BLASTP 2.2.27+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Melitaea_cinxia.MelCinx1.0.24_edited.pep.all.fa 16,674 sequences; 5,286,250 total letters Query= EHJ69324 pep:known supercontig:DanPle_1.0:JH386160:331454:341674:-1 gene:KGM_10878 transcript:EHJ69324 description:"Clock " Length=600 Score E Sequences producing significant alignments: (Bits) Value MCINX000525-PA pep:novel scaffold:MelCinx1.0:scaffold1141:49858... 316 7e-104 MCINX009283-PA pep:novel scaffold:MelCinx1.0:scaffold3247:12877... 94.4 6e-21 MCINX006746-PA pep:novel scaffold:MelCinx1.0:scaffold2404:3666:... 88.2 1e-18 MCINX002970-PA pep:novel scaffold:MelCinx1.0:scaffold1637:32042... 71.6 4e-15 MCINX008816-PA pep:novel scaffold:MelCinx1.0:scaffold3050:2773:... 70.9 3e-13 MCINX001453-PA pep:novel scaffold:MelCinx1.0:scaffold1347:10987... 63.9 5e-11 MCINX003221-PA pep:novel scaffold:MelCinx1.0:scaffold1687:79250... 61.6 3e-10 MCINX002971-PA pep:novel scaffold:MelCinx1.0:scaffold1637:34090... 58.9 5e-10 MCINX011636-PA pep:novel scaffold:MelCinx1.0:scaffold4586:20982... 43.9 4e-05 MCINX000524-PA pep:novel scaffold:MelCinx1.0:scaffold1141:43349... 39.7 3e-04 MCINX011109-PA pep:novel scaffold:MelCinx1.0:scaffold4232:9688:... 37.7 0.006 MCINX008309-PA pep:novel scaffold:MelCinx1.0:scaffold2861:22397... 32.7 0.044 MCINX007805-PA pep:novel scaffold:MelCinx1.0:scaffold2702:5529:... 33.5 0.068 MCINX007807-PA pep:novel scaffold:MelCinx1.0:scaffold2702:41305... 31.6 0.13 MCINX012577-PA pep:novel scaffold:MelCinx1.0:scaffold5073:11937... 30.8 0.18 MCINX006807-PA pep:novel scaffold:MelCinx1.0:scaffold2436:6935:... 32.0 0.30 MCINX010653-PA pep:novel scaffold:MelCinx1.0:scaffold397:27259:... 31.6 0.35 MCINX004280-PA pep:novel scaffold:MelCinx1.0:scaffold1872:45679... 29.6 1.5 MCINX016102-PA pep:novel scaffold:MelCinx1.0:scaffold896:30854:... 30.0 2.2 MCINX010661-PA pep:novel scaffold:MelCinx1.0:scaffold3999:3904:... 29.6 2.3 MCINX014850-PA pep:novel scaffold:MelCinx1.0:scaffold751:58209:... 28.5 2.6 MCINX003897-PA pep:novel scaffold:MelCinx1.0:scaffold1814:43636... 29.3 3.2 MCINX009422-PA pep:novel scaffold:MelCinx1.0:scaffold3305:1964:... 28.5 4.2 MCINX004301-PA pep:novel scaffold:MelCinx1.0:scaffold1874:33093... 28.1 7.3 MCINX005105-PA pep:novel scaffold:MelCinx1.0:scaffold2008:10270... 28.1 7.8 > MCINX000525-PA pep:novel scaffold:MelCinx1.0:scaffold1141:49858:68795:-1 gene:MCINX000525 transcript:MCINX000525-RA Length=224 Score = 316 bits (809), Expect = 7e-104, Method: Compositional matrix adjust. Identities = 154/199 (77%), Positives = 166/199 (83%), Gaps = 16/199 (8%) Query 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITVRSRA 70 TKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKST+LKSTISFLKNHNEITVRSRA Sbjct 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTILKSTISFLKNHNEITVRSRA 70 Query 71 HDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKS 130 HDVQEDWKP FLSNEEFTYLVLEALEGFVMVFSA+G IYYVSES+ SLLGH P +I+NKS Sbjct 71 HDVQEDWKPVFLSNEEFTYLVLEALEGFVMVFSATGQIYYVSESIMSLLGHNPSNIVNKS 130 Query 131 IFDLAFVDDRPNLYNILQN-GGTLDPTQVVTT---------------DNPISFRCRLQRG 174 IFDL F DDRPNLY +LQN + P+Q VT+ +N I F+C LQRG Sbjct 131 IFDLVFEDDRPNLYGLLQNPVAVIHPSQTVTSANEVAESALVLISKFENEIRFQCHLQRG 190 Query 175 TLDFRDEVTYELVQFDGHF 193 TLDFRDE TYELVQF+GHF Sbjct 191 TLDFRDETTYELVQFNGHF 209 > MCINX009283-PA pep:novel scaffold:MelCinx1.0:scaffold3247:12877:43917:1 gene:MCINX009283 transcript:MCINX009283-RA Length=413 Score = 94.4 bits (233), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 43/365 (12%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 +T R RN +EK+RRD+ N V L ++V + RK++K +VL+ +L++H + Sbjct 1 ETPRELRNKAEKQRRDKLNESVARLAAIVPPVVKSGRKINKRSVLRLAAHYLRSHQHVFG 60 Query 67 RSRAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDI 126 S D P F + FT +L+ L+GF++ + G I VS ++ LG+T ++ Sbjct 61 NSI------DRGPEFSAG--FTSALLKNLKGFLITTTYKGLIVVVSPNIQEYLGYTELEL 112 Query 127 INKSIFDLAFVDDR--------PNLYNILQNGGTLDPTQ-----VVTTD---NPISFRCR 170 + +++F + DD P + NG + P + V D SF R Sbjct 113 LGQNVFSIIHKDDHQLLAEQLFPKSCTLSSNGQLMIPKENGAEKKVAEDLANEKRSFTIR 172 Query 171 LQRGTLDFRDE-VTYELVQFDGHFRKNLESNENGH---------HSYQDEHESR--LLFV 218 ++ L+ R E Y +G RK+ + G Q+ S ++FV Sbjct 173 FKK--LNQRSEPAQYVTCHVEGSLRKSDAAGATGEVIQMRRRVRSRRQNPFSSGNDIVFV 230 Query 219 CTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDY 278 R + + + L ++ + E+ +RHS++ + + + R + GY+ EV G + ++ Sbjct 231 GMVRPNVDTFLSESGL-ESFKMEYRTRHSIDGEIIQCEQRIALVTGYMTHEVKGVNAMNF 289 Query 279 YHFDDLE-KVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVC 337 H DD+ +++ E Q+ YR +TK ++I+++T + + VC Sbjct 290 MHRDDVRWVIIALREMYDQRRLFGESCYRLMTKNGEFIYMRTLGQLDVDKDTKAVTSFVC 349 Query 338 THRVV 342 T+ VV Sbjct 350 TNTVV 354 > MCINX006746-PA pep:novel scaffold:MelCinx1.0:scaffold2404:3666:29838:1 gene:MCINX006746 transcript:MCINX006746-RA Length=535 Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 104/378 (28%), Positives = 162/378 (43%), Gaps = 90/378 (24%) Query 2 DDDGDDKDDTKR----RTRNLSE--KKRRDQFNMLVNELGSMV---STNNRKMDKSTVLK 52 +DDG++ + R + +N SE K+RRD+ N ++EL +MV RK+DK TVL+ Sbjct 66 EDDGNEDSRSSRSMPDKKQNHSEIEKRRRDKMNTYISELSAMVPMCGAMARKLDKLTVLR 125 Query 53 STISFLKN------HNEITVRSRAHDVQEDWKPAFLSNEEFTYLVLEAL-EGFVMVFSAS 105 + L++ +TVR R PAFLS E LVL+A + F+MV Sbjct 126 MAVQHLRSVRGALSAGPLTVRPR---------PAFLSERELNALVLQAAKDCFLMVVGCD 176 Query 106 -GCIYYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQ-----------NGGTL 153 G + YVS SVT LL + +++ +S+FD+ D + L + T+ Sbjct 177 RGRLMYVSASVTKLLHYDQSELLGQSLFDILHPKDVAKVKEQLSSSDLSPRERLIDAKTM 236 Query 154 DPTQ--VVTTDNPI------SFRCRLQ-RGTLDFRDEVTYELVQFDGHFRK-------NL 