BLASTP 2.2.27+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Drosophila_melanogaster.BDGP5.24_edited.pep.all.fa 26,950 sequences; 17,741,228 total letters Query= EHJ69324 pep:known supercontig:DanPle_1.0:JH386160:331454:341674:-1 gene:KGM_10878 transcript:EHJ69324 description:"Clock " Length=600 Score E Sequences producing significant alignments: (Bits) Value FBpp0076500 pep:known chromosome:BDGP5:3L:7757071:7768703:-1 ge... 455 4e-147 FBpp0099478 pep:known chromosome:BDGP5:3L:7757071:7768703:-1 ge... 451 2e-145 FBpp0099480 pep:known chromosome:BDGP5:3L:7757071:7768703:-1 ge... 367 2e-114 FBpp0074693 pep:known chromosome:BDGP5:3L:19806870:19809038:-1 ... 147 3e-38 FBpp0081483 pep:known chromosome:BDGP5:3R:4842492:4845739:-1 ge... 144 2e-36 FBpp0297169 pep:known chromosome:BDGP5:3R:12200148:12229412:-1 ... 132 4e-32 FBpp0297168 pep:known chromosome:BDGP5:3R:12200148:12229412:-1 ... 132 4e-32 FBpp0082768 pep:known chromosome:BDGP5:3R:12200156:12229405:-1 ... 131 8e-32 FBpp0082179 pep:known chromosome:BDGP5:3R:8883481:8903950:1 gen... 103 7e-23 FBpp0082178 pep:known chromosome:BDGP5:3R:8898124:8903950:1 gen... 103 7e-23 FBpp0084931 pep:known chromosome:BDGP5:3R:25884037:25947101:1 g... 103 1e-22 FBpp0113089 pep:known chromosome:BDGP5:3R:25884037:25947101:1 g... 97.8 1e-21 FBpp0304154 pep:known chromosome:BDGP5:X:15193042:15213107:1 ge... 93.2 2e-19 FBpp0304153 pep:known chromosome:BDGP5:X:15199622:15213107:1 ge... 93.2 2e-19 FBpp0301991 pep:known chromosome:BDGP5:X:15191798:15213107:1 ge... 93.2 2e-19 FBpp0292297 pep:known chromosome:BDGP5:X:15194542:15213107:1 ge... 93.2 2e-19 FBpp0292296 pep:known chromosome:BDGP5:X:15193042:15213107:1 ge... 93.2 2e-19 FBpp0301992 pep:known chromosome:BDGP5:X:15191798:15213107:1 ge... 92.4 3e-19 FBpp0304590 pep:known chromosome:BDGP5:X:2579613:2586813:1 gene... 80.1 3e-15 FBpp0070455 pep:known chromosome:BDGP5:X:2579613:2586813:1 gene... 80.1 3e-15 FBpp0293064 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene... 75.5 6e-14 FBpp0293065 pep:known chromosome:BDGP5:3L:366524:392633:-1 gene... 75.1 9e-14 FBpp0073368 pep:known chromosome:BDGP5:X:11510159:11513981:1 ge... 57.8 2e-08 FBpp0293063 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene... 57.8 2e-08 FBpp0303180 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene... 57.8 2e-08 FBpp0306033 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene... 57.8 2e-08 FBpp0306032 pep:known chromosome:BDGP5:3L:366524:392633:-1 gene... 57.8 2e-08 FBpp0303179 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene... 57.8 2e-08 FBpp0289845 pep:known chromosome:BDGP5:3R:21902314:21924433:-1 ... 53.9 3e-07 FBpp0112206 pep:known chromosome:BDGP5:3R:21902314:21924433:-1 ... 53.9 4e-07 FBpp0112205 pep:known chromosome:BDGP5:3R:21902314:21923774:-1 ... 53.5 4e-07 FBpp0087945 pep:known chromosome:BDGP5:2R:3882941:3886078:-1 ge... 40.4 0.004 FBpp0298330 pep:known chromosome:BDGP5:4:1219484:1228244:1 gene... 33.1 0.80 FBpp0298328 pep:known chromosome:BDGP5:4:1219484:1227065:1 gene... 33.1 0.85 FBpp0298327 pep:known chromosome:BDGP5:4:1219484:1228193:1 gene... 33.1 0.85 FBpp0298329 pep:known chromosome:BDGP5:4:1222766:1227176:1 gene... 33.1 0.91 FBpp0111448 pep:known chromosome:BDGP5:X:22274648:22277203:1 ge... 32.3 1.5 FBpp0087879 pep:known chromosome:BDGP5:2R:4116476:4119832:-1 ge... 31.6 2.4 FBpp0099504 pep:known chromosome:BDGP5:3L:8668859:8672353:1 gen... 30.8 3.6 FBpp0076296 pep:known chromosome:BDGP5:3L:8669055:8672353:1 gen... 30.8 3.6 > FBpp0076500 pep:known chromosome:BDGP5:3L:7757071:7768703:-1 gene:FBgn0023076 transcript:FBtr0076785 description:"Clock" Length=1023 Score = 455 bits (1170), Expect = 4e-147, Method: Compositional matrix adjust. Identities = 213/382 (56%), Positives = 288/382 (75%), Gaps = 22/382 (6%) Query 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITVRSRA 70 TKR++RNLSEKKRRDQFN LVN+L +++ST++RKMDKSTVLKSTI+FLKNHNE T RS+ Sbjct 11 TKRKSRNLSEKKRRDQFNSLVNDLSALISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKV 70 Query 71 HDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKS 130 ++Q+DWKPAFLSN+E+T+L+LE+L+GF+MVFS+ G I+Y SES+TS LG+ P D+ N + Sbjct 71 FEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQDLYNMT 130 Query 131 IFDLAFVDDRPNLYNILQNGG-TLDPTQV-VTTDNPISFRCRLQRGTLDFRDEVTYELVQ 188 I+DLA+ D L NI N ++P Q +++ N I+F L+RG ++ D YELV+ Sbjct 131 IYDLAYEMDHEALLNIFMNPTPVIEPRQTDISSSNQITFYTHLRRGGMEKVDANAYELVK 190 Query 189 FDGHFRKN----------LESNENGHHSY---------QDEHESRLLFVCTGRLYMPQLV 229 F G+FR + + + NG + E + +L+FV TGR+ PQL+ Sbjct 191 FVGYFRNDTNTSTGSSSEVSNGSNGQPAVLPRIFQQNPNAEVDKKLVFVGTGRVQNPQLI 250 Query 230 RDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVS 289 R++S++D +EFTS+HS+EWKFLFLDHRAPPIIGY+PFEVLGTSGYDYYHFDDL+ +V+ Sbjct 251 REMSIIDPTSNEFTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVA 310 Query 290 CHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIK 349 CHE L Q GE SCYYRFLTKGQQWIWLQT +Y++YHQ+NSKP++VVCTH+VVSYA+++K Sbjct 311 CHEELRQTGEGKSCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLK 370 Query 350 STKQERTETEESVRDCDHNGSS 371 +++E ++ S +NGSS Sbjct 371 DSRKEGQKSGNS-NSITNNGSS 391 Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/112 (37%), Positives = 59/112 (53%), Gaps = 20/112 (18%) Query 471 RLPEPA--LVPQHGIGAQYLEPAPYVGAVGV-PAVLPLS----LPPIPV----------- 512 + P+PA L + +LEP Y+ A+ + P + P L P+PV Sbjct 597 QFPQPAYPLASPQLVAPTFLEPPQYLTAIPMQPVIAPFPVAPVLSPLPVQSQTDMLPDTV 656 Query 513 --IVAQDQAQLQLQRTHRELQQMIVRQQEELRQVKEQLLFARLGILQPVINV 562 Q Q Q QLQR H ELQ++I++QQ ELR V EQLL +R LQP++++ Sbjct 657 VMTPTQSQLQDQLQRKHDELQKLILQQQNELRIVSEQLLLSRYTYLQPMMSM 708 > FBpp0099478 pep:known chromosome:BDGP5:3L:7757071:7768703:-1 gene:FBgn0023076 transcript:FBtr0100132 description:"Clock" Length=1027 Score = 451 bits (1160), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 211/380 (56%), Positives = 286/380 (75%), Gaps = 22/380 (6%) Query 13 RRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITVRSRAHD 72 R++RNLSEKKRRDQFN LVN+L +++ST++RKMDKSTVLKSTI+FLKNHNE T RS+ + Sbjct 17 RKSRNLSEKKRRDQFNSLVNDLSALISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFE 76 Query 73 VQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIF 132 +Q+DWKPAFLSN+E+T+L+LE+L+GF+MVFS+ G I+Y SES+TS LG+ P D+ N +I+ Sbjct 77 IQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQDLYNMTIY 136 Query 133 DLAFVDDRPNLYNILQNGG-TLDPTQV-VTTDNPISFRCRLQRGTLDFRDEVTYELVQFD 190 DLA+ D L NI N ++P Q +++ N I+F L+RG ++ D YELV+F Sbjct 137 DLAYEMDHEALLNIFMNPTPVIEPRQTDISSSNQITFYTHLRRGGMEKVDANAYELVKFV 196 Query 191 