39798645	2	8	327	21.8
17	125	26137941	26147414	29389694	2	3	147	97.9
10	125	128682305	131970635	131974864	1	30	2156	0.1
15	124	71997562	72868899	74340980	2	8	349	44.4
7	124	61936993	62184857	64502809	1	144	8153	70
22	122	12611775	14744883	15810100	2	46	1478	32.1
9	122	128254330	128635633	131552337	2	40	2710	88.1
Y	120	6005110	6871958	9221813	1	171	8819	71
1	120	190015753	191229275	191230421	1	16	1320	0
18	119	43756236	43810070	46506415	2	19	913	81.4
20	119	51498360	51627114	54390036	2	19	722	83.5
9	119	84547724	85871096	87334602	2	21	686	44.2
4	119	87611729	90253155	90254309	1	2	145	0
3	119	9168990	9201890	11552605	2	41	1598	71
5	118	170938820	171614011	174089033	2	6	244	74.8
17	117	32771684	33737971	35588028	2	41	1507	55.9
2	117	44780454	47220129	47220341	1	1	117	0
15	115	76149855	77671659	77748213	1	2	135	2.3
12	115	40034061	42688714	42689361	1	12	981	0
2	114	235736303	236232002	239031035	2	10	380	84.6
10	114	94421752	94965466	96126546	1	26	1302	35
12	112	110755386	110792368	113852123	2	5	203	92.4
8	111	36593117	37944337	39054934	2	30	935	33.5
16	110	47147551	47310316	49732289	1	37	2286	73.2
9	110	89543710	91396275	92690731	2	12	400	39.1
21	108	23098152	23384233	24878018	1	41	1781	45.1
15	107	61972504	62004059	62821805	2	15	559	24.7
8	106	133138065	135646758	135684348	1	14	842	1.1
20	106	47114465	48033932	50210345	1	85	5366	65.7
2	106	27062901	27454060	27455258	1	22	1782	0
7	106	69116655	71987742	71999230	2	2	106	0.3
11	105	40034061	40423295	40425267	1	16	1022	0
13	104	110811930	112156820	114109057	2	10	334	59
20	103	32771684	33663074	35750625	2	17	564	63
17	101	75270651	77513391	78565139	1	14	616	31.7
1	101	195375685	195395562	198644802	1	41	2370	98.2
NT_113906	100	1	5042	5446	1	8	735	0
3	100	75605678	75870492	75873294	1	6	468	0
4	99	65377937	65884289	66517253	2	8	304	19.1
3	99	97839470	98400114	98937608	2	8	317	16.2
18	98	1	257409	1527352	2	15	487	38.3
6	98	93037833	93836898	94595751	2	10	361	22.9
X	97	120350326	123134532	123135963	1	19	1187	0
3	96	178900170	180534056	180534892	1	2	181	0
12	95	5856223	6648437	8271704	1	73	3595	49
10	94	79152563	79162981	82049227	1	40	2447	87.2
4	94	46419659	47768291	47842378	2	22	752	2.2
3	93	34678296	36220444	36911930	1	7	283	20.9
2	91	215851617	218333518	218334256	1	4	182	0
7	91	114957308	115682152	116223357	2	10	363	16.3
3	90	128493649	129950238	130050941	1	2	147	3
4	89	173023238	175697055	175697793	1	10	733	0
1	89	217576391	218506684	218507492	1	2	127	0
11	88	126305806	128670390	129613630	1	69	3730	28.5
2	88	103342674	103510573	106191991	1	56	2907	81
2	86	210375884	210382037	213622862	1	16	1069	97.9
6	86	163477927	165672733	166782303	2	18	571	33.5
18	85	13085514	14095699	15263240	1	68	2969	35.2
8	85	40034061	42699991	42812489	1	2	111	3.4
9	85	123407231	124712937	124721461	1	14	1089	0.2
2	84	127892486	128314652	131159250	2	5	256	85.9
3	84	60055258	62330843	62332382	1	17	981	0
21	82	12775320	13304486	14639510	1	61	2176	40.3