197 P + VV + + SF CR++ R D ++ T ++ Sbjct 237 LPVKADVVAGASKLCPGARRSFFCRIKCRMNNDINNQPTNTTTSPSSTHQQPGQPNQVKE 296 Query 198 ESNENGHHSYQDEHESRLLFV-CTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLD 256 ES+ N + HE + V CT L R V+L Sbjct 297 ESDANAKLRKKQAHEKKYCVVQCTA------LARKVTLA--------------------- 329 Query 257 HRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHE-ALMQKGELTSCYYRFLTKGQQWI 315 +G+LP E+LGTS Y+Y +L V H+ AL+++ L + Y F K + Sbjct 330 ------LGFLPQELLGTSLYEYISPAELGVVARTHKAALLKRDALRTPPYCFRRKDGTYA 383 Query 316 WLQTRF--YITYHQWNSK 331 +QT F + + Q NSK Sbjct 384 RIQTHFKPFRYFLQLNSK 401 > MCINX002970-PA pep:novel scaffold:MelCinx1.0:scaffold1637:32042:32691:-1 gene:MCINX002970 transcript:MCINX002970-RA Length=77 Score = 71.6 bits (174), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 35/78 (45%), Positives = 45/78 (58%), Gaps = 2/78 (3%) Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRF 321 ++GY E+ GYD H+DDL V S H+ L++ G YRF TK QW WLQT Sbjct 2 LLGYTDAELANLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGQWQWLQTSS 61 Query 322 YITYHQWNSKPEFVVCTH 339 + Y NSKP+FV+ TH Sbjct 62 RLVYK--NSKPDFVISTH 77 > MCINX008816-PA pep:novel scaffold:MelCinx1.0:scaffold3050:2773:31936:1 gene:MCINX008816 transcript:MCINX008816-RA Length=495 Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 72/298 (24%), Positives = 128/298 (43%), Gaps = 40/298 (13%) Query 91 VLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNIL--- 147 +L++L+GF + +A G Y+SE+V+ LG + ++ SIFD D + L Sbjct 107 ILQSLDGFALSVAADGRFLYISETVSIYLGLSQVEMTGSSIFDYVHQADHAEIAEQLGLS 166 Query 148 ---QNGGTLDPTQVVT-------TDNP-ISFRCRLQRGTLDFRDEVTYELVQFDGHFRKN 196 ++G L+ + T+NP +S + L +R D F Sbjct 167 LAGRSGAGLNSPASGSEEGSQHGTNNPDVSSQMSLAASGSLYRG--------MDRAFCVR 218 Query 197 LESN--ENGHHSYQDEHESRLLFVCT---------GRLYMPQLVRDVSLVDTIRSEFTSR 245 ++S + G H ++ +L +C R P L+ V+L + Sbjct 219 MKSTLTKRGCH-FKSSGYRVVLMLCRLRPQYTFSHSRKTPPSLLGMVALAIALPPPSVHE 277 Query 246 HSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYY 305 LE D R ++GY E+ G + Y H +D K+ CH LM KG++ + YY Sbjct 278 IRLES-----DIRVSELLGYTAEELTGKNLYALCHGEDANKLRKCHVDLMNKGQVLTHYY 332 Query 306 RFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETEESVR 363 R + K + W+QT + N++ + ++C + V+S + +T + + EESV+ Sbjct 333 RLMNKLGGYTWMQTCATVVCSSKNAEEQNIICVNYVISGRE-YPNTVMDCCQLEESVQ 389 > MCINX001453-PA pep:novel scaffold:MelCinx1.0:scaffold1347:109874:127099:-1 gene:MCINX001453 transcript:MCINX001453-RA Length=483 Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 76/334 (23%), Positives = 140/334 (42%), Gaps = 43/334 (13%) Query 19 SEKKRRDQFNMLVNELGSMVS---TNNRKMDKSTVLKSTISFLKNHNEITVRSRAHDV-- 73 + K RRD N ++ L ++ + +++ + ++ +++ N ++HD Sbjct 14 ASKMRRDLINAEISNLRDLLPLPPSTRQRLSQLQLMALVCVYVRKMNYFQQVFKSHDFSY 73 Query 74 QEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDII--NKSI 131 Q +P N F+ +A+ GF+M+ + +G + Y+SE+ LGH+ D++ S+ Sbjct 74 QYQEQPTPTPNIGFS----KAMNGFMMMMTQNGKLLYISENAAEYLGHSMEDLLIHGDSV 129 Query 132 FDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQ-----RGTLDFRDEVTYEL 186 +D+ D + L G + V T + F CR+ R + F D+ ++ Sbjct 130 YDIIDRQDHQMVQIELNRGSNGETENVPKTRH---FFCRMNVSRNARRQMRFGDQ---KV 183 Query 187 VQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRH 246 V GH+ L +E L CT L MP+ V V + FT+ H Sbjct 184 VLIRGHYVSYL--------PLCSRNEPVFLASCTP-LAMPETRECV--VHGATNVFTTIH 232 Query 247 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYR 306 +++ K L +D +G+ E++ S Y H+D L + + H + Q + C Sbjct 233 AMDMKILHIDSNGEWHLGWKKSELVDISWYQILHWDSLREAQTKHRLITQSDQDKCCI-- 290 Query 307 FLTKGQQ--------WIWLQTRFYITYHQWNSKP 332 L K QQ I L + Y+ + S+P Sbjct 291 LLVKLQQRSGHEEEAAIMLANSWLYQYYGYQSQP 324 > MCINX003221-PA pep:novel scaffold:MelCinx1.0:scaffold1687:79250:98751:-1 gene:MCINX003221 transcript:MCINX003221-RA Length=835 Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 18/164 (11%) Query 220 TGRLYMPQLVRDVSL-----VDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTS 274 T L +P+ V D + V + F RHS ++D + P +GYLP +++G+ Sbjct 334 TSVLAVPKNVNDTQIKAANEVISNPKPFVIRHSANGCLEYIDPESVPYLGYLPQDIVGSD 393 Query 275 GYDYYHFDDLEKVVSCHEALMQKGELT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPE 333 Y +DL + +E ++++G + S YR LTK ++ L+T + + W+ K E Sbjct 394 ALKLYRPNDLAYLRQVYETIVKEGAVQRSKPYRMLTKNGDYLKLETEWSSFINPWSRKLE 453 Query 334 FVVCTHRVV----------SYADIIKSTK--QERTETEESVRDC 365 FV+ H +V S A+ K+ K +E E +++R C Sbjct 454 FVIGKHFIVEGPKNPDVFQSPAEPEKAPKLPEEEQENAQTLRQC 497 Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust. Identities = 17/52 (33%), Positives = 25/52 (48%), Gaps = 4/52 (8%) Query 91 VLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPN 142 V+ + FV+ SA+GC+ Y+ LG+ P DI+ L RPN Sbjct 354 VISNPKPFVIRHSANGCLEYIDPESVPYLGYLPQDIVGSDALKLY----RPN 401 > MCINX002971-PA pep:novel scaffold:MelCinx1.0:scaffold1637:34090:149371:-1 gene:MCINX002971 transcript:MCINX002971-RA Length=238 Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 77/150 (51%), Gaps = 11/150 (7%) Query 15 TRNLSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTISFLKNHNEITVRSRAH 71 T++ K+ R++ N ++ L S++ K+D+ ++L+ ++S+L+ + V H Sbjct 54 TKSNPSKRHRERLNAELDTLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVV--MH 111 Query 72 DVQEDWKPAFLSNEEFTYLV------LEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 +ED + + +++ L+AL GF+M+ + G +++ + S+ S LG D Sbjct 112 KEKEDLHAHRRDHTHYEHIMPDGEMFLQALNGFLMILTCEGEVFFATHSIESYLGFHQSD 171 Query 126 IINKSIFDLAFVDDRPNLYNILQNGGTLDP 155 I+++S+++L +DR L L L P Sbjct 172 IVHQSVYELVHSEDREELQRQLLWNSFLPP 201 > MCINX011636-PA pep:novel scaffold:MelCinx1.0:scaffold4586:20982:30096:1 gene:MCINX011636 