a score=0
s 3R_DroMel_CAF1 2872587 120 + 27905053 UUUCCCCACUUGAUUUCGUGCGUAGUUAGUAAGGAAGUCGCGUUCAUUCGUUCGCAGCUCUAACGAGCCCCAGCGAAUAUUUAUGAUCAGCACGGGCUCAUGGGCCUCCUCCUAACCACC
s DroSec_CAF1 3785 119 + 1 UUUCCCCACUUGAUUUCGUGCGUAGUUAGUAAGGAAGUCGCGUUCAUUCGUUCGCAGCUCUAACGAGCCCCAGCGAAUAUUUAUGAUCAGCAUGGGCUCACCG-CCCACUCCUCUCCACC
s DroSim_CAF1 4167 116 + 1 UUUCCCCACUUGAUUUCGUGCGUAGUUAGUAAGGAAGUCGCGUUCAUUCGUUCGCAGCUCUAACGAGCCCCAGCGAAUAUUUAUGAUCAGCAUGGGCUCAC----CCACUCCUCACCACC
s DroEre_CAF1 4716 117 + 1 UUUCCCCACUUGAUUUCGUGCGUAGUUAGUAAGGAAGUCGCGUUCAUUCGUUCGCAGCUCUAACGAGCCCCAGCGAAUAUUUAUGAUCAGCCUGGGCUCACCG-CCC--CCUUUACCACC