10	82	62262160	64243117	64243416	1	11	822	0
16	82	20794552	22102407	22834345	1	9	272	22.1
NT_113929	81	16544	59753	105452	1	10	607	1.3
14	81	60883217	63617175	64060087	1	6	295	13.3
9	81	42908993	43013223	46192802	1	26	1341	96.1
11	80	112045740	113532210	113626433	1	50	2290	2.8
X	80	125925317	127059936	128838843	1	23	904	53.7
1	80	239082291	242284834	242285193	1	7	519	0
18	79	71548476	72212336	74856453	1	197	9229	79.9
4	79	185860606	188876567	189161873	1	8	538	8.6
2	78	70670249	73372159	73372476	1	10	715	0
2	78	170689227	171281771	171282157	1	9	649	0
2	78	86088325	87300232	87735936	1	3	155	13.1
9	78	34207375	35136964	37430772	1	35	1431	69.3
6	78	142716462	143127606	145853571	1	37	1752	82.3
4	78	161228079	161751068	162329593	1	5	189	17.4
3	78	168775854	170295577	170984137	1	71	3520	20.8
7	76	25757452	27100689	27249553	1	16	903	4.4
3	76	102190279	102558830	102866191	1	61	2911	9.2
14	75	101115793	104133725	104408295	1	14	745	8.2
11	75	10223575	10988198	11331134	1	4	152	10.3
4	75	36593117	38372835	39448485	1	11	693	32.5
21	74	25000597	26893000	27889302	1	8	215	30.1
14	74	83133552	83341576	83366709	1	20	1107	0.7
2	74	172475871	174909957	174910397	1	6	411	0
17	73	51978107	53415019	53415585	1	12	593	0
17	73	7328550	7532809	8050930	2	6	200	15.6
2	72	80397533	83299552	83299740	1	1	72	0
7	72	76114344	76118007	76118150	1	1	72	0
1	72	171206362	172121496	172121750	1	10	671	0
14	71	27731045	29085853	29138085	1	4	154	1.5
9	71	65787962	66098417	68775619	1	38	1635	80.9
4	71	83045861	85384123	85384931	1	8	454	0
22	70	28112566	28655867	30330856	1	20	688	50.6
18	70	7328550	9775109	9777805	1	37	1975	0
4	70	146091234	146901759	147032997	1	31	1133	3.9
1	70	91502188	92441555	92716946	1	27	1612	8.3
15	68	56083196	56687113	56812640	1	30	1313	3.7
17	68	55634110	58519260	58520011	1	8	335	0
6	68	106040631	106660852	106661718	1	19	1107	0
NT_113886	67	16544	40249	68146	1	7	203	0.8
14	67	89055946	89569254	90887352	1	9	253	39.8
18	67	47147551	49922616	49922780	1	1	67	0
X	67	32771684	34696282	34696743	1	5	297	0
6	67	99638490	100168952	100169221	1	5	314	0
21	66	31584711	32168057	32617288	1	9	245	13.5
14	66	97757564	98710289	100237045	1	37	1753	46.1
12	66	83145119	83611878	83937236	1	13	531	9.8
2	66	155817070	157775411	157776116	1	2	95	0
6	66	156744926	159110830	159575140	1	3	116	14
1	66	163695840	165085029	165085868	1	1	66	0
3	66	11733155	14460267	14590544	1	15	594	3.9
5	66	1	672515	1851774	1	38	1561	35.6
X	65	40034061	41086754	41597426	1	10	340	15.4
13	64	70877128	72833781	72880457	1	2	86	1.4
2	64	58147198	60541079	60542428	1	21	1140	0
12	63	1	171917	543608	1	24	1098	11.2
1	63	113636722	114285072	114300921	1	3	120	0.4
3	63	145797627	148591548	148613179	1	28	1519	0.6
c6_COX	62	25536732	28712775	28835777	3	4	81	3.7
2	62	142979702	144863902	144875395	1	27	1152	0.3
7	62	136446665	138961871	139062749	1	3	124	3
17	61	22730083	25118277	25902817	1	13	549	23.7