transcript:MCINX011636-RA Length=203 Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/124 (26%), Positives = 56/124 (45%), Gaps = 34/124 (27%) Query 20 EKKRRDQFNMLVNELGSMVSTNN---RKMDKSTVLKSTISFLKNHNEITVRSRAHDVQED 76 E++RR++ + EL MV T + RK DK T+L+ ++ +K Sbjct 61 ERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMK----------------- 103 Query 77 WKPAFLSNEEFTYLVLEALEGFVMVFSA-SGCIYYVSESVTSLLGHTPGDIINKSIFDLA 135 + EA +GF+ V S +G I YVS+S+ +L ++ G+ + ++D Sbjct 104 -------------ALREAADGFLFVVSCDTGRIIYVSDSIAPVLNYSQGEWYSSCLYDQV 150 Query 136 FVDD 139 DD Sbjct 151 HPDD 154 > MCINX000524-PA pep:novel scaffold:MelCinx1.0:scaffold1141:43349:44788:-1 gene:MCINX000524 transcript:MCINX000524-RA Length=75 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/32 (72%), Positives = 25/32 (78%), Gaps = 2/32 (6%) Query 492 PYVGAVGVPAVLPLSLPPIPVIVAQDQAQLQL 523 PYV AVGVP V LSL P+PV V+ DQAQLQL Sbjct 2 PYVTAVGVPGV--LSLHPLPVSVSPDQAQLQL 31 > MCINX011109-PA pep:novel scaffold:MelCinx1.0:scaffold4232:9688:26535:1 gene:MCINX011109 transcript:MCINX011109-RA Length=266 Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/181 (24%), Positives = 71/181 (39%), Gaps = 27/181 (15%) Query 78 KPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLAFV 137 +P LS E +L+ L+GF+ V + G I Y+SE+ + LG S +++ Sbjct 96 QPRELSIRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLG--------LSQHPHSYL 147 Query 138 DDRPNLYNILQNGGTLDPTQVVTTDNP--ISFRCRLQRGTLDFRDEVTYELVQFDGHFRK 195 P Y + GGT P + + I +C L + Y+++ G+ R Sbjct 148 GHPPLGYPV---GGTWSPNVDIECERAFFIRMKCVLAKRNAGLTTS-GYKVIHCSGYLRA 203 Query 196 NLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFL 255 E + L V G P V ++ L + F R SL+ + +FL Sbjct 204 RRFG----------EGMAPLGLVAVGHSLPPSAVTELKLHSNM---FMFRASLDMRLIFL 250 Query 256 D 256 D Sbjct 251 D 251 > MCINX008309-PA pep:novel scaffold:MelCinx1.0:scaffold2861:22397:23157:1 gene:MCINX008309 transcript:MCINX008309-RA Length=81 Score = 32.7 bits (73), Expect = 0.044, Method: Composition-based stats. Identities = 16/45 (36%), Positives = 25/45 (56%), Gaps = 0/45 (0%) Query 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTI 55 T++R R + EKKRRD+ N + EL +V K + + K+ I Sbjct 24 TRKRRRGVIEKKRRDRINTSLTELKRLVPAACEKQGSAKLEKAEI 68 > MCINX007805-PA pep:novel scaffold:MelCinx1.0:scaffold2702:5529:7596:1 gene:MCINX007805 transcript:MCINX007805-RA Length=141 Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust. Identities = 16/35 (46%), Positives = 23/35 (66%), Gaps = 2/35 (6%) Query 86 EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLG 120 E +Y+ +AL+GFV+V S G I Y SE++ LG Sbjct 41 ELSYM--KALDGFVLVLSQQGDIVYCSENIAEHLG 73 > MCINX007807-PA pep:novel scaffold:MelCinx1.0:scaffold2702:41305:44930:1 gene:MCINX007807 transcript:MCINX007807-RA Length=97 Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats. Identities = 14/49 (29%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query 294 LMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVV 342 + KG+ + YRFL K + W+QT+ + + KP V+C + ++ Sbjct 3 VFSKGQCETSQYRFLAKTGGYAWVQTQATVITDK-QQKPISVICVNYII 50 > MCINX012577-PA pep:novel scaffold:MelCinx1.0:scaffold5073:11937:14743:1 gene:MCINX012577 transcript:MCINX012577-RA Length=73 Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 23/34 (68%), Gaps = 0/34 (0%) Query 89 YLVLEALEGFVMVFSASGCIYYVSESVTSLLGHT 122 ++ +AL GF+M+ + +G + Y+S++ LGH+ Sbjct 38 FIKFKALNGFLMMMTQNGKLLYISDNAAEYLGHS 71 > MCINX006807-PA pep:novel scaffold:MelCinx1.0:scaffold2436:6935:21379:1 gene:MCINX006807 transcript:MCINX006807-RA Length=204 Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust. Identities = 15/58 (26%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTISFLKN 60 D +R + + EK+RR + N +NEL +++ + K++K+ +L+ T+ L+ Sbjct 30 DNRRSNKPIMEKRRRARINNCLNELKALILDAMKKDPARHSKLEKADILEMTVKHLEG 87 > MCINX010653-PA pep:novel scaffold:MelCinx1.0:scaffold397:27259:33516:-1 gene:MCINX010653 transcript:MCINX010653-RA Length=185 Score = 31.6 bits (70), Expect = 0.35, Method: Composition-based stats. Identities = 12/31 (39%), Positives = 21/31 (68%), Gaps = 0/31 (0%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMV 38 +DD +R T N E++RRD+ N + +L ++V Sbjct 86 RDDKRRATHNEVERRRRDKINSWITKLAALV 116 > MCINX004280-PA pep:novel scaffold:MelCinx1.0:scaffold1872:45679:104166:-1 gene:MCINX004280 transcript:MCINX004280-RA Length=156 Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 19/64 (30%), Positives = 31/64 (48%), Gaps = 5/64 (8%) Query 2 DDDGDDKDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTV-LKSTISFLKN 60 DD DDK +RR N++ K+ RD M N+ ++ ++K + L+ + LK Sbjct 86 DDLKDDKYWARRRKNNMAAKRSRDARRMKENQ----IALRAGYLEKENMGLRQEVELLKK 141 Query 61 HNEI 64 N I Sbjct 142 ENHI 145 > MCINX016102-PA pep:novel scaffold:MelCinx1.0:scaffold896:30854:35683:1 gene:MCINX016102 transcript:MCINX016102-RA Length=766 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/87 (23%), Positives = 41/87 (47%), Gaps = 14/87 (16%) Query 214 RLLFVCTGRLYMPQLVRDVSLVDTIRSEFT-----SRHSLEWKFLFLDHRAPPIIGYL-- 266 R L VC +YM R +S V+ ++S + +R+ + ++ R PP++ ++ Sbjct 580 RSLVVCRVYMYMSVTNRSISSVEVLKSAASLLVNLTRYKITGPKIYARERIPPVLKFMWR 639 Query 267 -------PFEVLGTSGYDYYHFDDLEK 286 F +L T + + +DD++K Sbjct 640 FSNSETHLFCILSTYLWLFSKYDDVKK 666 > MCINX010661-PA pep:novel scaffold:MelCinx1.0:scaffold3999:3904:9873:1 gene:MCINX010661 transcript:MCINX010661-RA Length=387 Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 32/62 (52%), Gaps = 2/62 (3%) Query 487 YLEPAPYVGAVGVPAVLPLSLPPIPVIVAQDQAQLQLQRTHRELQQMIVRQQEELRQVKE 546 YL P Y G+ AVL ++ P+I++ D LQ+Q + + +E++++KE Sbjct 304 YLFPGQYEIKEGIGAVLIYNISTEPMIISAD--VLQIQNVDHDWISTVQSADDEIKRIKE 