BLASTP 2.2.27+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Tribolium_castaneum.Tcas3.24_edited.pep.all.fa 16,526 sequences; 7,424,042 total letters Query= EHJ69324 pep:known supercontig:DanPle_1.0:JH386160:331454:341674:-1 gene:KGM_10878 transcript:EHJ69324 description:"Clock " Length=600 Score E Sequences producing significant alignments: (Bits) Value TC000088-PA pep:known scaffold:Tcas3:ChLG3:13496037:13503487:1 ... 482 4e-163 TC004710-PA pep:novel scaffold:Tcas3:ChLGX:1311403:1330465:1 ge... 131 2e-32 TC011105-PA pep:known scaffold:Tcas3:ChLG10:7007258:7048781:-1 ... 127 3e-31 TC003908-PA pep:known scaffold:Tcas3:ChLG3:31949876:32002849:1 ... 123 9e-30 TC013241-PA pep:known scaffold:Tcas3:ChLG5:14849142:14868043:-1... 117 1e-27 TC002494-PA pep:novel scaffold:Tcas3:ChLG3:32097897:32110198:-1... 95.5 6e-21 TC014256-PA pep:novel scaffold:Tcas3:ChLG5:9916602:9933754:1 ge... 86.7 1e-17 TC016205-PA pep:known scaffold:Tcas3:ChLG10:9299772:9303072:-1 ... 79.7 2e-16 TC001448-PA pep:novel scaffold:Tcas3:Unknown:5129126:5136919:-1... 79.3 1e-15 TC013566-PA pep:novel scaffold:Tcas3:ChLGX:4613107:4632677:-1 g... 73.9 4e-14 TC012997-PA pep:novel scaffold:Tcas3:ChLG5:19086200:19091419:-1... 65.1 5e-11 TC016204-PA pep:novel scaffold:Tcas3:ChLG10:9309032:9337681:-1 ... 41.6 7e-04 TC001593-PA pep:novel scaffold:Tcas3:Unknown:29801960:29805157:... 38.9 0.004 TC014225-PA pep:known scaffold:Tcas3:ChLGX:4462545:4473486:1 ge... 38.5 0.007 TC007163-PA pep:known scaffold:Tcas3:ChLG4:9367025:9374489:-1 g... 35.8 0.058 TC012851-PA pep:known scaffold:Tcas3:ChLG9:21038364:21039704:1 ... 32.7 0.26 TC010848-PA pep:novel scaffold:Tcas3:ChLGX:6922287:6926338:1 ge... 32.0 0.71 TC012353-PA pep:known scaffold:Tcas3:ChLG9:8235609:8243887:1 ge... 30.4 2.4 TC007370-PA pep:known scaffold:Tcas3:ChLG4:6329965:6356132:-1 g... 30.0 2.8 TC006161-PA pep:known scaffold:Tcas3:ChLG8:4098560:4102590:1 ge... 28.9 5.9 TC030636-PA pep:novel scaffold:Tcas3:ChLG7:15441513:15442895:1 ... 28.9 6.3 > TC000088-PA pep:known scaffold:Tcas3:ChLG3:13496037:13503487:1 gene:TC000088 transcript:TC000088-RA description:"CLOCK\x3b Clock " Length=581 Score = 482 bits (1240), Expect = 4e-163, Method: Compositional matrix adjust. Identities = 220/342 (64%), Positives = 280/342 (82%), Gaps = 10/342 (3%) Query 17 NLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITVRSRAHDVQED 76 NLSEKKRRDQFN+LVNEL SMV+T +RKMDKSTVLKSTI+FLKNHNEI VRSR +++QED Sbjct 16 NLSEKKRRDQFNLLVNELSSMVATGSRKMDKSTVLKSTIAFLKNHNEIAVRSRVNEIQED 75 Query 77 WKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLAF 136 WKP FL+NEEFT+L+LEA++GF+MVFSASG I+Y SES+TSLLGH P ++N +I+++A Sbjct 76 WKPTFLTNEEFTHLILEAVDGFIMVFSASGQIFYASESITSLLGHLPNQVLNMTIYEMAN 135 Query 137 VDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQRGTLDFRDEVTYELVQFDGHFR-- 194 ++ +LYNIL L P++ +SF C L+RG D + ++ELV F G+FR Sbjct 136 