BLASTP 2.2.27+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Apis_mellifera.GCA_000002195.1.24_edited.pep.all.fa 15,314 sequences; 6,447,461 total letters Query= EHJ69324 pep:known supercontig:DanPle_1.0:JH386160:331454:341674:-1 gene:KGM_10878 transcript:EHJ69324 description:"Clock " Length=600 Score E Sequences producing significant alignments: (Bits) Value GB48028-PA pep:known chromosome_group:GCA_000002195.1:1:3344276... 500 2e-168 GB43953-PA pep:novel chromosome_group:GCA_000002195.1:11:887085... 166 3e-43 GB44259-PA pep:known chromosome_group:GCA_000002195.1:7:1744221... 132 6e-33 GB54493-PA pep:novel chromosome_group:GCA_000002195.1:8:6006473... 125 3e-30 GB51615-PA pep:novel chromosome_group:GCA_000002195.1:1:2363150... 114 1e-26 GB44365-PA pep:known chromosome_group:GCA_000002195.1:7:1109162... 113 3e-26 GB44532-PA pep:novel chromosome_group:GCA_000002195.1:5:9933857... 90.1 7e-19 GB49843-PA pep:novel chromosome_group:GCA_000002195.1:11:610403... 73.9 6e-14 GB45967-PA pep:novel chromosome_group:GCA_000002195.1:16:609617... 72.4 3e-13 GB52077-PA pep:known chromosome_group:GCA_000002195.1:12:104995... 60.5 1e-09 GB52114-PA pep:known chromosome_group:GCA_000002195.1:12:116913... 57.8 7e-09 GB50615-PA pep:novel supercontig:GCA_000002195.1:GroupUn370:102... 48.9 9e-07 GB51105-PA pep:novel chromosome_group:GCA_000002195.1:10:993258... 37.4 0.012 GB45966-PA pep:novel chromosome_group:GCA_000002195.1:16:607966... 33.1 0.048 GB55498-PA pep:known chromosome_group:GCA_000002195.1:2:1543205... 34.7 0.074 GB53417-PA pep:novel chromosome_group:GCA_000002195.1:9:1021687... 32.0 0.50 GB52827-PA pep:novel chromosome_group:GCA_000002195.1:8:9161336... 31.2 1.2 GB42192-PA pep:novel chromosome_group:GCA_000002195.1:1:1345270... 30.4 1.5 GB55781-PA pep:known chromosome_group:GCA_000002195.1:3:4907623... 30.8 1.8 GB49989-PA pep:novel chromosome_group:GCA_000002195.1:15:833476... 27.7 2.5 GB47799-PA pep:known chromosome_group:GCA_000002195.1:13:706085... 29.3 3.7 GB40634-PA pep:known chromosome_group:GCA_000002195.1:12:613406... 28.9 4.1 GB41671-PA pep:known chromosome_group:GCA_000002195.1:14:871547... 29.3 5.3 GB52667-PA pep:novel supercontig:GCA_000002195.1:GroupUn125:196... 28.9 5.3 GB42977-PA pep:known chromosome_group:GCA_000002195.1:6:1363005... 28.9 6.4 > GB48028-PA pep:known chromosome_group:GCA_000002195.1:1:3344276:3350136:-1 gene:GB48028 transcript:GB48028-RA description:"Uncharacterized protein " Length=724 Score = 500 bits (1287), Expect = 2e-168, Method: Compositional matrix adjust. Identities = 230/344 (67%), Positives = 281/344 (82%), Gaps = 5/344 (1%) Query 16 RNLSEKKRRDQFNMLVNELGSMVSTNNRKMDKSTVLKSTISFLKNHNEITVRSRAHDVQE 75 RNLSEKKRRDQFNMLVNELGSMVS+N RKMDKSTVLKSTI FLKNHNEI VRSR H++QE Sbjct 32 RNLSEKKRRDQFNMLVNELGSMVSSNTRKMDKSTVLKSTILFLKNHNEIAVRSRVHEIQE 91 Query 76 DWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLA 135 DWKP+FLSNEEFT+L+LEAL+GF+MVFS+SG IYYVSESVTSLLG+ P ++ N +++D+ Sbjct 92 DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIYYVSESVTSLLGYLPNELENTTVYDIT 151 Query 136 FVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRCRLQRGTLDFRDEVTYELVQFDGHFRK 195 + +D+ LYN+L N + + ++ ISF C ++RG + + YELVQF G+FR Sbjct 152 YQEDQSPLYNVLLNPAITKDRRNIREEDKISFSCHIKRGGQNIEENPIYELVQFVGYFRS 