| Sequence ID | Banth.0 |
|---|---|
| Location | 120,748 – 120,867 |
| Length | 119 |
| Max. P | 0.849880 |
| Location | 120,748 – 120,867 |
|---|---|
| Length | 119 |
| Sequences | 6 |
| Columns | 120 |
| Reading direction | forward |
| Mean pairwise identity | 62.57 |
| Mean single sequence MFE | -31.42 |
| Consensus MFE | -7.07 |
| Energy contribution | -7.18 |
| Covariance contribution | 0.11 |
| Combinations/Pair | 1.23 |
| Mean z-score | -2.68 |
| Structure conservation index | 0.23 |
| SVM decision value | 0.78 |
| SVM RNA-class probability | 0.849880 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>Banth.0 120748 119 + 5227293/0-120 AUAAUAGCAAAAGUAGAGAAAAGCAGAUGCAAACAAAAAGAUGCUUGCAUCUAGACGAAUAACAUUGUAUAAUAGACAAUGUUGGUCUUUGACUGCGAUG-AAGUGGAAGGUUGCUGACA ....((((((...((((((.....((((((((.((......)).)))))))).......(((((((((.......))))))))).)))))).(..(....-..)..)....))))))... ( -30.90) >Bcere.0 120751 119 + 5224283/0-120 AUAAUAGCAAAAGUAGAGAAAAGCAGAUGCAAACAAAAAGAUGCUUGCAUCUAGACGAAUAACAUUGUAUAAUAGACAAUGUUGGUCUUUGACUGCGAUG-AAGUGGAAGGUUGCUGACA ....((((((...((((((.....((((((((.((......)).)))))))).......(((((((((.......))))))))).)))))).(..(....-..)..)....))))))... ( -30.90) >Bhalo.0 168542 119 + 4202352/0-120 UCAGCAUUUAUAAUAGAAAAAGUGUGACCAACGCAUAUUUACACUUGCUUUGGUUUUUUUCGUUGUGUAUAAUAUUGAAUGUUGGUCAUUGACAGCGAUG-AUGUGGAAGGUUGCUGACA ((((((..((((((.((((((....((((((.(((..........))).)))))))))))))))))).................(((((((....)))))-)).........)))))).. ( -27.60) >Bsubt.0 135151 118 + 4214630/0-120 AUAAUAAAAAAAGU-GUGCAAAUGAUGCAUAUUUUAAAUAAGUCUUGCAACAUGCGCCUAUUUUCUGUAUAAUGGUGUAUGUUGGUCUUUGACUGCGAUG-AAGUGAGAGGUUGCUGACA .........(((((-(((((.....))))))))))......(((..((((((((((((.(((........)))))))))))))(..((((.(((......-.))).))))..))).))). ( -34.50) >Blich.0 133256 120 + 4222334/0-120 AUAAUAAAAAAAGUGUGCAAAAGCCGGUAAUAUUCAAUAUUACCUUGCAACAUGCCUAUAAAUUUUGUAUAAUAGUGCAUGUUGGUCUUUGACUGCGAUGGAAGUGAGAGGUUGCUGACA ............((..((((.....((((((((...))))))))...((((((((((((............)))).)))))))).(((((.(((........))).)))))))))..)). ( -30.50) >Bclau.0 182325 119 + 4303871/0-120 UAAAUCUAUAUAAUAGUAGAAGUGUGCCCGAUGGUUACGUUUCAUGCCUAGGAGAAAGGUAGGAAACGGUUAUUUUCGUGUUUGCACGUUGACAGCGAUG-AUGCGGAAGGUUGCUGACA ....(((((......))))).((((((.(((..((..((((((.(((((.......))))).))))))...))..))).))..)))).....(((((((.-...(....))))))))... ( -34.10) >consensus AUAAUAAAAAAAGUAGAGAAAAGCAGACAAAAACAAAAAUAUCCUUGCAACAAGACGAUUAAUAUUGUAUAAUAGUCAAUGUUGGUCUUUGACUGCGAUG_AAGUGGAAGGUUGCUGACA ................................................................................((((((((((.(((........))).))))...)))))). ( -7.07 = -7.18 + 0.11)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Thu Apr 6 17:17:48 2006