EEEHSHLYNIL-----LTPSE---DQGQVSFSCHLRRGDPDSKQNPSFELVHFVGYFRSD 187 Query 195 KNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLF 254 +++ +EN + Y E ++RL+FV TG++ P+L+R++ LVD+ +SEFTSRHSLEWKFLF Sbjct 188 EDMVQSENRYSGYSGEADTRLVFVGTGKIKTPRLIREMPLVDSSKSEFTSRHSLEWKFLF 247 Query 255 LDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQW 314 LDHRAPPIIGYLPFE+LGTSGYDYYH DDL+ ++ H+ALMQKGE TSC+YRFLTKGQQW Sbjct 248 LDHRAPPIIGYLPFELLGTSGYDYYHVDDLDNIIIGHKALMQKGEGTSCFYRFLTKGQQW 307 Query 315 IWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERT 356 IWLQTR+YITYHQWNSKPEF+VCTHRVVSY D++K ++E T Sbjct 308 IWLQTRYYITYHQWNSKPEFIVCTHRVVSYVDVMKQNRKEET 349 Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/84 (49%), Positives = 51/84 (61%), Gaps = 8/84 (10%) Query 486 QYLEPAPYVGAVGVPAVLPLSLPPIPV-----IVAQDQAQLQLQRTHRELQQMIVRQQEE 540 Q+LEP YV A+ + V+ P P+ AQ Q Q+ LQR H ELQ +I +QQ E Sbjct 432 QFLEPPQYVAAIPMQPVISGFSPIQPLDNVMLTPAQTQMQIDLQRKHAELQAIIGQQQAE 491 Query 541 LRQVKEQLLFARLGIL---QPVIN 561 LR+V EQLL ARLG+L QPV N Sbjct 492 LRRVSEQLLMARLGLLPQNQPVQN 515 > TC004710-PA pep:novel scaffold:Tcas3:ChLGX:1311403:1330465:1 gene:TC004710 transcript:TC004710-RA description:"Putative uncharacterized protein " Length=679 Score = 131 bits (330), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 141/530 (27%), Positives = 236/530 (45%), Gaps = 89/530 (17%) Query 2 DDDGDDKDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNN---RKMDKSTVLKSTISFL 58 DD DK+ R E++RR++ + EL MV T + RK DK T+L+ ++ + Sbjct 102 DDTIQDKERFARENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHM 161 Query 59 KNHNEITVRSRAHDVQED-WKPAFLSNEEFTYLVLEALEGFVMVFSA--------SGCIY 109 K +R + + +KP+FL+++E +L+LEA +GF+ V S C+Y Sbjct 162 K-----ALRGTGNTSADGTYKPSFLTDQELKHLILEAADGFLFVVSCDTGRSDWYGSCLY 216 Query 110 ---------YVSESVTSLLGHTPGDIIN-----------KSIFDLAFVDDRPNLYNILQN 149 V E +++ G I++ +S L R + + Sbjct 217 DNIHPEDVEKVREQLSTQEPQNTGRILDLKTGTVKKEGHQSSMRLCMGSRRGFICRM--K 274 Query 150 GGTLDPTQVVTTDNPISFRCRL-QRGTLD-FRDEVTYELVQFDGHFRK----NLESNENG 203 G L P + + RL QR +L RD Y +V G+ + ++ + Sbjct 275 VGNLTPENMA-----VGHLNRLKQRNSLGPGRDGQNYAVVHCTGYIKNWPPTDMFTGVQM 329 Query 204 HHSYQDE-HESRLLFVCTGRLYMPQL--VRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAP 260 +DE H S V GRL + D+S ++ +EF SRHS++ KF F+D R Sbjct 330 ERQTEDEIHTSHCCLVAIGRLQVTSTPNTSDLSGSNSA-AEFISRHSMDGKFSFVDQRVI 388 Query 261 PIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQ-KGELTSCYYRFLTKGQQWIWLQT 319 ++GY P E+LG S ++++H +D + E +++ KG++ S YRF K ++W+WL+T Sbjct 389 GLLGYSPPELLGKSCFEFFHPEDQTHMKDSFEQVLKLKGQVLSVMYRFRAKNREWVWLRT 448 Query 320 RFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETEE----------SVRDCDHNG 369 + + + E++VCT+ + A + S ++ TETE+ S++ D Sbjct 449 SAFAFLNPYTDDVEYIVCTN---TTAKSLHSGQEGTTETEQVAYQQPGLDYSLQRRDAGL 505 Query 370 SSLKDPSTEDAMVPVSPSYMSEASDAFATSYNSMSKLASVKSAATSGSTSATVATLG--- 426 S PST P + S + ++ + S +A AT+ S+SA V LG Sbjct 506 