| Sequence ID | sy_aureus.tRNA |
|---|---|
| Location | 574,434 – 574,493 |
| Length | 59 |
| Max. P | 0.678331 |
| Location | 574,434 – 574,493 |
|---|---|
| Length | 59 |
| Sequences | 3 |
| Columns | 59 |
| Reading direction | reverse |
| Mean pairwise identity | 98.87 |
| Mean single sequence MFE | -16.50 |
| Consensus MFE | -16.50 |
| Energy contribution | -16.50 |
| Covariance contribution | 0.00 |
| Combinations/Pair | 1.00 |
| Mean z-score | -1.52 |
| Structure conservation index | 1.00 |
| SVM decision value | 0.30 |
| SVM RNA-class probability | 0.678331 |
| Prediction | RNA |
Download alignment: ClustalW | MAF
>sy_aureus.tRNA 574434 59 - 2809430 AGUGGACUCGAACCACCGACCUCACGCUUAUCAGGCGUGCGCUCUAACCAGCUGAGCUA .((((.......))))......((((((.....)))))).((((.........)))).. ( -16.50) >sp_agal.tRNA 96574 59 - 2160275 AGUGGACUCGAACCACCGACCUCACGCUUAUCAGGCGUGCGCUCUAACCACCUGAGCUA .((((.......))))......((((((.....)))))).((((.........)))).. ( -16.50) >sp_pneumo.tRNA 187047 59 - 2038623 AGUGGACUCGAACCACCGACCUCACGCUUAUCAGGCGUGCGCUCUAACCACCUGAGCUA .((((.......))))......((((((.....)))))).((((.........)))).. ( -16.50) >consensus AGUGGACUCGAACCACCGACCUCACGCUUAUCAGGCGUGCGCUCUAACCACCUGAGCUA .((((.......))))......((((((.....)))))).((((.........)))).. (-16.50 = -16.50 + 0.00) # Strand winner: forward (0.98)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Fri Apr 7 15:51:10 2006