211 Query 196 NLESN-----ENGHHSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEW 250 ++++ N +++L+FV TGRL PQL+R++S++D +SEFTSRHSLEW Sbjct 212 DVDTEVDNLLPNTKFGNTTGKDTKLVFVGTGRLQTPQLIRELSVLDNTKSEFTSRHSLEW 271 Query 251 KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTK 310 KFLFLDHRAPPIIGYLPFEVLGTSGYDYYH DDL+KVV+CHE+LMQKGE TSCYYRFLTK Sbjct 272 KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGTSCYYRFLTK 331 Query 311 GQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQE 354 GQQWIWLQTRFYITY+QWNSKPEF+VCTH VVSY D+IK ++E Sbjct 332 GQQWIWLQTRFYITYNQWNSKPEFIVCTHYVVSYIDVIKELRKE 375 > GB43953-PA pep:novel chromosome_group:GCA_000002195.1:11:887085:930305:-1 gene:GB43953 transcript:GB43953-RA description:"Uncharacterized protein " Length=1006 Score = 166 bits (420), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 125/394 (32%), Positives = 191/394 (48%), Gaps = 71/394 (18%) Query 9 DDTKRRTRNLSEKKRRDQFNMLVNELGSMVS---TNNRKMDKSTVLKSTISFLKN-HNEI 64 DD+K++ + EK+RRD+ N + EL +MV +RK+DK TVL+ + LK + Sbjct 427 DDSKKQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTILGAV 486 Query 65 TVRSRAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSAS-GCIYYVSESVTSLLGHTP 123 T + H +KPAFLS++E L+L+A EGFV V G I YVSESV L ++ Sbjct 487 TSYTEGH-----YKPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQ 541 Query 124 GDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQ---------VVTTDNP---------- 164 GD++ +S FD+ D + L + L P + V TD P Sbjct 542 GDLLGQSWFDILHPKDVAKVKEQLSS-SDLSPRERLIDAKTMLPVKTDVPQGVSRLCPGA 600 Query 165 -ISFRCRLQR-------GTLDFRDEV-----------------TYELVQFDGHFRK---- 195 SF CR++R G L ++E Y ++Q G+ + Sbjct 601 RRSFFCRMKRKVEGIRCGELQVKEESESASGCHRRKKQQNVDWKYCVIQCTGYLKSWAPA 660 Query 196 --NLESNENGHHSYQDEHESRL-LFVCTGRLY--MPQLVRDVSLVDTIRSEFTSRHSLEW 250 +LE H D L V GRL +P + + +I+ F SRH+++ Sbjct 661 KIDLEE----HEGDGDGEACNLSCLVAVGRLQSTIPTSLPKKPRLRSIK--FVSRHAMDG 714 Query 251 KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGE-LTSCYYRFLT 309 KFLF+D RA ++G+LP E+LGTS Y+YYH DD+ + H+A +Q E +T+ YRF T Sbjct 715 KFLFVDQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQASESVTTQIYRFRT 774 Query 310 KGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 KG ++ LQ+ + + W E+++ + V S Sbjct 775 KGASFVKLQSEWKSFRNPWTKDIEYLIAKNSVTS 808 > GB44259-PA pep:known chromosome_group:GCA_000002195.1:7:1744221:1758579:1 gene:GB44259 transcript:GB44259-RA description:"Uncharacterized protein " Length=614 Score = 132 bits (333), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 112/398 (28%), Positives = 175/398 (44%), Gaps = 77/398 (19%) Query 31 VNELGSMVSTNN---RKMDKSTVLKSTISFLKNHNEITVRSRAHDVQED-WKPAFLSNEE 86 + EL MV T + RK DK T+L+ ++ ++N +R + + +KP+FL+++E Sbjct 5 ITELSDMVPTCSALARKPDKLTILRMAVAHMRN-----LRGTGNTSSDGAYKPSFLTDQE 59 Query 87 FTYLVLEALEGFVMVFSA-SGCIYYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYN 145 +L+LEA +GF+ V S SG I YVS+SV +L +T D S++ DD + Sbjct 60 LKHLILEAADGFLFVVSCNSGTIIYVSDSVAPVLNYTQNDWYGTSLYSQVHPDDTEKVKE 119 Query 146 IL-----QNGG-TLD-PTQVVTTDNPISFR----------CRLQRGTLD----------- 177 L +NGG LD T V + S R CR++ G + Sbjct 120 QLSGAEPENGGRVLDLKTGTVKKEGQSSMRLCMGSRRGFICRMKVGNMQTTGDMAAAHGL 179 Query 178 ------------FRDEVTYELVQFDGHFRK---------------NLESNENGH------ 204 RD Y +V G+ + L E Sbjct 