4	61	106040631	106785825	106818528	1	6	275	0.9
7	61	119771321	121729407	121730604	1	23	1218	0
1	61	35868079	38078190	38078414	1	2	119	0
1	61	233904332	234223587	234223784	1	1	61	0
21	60	40253243	42103594	43561069	1	88	2794	44
15	60	27199118	29407074	30424537	1	34	1256	30.7
12	60	106040631	106652228	107153921	1	31	1472	15.1
17	60	20794552	21782338	21783153	1	2	91	0
X	60	116727409	119272703	119273065	1	2	116	0
8	58	99638490	100030855	100040977	1	31	1392	0.3
8	58	47147551	49993841	49995437	1	14	683	0
8	58	1	182893	440162	1	15	582	7.7
2	58	79355324	79627726	79628764	1	9	402	0
9	58	108253843	109287859	109289226	1	12	563	0
1	58	86092627	86642461	87394379	1	8	237	22.7
12	57	35153876	36255653	36256458	1	2	95	0
20	57	54525729	55517023	55527873	1	58	2196	0.3
10	57	10796887	12748742	13827944	1	11	335	32.6
X	57	63227347	63281648	66512084	1	39	1588	97.6
1	57	149816263	150324874	150550532	1	2	88	6.8
14	56	32958633	36120155	36120550	1	1	56	0
11	56	32771684	33265101	33589815	1	4	135	9.8
18	56	68024817	69883407	71129332	1	48	1739	37.6
X	56	29909745	30750792	30751031	1	2	112	0
9	56	20675201	20728485	23946436	1	25	936	97.2
1	56	3179111	3311149	3325169	1	15	662	0.4
3	56	186973154	188925402	188927411	1	28	1356	0
11	55	80365895	82121260	82555375	1	2	97	13.1
8	55	126735924	127664209	127664394	1	1	55	0
14	54	70990990	73441317	73457596	1	17	663	0.4
2	54	18592885	19415451	19416540	1	15	663	0
7	54	20794552	23591266	23592144	1	2	85	0
3	54	20054284	21422182	21422799	1	1	54	0
Y	53	18031871	20622456	20929768	1	20	691	9.2
2	53	119091610	121452474	121456938	1	15	621	0.1
1	53	206393323	207469007	207849910	1	8	266	11.5
7	52	102086854	102418900	102848562	1	13	470	12.9
1	52	51120725	52844950	52846655	1	2	83	0
8	51	140565872	141814513	142138116	1	6	195	9.7
1	50	54578212	56912656	56934406	1	4	153	0.6
X	49	1207640	2748242	3583437	1	7	205	25.2
6	48	612092	2711006	3696619	1	4	146	29.7
20	46	14673642	17953391	17970334	1	16	619	0.5
8	44	25757452	26607244	27824568	1	8	240	36.7
2	42	194329174	196712591	196729640	1	4	138	0.5
7	41	1	1127371	1741853	1	3	91	18.5
11	39	65377937	66827721	67796446	1	6	201	29.2
NT_113880	37	16544	32938	160654	1	7	205	3.8
10	37	104016692	104155298	104155630	1	1	37	0
10	26	32120814	35042976	35043116	1	1	26	0
6	26	117753075	117815748	117936655	1	2	49	3.6
10	24	119897972	122781718	122781816	1	1	24	0
1	24	29085449	31928140	32225720	1	2	47	8.9
13	23	30181348	30545481	30848216	1	4	86	9.1
14	23	68079422	68204405	68204479	1	1	23	0
22	23	24555821	24571958	24962969	1	2	46	11.8
12	23	48173217	51197295	51411055	1	2	44	6.4
3	23	121231272	124300075	124300161	1	1	23	0
18	22	23689577	23729804	24189420	1	2	44	13.8
X	22	68057903	71266705	71326700	1	2	44	1.8
5	22	11166526	14300359	14300397	1	1	22	0
8	21	74393872	74830042	74830158	1	1	21	0
22	19	42753121	46024316	46024444	1	1	19	0
global files summary:
Homo_sapiens.glob01.5.minQN1.fac2.01.blastresult
Homo_sapiens.glob02.4.minQN1.fac2.01.blastresult