361 Query 547 QL 548 L Sbjct 362 IL 363 > MCINX014850-PA pep:novel scaffold:MelCinx1.0:scaffold751:58209:66329:-1 gene:MCINX014850 transcript:MCINX014850-RA Length=141 Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 30/61 (49%), Gaps = 1/61 (2%) Query 432 ASATWPPRSSYLLYTTGSDTTSVSGGSRSSQRNSSQELQRLPEPALVPQHGIGAQYLEPA 491 AS WP + Y TTG D T + GS+ S S +E P+ + ++G G+ P+ Sbjct 50 ASRQWPCGACYSAVTTGPDGTPLDEGSQQSTLTSGEEQCGTPKGSRK-EYGAGSAAPSPS 108 Query 492 P 492 P Sbjct 109 P 109 > MCINX003897-PA pep:novel scaffold:MelCinx1.0:scaffold1814:43636:46594:-1 gene:MCINX003897 transcript:MCINX003897-RA Length=563 Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/162 (21%), Positives = 69/162 (43%), Gaps = 37/162 (23%) Query 19 SEKKRRDQFNMLVNELGSMVST---NNRKMDKSTVLKSTISFLKNHNEITVRSRAHDVQE 75 +EK+RR+ N ++N+L ++ T ++ DK+ +++ + + V R D Sbjct 61 NEKRRRELENEVINQLEELLGTCLAEVKQPDKNGIVREATKKI-----VDVLQRRRDCPG 115 Query 76 DWKPAFLSNE--------------------EFTYL--VLEALEGF-------VMVFSASG 106 D + N +F+ L ++EA++ + +M ++ G Sbjct 116 DCPLRMVQNVSPVQAGEVSSTQPQPPDSGLQFSELSTLIEAIKHYTGVLGLILMEINSKG 175 Query 107 CIYYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQ 148 I V+E++ L+ ++ KSIF L DD L +L+ Sbjct 176 EIECVTENIKDLVLAERTELYKKSIFSLLHADDHAKLKPLLR 217 > MCINX009422-PA pep:novel scaffold:MelCinx1.0:scaffold3305:1964:11046:-1 gene:MCINX009422 transcript:MCINX009422-RA Length=218 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 14/49 (29%), Positives = 27/49 (55%), Gaps = 9/49 (18%) Query 20 EKKRRDQFNMLVNELGSMVSTNNR---------KMDKSTVLKSTISFLK 59 E++RR N + ELG+++ N + +K T+LKS++ ++K Sbjct 24 ERRRRFNINDRIKELGTLLPKTNDPFYEVIRDVRPNKGTILKSSVDYIK 72 > MCINX004301-PA pep:novel scaffold:MelCinx1.0:scaffold1874:330935:332955:-1 gene:MCINX004301 transcript:MCINX004301-RA Length=422 Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust. Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 7/59 (12%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTISFLK 59 K + ++ + + EKKRR + N +NEL ++ + K++K+ +L+ T+ L+ Sbjct 23 KAELRKTNKPIMEKKRRARINNCLNELKDLLMDAMDKDPARHSKLEKADILELTVKHLQ 81 > MCINX005105-PA pep:novel scaffold:MelCinx1.0:scaffold2008:102704:117549:1 gene:MCINX005105 transcript:MCINX005105-RA Length=351 Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 0/51 (0%) Query 73 VQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTP 123 V D P FLS +EFT L+ L +S GC + + HTP Sbjct 109 VDRDVVPLFLSEDEFTTQGLDDLAKRCAEYSKQGCRFAKWRCPLKIGKHTP 159 Lambda K H a alpha 0.317 0.131 0.385 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1821397524 Database: Melitaea_cinxia.MelCinx1.0.24_edited.pep.all.fa Posted date: Jan 15, 2015 11:02 AM Number of letters in database: 5,286,250 Number of sequences in database: 16,674 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40