180 HHVKQRNSLGPPARDGQNYAVVHCTGYIKSWPPNGDFVPPCVPGMGLADREAAGVPVGPD 239 Query 205 HSYQDEH-ESRLLFVCTGRLYMPQLVRDVSLVDT-IRSEFTSRHSLEWKFLFLDHRAPPI 262 DE+ S V GRL + L + +EF SRHS E KF F+D R I Sbjct 240 GVVTDENVSSHCCLVAIGRLQVTSTPNSSDLAGSNSNNEFISRHSAEGKFTFVDQRVGGI 299 Query 263 IGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQ-KGELTSCYYRFLTKGQQWIWLQTRF 321 +GY P E+LG Y+++H +DL + E +++ KG++ S YRF K + W+WL+T Sbjct 300 LGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTSA 359 Query 322 YITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETE 359 + + +N E++VCT+ ++A +TE E Sbjct 360 FAFLNPYNDDVEYIVCTN---THAKSFHPGSDGQTENE 394 > GB54493-PA pep:novel chromosome_group:GCA_000002195.1:8:6006473:6141092:-1 gene:GB54493 transcript:GB54493-RA Length=979 Score = 125 bits (314), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 112/457 (25%), Positives = 194/457 (42%), Gaps = 71/457 (16%) Query 15 TRNLSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTISFLK------------ 59 T++ K+ R++ N ++ L S++ K+D+ ++L+ ++S+L+ Sbjct 51 TKSNPSKRHRERLNAELDTLASLLPFEQNILSKLDRLSILRLSVSYLRTKSYFQVVMHKD 110 Query 60 ----NHNEITVRSRAHDVQEDWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESV 115 +H++ R+R + L E F L+AL GF+++ + G +++ + S+ Sbjct 111 KEENSHHDSHYRARELAAFAAYDHHHLDGEMF----LQALNGFLLILTCDGEVFFATHSI 166 Query 116 TSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQNGG-------------TLDP--TQVVT 160 S LG DI+++S+++L +DR L L L P + ++ Sbjct 167 ESYLGFHQSDIVHQSVYELVHSEDREELQRQLMWNSFLPSESASLPLHDALSPQHSHLLE 226 Query 161 TDNPISFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCT 220 + FRC L + R ++ + G RK +E L +CT Sbjct 227 RSFTVRFRCLLDNTSGFLRLDIRGRVKILHGQNRKT------------EEPPLALFALCT 274 Query 221 GRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYH 280 + P + +V D + F S+H L+ + +D R ++GY E+ GYD H Sbjct 275 P--FGPPSLLEVPQKDVM---FKSKHKLDLALVSMDQRGKMLLGYSDAELANLGGYDLVH 329 Query 281 FDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHR 340 +DDL V S H+ L++ G YRF K W WLQT + Y NSKP+FV+ THR Sbjct 330 YDDLAYVASAHQELLKTGASGMIAYRFQKKDGGWQWLQTSSRLVYK--NSKPDFVISTHR 387 Query 341 VVSYADIIKSTKQERTETEESVRDCDHNGSSLKDPS--TEDAMVPVSPS----------Y 388 + + + + + S D S D T M P PS Y Sbjct 388 PLMEEEGRDLLGKRTMDFKVSYLDAGLTNSYFSDSDSLTGSVMTPTLPSQPTSQRVNRRY 447 Query 389 MSEASDAFATSYNSMSKLASVKSAATSGSTSATVATL 425 ++ D +T N +KL++ S S + TVA++ Sbjct 448 KTQLRDFLSTCRNKRTKLSAQSS--VSPPATPTVASV 482 > GB51615-PA pep:novel chromosome_group:GCA_000002195.1:1:23631501:23644184:1 gene:GB51615 transcript:GB51615-RA description:"Uncharacterized protein " Length=763 Score = 114 bits (285), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 106/438 (24%), Positives = 199/438 (45%), Gaps = 54/438 (12%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLKNHNEI 64 K+ +K+ R RRD+ N EL ++ + +MDK++V++ T S+LK Sbjct 66 KEKSKKAAR-----IRRDRENQEFLELAKLLPVPAALTGQMDKASVIRLTTSYLK----- 115 Query 65 TVRSR-AHDVQEDWKPAFLSN-------EEFTYLVLEALEGFVMVFSASGCIYYVSESVT 116 +R+ + + E+W + N +E T +L+AL+GFV V + G I Y+SE+ + Sbjct 116 -MRALFPNGLGEEWGASQPGNISLQIALKEVTSYILQALDGFVFVLAPDGKIMYISETAS 174 Query 117 SLLGHTPGDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNP-----------I 165 LG ++ SIF+ + +D + ++L + T+ N + Sbjct 175 VHLGMAQVELTGNSIFEYIYQNDHAEMLSVLNLPQSPADLASFTSANSRGEIELERVFIL 