| Sequence ID | pao.167 |
|---|---|
| Location | 318,200 – 318,263 |
| Length | 63 |
| Max. P | 0.887187 |
| Location | 318,200 – 318,263 |
|---|---|
| Length | 63 |
| Sequences | 6 |
| Columns | 63 |
| Reading direction | reverse |
| Mean pairwise identity | 79.15 |
| Mean single sequence MFE | -8.04 |
| Consensus MFE | -5.92 |
| Energy contribution | -5.92 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.72 |
| Structure conservation index | 0.74 |
| SVM decision value | 0.95 |
| SVM RNA-class probability | 0.887187 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>pao.167 318200 63 - 6264404 UAUAAAGAUUCUUAAACAAUAUUUUUAAGAAUAUUGCCCACUGCUUACUAUGCGCCUCACGCC .......(((((((((.......)))))))))...................(((.....))). ( -7.50) >pel.3045 5601655 63 - 5888780 UAUAAACAUUCUUAAACAGUAUUUUUAAGAAUAUCCGCGCCUCACUAGUAUUGCGCUUACGCC .......(((((((((.......)))))))))....((((............))))....... ( -10.10) >pfo.99 6204279 63 + 6438405 UAUAAACAUUCUUAAAUAGUCUUUUUAAGAAUAUCCGCGCCUCUCUUAUAUUGCUCCCACGCC .......(((((((((.......)))))))))....(((....................))). ( -6.95) >pf5.110 6846607 63 + 7074893 UAUAAACAUUCUUAAAUAGUAUUUUUAAGAAUAUCCGGCCCUAUCUAGUAUUGCUCCCACGCC .......(((((((((.......)))))))))....(((.......((.....)).....))) ( -7.50) >pst.186 6062152 63 + 6397126 UAUCUGCAUUCUUAAAUAGUCUUUUUAAGAAUAUCCGCGCGUCACUAUUAUUGCCCUACCGCC .....(((((((((((.......)))))))))......(((..........)))......)). ( -8.30) >psp.53 98352 63 - 5928787 UAUCUGCAUUCUUAAAUAGUCUUUUUAAGAAUAUCCGCACCUCAUUAUUAUUGCCUCACCGCC .....(((((((((((.......)))))))))....(((............)))......)). ( -7.90) >consensus UAUAAACAUUCUUAAAUAGUAUUUUUAAGAAUAUCCGCGCCUCACUAGUAUUGCCCCCACGCC .......(((((((((.......)))))))))............................... ( -5.92 = -5.92 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Thu Jan 18 21:18:27 2007