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There were only a few problems during the internship:
- The diverse data sources proved to be a hard problem as many conversion operations were needed
A possible solution for this may be the using of script libraries like Bioperl or unified datasources like BioSQL, but this was far out of scope for this internship.
- The genome data may not be reliable. This applies for all genomic data from databases used here.
- Also getting usable domain information for all presented RS proteins proved to be hard.
Rene Ploetz
2009-06-05