GHFRKN----------LESNENGHHSY---------QDEHESRLLFVCTGRLYMPQLVRD 231 G+FR + + + NG + E + +L+FV TGR+ PQL+R+ Sbjct 197 GYFRNDTNTSTGSSSEVSNGSNGQPAVLPRIFQQNPNAEVDKKLVFVGTGRVQNPQLIRE 256 Query 232 VSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 +S++D +EFTS+HS+EWKFLFLDHRAPPIIGY+PFEVLGTSGYDYYHFDDL+ +V+CH Sbjct 257 MSIIDPTSNEFTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACH 316 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKST 351 E L Q GE SCYYRFLTKGQQWIWLQT +Y++YHQ+NSKP++VVCTH+VVSYA+++K + Sbjct 317 EELRQTGEGKSCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDS 376 Query 352 KQERTETEESVRDCDHNGSS 371 ++E ++ S +NGSS Sbjct 377 RKEGQKSGNS-NSITNNGSS 395 Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/112 (37%), Positives = 59/112 (53%), Gaps = 20/112 (18%) Query 471 RLPEPA--LVPQHGIGAQYLEPAPYVGAVGV-PAVLPLS----LPPIPV----------- 512 + P+PA L + +LEP Y+ A+ + P + P L P+PV Sbjct 601 QFPQPAYPLASPQLVAPTFLEPPQYLTAIPMQPVIAPFPVAPVLSPLPVQSQTDMLPDTV 660 Query 513 --IVAQDQAQLQLQRTHRELQQMIVRQQEELRQVKEQLLFARLGILQPVINV 562 Q Q Q QLQR H ELQ++I++QQ ELR V EQLL +R LQP++++ Sbjct 661 VMTPTQSQLQDQLQRKHDELQKLILQQQNELRIVSEQLLLSRYTYLQPMMSM 712 > FBpp0099480 pep:known chromosome:BDGP5:3L:7757071:7768703:-1 gene:FBgn0023076 transcript:FBtr0100134 description:"Clock" Length=961 Score = 367 bits (942), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 171/328 (52%), Positives = 237/328 (72%), Gaps = 22/328 (7%) Query 65 TVRSRAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPG 124 T RS+ ++Q+DWKPAFLSN+E+T+L+LE+L+GF+MVFS+ G I+Y SES+TS LG+ P Sbjct 3 TDRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQ 62 Query 125 DIINKSIFDLAFVDDRPNLYNILQNGG-TLDPTQV-VTTDNPISFRCRLQRGTLDFRDEV 182 D+ N +I+DLA+ D L NI N ++P Q +++ N I+F L+RG ++ D Sbjct 63 DLYNMTIYDLAYEMDHEALLNIFMNPTPVIEPRQTDISSSNQITFYTHLRRGGMEKVDAN 122 Query 183 TYELVQFDGHFRKN----------LESNENGHHSY---------QDEHESRLLFVCTGRL 223 YELV+F G+FR + + + NG + E + +L+FV TGR+ Sbjct 123 AYELVKFVGYFRNDTNTSTGSSSEVSNGSNGQPAVLPRIFQQNPNAEVDKKLVFVGTGRV 182 Query 224 YMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDD 283 PQL+R++S++D +EFTS+HS+EWKFLFLDHRAPPIIGY+PFEVLGTSGYDYYHFDD Sbjct 183 QNPQLIREMSIIDPTSNEFTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDD 242 Query 284 LEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 L+ +V+CHE L Q GE SCYYRFLTKGQQWIWLQT +Y++YHQ+NSKP++VVCTH+VVS Sbjct 243 LDSIVACHEELRQTGEGKSCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHKVVS 302 Query 344 YADIIKSTKQERTETEESVRDCDHNGSS 371 YA+++K +++E ++ S +NGSS Sbjct 303 YAEVLKDSRKEGQKSGNS-NSITNNGSS 329 Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/112 (37%), Positives = 59/112 (53%), Gaps = 20/112 (18%) Query 471 RLPEPA--LVPQHGIGAQYLEPAPYVGAVGV-PAVLPLS----LPPIPV----------- 512 + P+PA L + +LEP Y+ A+ + P + P L P+PV Sbjct 535 QFPQPAYPLASPQLVAPTFLEPPQYLTAIPMQPVIAPFPVAPVLSPLPVQSQTDMLPDTV 594 Query 513 --IVAQDQAQLQLQRTHRELQQMIVRQQEELRQVKEQLLFARLGILQPVINV 562 Q Q Q QLQR H ELQ++I++QQ ELR V EQLL +R LQP++++ Sbjct 595 VMTPTQSQLQDQLQRKHDELQKLILQQQNELRIVSEQLLLSRYTYLQPMMSM 646 > FBpp0074693 pep:known chromosome:BDGP5:3L:19806870:19809038:-1 gene:FBgn0023094 transcript:FBtr0074924 description:"cycle" Length=413 Score = 147 bits (370), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 116/392 (30%), Positives = 192/392 (49%), Gaps = 67/392 (17%) Query 9 DDTKRRTRNLSEKKRRDQFNMLVNELGSMVS---TNNRKMDKSTVLKSTISFLKNHNEIT 65 D+ +++ + EK+RRD+ N +NEL SM+ RK+DK TVL+ + L+ I Sbjct 28 DENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRG---IR 84 Query 66 VRSRAHDVQ-EDWKPAFLSNEEFTYLVLEALEGFVMVFSAS-GCIYYVSESVTSLLGHTP 123 H D++P+FLS++E ++L+A EGF+ V G I YVS+SV+S+L T Sbjct 85 GSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQ 144 Query 124 GDIINKSIFDLAFVDD----RPNLYNILQ-------NGGTLDPTQVVTTDNP-------- 164 D++ +S FD+ D + L ++ Q + T+ P V TD P Sbjct 145 ADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLP---VKTDVPQSLCRLCP 201 Query 165 ---ISFRCRLQRGTLD---FRDEV--------------------TYELVQFDGHFRKNLE 198 SF CR++ T ++E Y ++Q G+ + Sbjct 202 GARRSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTP 261 Query 199 SNENGHHSYQDEHESRL-LFVCTGRLYMPQLVRDVSLVDTIRSE-------FTSRHSLEW 250 + + DE + L V GR+ P VR+ ++ ++ + F SRHS E Sbjct 262 IKDEDQDADSDEQTTNLSCLVAIGRI--PPNVRNSTVPASLDNHPNIRHVLFISRHSGEG 319 Query 251 KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGE-LTSCYYRFLT 309 KFLF+D RA +IG+LP E+LGTS Y+Y+H +D+ ++ H+ +MQ E +T+ YRF Sbjct 320 KFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRC 379 Query 310 KGQQWIWLQTRFYITYHQWNSKPEFVVCTHRV 341 K +I LQ+ + + W S+ ++++ + V Sbjct 380 KDNSYIQLQSEWRAFKNPWTSEIDYIIAKNSV 411 > FBpp0081483 pep:known chromosome:BDGP5:3R:4842492:4845739:-1 gene:FBgn0264075 transcript:FBtr0082005 description:"tango" Length=642 Score = 144 bits (364), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/368 (29%), Positives = 176/368 (48%), Gaps = 54/368 (15%) Query 20 EKKRRDQFNMLVNELGSMVSTNN---RKMDKSTVLKSTISFLKNHNEITVRSRAHDVQED 76 E++RR++ + EL MV T + RK DK T+L+ ++ +K +R + + Sbjct 22 ERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMK-----ALRGTGNTSSDG 76 Query 77 -WKPAFLSNEEFTYLVLEALEGFVMVFSA-SGCIYYVSESVTSLLGHTPGDIINKSIFDL 134 +KP+FL+++E +L+LEA +GF+ V S SG + YVS+SVT +L +T D S+++ Sbjct 77 TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTSLYEH 136 Query 135 AFVDDRPNLYNIL-----QNGGTL-------------DPTQVVTTDNPISFRCRLQRGTL 176 DDR + L QN G + + ++ F CR++ G + Sbjct 137 IHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRGFICRMRVGNV 196 Query 177 D--------------------FRDEVTYELVQFDGHFRKNLESNE---NGHHSYQ-DEHE 212 + RD Y +V G+ KN + N H D+ Sbjct 197 NPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYI-KNWPPTDMFPNMHMERDVDDMS 255 Query 213 SRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLG 272 S V GRL + + +SEF +RH+++ KF F+D R I+GY P E+LG Sbjct 256 SHCCLVAIGRLQVTSTAANDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLG 315 Query 273 TSGYDYYHFDDLEKVV-SCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSK 331 YD++H +D + S + L QKG++ S YR K +++WL+T+ Y + + + Sbjct 316 KICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYTDE 375 Query 332 PEFVVCTH 339 E++VCT+ Sbjct 376 VEYIVCTN 383 > FBpp0297169 pep:known chromosome:BDGP5:3R:12200148:12229412:-1 gene:FBgn0003513 transcript:FBtr0306027 description:"spineless" Length=1015 Score = 132 bits (333), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/362 (26%), Positives = 165/362 (46%), Gaps = 59/362 (16%) Query 15 TRNLSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTISFL------------- 58 T++ K+ R++ N ++ L S++ K+D+ ++L+ ++S+L Sbjct 29 TKSNPSKRHRERLNAELDLLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVVMHKD 88 Query 59 KNHNEITVRSRAHDVQED-----WKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSE 113 K N + AHD ++ L + F L+AL GF+M+ + G +++ + Sbjct 89 KEDNGVLPHIHAHDGYRTRELGAFEHGLLDGDMF----LQALNGFLMILTCEGEVFFATH 144 Query 114 SVTSLLGHTPGDIINKSIFDLAFVDDR-------------PNLYNILQNGGTLDPTQVVT 160 S+ S LG DI+++S+++L +DR P + +Q TL P + + Sbjct 145 SIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQLAETLAPDKALY 204 Query 161 TDNP--ISFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFV 218 + + FRC L + R ++ + G RK +E L Sbjct 205 LERSFTVRFRCLLDNTSGFLRLDIRGRIKVLHGQNRKT------------EEPPLALFAY 252 Query 219 CTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDY 278 CT + P + ++ + + F S+H L++ + +D R I+GY E++ GYD Sbjct 253 CTP--FGPPSLLEIPHKENM---FKSKHKLDFSLVSMDQRGKHILGYADAELVNMGGYDL 307 Query 279 YHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCT 338 H+DDL V S H+ L++ G YR+ K +W WLQT + Y NSKP+FV+CT Sbjct 308 VHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSSRLVYK--NSKPDFVICT 365 Query 339 HR 340 HR Sbjct 366 HR 367 > FBpp0297168 pep:known chromosome:BDGP5:3R:12200148:12229412:-1 gene:FBgn0003513 transcript:FBtr0306026 description:"spineless" Length=1015 Score = 132 bits (333), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/362 (26%), Positives = 165/362 (46%), Gaps = 59/362 (16%) Query 15 TRNLSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTISFL------------- 58 T++ K+ R++ N ++ L S++ K+D+ ++L+ ++S+L Sbjct 29 TKSNPSKRHRERLNAELDLLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVVMHKD 88 Query 59 KNHNEITVRSRAHDVQED-----WKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSE 113 K N + AHD ++ L + F L+AL GF+M+ + G +++ + Sbjct 89 KEDNGVLPHIHAHDGYRTRELGAFEHGLLDGDMF----LQALNGFLMILTCEGEVFFATH 144 Query 114 SVTSLLGHTPGDIINKSIFDLAFVDDR-------------PNLYNILQNGGTLDPTQVVT 160 S+ S LG DI+++S+++L +DR P + +Q TL P + + Sbjct 145 SIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQLAETLAPDKALY 204 Query 161 TDNP--ISFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFV 218 + + FRC L + R ++ + G RK +E L Sbjct 205 LERSFTVRFRCLLDNTSGFLRLDIRGRIKVLHGQNRKT------------EEPPLALFAY 252 Query 219 CTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDY 278 CT + P + ++ + + F S+H L++ + +D R I+GY E++ GYD Sbjct 253 CTP--FGPPSLLEIPHKENM---FKSKHKLDFSLVSMDQRGKHILGYADAELVNMGGYDL 307 Query 279 YHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCT 338 H+DDL V S H+ L++ G YR+ K +W WLQT + Y NSKP+FV+CT Sbjct 308 VHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSSRLVYK--NSKPDFVICT 365 Query 339 HR 340 HR Sbjct 366 HR 367 > FBpp0082768 pep:known chromosome:BDGP5:3R:12200156:12229405:-1 gene:FBgn0003513 transcript:FBtr0083318 description:"spineless" Length=884 Score = 131 bits (330), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 94/362 (26%), Positives = 165/362 (46%), Gaps = 59/362 (16%) Query 15 TRNLSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTISFL------------- 58 T++ K+ R++ N ++ L S++ K+D+ ++L+ ++S+L Sbjct 29 TKSNPSKRHRERLNAELDLLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVVMHKD 88 Query 59 KNHNEITVRSRAHDVQED-----WKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSE 113 K N + AHD ++ L + F L+AL GF+M+ + G +++ + Sbjct 89 KEDNGVLPHIHAHDGYRTRELGAFEHGLLDGDMF----LQALNGFLMILTCEGEVFFATH 144 Query 114 SVTSLLGHTPGDIINKSIFDLAFVDDR-------------PNLYNILQNGGTLDPTQVVT 160 S+ S LG DI+++S+++L +DR P + +Q TL P + + Sbjct 145 SIESYLGFHQSDIVHQSVYELVHSEDREELQRQLLWNSFLPADMSSMQLAETLAPDKALY 204 Query 161 TDNP--ISFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFV 218 + + FRC L + R ++ + G RK +E L Sbjct 205 LERSFTVRFRCLLDNTSGFLRLDIRGRIKVLHGQNRKT------------EEPPLALFAY 252 Query 219 CTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDY 278 CT + P + ++ + + F S+H L++ + +D R I+GY E++ GYD Sbjct 253 CTP--FGPPSLLEIPHKENM---FKSKHKLDFSLVSMDQRGKHILGYADAELVNMGGYDL 307 Query 279 YHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCT 338 H+DDL V S H+ L++ G YR+ K +W WLQT + Y NSKP+FV+CT Sbjct 308 VHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSSRLVYK--NSKPDFVICT 365 Query 339 HR 340 HR Sbjct 366 HR 367 > FBpp0082179 pep:known chromosome:BDGP5:3R:8883481:8903950:1 gene:FBgn0004666 transcript:FBtr0082711 description:"single-minded" Length=664 Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 93/370 (25%), Positives = 170/370 (46%), Gaps = 44/370 (12%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITVRS 68 K +++N + + RR++ N EL ++ + ++DK++V++ T S+LK +R Sbjct 2 KEKSKN-AARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLK------MRQ 54 Query 69 RAHD-VQEDW--KPAF---LSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHT 122 D + E W PA + +E +L+ L+GF+ V + G I Y+SE+ + LG + Sbjct 55 VFPDGLGEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLS 114 Query 123 PGDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQ--------RG 174 ++ SIF+ D+ + IL ++ + T PI +Q RG Sbjct 115 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 174 Query 175 TLDFRDEVTYELVQFDGHFRKNLESNENG----HHS-------YQDEHESR------LLF 217 + E T+ L ++N +G H S Y D + + L Sbjct 175 SHTIEIEKTFFLRMKCVLAKRNAGLTTSGFKVIHCSGYLKARIYPDRGDGQGSLIQNLGL 234 Query 218 VCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYD 277 V G + ++ L + F R L+ K +F D R + GY P +++ + Y Sbjct 235 VAVGHSLPSSAITEIKLHQNM---FMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 291 Query 278 YYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVC 337 Y H D+ + H+ L+ KG++T+ YYRFLTKG W+W+Q+ + ++ +S+ F+V Sbjct 292 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 351 Query 338 THRVVSYADI 347 + V+S ++ Sbjct 352 VNYVLSEREV 361 > FBpp0082178 pep:known chromosome:BDGP5:3R:8898124:8903950:1 gene:FBgn0004666 transcript:FBtr0082710 description:"single-minded" Length=688 Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 93/370 (25%), Positives = 170/370 (46%), Gaps = 44/370 (12%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITVRS 68 K +++N + + RR++ N EL ++ + ++DK++V++ T S+LK +R Sbjct 26 KEKSKN-AARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLK------MRQ 78 Query 69 RAHD-VQEDW--KPAF---LSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHT 122 D + E W PA + +E +L+ L+GF+ V + G I Y+SE+ + LG + Sbjct 79 VFPDGLGEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLS 138 Query 123 PGDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQ--------RG 174 ++ SIF+ D+ + IL ++ + T PI +Q RG Sbjct 139 QVELTGNSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRG 198 Query 175 TLDFRDEVTYELVQFDGHFRKNLESNENG----HHS-------YQDEHESR------LLF 217 + E