| Sequence ID | pao.2466 |
|---|---|
| Location | 4,609,463 – 4,609,520 |
| Length | 57 |
| Max. P | 0.998631 |
| Location | 4,609,463 – 4,609,520 |
|---|---|
| Length | 57 |
| Sequences | 4 |
| Columns | 57 |
| Reading direction | reverse |
| Mean pairwise identity | 86.76 |
| Mean single sequence MFE | -17.02 |
| Consensus MFE | -15.77 |
| Energy contribution | -15.40 |
| Covariance contribution | -0.37 |
| Combinations/Pair | 1.20 |
| Mean z-score | -4.06 |
| Structure conservation index | 0.93 |
| SVM decision value | 3.17 |
| SVM RNA-class probability | 0.998631 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>pao.2466 4609463 57 - 6264404 CCUGGCGAAAACUCGUUAAUGUGUUAACGUUAUAUUUAACAUGUUAAUGAUCGUCAA ..((((((....(((((((((((((((........))))))))))))))))))))). ( -19.50) >pau.494 5619256 57 + 6537648 CCUGGCGAAAACUCGUUAAUGUGUUAACGUUAUAUUUAACAUGUUAAUGAUCGUCAA ..((((((....(((((((((((((((........))))))))))))))))))))). ( -19.50) >pf5.2020 3891532 55 - 7074893 CGGGUCGAUU--UCGUUAAUGUGUUAACGUUAUAUUUAAUAUGUUAACGAUCGUCAA ...(.(((..--(((((((((((((((........)))))))))))))))))).).. ( -16.10) >pel.1777 3304745 55 - 5888780 CGCGGUGUUU--UUGUUAAUGUGUUAACGUUAUAUUUAAUAUGUUAACGAUCGUCAA ...(..(...--(((((((((((((((........))))))))))))))).)..).. ( -13.00) >consensus CCUGGCGAAA__UCGUUAAUGUGUUAACGUUAUAUUUAACAUGUUAACGAUCGUCAA ...(((((....(((((((((((((((........)))))))))))))))))))).. (-15.77 = -15.40 + -0.37)
Generated by rnazCluster.pl (part of RNAz 1.0) on Thu Jan 18 21:16:53 2007