# hmmsearch :: search profile(s) against a sequence database # HMMER 3.0 (March 2010); http://hmmer.org/ # Copyright (C) 2010 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: hmmermodlib/0050624.hmm # target sequence database: /u/praktikum/Downloads/Homo_sapiens.fasta # sequence reporting threshold: E-value <= 0.0001 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: 0050624 [M=41] Accession: 0050624 Description: C2H2 and C2HC zinc fingers Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.4e-28 96.3 27.5 4.1e-22 76.5 0.3 5.9 5 ENSP00000308759 pep:known chromosome:NCBI36:21:42280009:4230 1.4e-28 96.3 27.5 4.1e-22 76.5 0.3 5.9 5 ENSP00000381512 pep:known chromosome:NCBI36:21:42281815:4230 1.4e-28 96.3 27.5 4.1e-22 76.5 0.3 5.9 5 ENSP00000381523 pep:known chromosome:NCBI36:21:42280009:4230 1.6e-26 89.9 16.6 3.2e-22 76.8 0.3 3.9 3 ENSP00000381517 pep:known chromosome:NCBI36:21:42280009:4230 1.8e-11 43.9 16.6 34 6.4 0.0 10.2 10 ENSP00000342577 pep:novel chromosome:NCBI36:19:42059543:4206 2.2e-10 40.6 25.2 58 5.6 0.0 13.6 14 ENSP00000325864 pep:known chromosome:NCBI36:19:42033103:4206 2e-08 34.6 34.7 13 7.7 0.3 12.6 13 ENSP00000320347 pep:known chromosome:NCBI36:17:4922478:49403 6.2e-08 33.1 32.5 5.9 8.7 0.1 11.5 12 ENSP00000340711 pep:known chromosome:NCBI36:9:96080860:96103 6.4e-08 33.0 62.7 14 7.5 0.1 18.1 20 ENSP00000340524 pep:known chromosome:NCBI36:4:423777:483442: 1.2e-06 29.1 7.3 35 6.3 0.0 6.9 7 ENSP00000270459 pep:known chromosome:NCBI36:19:61290544:6132 1.6e-06 28.8 14.3 4.2 9.1 0.0 7.7 8 ENSP00000345765 pep:novel chromosome:NCBI36:X:152336975:1523 4.9e-06 27.3 32.0 8.6 8.2 0.0 11.5 12 ENSP00000339097 pep:known chromosome:NCBI36:9:96061399:96105 6.6e-06 26.9 40.6 19 7.1 0.1 12.5 12 ENSP00000375597 pep:known chromosome:NCBI36:19:60781423:6080 6.8e-06 26.8 32.1 8.9 8.1 0.0 11.5 12 ENSP00000378792 pep:known chromosome:NCBI36:9:96061399:96105 1.2e-05 26.0 23.3 1 11.0 0.1 8.2 9 ENSP00000328515 pep:known chromosome:NCBI36:8:144444971:1444 8.9e-05 23.4 21.6 6.6 8.5 0.1 8.5 9 ENSP00000379458 pep:known chromosome:NCBI36:19:62972837:6298 Domain annotation for each sequence (and alignments): >> ENSP00000308759 pep:known chromosome:NCBI36:21:42280009:42303535:-1 gene:ENSG00000173276 transcript:ENST00000310826 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 8.6 0.2 0.0021 6 2 29 .. 544 571 .. 543 576 .. 0.91 2 ? 4.9 1.1 0.035 1e+02 4 27 .. 575 598 .. 572 607 .. 0.85 3 ! 76.5 0.3 1.4e-25 4.1e-22 1 41 [] 772 812 .. 772 812 .. 0.98 4 ! 6.9 0.2 0.0075 22 2 23 .. 935 956 .. 934 969 .. 0.82 5 ! 15.9 0.6 9e-06 0.026 2 23 .. 1041 1062 .. 1040 1066 .] 