234 Query 166 SFRCRLQRGTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYM 225 +C L + E Y+++ G+ R +E Y+D R G L + Sbjct 235 RMKCNLAKRCAGLVTE-GYKVIHCSGYLRCVVEGPVGS--EYEDG-AGRHCIRKVGLLAV 290 Query 226 PQLV--RDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDD 283 + R ++ V ++ F R SL+ K +F+D + GY P +++ + Y Y H D Sbjct 291 GHSLPGRCLTEVKLYQNMFMFRASLDLKLIFVDANVSQLTGYDPPDLIEKTLYHYVHGCD 350 Query 284 LEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS 343 + ++ H L+ KG++ + YYRFLTK W+W+Q+ I ++ +S+P +V + V+ Sbjct 351 MMQLRHAHGTLLYKGQVITKYYRFLTKSGGWVWMQSYVTIVHNSRSSRPHCIVSVNYVL- 409 Query 344 YADIIKSTKQERTETEESVRDCDHNG--SSLKDPSTEDAMVPVSPSYMSEASDAFATS-- 399 TK E T+ + +C+ S+ +P + P++ ++E + +S Sbjct 410 -------TKPENTDL---LLNCEQKSYCSNPSNPPSTPLTTPITSGTVNELDNHSPSSPA 459 Query 400 YNSMSKLASVKSAATSGS 417 Y + SK + A G+ Sbjct 460 YRTRSKESPDNDYANGGT 477 > GB44365-PA pep:known chromosome_group:GCA_000002195.1:7:11091626:11102182:-1 gene:GB44365 transcript:GB44365-RA description:"Uncharacterized protein " Length=839 Score = 113 bits (282), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 105/416 (25%), Positives = 179/416 (43%), Gaps = 48/416 (12%) Query 18 LSEKKRRDQFNMLVNELGSMVST---NNRKMDKSTVLKSTISFLKNHNEITVRSRAHDVQ 74 ++EK+RRD N ++ + ++V T + RKMDK ++L+ +FL+ H + R Sbjct 1 MAEKQRRDNLNTNISAMAALVPTVAESPRKMDKISILRLAANFLRIHYTV---GRG---V 54 Query 75 EDWKPAFLSNEEFTYLVLEAL---EGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSI 131 D+ P L + + + + L F +V + +G I YVS V LGHT D++ S+ Sbjct 55 SDFLPRELGDLDLEQYIGDNLIKNGSFFIVVTTTGKIVYVSRQVQEHLGHTQADLLGHSL 114 Query 132 FDLAFVDDRPNLYNILQ----NGGTLDPTQVV--TTDNPI-------------------S 166 + D L L G Q+ T DN + Sbjct 115 YAFIHPKDEEELARNLNPDEMQGVVSSLPQITDGTNDNSNSSEDSTSSKNGKTFQNQRRT 174 Query 167 FRCRLQRGTLDFRDEVTYELVQFDGHFR-----KNLESNEN-GHHSYQDEHESRLLFVCT 220 F R+ T R+ YE +F G R K SN N H + ++FV Sbjct 175 FELRMLHRTSSRREHTQYEWFEFSGILRLADACKTSTSNVNRSRHREITSTSNDIVFVGV 234 Query 221 GRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYH 280 +L M Q + +S++D ++E+ +RH ++ + ++ DHR + GYL EV G S + + H Sbjct 235 AQLLMKQPLTKISIIDANKNEYITRHLVDGRIIYCDHRVSVVAGYLSEEVSGMSAFGFMH 294 Query 281 FDD-LEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTH 339 DD + +V+ + + S YR +K + I+L+T Y+ + +VC + Sbjct 295 KDDRIWAMVALRQMYDRAETCGSSCYRLTSKTGEPIYLRTHGYLEVDKDTQIAVSLVCIN 354 Query 340 RVVSYADIIKSTKQERTE----TEESVRDCDHNGSSLKDPSTEDAMVPVSPSYMSE 391 +VS + I+ +Q + E++R NG D+ P S S M + Sbjct 355 TLVSEEEGIQLMQQMKKRFSATISETMRAIIQNGDDASIDLGSDSQNPNSKSNMED 410 > GB44532-PA pep:novel chromosome_group:GCA_000002195.1:5:9933857:9968047:-1 gene:GB44532 transcript:GB44532-RA description:"Uncharacterized protein " Length=1932 Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 88/385 (23%), Positives = 172/385 (45%), Gaps = 37/385 (10%) Query 4 DGDDK--------DDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNRK--MDKSTVLKS 53 +GDD+ + K ++R+ + +R + ++ + ++ T + +DK++V++ Sbjct 111 NGDDQILEDYLSNEKRKEKSRDAARYRRSKETDIFTDLAAALPVTPEQAAHLDKASVMRL 170 Query 54 TISFLKNHNEITVRSRAHDVQEDWKPAFLSNEE----FTYLVLEALEGFVMVFSASGCIY 109 I++LK VRS D P ++ E L +AL GF++V S+ G + Sbjct 171 AIAYLK------VRSVV-----DCIPGPMTKSETLNQMDELFSKALNGFMLVLSSDGNMI 219 Query 110 YVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPISFRC 