| Sequence ID | sy_aureus.rRNA |
|---|---|
| Location | 572,453 – 572,536 |
| Length | 83 |
| Max. P | 0.997810 |
| Location | 572,453 – 572,536 |
|---|---|
| Length | 83 |
| Sequences | 2 |
| Columns | 83 |
| Reading direction | reverse |
| Mean pairwise identity | 68.67 |
| Mean single sequence MFE | -20.20 |
| Consensus MFE | -20.10 |
| Energy contribution | -18.10 |
| Covariance contribution | -2.00 |
| Combinations/Pair | 1.33 |
| Mean z-score | -0.20 |
| Structure conservation index | 1.00 |
| SVM decision value | 2.94 |
| SVM RNA-class probability | 0.997810 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>sy_aureus.rRNA 572453 83 - 2809430 CGACUACCAUCGACGCUAAGGAGCUUAACUUCUGUGUUCGGCAUGGGAACAGGUGUGACCUCCUUGCUAUAGUCACCAGACAA .(((((.....(((((..(((((.....)))))))))).((((.((((...((.....)))))))))).)))))......... ( -20.80) >sp_mutans.rRNA 21899 83 - 2030929 CAACUACUUCAGGCGUGCUAGGGCUUAACUGCUGUGUUCGGCAUGGAUACAGGUGUCUCCCCUAGGCUAUCAUCACUUAACAA ...........(((...((((((....((..((((((((.....))))))))..))...)))))))))............... ( -19.60) >consensus CAACUACCACAGACGCGAAAGAGCUUAACUGCUGUGUUCGGCAUGGAAACAGGUGUCACCCCCAGGCUAUAAUCACCAAACAA ..............((.((((((....((..((((((((.....))))))))..))...))))))))................ (-20.10 = -18.10 + -2.00) # Strand winner: reverse (0.95)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Fri Apr 7 15:51:20 2006