a score=0
s 3R_DroMel_CAF1 25598583 93 + 27905053 AGAGAGGAGUGGAUAGCGGGAGAGACAG--AGGCAGAGGCAGCGGAAUGGAGCGAGCGGUCGGUCUUUGCCGUCGCCAGUUGCCAGUUGUUCAGU
s DroSec_CAF1 25699 93 + 1 AGAGAGGAGCGGAUAGCGGGAGAGACAG--AGGCAGAGGCAGCGGAAUGGAGCGAGCGGUCGGUCUUUGCCGUCGCCAGUUGCCAGUUGUUCAGU
s DroSim_CAF1 26464 95 + 1 AGAGAGUAGCGGAUAGCGGGAGAGACAGAGAGGCAGAGGCAGCGGAAUGGAGCGAGCGGUCGGUCUUUGCCGUCGCCAGUUGCCAGUUGUUCAGU