169 Y+SE+V+ LG + D++ +S+++ + D L L + L+ ++ + +C Sbjct 220 YLSENVSDYLGISQMDMMGQSVYEYSHPCDHEELRECL-SSKPLENSEKRACSFFLRLKC 278 Query 170 RL-QRGTLDFRDEVTYELVQFDGHFR------KNLESNENGHHSYQDEHESRLLFVCTGR 222 L +G +Y+++ G N N+ + +E R Sbjct 279 TLTSKGRKVNLKSASYKVIHCTGRLTYIRDPVSNSSDNDETRNKKDEEGNERDTGASLVL 338 Query 223 LYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFD 282 L P + R F S+HSL KF + D + +G+ E++G S +++YH Sbjct 339 LGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYADEKLAEYLGWNSEELVGQSVFEFYHAL 398 Query 283 DLEKVVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVV 342 D + ++L KG+ + YRFL K + W+ T+ + + KP VVC + ++ Sbjct 399 DNLALDKSFKSLFSKGQCETVAYRFLGKRGGYAWVVTQATLIHCSKQQKPLSVVCVNYIL 458 Query 343 S---YADIIKSTKQ-ERTETEESVR 363 S D + S +Q +TE++V+ Sbjct 459 SGVEREDEVYSARQLAARDTEKAVK 483 > GB49843-PA pep:novel chromosome_group:GCA_000002195.1:11:6104035:6113000:1 gene:GB49843 transcript:GB49843-RA description:"Uncharacterized protein " Length=630 Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 67/271 (25%), Positives = 131/271 (48%), Gaps = 34/271 (13%) Query 93 EALEGFVMVFSASGCIYYVSESVTSLLGHTPGDII--NKSIFDLAFVDDRPNLYNILQNG 150 +A+ GF+M+ + G + Y+SE+ LGH+ D++ S++D+ +D + ++ ++QN Sbjct 85 KAMSGFIMMMTQQGKLLYISENAAEYLGHSMEDLLIHGDSVYDV--IDKQDHM--VVQN- 139 Query 151 GTLDPTQVVTTDNPISFRCRLQ-----RGTLDFRDEVTYELVQFDGHFRKNLE-SNENGH 204 L + +D + F CR+ R L F D+ ++V +GHF + N N Sbjct 140 -QLSRNSPIPSDRRL-FLCRINVSRNSRRQLRFGDQ---KVVLVEGHFLPFVPVCNRN-- 192 Query 205 HSYQDEHESRLLFVCTGRLYMPQLVRDVSLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIG 264 E L CT + +P+ R+ S+V + FT+ HS++ K+L +D A + Sbjct 193 -------EFVFLASCTP-VVLPE-TRE-SIVQGATNIFTTIHSMDMKYLHIDKTAESHLE 242 Query 265 YLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTS--CYYRFLTKGQQWIWLQTRFY 322 Y E++ S Y+ H+D + H+ ++Q + S R + +W W+ Sbjct 243 YTRNELVNMSWYNLLHWDSIRTAYCKHQTVIQSDQERSATALLRLQNRSGRWFWVHCVLQ 302 Query 323 ITYHQWNSKPEFVVCTHRVVS--YADIIKST 351 + + +VCT++V+S A++++S+ Sbjct 303 VKDTSEECQHPIIVCTNQVLSDREAEVMRSS 333 > GB45967-PA pep:novel chromosome_group:GCA_000002195.1:16:6096179:6117850:1 gene:GB45967 transcript:GB45967-RA description:"Uncharacterized protein " Length=1579 Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/303 (24%), Positives = 136/303 (45%), Gaps = 34/303 (11%) Query 68 SRAHDVQE----DWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTP 123 S +H VQ+ P LSN++ ++LEAL+GF+ V + G + YV++++T + +T Sbjct 54 SNSHAVQQGEVSSSNPNILSNDQVGPILLEALDGFLFVVNTEGRVEYVTDNITQYINYTK 113 Query 124 GDIINKSIFDLAFVDDRPNLYNILQNGGTLDPTQVVTTDNPI-----SFRCRLQRGTLDF 178 D++ K I+++ D +N +L P Q+ T+ +F CR D Sbjct 114 DDVLGKDIYNIIHHGD----HNTFM--PSLLPMQLGWTNEQQPQRNRTFNCRFLVKPPDD 167 Query 179 RDEV---------TYELVQF-DGHFRKNLESNENGHHSYQDEHESRLLFVCTGRLYMPQL 228 ++E YE +Q N + E+G S + ++ +C R P Sbjct 168 KEETMEEKQQRVSKYESMQICSALLPNNSDRLESGDVSSESS-DNGPCVMCVARRIPP-- 224 Query 229 VRDVSLVDTIRSEFTSRHSLEWKFLFLD--HRAPPIIGYLPFEVLGTSGYDYYHFDDLEK 286 + + T +FT + K + +D + P YL E++GT+ D H DL K Sbjct 225 --NEKPIGTPIEQFTVKLDTTGKIIAVDVIWLSSPYSEYLSKELIGTAIKDLCHPHDLNK 282 Query 287 VVSCHEALMQKGELTSCYYRFLTKGQQWIWLQTRFYI-TYHQWNS-KPEFVVCTHRVVSY 344 + + +Q GE TS YR +++ +QT+ + + N+ +F++ T+ ++ Sbjct 283 LTAHLNDTLQVGESTSGVYRLRVSPDKFLNIQTKSKLFKANVMNTLVTDFIMATNTIIGD 342 Query 345 