a score=0
s X_DroMel_CAF1 12191563 101 + 22224390 GGUUACAGUCUGGGCUUGUUGCACAUGGCGUAUACGCCAU-----GUCCGGCGAGGAUGCAAAG----UCAGUGGCCCAAGAUUGAAGCAGAUUGAAGGACGCAAACAAA
s DroSec_CAF1 17979 101 + 1 GGUUACAGUCUGGGCUUGUUGCACAUGGCGUAUACGCCAU-----GUCCGGCGUGGAUGCAAAG----UCAGUGGCCCAAGAUUGAAGCAGAUUGAAGGACGCAAACAAA
s DroSim_CAF1 19181 101 + 1 GGUUACAGUCUGGGCUUGUUGCACAUGGCGUAUACGCCAU-----GUCCGGCGUGGAUGCAAAG----UCAGUGGCCCAAGAUUGAAGCAGAUUGAAGGACGCAAACAAA
s DroYak_CAF1 2420 96 + 1 AG--------------UGUUGCACAUGGCGUAUACGCUAUUCGCAGUCCGGCGAGGAUGCAAAGUCAGGUGGUGGCCCAAGAUUGAAGCAGAUUGAAGGACGCAAACGAG