a score=0
s 3L_DroMel_CAF1 9496756 94 + 23771897 AGUGGAUGGAAAAGCGUGUGGGUUUUAGGUGCGUGUGCGCAGCGGAGUGUGU--GAGACACAAAGCUGAAGAAAAACCAAAAAUAGAAAAA-------AUCUA
s DroSim_CAF1 14303 100 + 1 AGUGGAUGGAAAAGCGUGUGGGU-UUAGGUGCGUGUGCGCAGCGGAGUGUGU--GAGACACAAAGCUGAAGAAAAACCAAAAAAAAAAAAACAAACACAUUGA
s DroYak_CAF1 15194 94 + 1 AGUGGAUGGAAAAGCGUGUGGGU-CUAGGUGCGUGUGCGCAGCCGAGUGUGGAUGGGAUACAAAGCAGAAGAAAAACAAAAAAG-GAAA-------ACAUUGC