ADI 347 D+ Sbjct 343 NDL 345 > GB52077-PA pep:known chromosome_group:GCA_000002195.1:12:10499511:10512204:1 gene:GB52077 transcript:GB52077-RA description:"Period protein " Length=593 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/110 (32%), Positives = 59/110 (54%), Gaps = 8/110 (7%) Query 238 IRSEFTSRHSLEWKFLFLDHRAPPII---GYLPFEVLGTSGYDYYHFDDLEKVVSCHEAL 294 I S FT+RH+ +L H P ++ GYLP +++G S +D+YH +DL + +E + Sbjct 374 ISSVFTTRHNATC---YLSHVDPDVVQYFGYLPQDMVGRSLFDFYHPEDLPFIKDIYETV 430 Query 295 --MQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVV 342 ++ S YRF + ++ L+T + + W K EFVV HR++ Sbjct 431 IKLEGASFRSKPYRFGIQNGDYVVLETEWSSFINPWTKKLEFVVGQHRIL 480 Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust. Identities = 13/51 (25%), Positives = 26/51 (51%), Gaps = 0/51 (0%) Query 98 FVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLAFVDDRPNLYNILQ 148 F +A+ + +V V G+ P D++ +S+FD +D P + +I + Sbjct 378 FTTRHNATCYLSHVDPDVVQYFGYLPQDMVGRSLFDFYHPEDLPFIKDIYE 428 > GB52114-PA pep:known chromosome_group:GCA_000002195.1:12:11691370:11712997:1 gene:GB52114 transcript:GB52114-RA description:"Uncharacterized protein " Length=865 Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 69/147 (47%), Gaps = 10/147 (7%) Query 235 VDTIRSE---FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCH 291 V IR E F +R + +++ + R ++ Y E+ G + Y H +D ++ H Sbjct 286 VHEIRLETDMFVTRINFDFRIAHCEPRVSELLDYTADELTGKNLYTLCHGEDANRLRKSH 345 Query 292 EALMQKGELTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVS---YADII 348 L+ KG++ + YYR + K + WLQT + + N++ + ++C + V+S Y ++I Sbjct 346 IDLIHKGQVLTHYYRLMNKSGGYTWLQTCATVVCNSKNAEEQNIICVNYVISGREYENLI 405 Query 349 KSTKQERTETEESVRDCDHNGSSLKDP 375 Q EE V ++ DP Sbjct 406 MDCCQ----LEEGVMGVKREDAAGNDP 428 Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/147 (24%), Positives = 66/147 (45%), Gaps = 20/147 (14%) Query 12 KRRTRNLSEKKRRDQFNMLVNELGSMV---STNNRKMDKSTVLKSTISFLK--------- 59 K ++R+ + + RR + N EL M+ + ++DK+++++ TIS+LK Sbjct 14 KEKSRD-AARSRRGKENFEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLREFSGHGD 72 Query 60 ---NHNEITVRSRAHDVQEDWKPAFLSNEEFTYL----VLEALEGFVMVFSASGCIYYVS 112 N + A + + F +L++L+GF M +A G Y+S Sbjct 73 PPWNRDGPPPNKSGKGANRVRSSASAAMDHFDVHQGTHILQSLDGFAMAVAADGRFLYIS 132 Query 113 ESVTSLLGHTPGDIINKSIFDLAFVDD 139 E+V+ LG + ++ S+FD D Sbjct 133 ETVSIYLGLSQVEMTGSSVFDYVHQQD 159 > GB50615-PA pep:novel supercontig:GCA_000002195.1:GroupUn370:1029:2120:-1 gene:GB50615 transcript:GB50615-RA description:"Uncharacterized protein " Length=193 Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (11%) Query 18 LSEKKRRDQFNMLVNELGSMVST---NNRKMDKSTVLKSTISFLKNHNEITVRSRAHDVQ 74 ++EK+RRD N ++ + ++V T + RKMDK ++L+ +FL+ H + R Sbjct 1 MAEKQRRDNLNTNISAMAALVPTVAESPRKMDKISILRLAANFLRIHYTV---GRG---V 54 Query 75 EDWKPAFLSNEEFTYLVLEAL---EGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKS- 130 D+ P L + + + + L F +V + +G I YVS V LGHT + I K Sbjct 55 SDFLPRELGDLDLEQYIGDNLIKNGSFFIVVTTTGKIVYVSRQVQEHLGHTQVNFIIKRA 114 Query 131 --IFDLAFVDDRPNLYN 145 I + N+YN Sbjct 115 PFIPSTKIFTSKINVYN 131 > GB51105-PA pep:novel chromosome_group:GCA_000002195.1:10:9932581:9936387:-1 gene:GB51105 transcript:GB51105-RA Length=367 Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 5/54 (9%) Query 11 TKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNR-----KMDKSTVLKSTISFLK 59 +++R R + EKKRRD+ N + EL +V R K++K+ +L+ T+ L+ Sbjct 209 SRKRRRGMIEKKRRDRINASLGELRRLVPAAARDPHSGKLEKAEILQLTVEHLR 262 > GB45966-PA pep:novel chromosome_group:GCA_000002195.1:16:6079668:6085979:1 gene:GB45966 transcript:GB45966-RA Length=99 Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust. Identities = 15/41 (37%), Positives = 27/41 (66%), Gaps = 3/41 (7%) Query 18 LSEKKRRDQFNMLVNELGSMVSTNNR---KMDKSTVLKSTI 55 L+EK+RR+Q N+ ++EL ++S + K DK +L+ T+ Sbjct 52 LNEKRRRNQENLFIDELAELISATDMSSGKTDKCQILQRTV 92 > GB55498-PA pep:known chromosome_group:GCA_000002195.1:2:15432053:15440398:1 gene:GB55498 transcript:GB55498-RA description:"Uncharacterized protein " Length=273 Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust. Identities = 23/77 (30%), Positives = 43/77 (56%), Gaps = 11/77 (14%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMVSTNNR---------KMDKSTVLKSTISFL 58 KD K+ N+ E++RR N + ELG+++ N + +K T+LKS++ ++ Sbjct 65 KDRQKKDNHNMIERRRRFNINDRIKELGTLLPKTNDPYYEIVRDVRPNKGTILKSSVEYI 124 Query 59 K-NHNEITVRSRAHDVQ 74 K NE+T R + ++V+ Sbjct 125 KLLKNELT-RMKQNEVR 140 > GB53417-PA pep:novel chromosome_group:GCA_000002195.1:9:10216873:10219147:1 gene:GB53417 transcript:GB53417-RA description:"Uncharacterized protein " Length=276 Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust. Identities = 12/31 (39%), Positives = 21/31 (68%), Gaps = 0/31 (0%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMV 38 +DD +R T N E++RRD+ N + +LG ++ Sbjct 154 RDDRRRATHNEVERRRRDKINNWIAKLGKII 184 > GB52827-PA pep:novel chromosome_group:GCA_000002195.1:8:9161336:9209533:1 gene:GB52827 transcript:GB52827-RA Length=499 Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 23/38 (61%), Gaps = 5/38 (13%) Query 503 LPLSLPPIPVIVAQDQAQLQLQRTHRELQQMIVRQQEE 540 LP+ +PPIPVI+ Q +L+ E Q + R++EE Sbjct 341 LPVGVPPIPVIIDQ-----KLENHDEEKQDEVARKKEE 373 > GB42192-PA pep:novel chromosome_group:GCA_000002195.1:1:1345270:1347149:1 gene:GB42192 transcript:GB42192-RA description:"Uncharacterized protein " Length=299 Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Query 550 FARLGILQPVINVQDPFTNPEQMPNRSSIMYDGNRQLSYPQT 591 F + G LQ VI+ D N +P+R+ I+ GN +LS+ T Sbjct 73 FTKCGSLQEVIDFNDWIGN---LPHRNKIVIAGNHELSFDPT 111 > GB55781-PA pep:known chromosome_group:GCA_000002195.1:3:4907623:4997869:-1 gene:GB55781 transcript:GB55781-RA Length=18830 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 26/110 (24%), Positives = 45/110 (41%), Gaps = 2/110 (2%) Query 370 SSLKDPSTEDAMVPVSPSYMSEASDAFATSYNSMSKLASVKSAATSGSTSATVATLGTAI 429 +++ STE + V+ + E S T+ S+ T +TS T++ Sbjct 3917 TTISYSSTESTTLTVAETSTVEESTPTFTTSESILPTTMAHDRGTITTTSVESMETTTSL 3976 Query 430 TTASATWPPRSSYLLYTTGSDTTSVS--GGSRSSQRNSSQELQRLPEPAL 477 +T + + + G +TTSVS G+ + EL RLPE + Sbjct 3977 STVKDIFETTTEVVPTVGGIETTSVSYTYGTEYISTSEMTELSRLPETTI 4026 > GB49989-PA pep:novel chromosome_group:GCA_000002195.1:15:8334765:8334989:-1 gene:GB49989 transcript:GB49989-RA description:"Uncharacterized protein " Length=74 Score = 27.7 bits (60), Expect = 2.5, Method: Composition-based stats. Identities = 18/83 (22%), Positives = 35/83 (42%), Gaps = 15/83 (18%) Query 518 QAQLQLQRTHRELQQMIVRQQEELRQVKEQLLFARLGILQPVINVQDPFTNPEQMPNRSS 