YSHMLPSTH-IQNPQQTARPSSGQNVYSNYEPTASPIAYGSPQATASSSSAGV--LGRLT 562 Query 427 ----TAITTASATW------PPRSSYLL-----YTTGSDTTSVSGGSRSS 461 T+ T A+A W P Y + G T +SGGSR+S Sbjct 563 KGSTTSPTPAAAAWTLRQAQPAADGYQYNQPSPRSPGPTYTQLSGGSRAS 612 > TC011105-PA pep:known scaffold:Tcas3:ChLG10:7007258:7048781:-1 gene:TC011105 transcript:TC011105-RA description:"Spineless " Length=624 Score = 127 bits (320), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 162/355 (46%), Gaps = 54/355 (15%) Query 15 TRNLSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTISFLKNHNEITV----- 66 T++ K+ R++ N ++ L S++ K+D+ ++L+ ++S+L+ + V Sbjct 12 TKSNPSKRHRERLNAELDTLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVVMHKD 71 Query 67 -----RSRAHDVQE-DWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLG 120 R D+ D P L E F L+AL GF+M+ + G +++ + S+ LG Sbjct 72 KDDGGLHRTRDLTAFDHTP--LDGEMF----LQALNGFLMILTCEGEVFFATHSIEGYLG 125 Query 121 HTPGDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQ-------VVTTDN--------PI 165 DI+++S+++L +DR L L L P V+ +N + Sbjct 126 FHQSDIVHQSVYELVHSEDREELQRQLMWNSFLPPESANMGLQDVLLPENCHLLERSFTV 185 Query 166 SFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYM 225 FRC L + R ++ + G RK+ DE L +CT + Sbjct 186 RFRCLLDNTSGFLRLDIRGRVKVLHGQNRKS------------DEAPLALFAICTP--FG 231 Query 226 PQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLE 285 P + ++ + + F S+H L+ + +D R ++GY E+ GYD H+DDL Sbjct 232 PPSLLEIPQKEVM---FKSKHKLDLALVSMDQRGKMLLGYSDSELATMGGYDLVHYDDLA 288 Query 286 KVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHR 340 V S H+ L++ G YRF TK QW WLQT + Y NSKP+FV+ THR Sbjct 289 YVASAHQELLKTGASGMIAYRFQTKDGQWQWLQTSSRLVYK--NSKPDFVISTHR 341 > TC003908-PA pep:known scaffold:Tcas3:ChLG3:31949876:32002849:1 gene:TC003908 transcript:TC003908-RA description:"Putative uncharacterized protein " Length=569 Score = 123 bits (308), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 95/340 (28%), Positives = 166/340 (49%), Gaps = 25/340 (7%) Query 13 RRTRNLSEKKRRDQFNMLVNELGS---MVSTNNRKMDKSTVLKSTISFLKNHNEITVRSR 69 R RN +EK RRD+ N + EL + MV+ + ++MDK+++L+ + L+ + + Sbjct 97 REMRNRAEKMRRDKLNSYIGELATLVPMVARSAKRMDKTSILRLAATHLRIYQTLLSGKN 156 Query 70 AHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINK 129 +Q P + LV E L GF+++ + +G I +VS +V LLGH D++ + Sbjct 157 HPHIQ---LPKHVDQYLLEQLVCEQLGGFLLILTPNGKIVFVSHTVEHLLGHLQTDLMGQ 213 Query 130 SIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQRGTLDFRDEVTYELVQF 189 SIF++ DD L + LD D F RL+R V YE V+ Sbjct 214 SIFNITSPDDHDRLRMYINTESVLD------GDWKKCFNIRLKRAGPRTESAV-YEPVRI 266 Query 190 DGHFRKNLESNENGHHSYQDE----HESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSR 245 G R +++ N + S E ++ L FV +++ P+ + + L + R E+ +R Sbjct 267 MGVHRPGFDNDCNKNTSTSKEIALNNDVLLFFV---KVFRPEPLCE-RLFEASREEYVTR 322 Query 246 HSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGEL--TSC 303 H ++ + + D R I GY+ EV G S + + H +D+ V+ + +GE +SC Sbjct 323 HLIDGRIIGCDQRISFIAGYMTEEVSGLSAFKFMHREDVRWVMIALRQMYDRGESKGSSC 382 Query 304 YYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 YR L++ Q+I+L+T ++ + F VC + +VS Sbjct 383 -YRLLSRNGQFIYLRTFGFLEIDDQGTVESF-VCVNTLVS 420 > TC013241-PA pep:known scaffold:Tcas3:ChLG5:14849142:14868043:-1 gene:TC013241 transcript:TC013241-RA description:"Hypoxia inducible factor 1, alpha subunit " Length=879 Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/341 (27%), Positives = 170/341 (50%), Gaps = 29/341 (9%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRK---MDKSTVLKSTISFLKNHNEITVRS 68 K ++R+ + + RR + + +LG+ + + + +DK++V++ I++L+ + IT+ Sbjct 104 KEKSRD-AARSRRSKETEVFTDLGNALPISQEQVSQLDKASVMRLAIAYLRVRDMITLVP 162 Query 69 RAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIIN 128 A + +D K L++E + L+ALEGF++V S+ G I Y+SE+V+ LG T D++ Sbjct 163 EAPE-PDDHK--ILTDES---IFLKALEGFLLVMSSEGDIVYMSENVSEYLGITQIDLMG 216 Query 129 KSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQ-----RGTLDFRDEVT 183 ++IF+ + D + IL + T+ P SF RL+ +G T Sbjct 217 QNIFEYSHPCDHDEIKEILSTKTREE------TETPKSFFIRLKCTLTSKGRSVNLKSAT 270 Query 184 YELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFT 243 Y+++ GH +++ ++G+ R L + P + R F Sbjct 271 YKVIHCTGHI---VQTEDDGNEENAKGTLRRCLVAIGQPIPHPSNIE----APLPRQTFL 323 Query 244 SRHSLEWKFLFLDHR-APPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTS 302 ++HSL+ KF D + ++GY +++G S YDY+H D + + S + L KG+ + Sbjct 324 TKHSLDMKFTHADDKIMMDVLGYDSEDLVGKSVYDYHHAMDSDAICSAFKCLFSKGQCET 383 Query 303 CYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 YRFL K ++W+ T+ + KP+ VVC + V+S Sbjct 384 NRYRFLAKTGGYVWVLTQATLINDNKTMKPQSVVCVNYVIS 424 > TC002494-PA pep:novel scaffold:Tcas3:ChLG3:32097897:32110198:-1 gene:TC002494 transcript:TC002494-RA description:"Cycle protein " Length=480 Score = 95.5 bits (236), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 54/144 (38%), Positives = 87/144 (60%), Gaps = 16/144 (11%) Query 2 DDDGDD------KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVS---TNNRKMDKSTVLK 52 DD+G+D D+ K++ + EK+RRD+ N + EL +M+ +RK+DK TVL+ Sbjct 101 DDNGEDVKSVKTNDENKKQNHSEIEKRRRDKMNTYITELSAMIPMCHAMSRKLDKLTVLR 160 Query 53 STISFLKNHNEITVRSRAHDVQED-WKPAFLSNEEFTYLVLEALEGFVMVFSAS-GCIYY 110 + LK T+R H E +KP+FLS++E +L+L+A +GF+ V G I Y Sbjct 161 MAVQHLK-----TIRGAVHSYTEGHYKPSFLSDQELKHLILQAADGFLFVVGCDRGRILY 215 Query 111 VSESVTSLLGHTPGDIINKSIFDL 134 VSESV+ +L + GD++ +S+FD+ Sbjct 216 VSESVSKVLNFSQGDLLGQSLFDI 239 > TC014256-PA pep:novel scaffold:Tcas3:ChLG5:9916602:9933754:1 gene:TC014256 transcript:TC014256-RA description:"Putative uncharacterized protein " Length=1460 Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 87/362 (24%), Positives = 164/362 (45%), Gaps = 54/362 (15%) Query 19 SEKKRRDQFNMLVNELGSMVSTN-------NRKMDKSTVLKSTISFLKNHNEITVRSRAH 71 +EK+RR+Q N+ + EL ++S N + K DK +L+ T++ +++ + S++ Sbjct 28 