0.88 Alignments for each domain: == domain 1 score: 8.6 bits; conditional E-value: 0.0021 0050624 2 kkltCleCmrtfkssfsiwrhqvevhnq 29 kk+ C C++ f+s+ + rh hn ENSP00000308759 544 KKFKCKHCLKIFRSTAGLHRHVNMYHNP 571 899******************9999986 PP == domain 2 score: 4.9 bits; conditional E-value: 0.035 0050624 4 ltCleCmrtfkssfsiwrhqvevh 27 C C + f ++f +w h h ENSP00000308759 575 YACDICHKRFHTNFKVWTHCQTQH 598 67999*************976655 PP == domain 3 score: 76.5 bits; conditional E-value: 1.4e-25 0050624 1 ykkltCleCmrtfkssfsiwrhqvevhnqnsmapkeglslp 41 ykkltCleCmrtfkssfsiwrhqvevhnqn+map+e++slp ENSP00000308759 772 YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTENFSLP 812 9*************************************997 PP == domain 4 score: 6.9 bits; conditional E-value: 0.0075 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k + C C + f+++f +w h ENSP00000308759 935 KPFICHVCNKAFRTNFRLWSHF 956 5678***************985 PP == domain 5 score: 15.9 bits; conditional E-value: 9e-06 0050624 2 kkltCleCmrtfkssfsiwrhq 23 +++ C C rtfk++fs+w h+ ENSP00000308759 1041 RQFMCKLCHRTFKTAFSLWSHE 1062 5688****************97 PP >> ENSP00000381512 pep:known chromosome:NCBI36:21:42281815:42303544:-1 gene:ENSG00000173276 transcript:ENST00000398499 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 8.6 0.2 0.0021 6 2 29 .. 544 571 .. 543 576 .. 0.91 2 ? 4.9 1.1 0.035 1e+02 4 27 .. 575 598 .. 572 607 .. 0.85 3 ! 76.5 0.3 1.4e-25 4.1e-22 1 41 [] 772 812 .. 772 812 .. 0.98 4 ! 6.9 0.2 0.0075 22 2 23 .. 935 956 .. 934 969 .. 0.82 5 ! 15.9 0.6 9e-06 0.026 2 23 .. 1041 1062 .. 1040 1066 .] 0.88 Alignments for each domain: == domain 1 score: 8.6 bits; conditional E-value: 0.0021 0050624 2 kkltCleCmrtfkssfsiwrhqvevhnq 29 kk+ C C++ f+s+ + rh hn ENSP00000381512 544 KKFKCKHCLKIFRSTAGLHRHVNMYHNP 571 899******************9999986 PP == domain 2 score: 4.9 bits; conditional E-value: 0.035 0050624 4 ltCleCmrtfkssfsiwrhqvevh 27 C C + f ++f +w h h ENSP00000381512 575 YACDICHKRFHTNFKVWTHCQTQH 598 67999*************976655 PP == domain 3 score: 76.5 bits; conditional E-value: 1.4e-25 0050624 1 ykkltCleCmrtfkssfsiwrhqvevhnqnsmapkeglslp 41 ykkltCleCmrtfkssfsiwrhqvevhnqn+map+e++slp ENSP00000381512 772 YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTENFSLP 812 9*************************************997 PP == domain 4 score: 6.9 bits; conditional E-value: 0.0075 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k + C C + f+++f +w h ENSP00000381512 935 KPFICHVCNKAFRTNFRLWSHF 956 5678***************985 PP == domain 5 score: 15.9 bits; conditional E-value: 9e-06 0050624 2 kkltCleCmrtfkssfsiwrhq 23 +++ C C rtfk++fs+w h+ ENSP00000381512 1041 RQFMCKLCHRTFKTAFSLWSHE 1062 5688****************97 PP >> ENSP00000381523 pep:known chromosome:NCBI36:21:42280009:42303519:-1 gene:ENSG00000173276 transcript:ENST00000398511 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 8.6 0.2 0.0021 6 2 29 .. 544 571 .. 543 576 .. 0.91 2 ? 4.9 1.1 0.035 1e+02 4 27 .. 575 598 .. 572 607 .. 0.85 3 ! 76.5 0.3 1.4e-25 4.1e-22 1 41 [] 772 812 .. 772 812 .. 0.98 4 ! 6.9 0.2 0.0075 22 2 23 .. 935 956 .. 934 969 .. 0.82 5 ! 15.9 0.6 9e-06 0.026 2 23 .. 1041 1062 .. 1040 1066 .] 