AF033810. Fujinami sarcomama virus LOCUS AF033810 4788 bp RNA linear VRL 03-DEC-1998 DEFINITION Fujinami sarcoma virus, complete genome. ACCESSION AF033810 VERSION AF033810.1 GI:2801466 KEYWORDS . SOURCE Fujinami sarcoma virus ORGANISM Fujinami sarcoma virus Viruses; Retroid viruses; Retroviridae; Alpharetrovirus. REFERENCE 1 (bases 1 to 4788) AUTHORS Petropoulos,C.J. TITLE Appendix 2: Retroviral taxonomy, protein structure, sequences, and genetic maps JOURNAL (in) Coffin,J.M. (Ed.); RETROVIRUSES: 757; Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, NY, USA (1997) REFERENCE 2 (bases 1 to 4788) AUTHORS Chappey,C. TITLE Direct Submission JOURNAL Submitted (12-NOV-1997) NIH, NLM, Rockville Pike, Bethesda, MD 20894, USA FEATURES Location/Qualifiers source 1..4788 /organism="Fujinami sarcoma virus" /mol_type="genomic RNA" /db_xref="taxon:11885" mRNA 22..4442 /product="p140 polyprotein" 5'UTR 22..102 CDS 380..3928 /codon_start=1 /product="p140 polyprotein" /protein_id="AAC82565.1" /db_xref="GI:2801467" /translation="MEAVIKVISSACKTYCGKTSPSKKEIGAMLSQLQKEGLLMSLSD LYSPGSWDPITAALTQRAMVLGKSGELKTWGLVLGALKAAREEQVTSEQAKFWLGLGG GRVSPPGPECIEKPATERRIDKGETTVQRDTKMAPEETATPKTVGTSCYHCGTAIGCN CATASAPPPPYVGSGLYPSLAGVGEQQGQGGDTPRGAEQPRAEPGRTGLAPGPALTDW ARIREELASTGPPMVAMPVVIKTEGPAWTPLEPKLIAGLAGAVGAGGLRSPIAVAGVE ALMSSPLLPHDVTNPMRVILGPAPHALWMDAWAASGQLHRPQPQEHTSTSAAAGTWRL TQASESRHRLPHCSAAPSHQDHSAMGFGPELWCPKGHTELLRLQDSELRLLELMKKWM SQRAKSDREYAGMLHHMFSQLEKQEGLGHLRATDHSSQIGESWWVLASQTETLSQTLR RHAEELAAGPLAKLSILIRDKQQLRKVFSEQWQQLSQEYAWTTQQEVEKLKAQYRSLV RDSTQAKRKYQEASKDKEREKAKEKYVRSLSKLYALHNQYVLAVQAAALHHHHHYQRA LPTLHESLYSLQQEMVLVLKEILGEYCSITSLVQEDVLAIHQKVAHAVEMIDPATEYS SFVQCHRYDSEVPPAVTFDESLLEEAENLEPGELQLNELTIESVQHSLTSIEEELLAS RKAVSSKEQRVWELQVELRGEELALSPGERVHLLGKRQGLREAQQQLQGLVCAQAKLQ AQRDMLANKLAELGSEEPPPALPLQEDRQSARSTDQERSGVTALKTIKNHISGIFSPR FSLPPPVPLIPEVQKPLCQQAWYHGAIPRSEVQELLKYSGDFLVRESQGKQEYVLSVL WDGQPRHFIIQAADNLYRLEDDGLPTIPLLIDHLLQSQRPITRKSGIVLTRAVLKDKW VLNHEDVLLGERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPELKAKFLQEARILK QCNHPNIVRLIGVCTQKQPIYIVMELVQGGDFLSFLRSKGPRLKMKKLIKMMENAAAG MEYLESKHCIHRDLAARNCLVTEKNTLKISDFGMSRQEEDGVYASTGGMKQIPVKWTA PEALNYGWYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLEPPEQCP EDVYRLMQRCWEYDPHRRPSFGAVHQDLIAIRKRHR" mat_peptide 380..835 /product="p14 MA" mat_peptide 899..1087 /product="p10" mat_peptide 1085..1309 /product="CA" mat_peptide 1307..3925 /product="FBS" 3'UTR 4196..4442 ORIGIN 1 gccattttac cattcaccac attggtgtgc acctgggtag atggacagac cgttgagtcc 61 ctaacgattg cgaacacctg aatgaagcgg aaggcttcat ttggtgaccc cgacgtgatc 121 gttagggaat agtggtcggc cacaggcggc gtggcgatcc tgccctcatc cgtctcgctt 181 aatcggggag cggacgatga ccctagcaga gggggctgcg