| Sequence ID | 3R_DroMel_CAF1 |
|---|---|
| Location | 4,304,132 – 4,304,222 |
| Length | 90 |
| Max. P | 0.811174 |
| Location | 4,304,132 – 4,304,222 |
|---|---|
| Length | 90 |
| Sequences | 3 |
| Columns | 92 |
| Reading direction | reverse |
| Mean pairwise identity | 90.44 |
| Mean single sequence MFE | -21.00 |
| Consensus MFE | -21.00 |
| Energy contribution | -21.00 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.33 |
| Structure conservation index | 1.00 |
| SVM decision value | 0.65 |
| SVM RNA-class probability | 0.811174 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>3R_DroMel_CAF1 4304132 90 - 27905053 UCCUCGCUUUGCUUGGCUGGGCGUUGACAUGACGCCGCACAUAGCAGAGUUAUAAGCCACCCUUGCCCAUUCU--CCCCCUAUUCGAUUUUC .....((((((((((((..((((((.....)))))))).)).)))))))).......................--................. ( -21.00) >DroSec_CAF1 105307 88 - 1 UCCUCGCUUUGCUUGGCUGGGCGUUGACAUGACGCCGCACAUAGCAGAGUUAUAAGCCACCCUUUCCCAAUUC--CCCCC--UCCGAUUUUU .....((((((((((((..((((((.....)))))))).)).)))))))).......................--.....--.......... ( -21.00) >DroSim_CAF1 105893 90 - 1 UCCUCGCUUUGCUUGGCUGGGCGUUGACAUGACGCCGCACAUAGCAGAGUUAUAAGCCACCAUUUCCCCUUUCUCCCCCU--UCCGAUUUUC .....((((((((((((..((((((.....)))))))).)).))))))))..............................--.......... ( -21.00) >consensus UCCUCGCUUUGCUUGGCUGGGCGUUGACAUGACGCCGCACAUAGCAGAGUUAUAAGCCACCCUUUCCCAUUUC__CCCCC__UCCGAUUUUC .....((((((((((((..((((((.....)))))))).)).)))))))).......................................... (-21.00 = -21.00 + 0.00)
Generated by rnazCluster.pl (part of RNAz 1.0) on Mon Dec 4 10:11:55 2006