| Sequence ID | pao.566 |
|---|---|
| Location | 995,973 – 996,037 |
| Length | 64 |
| Max. P | 0.908162 |
| Location | 995,973 – 996,037 |
|---|---|
| Length | 64 |
| Sequences | 6 |
| Columns | 67 |
| Reading direction | forward |
| Mean pairwise identity | 78.87 |
| Mean single sequence MFE | -22.58 |
| Consensus MFE | -15.66 |
| Energy contribution | -15.63 |
| Covariance contribution | -0.03 |
| Combinations/Pair | 1.18 |
| Mean z-score | -1.87 |
| Structure conservation index | 0.69 |
| SVM decision value | 1.06 |
| SVM RNA-class probability | 0.908162 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>pao.566 995973 64 + 6264404 UUUGACCAAUCACGUUU---CUGAUUGACCCCUUUGGCGUGCUCCGCUACUGGGGGUGGAGCGCGCU ......((((((.....---.))))))........(((((((((((((......))))))))))))) ( -28.70) >pel.2216 1733048 66 - 5888780 AUUCAUACAGAAAGAUCUGACCGAUUGAUUCUCCCGGCGUGCUCCGCUGCUGGGAGUGGAGUUCGC- .......((((....))))..(((......(((((((((.((...)))))))))))......))).- ( -21.80) >ppk.2577 1103042 66 - 6181863 AUUCAUACAGAAAGAUCUGACCGAUUGAUUCCCUCGGCGUGCUCCGCUGCUGGGAGUGGAGUUCGC- .......((((....))))..(((((.((((((.(((((.....)))))..)))))).))..))).- ( -20.50) >pfo.2514 1618655 66 - 6438405 UUUCACCAAUCAUGAAUUGACUGAUUGAUCCUUCCGGCGUGCCCCGCUGCUGGGAGUGGAGUUCGC- ((((((((((((.(......))))))).((((..(((((.....)))))..)))))))))).....- ( -20.30) >pst.1102 2016041 65 + 6397126 UUUCAACAAUCAUGAAUUAACUGAUUGAUC-UCCCGGCGUGCCCCGCUGCUGGGAGUGGAGCUCGC- (((((.((((((.(......)))))))..(-((((((((.((...)))))))))))))))).....- ( -21.70) >psp.2046 1883463 65 - 5928787 UUUCAACAAUCAUGAAUUAAUUGAUUGAUC-UCCCGGCGUGCUCCGCUGCUGGGAGUGGAGUUCGC- (((((.((((((.........))))))..(-((((((((.((...)))))))))))))))).....- ( -22.50) >consensus UUUCAACAAUCAUGAAUUGACUGAUUGAUCCUCCCGGCGUGCUCCGCUGCUGGGAGUGGAGUUCGC_ ....................................(((.((((((((......)))))))).))). (-15.66 = -15.63 + -0.03)
Generated by rnazCluster.pl (part of RNAz 1.0) on Thu Jan 18 21:11:43 2007