>creating p-loci data structure...done
 -> selfscore (ENSP00000313079) successfully validated...
 -> selfscore (ENSP00000371000) successfully validated...
 -> selfscore (ENSP00000370938) successfully validated...
 -> selfscore (ENSP00000370877) successfully validated...
 -> selfscore (ENSP00000370844) successfully validated...
 -> selfscore (ENSP00000258451) successfully validated...
 -> selfscore (ENSP00000346027) successfully validated...
 -> selfscore (ENSP00000241463) successfully validated...
 -> selfscore (ENSP00000370532) successfully validated...
 -> selfscore (ENSP00000370512) successfully validated...
 -> selfscore (ENSP00000370491) successfully validated...
 -> selfscore (ENSP00000302478) successfully validated...
 -> selfscore (ENSP00000304331) successfully validated...
 -> selfscore (ENSP00000370421) successfully validated...
 -> selfscore (ENSP00000370414) successfully validated...
 -> selfscore (ENSP00000370408) successfully validated...
 -> selfscore (ENSP00000333490) successfully validated...
 -> selfscore (ENSP00000370369) successfully validated...
 -> selfscore (ENSP00000370345) successfully validated...
 -> selfscore (ENSP00000282397) successfully validated...
 -> selfscore (ENSP00000370205) successfully validated...
 -> selfscore (ENSP00000370192) successfully validated...
 -> selfscore (ENSP00000255289) successfully validated...
 -> selfscore (ENSP00000321504) successfully validated...
 -> selfscore (ENSP00000370128) successfully validated...
 -> selfscore (ENSP00000370055) successfully validated...
 -> selfscore (ENSP00000370014) successfully validated...
>fetching global-besthit data for all queries against Danio_rerio...>warning: tblastn/allParahox.Danio_rerio.blastresult contains no data (at least for query "ENSP00000321504"! (getBestBlastHit)
>warning: tblastn/allParahox.Danio_rerio.blastresult contains no data (at least for query "ENSP00000370014"! (getBestBlastHit)
done
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000180730, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000127870, targetOrg=Danio_rerio)...none
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000132964, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000132970, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000132975, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000152484, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122026, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122035, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122034, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122033, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000139517, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000186184, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000169840, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000139515, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000180389, targetOrg=Danio_rerio)...none
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000165556, targetOrg=Danio_rerio)...none
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000183463, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122025, targetOrg=Danio_rerio)...none
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000152520, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000102755, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000132963, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000139508, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000132938, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000179141, targetOrg=Danio_rerio)...none
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000139514, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122042, targetOrg=Danio_rerio)...ok
>fetching EnsemblCompara-homologs for (GeneID=ENSG00000122043, targetOrg=Danio_rerio)...none
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...
 >recalculated the boundaries for current block, as changed
done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
Argument "NoData" isn't numeric in int at /scr/mojito/joe/src/perl/lib/perl5/5.8.8/SynBlast/MySyntenyAln.pm line 893.
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
Argument "NoData" isn't numeric in int at /scr/mojito/joe/src/perl/lib/perl5/5.8.8/SynBlast/MySyntenyAln.pm line 893.
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>chaining blast-hits together...done
>calculating gene order alignments...done
>"ENSG00000165556-homologs/unknownHits/Danio_rerio.ENSDARP00000096679.fa" did already exist, skip downloading...
>"ENSG00000165556-homologs/unknownHits/Danio_rerio.ENSDARP00000052708.fa" did already exist, skip downloading...