0.88 Alignments for each domain: == domain 1 score: 8.6 bits; conditional E-value: 0.0021 0050624 2 kkltCleCmrtfkssfsiwrhqvevhnq 29 kk+ C C++ f+s+ + rh hn ENSP00000381523 544 KKFKCKHCLKIFRSTAGLHRHVNMYHNP 571 899******************9999986 PP == domain 2 score: 4.9 bits; conditional E-value: 0.035 0050624 4 ltCleCmrtfkssfsiwrhqvevh 27 C C + f ++f +w h h ENSP00000381523 575 YACDICHKRFHTNFKVWTHCQTQH 598 67999*************976655 PP == domain 3 score: 76.5 bits; conditional E-value: 1.4e-25 0050624 1 ykkltCleCmrtfkssfsiwrhqvevhnqnsmapkeglslp 41 ykkltCleCmrtfkssfsiwrhqvevhnqn+map+e++slp ENSP00000381523 772 YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTENFSLP 812 9*************************************997 PP == domain 4 score: 6.9 bits; conditional E-value: 0.0075 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k + C C + f+++f +w h ENSP00000381523 935 KPFICHVCNKAFRTNFRLWSHF 956 5678***************985 PP == domain 5 score: 15.9 bits; conditional E-value: 9e-06 0050624 2 kkltCleCmrtfkssfsiwrhq 23 +++ C C rtfk++fs+w h+ ENSP00000381523 1041 RQFMCKLCHRTFKTAFSLWSHE 1062 5688****************97 PP >> ENSP00000381517 pep:known chromosome:NCBI36:21:42280009:42303535:-1 gene:ENSG00000173276 transcript:ENST00000398505 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 76.8 0.3 1.1e-25 3.2e-22 1 41 [] 571 611 .. 571 611 .. 0.98 2 ! 7.3 0.2 0.0059 17 2 23 .. 734 755 .. 733 768 .. 0.82 3 ! 16.2 0.6 7.1e-06 0.021 2 23 .. 840 861 .. 839 865 .] 0.88 Alignments for each domain: == domain 1 score: 76.8 bits; conditional E-value: 1.1e-25 0050624 1 ykkltCleCmrtfkssfsiwrhqvevhnqnsmapkeglslp 41 ykkltCleCmrtfkssfsiwrhqvevhnqn+map+e++slp ENSP00000381517 571 YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTENFSLP 611 9*************************************997 PP == domain 2 score: 7.3 bits; conditional E-value: 0.0059 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k + C C + f+++f +w h ENSP00000381517 734 KPFICHVCNKAFRTNFRLWSHF 755 5678***************985 PP == domain 3 score: 16.2 bits; conditional E-value: 7.1e-06 0050624 2 kkltCleCmrtfkssfsiwrhq 23 +++ C C rtfk++fs+w h+ ENSP00000381517 840 RQFMCKLCHRTFKTAFSLWSHE 861 5688****************97 PP >> ENSP00000342577 pep:novel chromosome:NCBI36:19:42059543:42060922:1 gene:ENSG00000167637 transcript:ENST00000344705 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.0 0.0 0.14 4.1e+02 3 23 .. 44 64 .. 42 69 .. 0.86 2 ? 4.1 0.0 0.063 1.8e+02 3 23 .. 72 92 .. 70 102 .. 0.86 3 ? 6.0 0.0 0.016 45 3 23 .. 100 120 .. 98 126 .. 0.89 4 ? 2.5 0.0 0.21 6.2e+02 4 23 .. 129 148 .. 126 153 .. 0.87 5 ? 4.2 0.0 0.057 1.7e+02 3 23 .. 156 176 .. 154 181 .. 0.88 6 ? 5.3 0.0 0.025 72 3 23 .. 184 204 .. 182 212 .. 0.87 7 ? 4.8 0.0 0.037 1.1e+02 3 22 .. 212 231 .. 210 237 .. 0.83 8 ? 4.3 0.0 0.056 1.6e+02 3 24 .. 240 261 .. 238 268 .. 0.88 9 ? 6.4 0.0 0.012 34 4 23 .. 269 288 .. 266 295 .. 0.88 10 ? 5.0 0.0 0.031 91 3 23 .. 296 316 .. 294 320 .. 