577 Q L+ ++HRE +++ + +EEL+ + E L + N ++M Sbjct 3 QYVLEQAKSHRETSEVLCKAREELKNLAETYLC---------------YLNSQRMCKEIK 47 Query 578 IMYDGNRQLSYPQTSHQQNHNMP 600 I Y G + S +T+ +P Sbjct 48 IRYAGKGERSIKETADLVGFKLP 70 > GB47799-PA pep:known chromosome_group:GCA_000002195.1:13:7060851:7064058:1 gene:GB47799 transcript:GB47799-RA description:"Uncharacterized protein " Length=363 Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust. Identities = 13/57 (23%), Positives = 32/57 (56%), Gaps = 7/57 (12%) Query 10 DTKRRTRNLSEKKRRDQFNMLVNELGSMV-------STNNRKMDKSTVLKSTISFLK 59 + +R + + EK+RR + N +N+L +++ + K++K+ +L+ T+ L+ Sbjct 48 ENRRSNKPIMEKRRRARINNCLNDLKTLILDAMKKDPARHSKLEKADILEMTVKHLE 104 > GB40634-PA pep:known chromosome_group:GCA_000002195.1:12:6134060:6139118:1 gene:GB40634 transcript:GB40634-RA description:"Uncharacterized protein " Length=256 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 11/31 (35%), Positives = 22/31 (71%), Gaps = 0/31 (0%) Query 8 KDDTKRRTRNLSEKKRRDQFNMLVNELGSMV 38 +D+ +R T N E++RRD+ N +++LG ++ Sbjct 139 RDERRRVTHNEVERRRRDKINNWISKLGKLL 169 > GB41671-PA pep:known chromosome_group:GCA_000002195.1:14:8715471:8720666:1 gene:GB41671 transcript:GB41671-RA description:"Uncharacterized protein " Length=1169 Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust. Identities = 15/46 (33%), Positives = 21/46 (46%), Gaps = 0/46 (0%) Query 90 LVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDIINKSIFDLA 135 L+ +A V VF A CIYY+ LLG G + +D+ Sbjct 253 LIRQATYKSVAVFIAISCIYYIIPLAEYLLGFVMGIFMTIIFYDIV 298 > GB52667-PA pep:novel supercontig:GCA_000002195.1:GroupUn125:19667:27550:1 gene:GB52667 transcript:GB52667-RA Length=597 Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust. Identities = 41/189 (22%), Positives = 67/189 (35%), Gaps = 34/189 (18%) Query 327 QWNSKPEFVVCTHRVVSYADIIKSTKQERTETEESVRDCDH--NGSS------------- 371 ++NSK E ++ + DI+K TK +T + D D N S Sbjct 336 KYNSKNEIDDYSNIINEENDILKLTKNNTNKTLNTENDNDELKNKSIMSRILRTIAEYFD 395 Query 372 ---LKDPSTEDAMVPVSPSYMSEASDAFATSYNSMSKLASVKSAATSGSTSATVATLGTA 428 LKDP + M+ +S + +E + + T + S K A ST A+V + Sbjct 396 LDLLKDPGYVNLMLGMSVAVFAEMNFSQLTPFILTDMNISTKQIAYIMSTIASVDLIFRI 455 Query 429 ITTASATW---PPRSSY-------------LLYTTGSDTTSVSGGSRSSQRNSSQELQRL 472 + W PP+ Y LL+ G + + + + L Sbjct 456 LAPFIGEWFNQPPKIMYMMSLCLLIISRTSLLFINGFASLLIVASGLGAAKGIRSIYMSL 515 Query 473 PEPALVPQH 481 P+ VP H Sbjct 516 VIPSYVPIH 524 > GB42977-PA pep:known chromosome_group:GCA_000002195.1:6:13630050:13638078:1 gene:GB42977 transcript:GB42977-RA description:"DNA polymerase " Length=1105 Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust. Identities = 20/65 (31%), Positives = 34/65 (52%), Gaps = 5/65 (8%) Query 450 DTTSVSGGSRSSQRNSSQELQRLPEPALVPQH-GIGAQYLEPAPYVGAVGVPAVLPLSLP 508 + TS +G Q N+S + R P P L PQ + Q +E Y G + +P + ++P Sbjct 62 NKTSKAG---PEQENTSSKWSRPPPPELNPQKDALIFQQIEIDHYSG-IPLPGMPGSNMP 117 Query 509 PIPVI 513 P+P++ Sbjct 118 PVPIM 122 Lambda K H a alpha 0.317 0.131 0.385 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2445472753 Database: Apis_mellifera.GCA_000002195.1.24_edited.pep.all.fa Posted date: Jan 15, 2015 11:02 AM Number of letters in database: 6,447,461 Number of sequences in database: 15,314 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40