gcttaggagg gcagaagctg 241 agtgacgtcg gagggagctc cacggccggg ggccaagata acctaccgag aactcagaga 301 gtcgttggaa gacgggaagg aagcccaacg actgagcagt ccaccccagg cgtgattctg 361 gtcgcccggt ggatcaagca tggaagccgt cataaaggtg atttcgtccg cgtgtaaaac 421 ctattgcggg aaaacctctc cttctaagaa ggaaataggg gccatgttgt cccagttaca 481 aaaggaaggg ttgcttatgt ccctctcaga cttatattcc ccggggtcct gggatcccat 541 taccgcggca ctcacacagc gggcgatggt acttgggaaa tcgggagagt taaaaacctg 601 gggattggtt ttgggggcat tgaaggcggc ccgagaggaa caggttacat ctgagcaagc 661 aaagttttgg ttgggattag ggggagggag ggtctctccc ccaggtccgg agtgcatcga 721 gaaaccagca acggagcggc gaatcgacaa gggagaaaca actgtgcagc gagatacgaa 781 gatggcgccg gaggaaacgg ccacacctaa aaccgttggc acatcctgct atcattgcgg 841 aacagctatt ggctgtaatt gcgccacagc ctcggctcct cctcctcctt atgtggggag 901 tggtttgtat ccttccctgg cgggggtggg agagcagcag ggccaggggg gtgacacacc 961 tcggggggcg gaacagccaa gggcggagcc agggcgcacg ggtctggccc ctgggccggc 1021 cctgactgac tgggcaagga ttagggagga gcttgcgagt acaggtccgc ccatggtggc 1081 catgcctgta gtgattaaga cagagggacc cgcctggacc cctctggagc caaaattgat 1141 cgcaggacta gctggtgcgg tcggggccgg gggcttgcga tctccgatcg ctgtggcagg 1201 ggtggaggcg cttatgtcct ccccgctgct gccgcatgac gtcacgaatc caatgagagt 1261 tattttagga cccgccccac atgccttatg gatggacgct tgggctgcgt caggtcagtt 1321 gcaccggccc caaccccagg aacacaccag caccagcgct gcagcgggga cctggcggct 1381 cactcaggct tcggagtcgc ggcacaggct gccccactgc tctgcagccc catcccacca 1441 ggatcacagt gccatgggct ttgggccgga gctgtggtgc ccgaaggggc acactgagct 1501 gctgcggctg caggacagcg agttgcgcct cctggagctg atgaagaagt ggatgtcaca 1561 gcgtgctaag agcgaccggg agtacgcggg gatgctgcac cacatgttct ctcagctgga 1621 gaaacaggag ggcctgggac atctccgtgc caccgaccac agcagccaga tcggggagtc 1681 gtggtgggtt ctggcaagcc agactgagac actgagccag acgctgcggc ggcacgcgga 1741 ggagctggca gcggggccgc tggccaagct gagcatactg atccgtgaca agcagcagct 1801 tcgcaaggtc ttcagtgagc agtggcagca gctcagccag gagtacgcct ggaccacaca 1861 gcaggaagtt gagaagctga aggcacagta ccgcagcctg gtgcgtgaca gcacccaggc 1921 caagcgcaag taccaggagg ccagcaaaga caaggagcgg gaaaaggcga aggaaaagta 1981 cgtgcgcagc ctgtcgaagc tctatgcctt gcacaaccag tacgtgctgg ctgtgcaggc 2041 ggctgcgttg caccaccacc atcactacca gcgtgctctg cccaccctgc acgagtccct 2101 ctacagcctg cagcaggaga tggtccttgt tttgaaggag attcttgggg agtactgtag 2161 catcaccagt ctggtgcagg aggacgtgct ggccatccac cagaaggttg cccacgccgt 2221 cgagatgatc gaccccgcca ctgagtacag cagctttgtt cagtgccaca ggtacgactc 2281 tgaggtacca ccggcagtga cctttgatga gagcttgctg gaggaggcag agaacctgga 2341 gccaggggag ctgcagctga atgagctgac catcgagagc gtgcaacact ccctgacatc 2401 cattgaggag gagctgttgg ccagcaggaa ggcagtgagc agcaaggagc agcgggtgtg 2461 ggagctgcag gttgagctgc ggggcgagga gctggcactc agccctgggg