0.89 Alignments for each domain: == domain 1 score: 3.0 bits; conditional E-value: 0.14 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f s ++ hq ENSP00000342577 44 PYECKECGKAFGSGANLAYHQ 64 568**********99998888 PP == domain 2 score: 4.1 bits; conditional E-value: 0.063 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC + f s ++ +hq ENSP00000342577 72 PFECKECGKAFGSGSNLTHHQ 92 678**********99999888 PP == domain 3 score: 6.0 bits; conditional E-value: 0.016 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f s ++ rhq ENSP00000342577 100 PYECKECGKAFSSGSALTRHQ 120 568*****************9 PP == domain 4 score: 2.5 bits; conditional E-value: 0.21 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f ++ rhq ENSP00000342577 129 YICNECGKAFSFGSALTRHQ 148 67*********999999998 PP == domain 5 score: 4.2 bits; conditional E-value: 0.057 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+s ++ +hq ENSP00000342577 156 PYVCKECGKAFNSGSDLTQHQ 176 568***********9999998 PP == domain 6 score: 5.3 bits; conditional E-value: 0.025 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+s + +hq ENSP00000342577 184 PYECKECEKAFRSGSKLIQHQ 204 568***********9999998 PP == domain 7 score: 4.8 bits; conditional E-value: 0.037 0050624 3 kltCleCmrtfkssfsiwrh 22 C eC +tf s ++ +h ENSP00000342577 212 PYECKECGKTFSSGSDLTQH 231 568*********99888777 PP == domain 8 score: 4.3 bits; conditional E-value: 0.056 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC + f s + +hq+ ENSP00000342577 240 PYECKECGKAFGSGSKLIQHQL 261 568**************99996 PP == domain 9 score: 6.4 bits; conditional E-value: 0.012 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC ++f s ++ rhq ENSP00000342577 269 YECKECGKSFSSGSALNRHQ 288 68*****************9 PP == domain 10 score: 5.0 bits; conditional E-value: 0.031 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f s s+ +hq ENSP00000342577 296 PYECKECGKAFYSGSSLTQHQ 316 568***************998 PP >> ENSP00000325864 pep:known chromosome:NCBI36:19:42033103:42062306:1 gene:ENSG00000167637 transcript:ENST00000318177 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.0 0.0 0.31 9e+02 3 23 .. 61 81 .. 59 86 .. 0.86 2 ? 2.3 0.0 0.24 7.1e+02 3 23 .. 89 109 .. 87 114 .. 0.86 3 ? 3.2 0.0 0.12 3.6e+02 3 23 .. 117 137 .. 115 143 .. 0.86 4 ? 3.7 0.0 0.085 2.5e+02 3 24 .. 145 166 .. 143 173 .. 0.88 5 ? 1.2 0.1 0.58 1.7e+03 4 23 .. 174 193 .. 171 197 .. 0.82 6 ? 2.0 0.0 0.32 9.2e+02 3 22 .. 201 220 .. 199 226 .. 0.83 7 ? 1.0 0.0 0.66 1.9e+03 4 23 .. 230 249 .. 227 254 .. 0.88 8 ? 1.8 0.0 0.36 1e+03 4 23 .. 258 277 .. 255 282 .. 0.87 9 ? 3.5 0.0 0.097 2.8e+02 3 23 .. 285 305 .. 283 310 .. 0.88 10 ? 4.6 0.0 0.044 1.3e+02 3 23 .. 313 333 .. 311 340 .. 0.87 11 ? 4.1 0.0 0.063 1.8e+02 3 22 .. 341 360 .. 339 366 .. 0.83 12 ? 3.5 0.0 0.097 2.8e+02 3 24 .. 369 390 .. 367 397 .. 0.88 13 ? 5.6 0.0 0.02 58 4 23 .. 398 417 .. 395 424 .. 0.88 14 ? 4.9 0.0 0.036 1e+02 3 23 .. 425 445 .. 423 461 .. 