T+ L ++N +G H S Y D + + L Sbjct 199 SHTIEIEKTFFLRMKCVLAKRNAGLTTSGFKVIHCSGYLKARIYPDRGDGQGSLIQNLGL 258 Query 218 VCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYD 277 V G + ++ L + F R L+ K +F D R + GY P +++ + Y Sbjct 259 VAVGHSLPSSAITEIKLHQNM---FMFRAKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQ 315 Query 278 YYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVC 337 Y H D+ + H+ L+ KG++T+ YYRFLTKG W+W+Q+ + ++ +S+ F+V Sbjct 316 YIHAADIMAMRCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVFIVS 375 Query 338 THRVVSYADI 347 + V+S ++ Sbjct 376 VNYVLSEREV 385 > FBpp0084931 pep:known chromosome:BDGP5:3R:25884037:25947101:1 gene:FBgn0015542 transcript:FBtr0085565 description:"similar" Length=1507 Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 90/367 (25%), Positives = 173/367 (47%), Gaps = 55/367 (15%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEI---- 64 K ++R+ + +R + + + EL + + + + ++DK++V++ TI+FLK + Sbjct 74 KEKSRDAARCRRSKETEIFM-ELSAALPLKTDDVNQLDKASVMRITIAFLKIREMLQFVP 132 Query 65 TVRSRAHDVQEDWKPA----------------FLSNEEFTYLVLEALEGFVMVFSASGCI 108 ++R D+++D + A +L+ E L+ + ++GF++V S G I Sbjct 133 SLRDCNDDIKQDIETAEDQQEVKPKLEVGTEDWLNGAEARELLKQTMDGFLLVLSHEGDI 192 Query 109 YYVSESVTSLLGHTPGDIINKSIF------DLAFVDDRPNLYNILQNGGTLDPTQ--VVT 160 YVSE+V LG T D + + I+ D A + + +L L +P Q V+ Sbjct 193 TYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVS 252 Query 161 T---DNPISFRCRL-QRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLL 216 T D + +C L RG +Y+++ GH N + RLL Sbjct 253 THHRDLFVRLKCTLTSRGRSINIKSASYKVIHITGHLVVNAKGE-------------RLL 299 Query 217 FVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGY 276 + P + + S F ++HSL+ +F ++D + ++GY P ++L TS + Sbjct 300 MAIGRPIPHPSNIE----IPLGTSTFLTKHSLDMRFTYVDDKMHDLLGYSPKDLLDTSLF 355 Query 277 DYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVV 336 H D E++++ ++++ KG+ + YRFL K + W+ ++ I Y + KP+ VV Sbjct 356 SCQHGADSERLMATFKSVLSKGQGETSRYRFLGKYGGYCWILSQATIVYDKL--KPQSVV 413 Query 337 CTHRVVS 343 C + V+S Sbjct 414 CVNYVIS 420 > FBpp0113089 pep:known chromosome:BDGP5:3R:25884037:25947101:1 gene:FBgn0015542 transcript:FBtr0114597 description:"similar" Length=426 Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 89/366 (24%), Positives = 171/366 (47%), Gaps = 55/366 (15%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEI---- 64 K ++R+ + + RR + + EL + + + + ++DK++V++ TI+FLK + Sbjct 74 KEKSRD-AARCRRSKETEIFMELSAALPLKTDDVNQLDKASVMRITIAFLKIREMLQFVP 132 Query 65 TVRSRAHDVQEDWKPA----------------FLSNEEFTYLVLEALEGFVMVFSASGCI 108 ++R D+++D + A +L+ E L+ + ++GF++V S G I Sbjct 133 SLRDCNDDIKQDIETAEDQQEVKPKLEVGTEDWLNGAEARELLKQTMDGFLLVLSHEGDI 192 Query 109 YYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQNGGTL------DPTQ--VVT 160 YVSE+V LG T D + + I++ + D + L L +P Q V+ Sbjct 193 TYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVS 252 Query 161 T---DNPISFRCRL-QRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLL 216 T D + +C L RG +Y+++ GH N + RLL Sbjct 253 THHRDLFVRLKCTLTSRGRSINIKSASYKVIHITGHLVVNAKGE-------------RLL 299 Query 217 FVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGY 276 + P + + S F ++HSL+ +F ++D + ++GY P ++L TS + Sbjct 300 MAIGRPIPHPSNIE----IPLGTSTFLTKHSLDMRFTYVDDKMHDLLGYSPKDLLDTSLF 355 Query 277 DYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVV 336 H D E++++ ++++ KG+ + YRFL K + W+ ++ I Y + KP+ VV Sbjct 356 SCQHGADSERLMATFKSVLSKGQGETSRYRFLGKYGGYCWILSQATIVYDKL--KPQSVV 413 Query 337 CTHRVV 342 C + V+ Sbjct 414 CVNYVI 419 > FBpp0304154 pep:known chromosome:BDGP5:X:15193042:15213107:1 gene:FBgn0261703 transcript:FBtr0331766 description:"germ cell-expressed bHLH-PAS" Length=959 Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/385 (24%), Positives = 161/385 (42%), Gaps = 71/385 (18%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 ++ R RN +EK RRD+ N + EL +MV + + R++DK+ VL+ L+ Sbjct 276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR------- 328 Query 67 RSRAHDVQEDWKPAFLSNE-EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 ++ + + + + T +++ L+ F + + G I +S S+ LGH D Sbjct 329 ------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382 Query 126 IINKSIFDLAFVDDR---------PNLYNILQNGGTLD----PTQVVTTDNPI------- 165 + +SI + +D+ L N+ G D P Q + Sbjct 383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRE 442 Query 166 ---SFRCRLQRGTLDFRDEVT-YELVQFDGHFRKNLESNE---NGHHSYQDEHESR---- 214 SFR RL R R E T YE+V+ DG FR++ E+ + H S + R Sbjct 443 DRRSFRVRLARAGP--RSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR 500 Query 215 -------------LLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPP 261 ++ R+ P + L+D E+ +RH ++ + + D R Sbjct 501 DDVIPLHTISGNDIILTGCARIIRPPKIAS-RLIDANTLEYKTRHLIDGRIIDCDQRIGI 559 Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCY----YRFLTKGQQWIWL 317 + GY+ EV S + + H DD+ V+ AL Q + S Y YR T+ I+L Sbjct 560 VAGYMTDEVRNLSPFTFMHNDDVRWVIV---ALRQMYDCNSSYGESTYRLFTRNGNIIYL 616 Query 318 QTRFYITYHQWNSKPEFVVCTHRVV 342 Q++ Y+ + +K VC + ++ Sbjct 617 QSKGYLEIDKETNKVHSFVCVNTLL 641 > FBpp0304153 pep:known chromosome:BDGP5:X:15199622:15213107:1 gene:FBgn0261703 transcript:FBtr0331765 description:"germ cell-expressed bHLH-PAS" Length=959 Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/385 (24%), Positives = 161/385 (42%), Gaps = 71/385 (18%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 ++ R RN +EK RRD+ N + EL +MV + + R++DK+ VL+ L+ Sbjct 276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR------- 328 Query 67 RSRAHDVQEDWKPAFLSNE-EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 ++ + + + + T +++ L+ F + + G I +S S+ LGH D Sbjct 329 ------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382 Query 126 IINKSIFDLAFVDDR---------PNLYNILQNGGTLD----PTQVVTTDNPI------- 165 + +SI + +D+ L N+ G D P Q + Sbjct 383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRE 442 Query 166 ---SFRCRLQRGTLDFRDEVT-YELVQFDGHFRKNLESNE---NGHHSYQDEHESR---- 214 SFR RL R R E T YE+V+ DG FR++ E+ + H S + R Sbjct 443 DRRSFRVRLARAGP--RSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR 500 Query 215 -------------LLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPP 261 ++ R+ P + L+D E+ +RH ++ + + D R Sbjct 501 DDVIPLHTISGNDIILTGCARIIRPPKIAS-RLIDANTLEYKTRHLIDGRIIDCDQRIGI 559 Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCY----YRFLTKGQQWIWL 317 + GY+ EV S + + H DD+ V+ AL Q + S Y YR T+ I+L Sbjct 560 VAGYMTDEVRNLSPFTFMHNDDVRWVIV---ALRQMYDCNSSYGESTYRLFTRNGNIIYL 616 Query 318 QTRFYITYHQWNSKPEFVVCTHRVV 342 Q++ Y+ + +K VC + ++ Sbjct 617 QSKGYLEIDKETNKVHSFVCVNTLL 641 > FBpp0301991 pep:known chromosome:BDGP5:X:15191798:15213107:1 