NEKRRREQENIYIEELAELISANFADMSSLSVKPDKCAILQETVNQIRSIKQRESASQSS 87 Query 72 D-VQE----DWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDI 126 D VQ+ +P LSNE + L+LEALEGF+ V +A G + +V+E+V++ + T +I Sbjct 88 DPVQQGEVSSSRPTILSNEVYGPLLLEALEGFLFVVNAEGKVEHVTENVSNYIKFTRDEI 147 Query 127 INKSIFDLAFVDDRP----NLYNILQNGGTLDPTQVVTTDNPISFRCRLQRGTLDFRDEV 182 SI++ + D +L ++ G ++ TT SF R D +DE Sbjct 148 FGNSIYNFIHLGDHARFTTSLMPMIGWG-----SESTTTTRSRSFSVRFLVKPPDDQDET 202 Query 183 T---------YELVQFDG-HFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRDV 232 YEL+ R + +++ D +S +C + + Sbjct 203 VEEKQQRVNCYELMHISSTQLRDQVSVSDD------DGADSGPYLLC--------VASRI 248 Query 233 SLVDTIRS---EFTSRHSLEWKFLFLDHR--APPIIGYLPFEVLGTSGYDYYHFDDLEKV 287 S D + S +FT++ K + +D + P ++ E++ + D D+ K+ Sbjct 249 SHRDKVISGIEQFTTKLDTSGKIIGVDASGVSAPYSQFINKELMDRALRDLVFQQDVHKL 308 Query 288 VSCHEALMQKGELTSCYYRFLTKGQQWIWLQTR---FYITYHQWNSKPEFVVCTHRVVSY 344 + + + G+ TS YR +++ +QT+ F H N +F++ TH +V Sbjct 309 NTHLKETIHTGQATSAVYRLQLGQDKYVQVQTKSKLFKTNPHNSNDI-DFIMATHSIVGE 367 Query 345 AD 346 D Sbjct 368 YD 369 > TC016205-PA pep:known scaffold:Tcas3:ChLG10:9299772:9303072:-1 gene:TC016205 transcript:TC016205-RA description:"Putative uncharacterized protein " Length=314 Score = 79.7 bits (195), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query 217 FVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGY 276 V G P + ++ L + F R SL+ K +FLD R + GY P +++ + Y Sbjct 3 LVAVGHSLPPSAITEIKLHANM---FMFRASLDLKLIFLDARVAQLTGYEPQDLIEKTLY 59 Query 277 DYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVV 336 Y H D+ + H L+ KG++T+ YYRFL+KG W+W+Q+ I ++ +S+P +V Sbjct 60 HYIHGSDIMPMRFAHHQLLCKGQVTTKYYRFLSKGGGWVWMQSYATIVHNSRSSRPHCIV 119 Query 337 CTHRVVS 343 + V+S Sbjct 120 SVNYVLS 126 > TC001448-PA pep:novel scaffold:Tcas3:Unknown:5129126:5136919:-1 gene:TC001448 transcript:TC001448-RA description:"Trachealess " Length=851 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 93/420 (22%), Positives = 172/420 (41%), Gaps = 64/420 (15%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NH-- 61 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 92 KEKSRD-AARSRRGKENFEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 150 Query 62 ----------NEITVRSRAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYV 111 N+ R+ V F + T+ +L++L+GF + +A G Y+ Sbjct 151 PPWSRDGPPPNKTLKAGRSRSVAGIAMDMF-EQHQGTH-ILQSLDGFALALAADGRFLYI 208 Query 112 SESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQNG------------GTLDPTQVV 159 SE+V+ LG + ++ S+FD D + L G G+ + Sbjct 209 SETVSIYLGLSQVEMTGSSVFDYIHHLDHSEMAEQLGLGLAQGQNLASPGSGSEESASTA 268 Query 160 TTDNP-----ISFRCRLQRGTLD--FRDEVTYELVQFDGHFRKN----------LESNEN 202 T+NP +S LD F + L + HF+ + L Sbjct 269 GTNNPDVSTIMSIGTNPPFKGLDRAFCVRMKSTLTKRGCHFKSSGYRVVLMLCRLRPQYT 328 Query 203 GHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPI 262 HS + + L V P V ++ L + F +R + +++ + + + Sbjct 