0.86 Alignments for each domain: == domain 1 score: 2.0 bits; conditional E-value: 0.31 0050624 3 kltCleCmrtfkssfsiwrhq 23 l C eC + f + rhq ENSP00000325864 61 LLECKECGKDFSFVSVLVRHQ 81 689********9998899998 PP == domain 2 score: 2.3 bits; conditional E-value: 0.24 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f s ++ hq ENSP00000325864 89 PYECKECGKAFGSGANLAYHQ 109 568**********99998887 PP == domain 3 score: 3.2 bits; conditional E-value: 0.12 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC + f s ++ +hq ENSP00000325864 117 PFECKECGKAFGSGSNLTHHQ 137 678**********99999888 PP == domain 4 score: 3.7 bits; conditional E-value: 0.085 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC + f + rhq+ ENSP00000325864 145 PYECKECGKAFSFGSGLIRHQI 166 568*****************98 PP == domain 5 score: 1.2 bits; conditional E-value: 0.58 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC ++f ++ rh+ ENSP00000325864 174 YECKECGKSFSFESALIRHH 193 68*******99888888885 PP == domain 6 score: 2.0 bits; conditional E-value: 0.32 0050624 3 kltCleCmrtfkssfsiwrh 22 C++C + f s ++ +h ENSP00000325864 201 PYECIDCGKAFGSGSNLTQH 220 568*********99888777 PP == domain 7 score: 1.0 bits; conditional E-value: 0.66 0050624 4 ltCleCmrtfkssfsiwrhq 23 C C f s ++ rhq ENSP00000325864 230 YECKACGMAFSSGSALTRHQ 249 6799***************9 PP == domain 8 score: 1.8 bits; conditional E-value: 0.36 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f ++ rhq ENSP00000325864 258 YICNECGKAFSFGSALTRHQ 277 67*********999999998 PP == domain 9 score: 3.5 bits; conditional E-value: 0.097 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+s ++ +hq ENSP00000325864 285 PYVCKECGKAFNSGSDLTQHQ 305 568***********9999998 PP == domain 10 score: 4.6 bits; conditional E-value: 0.044 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+s + +hq ENSP00000325864 313 PYECKECEKAFRSGSKLIQHQ 333 568***********9999998 PP == domain 11 score: 4.1 bits; conditional E-value: 0.063 0050624 3 kltCleCmrtfkssfsiwrh 22 C eC +tf s ++ +h ENSP00000325864 341 PYECKECGKTFSSGSDLTQH 360 568*********99888777 PP == domain 12 score: 3.5 bits; conditional E-value: 0.097 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC + f s + +hq+ ENSP00000325864 369 PYECKECGKAFGSGSKLIQHQL 390 568**************99996 PP == domain 13 score: 5.6 bits; conditional E-value: 0.02 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC ++f s ++ rhq ENSP00000325864 398 YECKECGKSFSSGSALNRHQ 417 68*****************9 PP == domain 14 score: 4.9 bits; conditional E-value: 0.036 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f s s+ +hq ENSP00000325864 425 PYECKECGKAFYSGSSLTQHQ 445 568****************99 PP >> ENSP00000320347 pep:known chromosome:NCBI36:17:4922478:4940392:1 gene:ENSG00000180787 transcript:ENST00000318833 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.9 0.0 0.34 9.9e+02 3 22 .. 140 159 .. 138 165 .. 0.77 2 ? 5.9 0.0 0.016 47 3 22 .. 168 187 .. 166 193 .. 0.88 3 ? 1.2 0.1 0.56 1.6e+03 3 23 .. 196 217 .. 194 223 .. 0.68 4 ? -0.2 0.0 1.6 4.7e+03 4 23 .. 225 244 .. 222 248 .. 0.80 5 ? 5.3 0.1 0.026 77 3 23 .. 252 272 .. 250 282 .. 0.85 6 ? 6.4 0.0 0.011 33 5 23 .. 282 300 .. 278 308 .. 0.88 7 ? 3.0 0.0 0.15 4.3e+02 4 23 .. 309 328 .. 