agcgggtgca 2521 cttgctgggc aagcggcagg ggctgcggga ggcccagcag cagctgcagg gcttggtctg 2581 tgctcaggcc aagctgcagg cacagcggga tatgctggcc aacaagctgg cagagctggg 2641 ctctgaggag ccccctcccg ccttgcccct gcaggaggac cggcagtcag cgcgctccac 2701 ggatcaggag cgcagtgggg tgactgcgct gaagaccatc aagaaccaca tctcgggcat 2761 cttcagtccc aggttctcgc tgccacctcc cgtgcccctc atcccggagg tgcagaagcc 2821 gctgtgccag caggcctggt accacggggc catcccgcgc tcggaggtgc aggagctgct 2881 gaaatacagc ggagacttcc tggtgcggga gagccagggg aagcaggagt atgtgctcag 2941 cgtgctgtgg gatgggcagc cccggcactt catcatccag gctgctgaca acctgtacag 3001 gctggaagac gatggccttc ccaccatccc gctgctcatc gaccacctgc tgcagagcca 3061 gcggcccatc acccgcaaga gcggcatcgt cctgaccaga gccgtgctca aggacaagtg 3121 ggtgctcaac catgaggacg tgctgctggg ggagcgcatt ggccggggga acttcgggga 3181 ggtgttcagc ggccgcctgc gtgctgacaa cacccccgtg gcggtgaaat cctgccggga 3241 aaccctgccg cccgagctga aggccaagtt cctgcaggaa gccaggatcc tcaagcagtg 3301 caaccatccc aacatcgtcc ggctcatcgg cgtctgcacc cagaagcagc ccatttacat 3361 cgtcatggag ctggtgcagg gaggggactt cctgagcttc ctgcgcagca aggggccccg 3421 cctgaagatg aagaagctga tcaagatgat ggagaatgcc gcggcgggca tggagtacct 3481 ggaaagcaag cactgcatcc acagggacct ggctgcccgc aactgcctgg tgacagaaaa 3541 gaacaccctg aaaatcagcg actttgggat gtcgcggcag gaggaggatg gtgtctatgc 3601 ctccacgggg ggcatgaagc agatccccgt gaaatggact gcccccgagg ctctgaatta 3661 cggctggtac agctcggaga gcgacgtgtg gagctttggg atcctgctgt gggaagcctt 3721 cagcctgggc gccgtgccct acgccaacct cagcaaccag cagacgcgcg aggccatcga 3781 gcagggcgtg cggctggagc ccccggagca gtgccccgag gacgtgtacc gcctgatgca 3841 gcgctgctgg gagtacgacc ctcacaggcg gccgagcttc ggcgccgtcc accaggacct 3901 catcgccatc cgcaaacggc accgctgagc ggctgcgccc gcccgggcgg cggggccgga 3961 gagcggcggg gccggaggcg cggagggccg cggtgcgctg ctgcgaaata aaagtcggct 4021 ctgcggaaat ttgactgaga ttaggctttt gcgctgtttc gcgatgtacg ggtcaggagt 4081 gagtagtata actgagggga ccatggtatg tataggcgct aggcggggct tcggttgtac 4141 gcggttaggg gtcccctcag gaagtagtaa atgcgctttc gcatagggag ggggagatgt 4201 tgccagttag tcatcattgc cacttagtca tcattacata agacagtcta aagtcctaaa 4261 aaggaaaaac aagacatctc ggatgtcatt ggctgcaacc agtaaggaag tagtggcgtg 4321 aggatcaccc gatgggtgta acccagaagg ccattggtgg cagctgatgt cgtgatatca 4381 ccttatgggc aaggctaaag ctgtgcataa ctatataagc cattgtaacc ttctaataaa 4441 cgccatttta ccattcacca cattggtgtg cacctgggta gatggacaga ccgttgagtc 4501 cctaacgatt gcgaacacct gaatgaagcg gaaggcttca ttgatgttgc cagttagtca 4561 tcattgccac ttagtcatca ttacataaga cagtctaaag tcctaaaaag gaaaaacaag 4621 acatctcgga tgtcattggc tgcaaccagt aaggaagtag tggcgtgagg atcacccgat 4681 gggtgtaacc cagaaggcca ttggtggcag ctgatgtcgt gatatcacct tatgggcaag 4741 gctaaagctg tgcataacta tataagccat tgtaaccttc taataaac //