329 FSHSRKSQ-PPLLGMVALAIALPPPSVHEIRLESDM---FVTRINFDFRIAHCEPKVSDL 384 Query 263 IGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFY 322 + Y E+ G + Y H +D K+ CH L+ KG++ + YYR + K + W+QT Sbjct 385 LDYTAEELTGRNLYTLCHGEDANKLRKCHIDLIHKGQVLTHYYRLMNKSGGYTWMQTCAT 444 Query 323 ITYHQWNSKPEFVVCTHRVVS---YADIIKSTKQERTET-----EESVRDCDHNGSSLKD 374 + + N+ + ++C + V+S Y ++I Q T EE+ + NGS D Sbjct 445 VVCNSKNADEQNIICVNYVISGREYENMIMDCCQMEDNTHMVKREEANSNDPENGSPDAD 504 > TC013566-PA pep:novel scaffold:Tcas3:ChLGX:4613107:4632677:-1 gene:TC013566 transcript:TC013566-RA description:"Putative uncharacterized protein " Length=401 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/350 (23%), Positives = 156/350 (45%), Gaps = 36/350 (10%) Query 10 DTKRRTRNLSEKKRRDQFNMLV---NELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITV 66 D + T+ S K RRD N + EL + + +++ + ++ +++ N Sbjct 20 DANKSTKGAS-KLRRDLINAEIANLRELLPLPPSTRQRLSQLQLMALVCVYVRKANYFQQ 78 Query 67 RSRAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDI 126 + HDV P N F+ +AL GF+M+ + +G + Y+S++ LGH+ D+ Sbjct 79 AFKCHDVGLHQSPT--PNIGFS----KALNGFLMMMTQNGKLLYISDNAAEYLGHSMEDL 132 Query 127 I--NKSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPIS-FRCRLQ-----RGTLDF 178 + S++D+ +D + + + G ++ +T I F CR+ R + F Sbjct 133 LIHGDSVYDI--IDKQDHQAIQCELGRPVNSGSNSSTSEEIRLFLCRMNVSRNARRQMRF 190 Query 179 RDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTI 238 D+ ++V G + L +E L CT + MP+ R+ +V Sbjct 191 GDQ---KVVLVQGRYLSFL--------PLCSRNEPVFLATCTP-VAMPE-TREC-VVQGA 236 Query 239 RSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKG 298 + FTS HS++ +F+ +D+ +G+ ++ G S Y H++ + + H + Q Sbjct 237 TNVFTSVHSMDMRFIHIDNNGEFYLGFPRADLQGVSWYRLLHWECTREAQTKHRLITQSE 296 Query 299 ELTSCYY--RFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYAD 346 + SC +F + WIW+ + +S+ +VCT++V+S A+ Sbjct 297 QERSCILLAQFQRRSGDWIWMHCVLQVKESSESSQQPVIVCTNQVLSEAE 346 > TC012997-PA pep:novel scaffold:Tcas3:ChLG5:19086200:19091419:-1 gene:TC012997 transcript:TC012997-RA description:"Period " Length=1149 Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 110/269 (41%), Gaps = 34/269 (13%) Query 96 EGFVMVFSA-SGCIYYVSESVTSLLGHTPGDI-INKSIFDLAFVDDRPNLYNILQNGGTL 153 +GF V S G + Y + S+T++LG P D+ + +S D DR + + G L Sbjct 192 DGFCCVISMYDGVVLYTTPSLTAVLGF-PKDMWLGRSFIDFVHPKDRETFSSQVTTGIAL 250 Query 154 ----DPTQVVTTDNPISFRCRLQRGTLD-----FRDEVTYELVQFDGHFRKNLESNENGH 204 + N + R RG V+Y+ Q FR Sbjct 251 PLVDSQGKFKDIKNSLYVCLRKYRGLKSSGFGVVEKAVSYQAFQLTVTFRH--------- 301 Query 205 HSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSE------FTSRHSLEWKFLFLDHR 258 D +S+ L G +++ + V + E F RH+ F +D Sbjct 302 --LNDTPDSKKLLDTNGGMFLVVVANPVYSSYKVPEERVKFAKFGMRHTAACTFSHVDPD 359 Query 259 APPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELT-----SCYYRFLTKGQQ 313 G+LP ++LG S +D+YH +D+ + +E++M ++ S YRF + Sbjct 360 VVTNFGFLPQDMLGKSIFDFYHPEDMSFLKEVYESVMTMCQIAGSVFRSKPYRFAVQNGG 