306 335 .. 0.87 8 ? 4.6 0.0 0.042 1.2e+02 4 22 .. 337 355 .. 334 364 .. 0.86 9 ? 2.9 0.0 0.16 4.7e+02 3 23 .. 364 384 .. 362 388 .. 0.88 10 ? 2.8 0.0 0.17 5.1e+02 3 23 .. 392 412 .. 390 417 .. 0.82 11 ? 4.4 0.1 0.05 1.4e+02 4 23 .. 421 440 .. 418 444 .. 0.82 12 ? 2.4 0.0 0.22 6.5e+02 3 23 .. 448 468 .. 446 473 .. 0.79 13 ! 7.7 0.3 0.0044 13 3 23 .. 476 496 .. 474 501 .. 0.89 Alignments for each domain: == domain 1 score: 1.9 bits; conditional E-value: 0.34 0050624 3 kltCleCmrtfkssfsiwrh 22 tC eC + f+ + + +h ENSP00000320347 140 PHTCKECGKAFNQNSHLIQH 159 579******99887666655 PP == domain 2 score: 5.9 bits; conditional E-value: 0.016 0050624 3 kltCleCmrtfkssfsiwrh 22 + C eC +tf ++ s+ rh ENSP00000320347 168 PFECKECGKTFGTNSSLRRH 187 678*************9999 PP == domain 3 score: 1.2 bits; conditional E-value: 0.56 0050624 3 kltCleCmrtfkss.fsiwrhq 23 + C eC + f s i +h+ ENSP00000320347 196 PFACNECGKAFIQSsHLIHHHR 217 678******9965405555554 PP == domain 4 score: -0.2 bits; conditional E-value: 1.6 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f + ++ hq ENSP00000320347 225 YKCEECGKAFSQNSALILHQ 244 67*******99887777776 PP == domain 5 score: 5.3 bits; conditional E-value: 0.026 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC +tf+ s + +hq ENSP00000320347 252 PYECNECGKTFRVSSQLIQHQ 272 568***********9999998 PP == domain 6 score: 6.4 bits; conditional E-value: 0.011 0050624 5 tCleCmrtfkssfsiwrhq 23 C eC + fk s + rhq ENSP00000320347 282 ECNECGKAFKHSSGLIRHQ 300 6*****************9 PP == domain 7 score: 3.0 bits; conditional E-value: 0.15 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f s + rhq ENSP00000320347 309 YLCNECGKGFGQSSELIRHQ 328 67*****************9 PP == domain 8 score: 4.6 bits; conditional E-value: 0.042 0050624 4 ltCleCmrtfkssfsiwrh 22 C eC +tf + i rh ENSP00000320347 337 YECNECGKTFGQNSEIIRH 355 68**************999 PP == domain 9 score: 2.9 bits; conditional E-value: 0.16 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+ + + rh+ ENSP00000320347 364 PYVCKECGKAFRGNSELLRHE 384 568***********9999996 PP == domain 10 score: 2.8 bits; conditional E-value: 0.17 0050624 3 kltCleCmrtfkssfsiwrhq 23 C+eC + f+ + + hq ENSP00000320347 392 PYECFECGKAFRRTSHLIVHQ 412 568********9988877776 PP == domain 11 score: 4.4 bits; conditional E-value: 0.05 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC rtf ++ + hq ENSP00000320347 421 HQCNECARTFWDNSELLLHQ 440 57********9887777776 PP == domain 12 score: 2.4 bits; conditional E-value: 0.22 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC +tf + hq ENSP00000320347 448 PYECSECEKTFSQHSQLIIHQ 468 568********9877666665 PP == domain 13 score: 7.7 bits; conditional E-value: 0.0044 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC +tf s + rhq ENSP00000320347 476 PYECQECQKTFSRSSHLLRHQ 496 568*****************9 PP >> ENSP00000340711 pep:known chromosome:NCBI36:9:96080860:96103557:1 gene:ENSG00000175787 transcript:ENST00000340911 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.9 0.1 0.32 9.4e+02 4 23 .. 