Homo_sapiens.glob03.3.minQN1.fac2.01.blastresult
Homo_sapiens.glob04.6.minQN1.fac2.01.blastresult
Homo_sapiens.glob05.16.minQN1.fac2.01.blastresult
Homo_sapiens.glob06.4.minQN1.fac2.02.blastresult
Homo_sapiens.glob07.19.minQN1.fac2.01.blastresult
Homo_sapiens.glob08.3.minQN1.fac2.02.blastresult
Homo_sapiens.glob09.16.minQN1.fac2.02.blastresult
Homo_sapiens.glob10.8.minQN1.fac2.01.blastresult
Homo_sapiens.glob11.4.minQN1.fac2.03.blastresult
Homo_sapiens.glob12.10.minQN1.fac2.01.blastresult
Homo_sapiens.glob13.7.minQN1.fac2.01.blastresult
Homo_sapiens.glob14.19.minQN1.fac2.02.blastresult
Homo_sapiens.glob15.X.minQN1.fac2.01.blastresult
Homo_sapiens.glob16.c6_COX.minQN1.fac2.01.blastresult
Homo_sapiens.glob17.c6_QBL.minQN1.fac2.01.blastresult
Homo_sapiens.glob18.X.minQN1.fac2.02.blastresult
Homo_sapiens.glob19.5.minQN1.fac2.02.blastresult
Homo_sapiens.glob20.19.minQN1.fac2.03.blastresult
Homo_sapiens.glob21.17.minQN1.fac2.01.blastresult
Homo_sapiens.glob22.15.minQN1.fac2.01.blastresult
Homo_sapiens.glob23.19.minQN1.fac2.04.blastresult
Homo_sapiens.glob24.10.minQN1.fac2.02.blastresult
Homo_sapiens.glob25.5.minQN1.fac2.03.blastresult
Homo_sapiens.glob26.17.minQN1.fac2.02.blastresult
Homo_sapiens.glob27.1.minQN1.fac2.01.blastresult
Homo_sapiens.glob28.6.minQN1.fac2.02.blastresult
Homo_sapiens.glob29.9.minQN1.fac2.01.blastresult
Homo_sapiens.glob30.10.minQN1.fac2.03.blastresult
Homo_sapiens.glob31.7.minQN1.fac2.02.blastresult
Homo_sapiens.glob32.15.minQN1.fac2.02.blastresult
Homo_sapiens.glob33.X.minQN1.fac2.03.blastresult
Homo_sapiens.glob34.19.minQN1.fac2.05.blastresult
Homo_sapiens.glob35.17.minQN1.fac2.03.blastresult
Homo_sapiens.glob36.12.minQN1.fac2.01.blastresult
Homo_sapiens.glob37.15.minQN1.fac2.03.blastresult
Homo_sapiens.glob38.19.minQN1.fac2.06.blastresult
Homo_sapiens.glob39.8.minQN1.fac2.02.blastresult
Homo_sapiens.glob40.7.minQN1.fac2.03.blastresult
Homo_sapiens.glob41.12.minQN1.fac2.02.blastresult
Homo_sapiens.glob42.10.minQN1.fac2.04.blastresult
Homo_sapiens.glob43.19.minQN1.fac2.07.blastresult
Homo_sapiens.glob44.19.minQN1.fac2.08.blastresult
Homo_sapiens.glob45.13.minQN1.fac2.01.blastresult
Homo_sapiens.glob46.2.minQN1.fac2.01.blastresult
Homo_sapiens.glob47.4.minQN1.fac2.04.blastresult
Homo_sapiens.glob48.19.minQN1.fac2.09.blastresult
Homo_sapiens.glob49.1.minQN1.fac2.02.blastresult
Homo_sapiens.glob50.16.minQN1.fac2.03.blastresult
Homo_sapiens.glob51.9.minQN1.fac2.02.blastresult
Homo_sapiens.glob52.1.minQN1.fac2.03.blastresult
Homo_sapiens.glob53.13.minQN1.fac2.02.blastresult
Homo_sapiens.glob54.9.minQN1.fac2.03.blastresult
Homo_sapiens.glob55.9.minQN1.fac2.04.blastresult
Homo_sapiens.glob56.1.minQN1.fac2.04.blastresult
Homo_sapiens.glob57.1.minQN1.fac2.05.blastresult
Homo_sapiens.glob58.1.minQN1.fac2.06.blastresult
Homo_sapiens.glob59.19.minQN1.fac2.10.blastresult
Homo_sapiens.glob60.2.minQN1.fac2.02.blastresult

# Done!