419 Query 314 WIWLQTRFYITYHQWNSKPEFVVCTHRVV 342 ++ ++T + + W+ + EFV+ HRV+ Sbjct 420 FVMIETEWSSFVNPWSRRLEFVIGLHRVL 448 > TC016204-PA pep:novel scaffold:Tcas3:ChLG10:9309032:9337681:-1 gene:TC016204 transcript:TC016204-RA description:"Putative uncharacterized protein sim " Length=438 Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/146 (23%), Positives = 68/146 (47%), Gaps = 16/146 (11%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITVRS 68 K +++N + + RR++ N EL ++ + ++DK++V++ T S+LK Sbjct 199 KEKSKN-AARSRREKENAEFIELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVF---- 253 Query 69 RAHDVQEDW-------KPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGH 121 + + W P +E +L+ L+GF+ V + G I Y+SE+ + LG Sbjct 254 -PDGLGDAWGATPVVPNPREAPIKELGSYLLQTLDGFIFVVAPDGKIMYISETASVHLGL 312 Query 122 TPGDIINKSIFDLAFVDDRPNLYNIL 147 + ++ SI++ D + +L Sbjct 313 SQVELTGNSIYEYIHPADHDEMTAVL 338 > TC001593-PA pep:novel scaffold:Tcas3:Unknown:29801960:29805157:-1 gene:TC001593 transcript:TC001593-RA description:"Putative uncharacterized protein " Length=316 Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 35/54 (65%), Gaps = 5/54 (9%) Query 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVST-----NNRKMDKSTVLKSTISFLK 59 ++++ R + EKKRRD+ NM ++EL +V + + K++K+ +L+ T+ LK Sbjct 68 SRKKRRGVIEKKRRDRINMSLSELKRLVPSAFEKQGSAKLEKAEILQMTVDHLK 121 > TC014225-PA pep:known scaffold:Tcas3:ChLGX:4462545:4473486:1 gene:TC014225 transcript:TC014225-RA description:"Putative uncharacterized protein " Length=500 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 34/61 (56%), Gaps = 9/61 (15%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNR---------KMDKSTVLKSTISFL 58 KD K+ N+ E++RR N + ELG+++ NN + +K T+LKS++ ++ Sbjct 274 KDRQKKDNHNMIERRRRFNINDRIKELGTLLPKNNDPYYEIVRDVRPNKGTILKSSVEYI 333 Query 59 K 59 K Sbjct 334 K 334 > TC007163-PA pep:known scaffold:Tcas3:ChLG4:9367025:9374489:-1 gene:TC007163 transcript:TC007163-RA description:"Putative uncharacterized protein GLEAN_07163 " Length=1025 Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust. Identities = 21/56 (38%), Positives = 30/56 (54%), Gaps = 3/56 (5%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTIS---FLKNHN 62 + KR N E+K R N + EL ++V K++KS +LK TI FL+N N Sbjct 246 EVKRSAHNAIERKYRTSINDKIVELKNIVVGTEAKLNKSGILKKTIEYIRFLQNSN 301 > TC012851-PA pep:known scaffold:Tcas3:ChLG9:21038364:21039704:1 gene:TC012851 transcript:TC012851-RA description:"Putative uncharacterized protein " Length=249 Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust. Identities = 16/58 (28%), Positives = 33/58 (57%), Gaps = 7/58 (12%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTISFLKN 60 D +R + + EK+RR + N +NEL +++ + K++K+ +L+ T+ L+N Sbjct 33 DNRRSNKPIMEKRRRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKHLQN 90 > TC010848-PA pep:novel scaffold:Tcas3:ChLGX:6922287:6926338:1 