| Sequence ID | nosto.0 |
|---|---|
| Location | 115,893 – 115,939 |
| Length | 46 |
| Max. P | 0.625602 |
| Location | 115,893 – 115,939 |
|---|---|
| Length | 46 |
| Sequences | 5 |
| Columns | 46 |
| Reading direction | reverse |
| Mean pairwise identity | 83.48 |
| Mean single sequence MFE | -16.92 |
| Consensus MFE | -9.34 |
| Energy contribution | -9.02 |
| Covariance contribution | -0.32 |
| Combinations/Pair | 1.20 |
| Mean z-score | -2.27 |
| Structure conservation index | 0.55 |
| SVM decision value | 0.19 |
| SVM RNA-class probability | 0.625602 |
| Prediction | RNA |
| WARNING | Sequence 1 too short. |
| WARNING | Sequence 2 too short. |
| WARNING | Sequence 3 too short. |
| WARNING | Sequence 4 too short. |
| WARNING | Sequence 5 too short. |
Download alignment: ClustalW | MAF
>nosto.0 115893 46 + 6413771 AUCGGGAUGACAGGAUUUGAACCUGCGGCAUCCUGCUCCCAAAGCA ...((((.(.(((((((((......))).)))))))))))...... ( -15.20) >anava.0 1828029 46 + 6365727 AUCGGGAUGACAGGAUUUGAACCUGCGGCAUCCUGCUCCCAAAGCA ...((((.(.(((((((((......))).)))))))))))...... ( -15.20) >proch.0 1054673 46 + 1709204 GUCGGGGCGACAGGAUUCGAACCUGCGACCUAGUGCUCCCAAAGCA ...((((((..(((..(((......))))))..))).)))...... ( -14.20) >synel.0 1295326 46 - 2696255 AUCGGGAUGACAGGAUUCGAACCUGCGACCCCUUCGUCCCGAACGA .(((((((((.(((..(((......)))..)))))))))))).... ( -21.30) >gloev.0 3903920 46 + 4659019 AUCGGGAUGACAGGAUUCGAACCUGCGACCUCUUCGUCCCGAACGA .(((((((((.(((..(((......)))..)))))))))))).... ( -18.70) >consensus AUCGGGAUGACAGGAUUCGAACCUGCGACCUCCUGCUCCCAAAGCA ...((((((.((((.......)))))).........))))...... ( -9.34 = -9.02 + -0.32)
Generated by rnazCluster.pl (part of RNAz $RNAz::rnazVersion) on Wed Apr 19 19:58:17 2006