| Sequence ID | pao.2814 |
|---|---|
| Location | 5,325,957 – 5,326,017 |
| Length | 60 |
| Max. P | 0.863033 |
| Location | 5,325,957 – 5,326,017 |
|---|---|
| Length | 60 |
| Sequences | 6 |
| Columns | 61 |
| Reading direction | reverse |
| Mean pairwise identity | 77.25 |
| Mean single sequence MFE | -15.03 |
| Consensus MFE | -14.27 |
| Energy contribution | -13.47 |
| Covariance contribution | -0.80 |
| Combinations/Pair | 1.33 |
| Mean z-score | -1.29 |
| Structure conservation index | 0.95 |
| SVM decision value | 0.84 |
| SVM RNA-class probability | 0.863033 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>pao.2814 5325957 60 - 6264404 GACCGAUACGAGGGUGGCUGUCAGCAGGCACGGUCAUUCCUC-CUUUUAAAACACGGGAAG ..(((.((.(((((((.(((....))).)))((.....)).)-))).)).....))).... ( -15.50) >pss.2526 4969971 54 - 6093698 -------ACGAGGAUGGCUGUCAACAGGCACGGUCAUACCUCAUUUUUUUAAUACGAGGAU -------..((((((((((((........)))))))).))))................... ( -15.80) >ppk.2729 5354688 53 - 6181863 -------UCAAGGGUGGCUGUCAGUAGGCACGGUCACACCUU-UUUUAUUAAUACAGGGAU -------..((((((((((((........)))))))).))))-.................. ( -14.20) >psp.2435 4774472 53 - 5928787 -------ACGAGGAUGGCUGUCAACAGGCACGGUCAUACCUC-CUUUUUUAAUACGAGGAU -------..((((((((((((........)))))))).))))-.................. ( -14.90) >pf5.504 6097471 53 + 7074893 -------ACGAGGGUGGCUGUUAACAGGCACGGUCACUACUC-AUUUAUAGAUACAGGGAU -------..((((((((((((........))))))))).)))-.................. ( -14.80) >pfo.436 5520586 53 + 6438405 -------GCGAGUGUGGCUGUCAACAGGCACGGUCACUACUC-UUUUAUAGAUACAGGGAU -------..((((((((((((........)))))))).))))-.................. ( -15.00) >consensus _______ACGAGGGUGGCUGUCAACAGGCACGGUCACACCUC_UUUUAUAAAUACAGGGAU .........((((((((((((........)))))))).))))................... (-14.27 = -13.47 + -0.80)
Generated by rnazCluster.pl (part of RNAz 1.0) on Thu Jan 18 21:11:44 2007