gene:TC010848 transcript:TC010848-RA description:"Medea " Length=576 Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 30/64 (47%), Gaps = 4/64 (6%) Query 383 PVSPSYMSEASDAFATSYNSMSKLASVKSAATSGSTSATVATLGTAITTASATWPPRSSY 442 PVSP + F S ++ + + + SGS A AT+G + T A TW S+ Sbjct 249 PVSPHLQQ---NGFNNSTHTTTAVVNNNGGTISGSQPAATATMGQSFTGAGGTW-TGSNT 304 Query 443 LLYT 446 L YT Sbjct 305 LTYT 308 > TC012353-PA pep:known scaffold:Tcas3:ChLG9:8235609:8243887:1 gene:TC012353 transcript:TC012353-RA description:"Putative uncharacterized protein " Length=2236 Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/72 (28%), Positives = 32/72 (44%), Gaps = 0/72 (0%) Query 407 ASVKSAATSGSTSATVATLGTAITTASATWPPRSSYLLYTTGSDTTSVSGGSRSSQRNSS 466 +++KS+ + V+ + + TT A P +S +T ++ T VS G R Sbjct 1131 STIKSSVSRRRCPTPVSMISSVPTTCPAPEPKNTSPTPVSTSAEPTPVSTGKRRRCPTPV 1190 Query 467 QELQRLPEPALV 478 Q PEPA V Sbjct 1191 QTTSSTPEPATV 1202 > TC007370-PA pep:known scaffold:Tcas3:ChLG4:6329965:6356132:-1 gene:TC007370 transcript:TC007370-RA description:"Tyrosine-protein kinase receptor " Length=1389 Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 9/145 (6%) Query 273 TSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYR----FLTKGQQWIWLQTRFYITYHQW 328 ++G+ + D+ + V SC + ++ C R + G W++ T T + Sbjct 336 STGFCEFFEDEGKCVKSCPRHKVHNYDIMKCMTRKECETMLNGTWWVFNDTCVE-TCPIY 394 Query 329 NSKPEFVV--CTHRVVSYADIIKSTKQERTETEESVRDCDHNGSSLKDPSTEDAMVPVSP 386 N++ + C + Y + E+ + + ++DC H +SL+ T+D +VP Sbjct 395 NNRDKNAKGGCVYAGKKYKKECRGGLIEKLDVLQEMKDCTHINTSLELRITQDYLVPYLE 454 Query 387 SYMSEASDAFATSYNSMSKLASVKS 411 Y+ + Y ++S+ ++KS Sbjct 455 KYLGNVVS--ISGYLNVSRSGNIKS 477 > TC006161-PA pep:known scaffold:Tcas3:ChLG8:4098560:4102590:1 gene:TC006161 transcript:TC006161-RA description:"Putative uncharacterized protein " Length=732 Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust. Identities = 12/38 (32%), Positives = 18/38 (47%), Gaps = 0/38 (0%) Query 278 YYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWI 315 +Y ++ VV+ L+Q G+ CYY F WI Sbjct 363 FYIIPVIQLVVTLQSFLIQTGDFDLCYYNFRCANPLWI 400 > TC030636-PA pep:novel scaffold:Tcas3:ChLG7:15441513:15442895:1 gene:TC030636 transcript:TC030636-RA description:"Putative uncharacterized protein " Length=408 Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust. Identities = 16/56 (29%), Positives = 28/56 (50%), Gaps = 2/56 (4%) Query 201 ENGHHSYQDEHESRLLFVCTGRLYMPQL--VRDVSLVDTIRSEFTSRHSLEWKFLF 254 E H S + E + L+ C G +P + D++ + I + ++ LEW+FLF Sbjct 167 EEQHTSSEKEKDRSLVPFCRGLDLIPSYPSLLDLNQIVFINANLPQQYQLEWRFLF 222 Lambda K H a alpha 0.317 0.131 0.385 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2857718220 Database: Tribolium_castaneum.Tcas3.24_edited.pep.all.fa Posted date: Jan 15, 2015 11:02 AM Number of letters in database: 7,424,042 Number of sequences in database: 16,526 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40