| Sequence ID | Banth.0 |
|---|---|
| Location | 4,953,330 – 4,953,449 |
| Length | 119 |
| Max. P | 0.721408 |
| Location | 4,953,330 – 4,953,449 |
|---|---|
| Length | 119 |
| Sequences | 5 |
| Columns | 120 |
| Reading direction | reverse |
| Mean pairwise identity | 61.38 |
| Mean single sequence MFE | -35.42 |
| Consensus MFE | -10.52 |
| Energy contribution | -9.88 |
| Covariance contribution | -0.64 |
| Combinations/Pair | 1.27 |
| Mean z-score | -2.53 |
| Structure conservation index | 0.30 |
| SVM decision value | 0.40 |
| SVM RNA-class probability | 0.721408 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>Banth.0 4953330 119 + 5227293/0-120 ACUUCUUAACCCUUUGGACCUGAUCUGGCUCGUACCAGCGUAGGGAAGUUAACGGCUUUACAUAAUGAUGUC-UUUAUGAGCCAGGUCCUUAUUUUUUUAUGGACCUGGCUCUUUUUAUU (((((....((....)).((((..((((......))))..)))))))))....(((.(((.....))).)))-.....(((((((((((.((......)).)))))))))))........ ( -38.50) >Bcere.0 4930746 120 + 5224283/0-120 ACUUCUUAACCCUUUGGACCUGAUCUGGCUCGUACCAGCGUAGGGAAGUUAACGGCUUUACAUAAUGAUGUCUUUUAUGAGCCAGGUCCUUAUUUUUUUAUGGACCUGGCUCUUUUUAUU (((((....((....)).((((..((((......))))..)))))))))....(((.(((.....))).)))......(((((((((((.((......)).)))))))))))........ ( -38.50) >Bhalo.0 2682661 112 - 4202352/0-120 GUUCCUUUUACCCUCAUACCUGAUCUGGAUCAUGCCAGCGUAGGGAAGUCGACUGC---ACGUGACGAUC---AUCAUGGGU--AGCCGGCAUCCUUAUGGAUGGCUGGCUUUUUUUAUU ........(((((.....((((..((((......))))..))))((.(((.((...---..)))))..))---.....))))--)((((((((((....)))).)))))).......... ( -36.80) >Bsubt.0 3259455 107 - 4214630/0-120 GCUUCUUAACCCUUUGGACCUGAUCUGGUUCGUACCAGCGUGGGGAAGU-AGAGGAAUU--------GUUUUUGUUAUUGUCUUGCUGGGCAAUAAUAUGUU--UCUUUCUGACUGU--A ((((((..((.((.((((((......))))))....)).))..))))))-((((((((.--------.....(((((((((((....))))))))))).)))--)))))........--. ( -29.80) >Blich.0 3280395 120 - 4222334/0-120 GUUUCUUAACCCUUUGGACCUGAUCUGGUUCGUACCAGCGUGGGGAAGUAAAAAGGAUUCGAGAGAAGAUGGGGAAUGGGUAUGGUCCGUCUGUCUUCUAGCGAUUUUACUGACUGUAAA ..........(((((...(((.(((((((....))))).)).)))......)))))..(((..(((((((((...(((((.....))))))))))))))..))).(((((.....))))) ( -33.50) >consensus GCUUCUUAACCCUUUGGACCUGAUCUGGCUCGUACCAGCGUAGGGAAGUUAACGGCAUUACAUAAUGAUGUC_GUUAUGGGCCAGGUCGUCAUUCUUAUAUGGACCUGGCUCUUUUUAUU (((((....((....)).((((..((((......))))..)))))))))....................................................................... (-10.52 = -9.88 + -0.64)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Thu Apr 6 17:16:41 2006