gene:FBgn0261703 transcript:FBtr0310308 description:"germ cell-expressed bHLH-PAS" Length=959 Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/385 (24%), Positives = 161/385 (42%), Gaps = 71/385 (18%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 ++ R RN +EK RRD+ N + EL +MV + + R++DK+ VL+ L+ Sbjct 276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR------- 328 Query 67 RSRAHDVQEDWKPAFLSNE-EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 ++ + + + + T +++ L+ F + + G I +S S+ LGH D Sbjct 329 ------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382 Query 126 IINKSIFDLAFVDDR---------PNLYNILQNGGTLD----PTQVVTTDNPI------- 165 + +SI + +D+ L N+ G D P Q + Sbjct 383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRE 442 Query 166 ---SFRCRLQRGTLDFRDEVT-YELVQFDGHFRKNLESNE---NGHHSYQDEHESR---- 214 SFR RL R R E T YE+V+ DG FR++ E+ + H S + R Sbjct 443 DRRSFRVRLARAGP--RSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR 500 Query 215 -------------LLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPP 261 ++ R+ P + L+D E+ +RH ++ + + D R Sbjct 501 DDVIPLHTISGNDIILTGCARIIRPPKIAS-RLIDANTLEYKTRHLIDGRIIDCDQRIGI 559 Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCY----YRFLTKGQQWIWL 317 + GY+ EV S + + H DD+ V+ AL Q + S Y YR T+ I+L Sbjct 560 VAGYMTDEVRNLSPFTFMHNDDVRWVIV---ALRQMYDCNSSYGESTYRLFTRNGNIIYL 616 Query 318 QTRFYITYHQWNSKPEFVVCTHRVV 342 Q++ Y+ + +K VC + ++ Sbjct 617 QSKGYLEIDKETNKVHSFVCVNTLL 641 > FBpp0292297 pep:known chromosome:BDGP5:X:15194542:15213107:1 gene:FBgn0261703 transcript:FBtr0303199 description:"germ cell-expressed bHLH-PAS" Length=959 Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/385 (24%), Positives = 161/385 (42%), Gaps = 71/385 (18%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 ++ R RN +EK RRD+ N + EL +MV + + R++DK+ VL+ L+ Sbjct 276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR------- 328 Query 67 RSRAHDVQEDWKPAFLSNE-EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 ++ + + + + T +++ L+ F + + G I +S S+ LGH D Sbjct 329 ------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382 Query 126 IINKSIFDLAFVDDR---------PNLYNILQNGGTLD----PTQVVTTDNPI------- 165 + +SI + +D+ L N+ G D P Q + Sbjct 383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRE 442 Query 166 ---SFRCRLQRGTLDFRDEVT-YELVQFDGHFRKNLESNE---NGHHSYQDEHESR---- 214 SFR RL R R E T YE+V+ DG FR++ E+ + H S + R Sbjct 443 DRRSFRVRLARAGP--RSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR 500 Query 215 -------------LLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPP 261 ++ R+ P + L+D E+ +RH ++ + + D R Sbjct 501 DDVIPLHTISGNDIILTGCARIIRPPKIAS-RLIDANTLEYKTRHLIDGRIIDCDQRIGI 559 Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCY----YRFLTKGQQWIWL 317 + GY+ EV S + + H DD+ V+ AL Q + S Y YR T+ I+L Sbjct 560 VAGYMTDEVRNLSPFTFMHNDDVRWVIV---ALRQMYDCNSSYGESTYRLFTRNGNIIYL 616 Query 318 QTRFYITYHQWNSKPEFVVCTHRVV 342 Q++ Y+ + +K VC + ++ Sbjct 617 QSKGYLEIDKETNKVHSFVCVNTLL 641 > FBpp0292296 pep:known chromosome:BDGP5:X:15193042:15213107:1 gene:FBgn0261703 transcript:FBtr0303198 description:"germ cell-expressed bHLH-PAS" Length=959 Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 92/385 (24%), Positives = 161/385 (42%), Gaps = 71/385 (18%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 ++ R RN +EK RRD+ N + EL +MV + + R++DK+ VL+ L+ Sbjct 276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR------- 328 Query 67 RSRAHDVQEDWKPAFLSNE-EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 ++ + + + + T +++ L+ F + + G I +S S+ LGH D Sbjct 329 ------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382 Query 126 IINKSIFDLAFVDDR---------PNLYNILQNGGTLD----PTQVVTTDNPI------- 165 + +SI + +D+ L N+ G D P Q + Sbjct 383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRE 442 Query 166 ---SFRCRLQRGTLDFRDEVT-YELVQFDGHFRKNLESNE---NGHHSYQDEHESR---- 214 SFR RL R R E T YE+V+ DG FR++ E+ + H S + R Sbjct 443 DRRSFRVRLARAGP--RSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR 500 Query 215 -------------LLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPP 261 ++ R+ P + L+D E+ +RH ++ + + D R Sbjct 501 DDVIPLHTISGNDIILTGCARIIRPPKIAS-RLIDANTLEYKTRHLIDGRIIDCDQRIGI 559 Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCY----YRFLTKGQQWIWL 317 + GY+ EV S + + H DD+ V+ AL Q + S Y YR T+ I+L Sbjct 560 VAGYMTDEVRNLSPFTFMHNDDVRWVIV---ALRQMYDCNSSYGESTYRLFTRNGNIIYL 616 Query 318 QTRFYITYHQWNSKPEFVVCTHRVV 342 Q++ Y+ + +K VC + ++ Sbjct 617 QSKGYLEIDKETNKVHSFVCVNTLL 641 > FBpp0301992 pep:known chromosome:BDGP5:X:15191798:15213107:1 gene:FBgn0261703 transcript:FBtr0310309 description:"germ cell-expressed bHLH-PAS" Length=918 Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 92/385 (24%), Positives = 161/385 (42%), Gaps = 71/385 (18%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITV 66 ++ R RN +EK RRD+ N + EL +MV + + R++DK+ VL+ L+ Sbjct 276 NSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESPRRVDKTAVLRFAAHALR------- 328 Query 67 RSRAHDVQEDWKPAFLSNE-EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGD 125 ++ + + + + T +++ L+ F + + G I +S S+ LGH D Sbjct 329 ------LKHAFGNSLMQQRPQITDTLMDMLDSFFLTLTCHGHILLISASIEQHLGHCQSD 382 Query 126 IINKSIFDLAFVDDR---------PNLYNILQNGGTLD----PTQVVTTDNPI------- 165 + +SI + +D+ L N+ G D P Q + Sbjct 383 LYGQSIMQITHPEDQNMLKQQLIPTELENLFDAHGDSDAEGEPRQRSKAEEDAIDRKLRE 442 Query 166 ---SFRCRLQRGTLDFRDEVT-YELVQFDGHFRKNLESNE---NGHHSYQDEHESR---- 214 SFR RL R R E T YE+V+ DG FR++ E+ + H S + R Sbjct 443 DRRSFRVRLARAGP--RSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGR 500 Query 215 -------------LLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPP 261 ++ R+ P + L+D E+ +RH ++ + + D R Sbjct 501 DDVIPLHTISGNDIILTGCARIIRPPKIAS-RLIDANTLEYKTRHLIDGRIIDCDQRIGI 559 Query 262 IIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCY----YRFLTKGQQWIWL 317 + GY+ EV S + + H DD+ V+ AL Q + S Y YR T+ I+L Sbjct 560 VAGYMTDEVRNLSPFTFMHNDDVRWVIV---ALRQMYDCNSSYGESTYRLFTRNGNIIYL 616 Query 318 QTRFYITYHQWNSKPEFVVCTHRVV 342 Q++ Y+ + +K VC + ++ Sbjct 617 QSKGYLEIDKETNKVHSFVCVNTLL 641 > FBpp0304590 pep:known chromosome:BDGP5:X:2579613:2586813:1 gene:FBgn0003068 transcript:FBtr0332311 description:"period" Length=1218 Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 18/261 (7%) Query 96 EGFVMVFSA-SGCIYYVSESVTSLLGHTPGDI-INKSIFDLAFVDDRPNLYNILQNGGTL 153 + F V S G + Y + S+T +LG+ P D+ + +S D + DR + + G + Sbjct 238 DSFCCVISMHDGIVLYTTPSITDVLGY-PRDMWLGRSFIDFVHLKDRATFASQITTGIPI 296 Query 154 DPTQ-VVTTDNPISFRCRLQR-------GTLDFRDEVTYELVQFDGHFRKNLESNENGHH 205 ++ V D +F L+R G V+YE + FR+ E ++ Sbjct 297 AESRGSVPKDAKSTFCVMLRRYRGLKSGGFGVIGRPVSYEPFRLGLTFREAPEEARPDNY 356 Query 206 SYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGY 265 + + LL +C + V D ++ +F RH+ +D A +GY Sbjct 357 MVSN-GTNMLLVICATPIKSSYKVPD-EILSQKSPKFAIRHTATGIISHVDSAAVSALGY 414 Query 266 LPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGE-----LTSCYYRFLTKGQQWIWLQTR 320 LP +++G S D+YH +DL + +E +M+KG+ S YRFL + ++ L+T Sbjct 415 LPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETE 474 Query 321 FYITYHQWNSKPEFVVCTHRV 341 + + W+ K EFVV HRV Sbjct 475 WTSFVNPWSRKLEFVVGHHRV 495 > FBpp0070455 pep:known chromosome:BDGP5:X:2579613:2586813:1 gene:FBgn0003068 transcript:FBtr0070477 description:"period" Length=1218 Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 18/261 (7%) Query 96 EGFVMVFSA-SGCIYYVSESVTSLLGHTPGDI-INKSIFDLAFVDDRPNLYNILQNGGTL 153 + F V S G + Y + S+T +LG+ P D+ + +S D + DR + + G + Sbjct 238 DSFCCVISMHDGIVLYTTPSITDVLGY-PRDMWLGRSFIDFVHLKDRATFASQITTGIPI 296 Query 154 DPTQ-VVTTDNPISFRCRLQR-------GTLDFRDEVTYELVQFDGHFRKNLESNENGHH 205 ++ V D +F L+R G V+YE + FR+ E ++ Sbjct 297 AESRGSVPKDAKSTFCVMLRRYRGLKSGGFGVIGRPVSYEPFRLGLTFREAPEEARPDNY 356 Query 206 SYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGY 265 + + LL +C + V D ++ +F RH+ +D A +GY Sbjct 357 MVSN-GTNMLLVICATPIKSSYKVPD-EILSQKSPKFAIRHTATGIISHVDSAAVSALGY 414 Query 266 LPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGE-----LTSCYYRFLTKGQQWIWLQTR 320 LP +++G S D+YH +DL + +E +M+KG+ S YRFL + ++ L+T Sbjct 415 LPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETE 474 Query 321 FYITYHQWNSKPEFVVCTHRV 341 + + W+ K EFVV HRV Sbjct 475 WTSFVNPWSRKLEFVVGHHRV 495 > FBpp0293064 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene:FBgn0262139 transcript:FBtr0304121 description:"trachealess" Length=929 Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 91/423 (22%), Positives = 169/423 (40%), Gaps = 91/423 (22%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 88 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 146 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 147 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 205 Query 116 TSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQ--------------------------- 148 + LG + ++ SIFD D + + L Sbjct 206 SIYLGLSQVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGM 265 Query 149 ----NGGTLDPTQVVTTDNPISFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESN--EN 202 +G + D + T+NP Q T ++ +D F ++S + Sbjct 266 ASPTSGASDDGSGTHGTNNPDVAASMTQASTSGYKG--------YDRSFCVRMKSTLTKR 317 Query 203 GHHSYQDEHESRLLFVCT---------GRLYMPQLVRDVSL--------VDTIRSE---F 242 G H ++ +L +C R P L+ V+L V IR E F Sbjct 318 GCH-FKSSGYRVVLLLCKLRPQYTFSHSRKSQPPLLGMVALAIALPPPSVHEIRLECDMF 376 Query 243 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTS 302 +R + + + + R ++ Y P +++ S Y H +D ++ H L++KG++ + Sbjct 377 VTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLT 436 Query 303 CYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETEESV 362 YYR + K + WLQT + N+ + ++C + V+S E E + Sbjct 437 GYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-----------NRENENMI 485 Query 363 RDC 365 DC Sbjct 486 LDC 488 > FBpp0293065 pep:known chromosome:BDGP5:3L:366524:392633:-1 gene:FBgn0262139 transcript:FBtr0304122 description:"trachealess" Length=966 Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 91/423 (22%), Positives = 169/423 (40%), Gaps = 91/423 (22%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 125 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 183 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 184 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 242 Query 116 TSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQ--------------------------- 148 + LG + ++ SIFD D + + L Sbjct 243 SIYLGLSQVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAGGGM 302 Query 149 ----NGGTLDPTQVVTTDNPISFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESN--EN 202 +G + D + T+NP Q T ++ +D F ++S + Sbjct 303 ASPTSGASDDGSGTHGTNNPDVAASMTQASTSGYKG--------YDRSFCVRMKSTLTKR 354 Query 203 GHHSYQDEHESRLLFVCT---------GRLYMPQLVRDVSL--------VDTIRSE---F 242 G H ++ +L +C R P L+ V+L V IR E F Sbjct 355 GCH-FKSSGYRVVLLLCKLRPQYTFSHSRKSQPPLLGMVALAIALPPPSVHEIRLECDMF 413 Query 243 TSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTS 302 +R + + + + R ++ Y P +++ S Y H +D ++ H L++KG++ + Sbjct 414 VTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLT 473 Query 303 CYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETEESV 362 YYR + K + WLQT + N+ + ++C + V+S E E + Sbjct 474 GYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-----------NRENENMI 522 Query 363 RDC 365 DC Sbjct 523 LDC 525 > FBpp0073368 pep:known chromosome:BDGP5:X:11510159:11513981:1 gene:FBgn0002723 transcript:FBtr0073521 description:"Methoprene-tolerant" Length=716 Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/141 (27%), Positives = 66/141 (47%), Gaps = 13/141 (9%) Query 13 RRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEITVRSR 69 R RNL+EK+RRD+ N + EL +MV + ++R++DK+ VL+ L+ + Sbjct 38 REARNLAEKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVFGKSAS 97 Query 70 AHDVQEDWKPAFLSNE----------EFTYLVLEALEGFVMVFSASGCIYYVSESVTSLL 119 + K +S T +++ L+ + + SG I VS SV LL Sbjct 98 RRRKKTGLKGTGMSASPVGDLPNPSLHLTDTLMQLLDCCFLTLTCSGQIVLVSTSVEQLL 157 Query 120 GHTPGDIINKSIFDLAFVDDR 140 GH D+ +++ + DD+ Sbjct 158 GHCQSDLYGQNLLQITHPDDQ 178 Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 54/106 (51%), Gaps = 7/106 (7%) Query 241 EFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGEL 300 E+ +RH ++ + D R + GY+ EV S + + H DD+ V+ AL Q + Sbjct 403 EYHTRHLIDGSIIDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDVRWVIV---ALRQMYDC 459 Query 301 TSCY----YRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVV 342 S Y YR L++ ++I+L T+ ++ + ++K +C + ++ Sbjct 460 NSDYGESCYRLLSRNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTLL 505 > FBpp0293063 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene:FBgn0262139 transcript:FBtr0304120 description:"trachealess" Length=958 Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/134 (25%), Positives = 61/134 (46%), Gaps = 14/134 (10%) Query 235 VDTIRSE---FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 V IR E F +R + + + + R ++ Y P +++ S Y H +D ++ H Sbjct 395 VHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSH 454 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKST 351 L++KG++ + YYR + K + WLQT + N+ + ++C + V+S Sbjct 455 SDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-------- 506 Query 352 KQERTETEESVRDC 