| Sequence ID | sy_sapro.tRNA |
|---|---|
| Location | 690,503 – 690,560 |
| Length | 57 |
| Max. P | 0.865191 |
| Location | 690,503 – 690,560 |
|---|---|
| Length | 57 |
| Sequences | 3 |
| Columns | 57 |
| Reading direction | reverse |
| Mean pairwise identity | 98.83 |
| Mean single sequence MFE | -17.30 |
| Consensus MFE | -17.30 |
| Energy contribution | -17.30 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.86 |
| Structure conservation index | 1.00 |
| SVM decision value | 0.85 |
| SVM RNA-class probability | 0.865191 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>sy_sapro.tRNA 690503 57 - 2516583 AGGUAGGACUCGAACCUACGACCGAUCGGUUAACAGCCGAUAGCUCUACCACUGAGC ..(((((.......))))).....((((((.....)))))).((((.......)))) ( -17.30) >sy_haemo.tRNA 884858 57 - 2685023 AGGUAGGAUUCGAACCUACGACCGAUCGGUUAACAGCCGAUAGCUCUACCACUGAGC ..(((((.......))))).....((((((.....)))))).((((.......)))) ( -17.30) >sy_aureus.tRNA 580948 57 - 2809430 AGGUAGGACUCGAACCUACGACCGAUCGGUUAACAGCCGAUAGCUCUACCACUGAGC ..(((((.......))))).....((((((.....)))))).((((.......)))) ( -17.30) >consensus AGGUAGGACUCGAACCUACGACCGAUCGGUUAACAGCCGAUAGCUCUACCACUGAGC ..(((((.......))))).....((((((.....)))))).((((.......)))) (-17.30 = -17.30 + 0.00) # Strand winner: forward (0.83)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Fri Apr 7 15:52:36 2006