a score=0
s 3L_DroMel_CAF1 1352653 90 + 23771897 CGAGCUACCUUCUUCAUAUUAACUAUCUAGUAAUGUGGAAGAAACUUUAAUCUU------------------------AGUUUUAGUUAUUUUAUAGUAACUAGCUUGCAUUUA
s DroSec_CAF1 8149 110 + 1 CAAGCUACCUUCUUCAUAUUAACUAUCCAGUAAUUUGGAUGAAACUCCCAUCUUAAAGUAAUUAGUUUUAGUUAGUAUAAUUUUAGUUAUAUCAUAGUAACUAG----CACCUA
s DroSim_CAF1 6101 110 + 1 CAAGCUACCUUCUUCAUAUUAACUAUCUAGUAAUUAGGAAGAAACUCCCAUCUUAAAGUAAUUAGUUAUAGUUAUUAUAAUUUUAGUUAUAUCAUAGUAACUAG----CACUUA