365 E E + DC Sbjct 507 ---NRENENMILDC 517 Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/138 (27%), Positives = 69/138 (50%), Gaps = 18/138 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 88 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 146 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 147 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 205 Query 116 TSLLGHTPGDIINKSIFD 133 + LG + ++ SIFD Sbjct 206 SIYLGLSQVEMTGSSIFD 223 > FBpp0303180 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene:FBgn0262139 transcript:FBtr0330147 description:"trachealess" Length=952 Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/134 (25%), Positives = 61/134 (46%), Gaps = 14/134 (10%) Query 235 VDTIRSE---FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 V IR E F +R + + + + R ++ Y P +++ S Y H +D ++ H Sbjct 389 VHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSH 448 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKST 351 L++KG++ + YYR + K + WLQT + N+ + ++C + V+S Sbjct 449 SDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-------- 500 Query 352 KQERTETEESVRDC 365 E E + DC Sbjct 501 ---NRENENMILDC 511 Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/138 (27%), Positives = 69/138 (50%), Gaps = 18/138 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 88 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 146 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 147 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 205 Query 116 TSLLGHTPGDIINKSIFD 133 + LG + ++ SIFD Sbjct 206 SIYLGLSQVEMTGSSIFD 223 > FBpp0306033 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene:FBgn0262139 transcript:FBtr0333902 description:"trachealess" Length=923 Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/134 (25%), Positives = 61/134 (46%), Gaps = 14/134 (10%) Query 235 VDTIRSE---FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 V IR E F +R + + + + R ++ Y P +++ S Y H +D ++ H Sbjct 360 VHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSH 419 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKST 351 L++KG++ + YYR + K + WLQT + N+ + ++C + V+S Sbjct 420 SDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-------- 471 Query 352 KQERTETEESVRDC 365 E E + DC Sbjct 472 ---NRENENMILDC 482 Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/138 (27%), Positives = 69/138 (50%), Gaps = 18/138 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 88 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 146 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 147 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 205 Query 116 TSLLGHTPGDIINKSIFD 133 + LG + ++ SIFD Sbjct 206 SIYLGLSQVEMTGSSIFD 223 > FBpp0306032 pep:known chromosome:BDGP5:3L:366524:392633:-1 gene:FBgn0262139 transcript:FBtr0333901 description:"trachealess" Length=989 Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/134 (25%), Positives = 61/134 (46%), Gaps = 14/134 (10%) Query 235 VDTIRSE---FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 V IR E F +R + + + + R ++ Y P +++ S Y H +D ++ H Sbjct 426 VHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSH 485 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKST 351 L++KG++ + YYR + K + WLQT + N+ + ++C + V+S Sbjct 486 SDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-------- 537 Query 352 KQERTETEESVRDC 365 E E + DC Sbjct 538 ---NRENENMILDC 548 Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/138 (27%), Positives = 69/138 (50%), Gaps = 18/138 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 125 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 183 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 184 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 242 Query 116 TSLLGHTPGDIINKSIFD 133 + LG + ++ SIFD Sbjct 243 SIYLGLSQVEMTGSSIFD 260 > FBpp0303179 pep:known chromosome:BDGP5:3L:366524:377316:-1 gene:FBgn0262139 transcript:FBtr0330146 description:"trachealess" Length=1022 Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/134 (25%), Positives = 61/134 (46%), Gaps = 14/134 (10%) Query 235 VDTIRSE---FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 V IR E F +R + + + + R ++ Y P +++ S Y H +D ++ H Sbjct 395 VHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSH 454 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKST 351 L++KG++ + YYR + K + WLQT + N+ + ++C + V+S Sbjct 455 SDLIEKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIICVNYVIS-------- 506 Query 352 KQERTETEESVRDC 365 E E + DC Sbjct 507 ---NRENENMILDC 517 Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/138 (27%), Positives = 69/138 (50%), Gaps = 18/138 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK-----NHN- 62 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK H Sbjct 88 KEKSRD-AARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGD 146 Query 63 -----EITVRSRAHDVQEDWKPA--FLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 E + S+ PA + T+ +L++L+GF + +A G Y+SE+V Sbjct 147 PPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH-ILQSLDGFALAVAADGRFLYISETV 205 Query 116 TSLLGHTPGDIINKSIFD 133 + LG + ++ SIFD Sbjct 206 SIYLGLSQVEMTGSSIFD 223 > FBpp0289845 pep:known chromosome:BDGP5:3R:21902314:21924433:-1 gene:FBgn0039411 transcript:FBtr0300618 description:"dysfusion" Length=920 Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 61/294 (21%), Positives = 115/294 (39%), Gaps = 57/294 (19%) Query 93 EALEGFVMVFSASGCIYYVSESVTSLLGHTPGDII--NKSIFDLAFVDDRPNLYNILQNG 150 +AL GF+M+ + +G + Y+S++ LGH+ D++ S++D+ D N+ L Sbjct 234 KALSGFLMMLTQNGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHANIQAELNRN 293 Query 151 GTLDPTQVVTTDNPIS----------------------------------FRCRLQ---- 172 P + + F CR+ Sbjct 294 VPPQPGGSSQASSGGAGGAGGAGDSTSSNGSAAGAGGAGGASSLEGEHRMFLCRMNVSRN 353 Query 173 -RGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRD 231 R + F D+ ++V GH+ L +E L CT + MP+ R+ Sbjct 354 ARRQMRFGDQ---KVVLVQGHYLSFLP--------LCSRNEPVFLATCT-PIAMPE-TRE 400 Query 232 VSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 +V + FT+ HS++ K +D +GY + GTS Y+ H D+L + H Sbjct 401 C-VVQGATNVFTTIHSMDMKIAHIDKNGEFHLGYDKSTLQGTSWYNLIHSDNLTEAQKKH 459 Query 292 EALMQKGELTSC--YYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 ++Q + SC R ++ W+ + +++ +VCT++V++ Sbjct 460 SLIIQSEQDRSCILLVRMQRSSGEYTWVHVVLQVRDSPDSTQQPVIVCTNQVLN 513 > FBpp0112206 pep:known chromosome:BDGP5:3R:21902314:21924433:-1 gene:FBgn0039411 transcript:FBtr0113294 description:"dysfusion" Length=917 Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/294 (21%), Positives = 115/294 (39%), Gaps = 57/294 (19%) Query 93 EALEGFVMVFSASGCIYYVSESVTSLLGHTPGDII--NKSIFDLAFVDDRPNLYNILQNG 150 +AL GF+M+ + +G + Y+S++ LGH+ D++ S++D+ D N+ L Sbjct 234 KALSGFLMMLTQNGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHANIQAELNRN 293 Query 151 GTLDPTQVVTTDNPIS----------------------------------FRCRLQ---- 172 P + + F CR+ Sbjct 294 VPPQPGGSSQASSGGAGGAGGAGDSTSSNGSAAGAGGAGGASSLEGEHRMFLCRMNVSRN 353 Query 173 -RGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRD 231 R + F D+ ++V GH+ L +E L CT + MP+ R+ Sbjct 354 ARRQMRFGDQ---KVVLVQGHYLSFLP--------LCSRNEPVFLATCT-PIAMPE-TRE 400 Query 232 VSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 +V + FT+ HS++ K +D +GY + GTS Y+ H D+L + H Sbjct 401 C-VVQGATNVFTTIHSMDMKIAHIDKNGEFHLGYDKSTLQGTSWYNLIHSDNLTEAQKKH 459 Query 292 EALMQKGELTSCYY--RFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 ++Q + SC R ++ W+ + +++ +VCT++V++ Sbjct 460 SLIIQSEQDRSCILLVRMQRSSGEYTWVHVVLQVRDSPDSTQQPVIVCTNQVLN 513 > FBpp0112205 pep:known chromosome:BDGP5:3R:21902314:21923774:-1 gene:FBgn0039411 transcript:FBtr0113293 description:"dysfusion" Length=884 Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/294 (21%), Positives = 115/294 (39%), Gaps = 57/294 (19%) Query 93 EALEGFVMVFSASGCIYYVSESVTSLLGHTPGDII--NKSIFDLAFVDDRPNLYNILQNG 150 +AL GF+M+ + +G + Y+S++ LGH+ D++ S++D+ D N+ L Sbjct 198 KALSGFLMMLTQNGKLLYISDNAAEYLGHSMEDLLIHGDSVYDIIDKQDHANIQAELNRN 257 Query 151 GTLDPTQVVTTDNPIS----------------------------------FRCRLQ---- 172 P + + F CR+ Sbjct 258 VPPQPGGSSQASSGGAGGAGGAGDSTSSNGSAAGAGGAGGASSLEGEHRMFLCRMNVSRN 317 Query 173 -RGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQLVRD 231 R + F D+ ++V GH+ L +E L CT + MP+ R+ Sbjct 318 ARRQMRFGDQ---KVVLVQGHYLSFLP--------LCSRNEPVFLATCT-PIAMPE-TRE 364 Query 232 VSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 +V + FT+ HS++ K +D +GY + GTS Y+ H D+L + H Sbjct 365 C-VVQGATNVFTTIHSMDMKIAHIDKNGEFHLGYDKSTLQGTSWYNLIHSDNLTEAQKKH 423 Query 292 EALMQKGELTSC--YYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 ++Q + SC R ++ W+ + +++ +VCT++V++ Sbjct 424 SLIIQSEQDRSCILLVRMQRSSGEYTWVHVVLQVRDSPDSTQQPVIVCTNQVLN 477 > FBpp0087945 pep:known chromosome:BDGP5:2R:3882941:3886078:-1 gene:FBgn0027788 transcript:FBtr0088869 description:"Hairy/E(spl)-related with YRPW motif" Length=425 Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 5/69 (7%) Query 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVST-----NNRKMDKSTVLKSTISFLKNHNEIT 65 ++++ R + EKKRRD+ N + EL +V + + K++K+ +L+ T+ LK+ T Sbjct 100 SRKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVEHLKSLQSKT 159 Query 66 VRSRAHDVQ 74 + S ++D Q Sbjct 160 LDSLSYDPQ 168 > FBpp0298330 pep:known chromosome:BDGP5:4:1219484:1228244:1 gene:FBgn0263112 transcript:FBtr0307329 description:"Mitf" Length=704 Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust. Identities = 19/77 (25%), Positives = 40/77 (52%), Gaps = 9/77 (12%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNR---------KMDKSTVLKSTISFL 58 KD K+ N+ E++RR N + ELG+++ + + +K T+LKS++ ++ Sbjct 371 KDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYI 430 Query 59 KNHNEITVRSRAHDVQE 75 K R R +++++ Sbjct 431 KCLKHEVTRLRQNELRQ 447 > FBpp0298328 pep:known chromosome:BDGP5:4:1219484:1227065:1 gene:FBgn0263112 transcript:FBtr0307327 description:"Mitf" Length=730 Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust. Identities = 19/77 (25%), Positives = 39/77 (51%), Gaps = 9/77 (12%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKM---------DKSTVLKSTISFL 58 KD K+ N+ E++RR N + ELG+++ + +K T+LKS++ ++ Sbjct 397 KDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYI 456 Query 59 KNHNEITVRSRAHDVQE 75 K R R +++++ Sbjct 457 KCLKHEVTRLRQNELRQ 473 > FBpp0298327 pep:known chromosome:BDGP5:4:1219484:1228193:1 gene:FBgn0263112 transcript:FBtr0307326 description:"Mitf" Length=730 Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust. Identities = 19/77 (25%), Positives = 39/77 (51%), Gaps = 9/77 (12%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRKM---------DKSTVLKSTISFL 58 KD K+ N+ E++RR N + ELG+++ + +K T+LKS++ ++ Sbjct 397 KDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYI 456 Query 59 KNHNEITVRSRAHDVQE 75 K R R +++++ Sbjct 457 KCLKHEVTRLRQNELRQ 473 > FBpp0298329 pep:known chromosome:BDGP5:4:1222766:1227176:1 gene:FBgn0263112 transcript:FBtr0307328 description:"Mitf" Length=837 Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust. Identities = 19/77 (25%), Positives = 40/77 (52%), Gaps = 9/77 (12%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNR---------KMDKSTVLKSTISFL 58 KD K+ N+ E++RR N + ELG+++ + + +K T+LKS++ ++ Sbjct 504 KDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYI 563 Query 59 KNHNEITVRSRAHDVQE 75 K R R +++++ Sbjct 564 KCLKHEVTRLRQNELRQ 580 > FBpp0111448 pep:known chromosome:BDGP5:X:22274648:22277203:1 gene:FBgn0263829 transcript:FBtr0112536 Length=708 Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 23/36 (64%), Gaps = 1/36 (3%) Query 486 QYLEPAPYVGAVGVPAVLPLSLP-PIPVIVAQDQAQ 520 + + PA G + +PA +PL +P PIP +++ +AQ Sbjct 207 EKISPASAPGVIQIPAPIPLPVPAPIPAVLSVSEAQ 242 > FBpp0087879 pep:known chromosome:BDGP5:2R:4116476:4119832:-1 gene:FBgn0010109 transcript:FBtr0088803 description:"deadpan" Length=435 Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/63 (25%), Positives = 35/63 (56%), Gaps = 7/63 (11%) Query 4 DGDDKDDTKRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTIS 56 +G K + ++ + + EK+RR + N +NEL S++ + K++K+ +L+ T+ Sbjct 33 NGLSKAELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVK 92 Query 57 FLK 59 L+ Sbjct 93 HLQ 95 > FBpp0099504 pep:known chromosome:BDGP5:3L:8668859:8672353:1 gene:FBgn0001168 transcript:FBtr0100153 description:"hairy" Length=337 Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTISFLK 59 +R + + EK+RR + N +NEL +++ + K++K+ +L+ T+ L+ Sbjct 32 RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQ 86 > FBpp0076296 pep:known chromosome:BDGP5:3L:8669055:8672353:1 gene:FBgn0001168 transcript:FBtr0076569 description:"hairy" Length=337 Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (13%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTISFLK 59 +R + + EK+RR + N +NEL +++ + K++K+ +L+ T+ L+ Sbjct 32 RRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQ 86 Lambda K H a alpha 0.317 0.131 0.385 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 7296668976 Database: Drosophila_melanogaster.BDGP5.24_edited.pep.all.fa Posted date: Jan 15, 2015 11:01 AM Number of letters in database: 17,741,228 Number of sequences in database: 26,950 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40