| Sequence ID | Banth.0 |
|---|---|
| Location | 150,188 – 150,308 |
| Length | 120 |
| Max. P | 0.907956 |
| Location | 150,188 – 150,308 |
|---|---|
| Length | 120 |
| Sequences | 6 |
| Columns | 120 |
| Reading direction | forward |
| Mean pairwise identity | 86.22 |
| Mean single sequence MFE | -46.72 |
| Consensus MFE | -46.12 |
| Energy contribution | -42.02 |
| Covariance contribution | -4.10 |
| Combinations/Pair | 1.34 |
| Mean z-score | -1.43 |
| Structure conservation index | 0.99 |
| SVM decision value | 1.06 |
| SVM RNA-class probability | 0.907956 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>Banth.0 150188 120 + 5227293/0-120 AGUCUGGUAAUGAUGGCAGAGAGGUCACACCCGUUCCCAUACCGAACACGGAAGUUAAGCUCUCUAGCGCCGAUGGUAGUUGGGACCUUGUCCCUGUGAGAGUAGGACGUUGCCAGGCUA ((((((((((((((((..(((.((......)).))))))).((....((....))...((((((.((((((...))).)))(((((...)))))...)))))).)).)))))))))))). ( -43.50) >Bcere.0 150194 120 + 5224283/0-120 AGUCUGGUAAUGAUGGCAGAGAGGUCACACCCGUUCCCAUACCGAACACGGAAGUUAAGCUCUCUAGCGCCGAUGGUAGUUGGGACCUUGUCCCUGUGAGAGUAGGACGUUGCCAGGCUA ((((((((((((((((..(((.((......)).))))))).((....((....))...((((((.((((((...))).)))(((((...)))))...)))))).)).)))))))))))). ( -43.50) >Bsubt.0 1041645 120 - 4214630/0-120 UGUUUGGUGGCGAUAGCGAAGAGGUCACACCCGUUCCCAUACCGAACACGGAAGUUAAGCUCUUCAGCGCCGAUGGUAGUCGGGGGUUUCCCCCUGUGAGAGUAGGACGCCGCCAAGCAA ((((((((((((...((((((((.........((((.......))))((....))....)))))).)).(((((....)))(((((...)))))..........)).)))))))))))). ( -48.60) >Blich.0 1104120 120 - 4222334/0-120 AGUUUGGUGGCGAUAGCGAAGAGGUCACACCCGUUCCCAUGCCGAACACGGAAGUUAAGCUCUUCAGCGCCGAUGGUAGUUGGGGGCUUCCCCCUGUGAGAGUAGGACGCCGCCAAGCGC .(((((((((((...((((((((.........((((.......))))((....))....)))))).)).((..........(((((...)))))..........)).))))))))))).. ( -46.85) >Bhalo.0 267400 120 + 4202352/0-120 GGUUUGGUGGCGAUAGCGAAGAGGCCACACCCGUUCCCAUGCCGAACACGGUCGUUAAGCUCUUCAGCGCCGAUGGUAGUUGGGGGCUUCCCCCUGCGAGAGUAGGACGCUGCCAAGCAA .((((((..(((........((((((...(((((((.......))))((.((((....(((....)))..)))).))....)))))))))..(((((....))))).)))..)))))).. ( -51.00) >Bclau.0 223375 120 + 4303871/0-120 AGUCCGGUGACAAUGGCAAAGAGGUCACACCCGUUCCCAUGCCGAACACGGCCGUUAAGCUCUUUUGCGCCGAUGGUAGUUGGAGGCUUCCUCCCGCGAGAGUAGGACGUUGCCGGGCUU (((((((..((.((((....(.((.....)))....))))((((....)))).(((..((((((....(((...))).((.(((((...))))).))))))))..)))))..))))))). ( -46.90) >consensus AGUCUGGUGACGAUAGCAAAGAGGUCACACCCGUUCCCAUACCGAACACGGAAGUUAAGCUCUUCAGCGCCGAUGGUAGUUGGGGGCUUCCCCCUGUGAGAGUAGGACGCUGCCAAGCUA .(((((((((((...((((((((.........((((.......))))((....))....)))))).)).((.((....(..(((((...)))))..)....)).)).))))))))))).. (-46.12 = -42.02 + -4.10)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Thu Apr 6 17:18:33 2006