43 62 .. 40 69 .. 0.84 2 ? 3.2 0.0 0.12 3.5e+02 4 23 .. 71 90 .. 68 96 .. 0.81 3 ? 3.8 0.1 0.08 2.3e+02 3 23 .. 98 118 .. 96 123 .. 0.85 4 ? 4.6 0.0 0.045 1.3e+02 3 23 .. 126 146 .. 124 151 .. 0.88 5 ? 4.8 0.0 0.037 1.1e+02 3 24 .. 154 175 .. 152 182 .. 0.88 6 ! 8.7 0.1 0.002 5.9 3 25 .. 182 204 .. 180 209 .. 0.87 7 ! 7.1 0.1 0.0068 20 3 24 .. 210 231 .. 208 239 .. 0.88 8 ? 1.3 0.0 0.51 1.5e+03 4 24 .. 239 259 .. 236 267 .. 0.85 9 ? 4.5 0.0 0.047 1.4e+02 4 24 .. 267 287 .. 264 293 .. 0.88 10 ? 0.7 0.0 0.85 2.5e+03 4 24 .. 295 315 .. 292 324 .. 0.82 11 ? 2.9 0.0 0.15 4.4e+02 4 24 .. 351 371 .. 348 378 .. 0.85 12 ? 3.7 0.1 0.083 2.4e+02 3 24 .. 378 399 .. 376 409 .. 0.83 Alignments for each domain: == domain 1 score: 1.9 bits; conditional E-value: 0.32 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC r f ++ +hq ENSP00000340711 43 HVCPECGRGFCQRSDLIKHQ 62 68********9999999998 PP == domain 2 score: 3.2 bits; conditional E-value: 0.12 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC r f s+ hq ENSP00000340711 71 YLCPECGRRFSQKASLSIHQ 90 67********9988888887 PP == domain 3 score: 3.8 bits; conditional E-value: 0.08 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC r f+ + s+ h+ ENSP00000340711 98 PYVCRECGRHFRYTSSLTNHK 118 568*********999988875 PP == domain 4 score: 4.6 bits; conditional E-value: 0.045 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC r f+ +++ hq ENSP00000340711 126 PFVCQECGRGFRQKIALLLHQ 146 678**********99999998 PP == domain 5 score: 4.8 bits; conditional E-value: 0.037 0050624 3 kltCleCmrtfkssfsiwrhqv 24 + C eC r f s+ +hq ENSP00000340711 154 PFVCPECGRGFCQKASLLQHQS 175 678*****************95 PP == domain 6 score: 8.7 bits; conditional E-value: 0.002 0050624 3 kltCleCmrtfkssfsiwrhqve 25 + CleC r+f+ + hqv ENSP00000340711 182 PFLCLECGRSFRQQSLLLSHQVT 204 578***********999999996 PP == domain 7 score: 7.1 bits; conditional E-value: 0.0068 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC ++f+ ++ rhq ENSP00000340711 210 PYVCAECGHSFRQKVTLIRHQR 231 568*****************95 PP == domain 8 score: 1.3 bits; conditional E-value: 0.51 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C r f ++ hq ENSP00000340711 239 YLCPQCGRGFSQKVTLIGHQR 259 679*********999999985 PP == domain 9 score: 4.5 bits; conditional E-value: 0.047 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C r f ++ rhq ENSP00000340711 267 YLCPDCGRGFGQKVTLIRHQR 287 67*****************95 PP == domain 10 score: 0.7 bits; conditional E-value: 0.85 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C r f + rhq ENSP00000340711 295 YLCPKCGRAFGFKSLLTRHQR 315 6799*****999988999985 PP == domain 11 score: 2.9 bits; conditional E-value: 0.15 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC r f ++ rhq ENSP00000340711 351 CICDECGRGFGFKSALIRHQR 371 579*******99999999995 PP == domain 12 score: 3.7 bits; conditional E-value: 0.083 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC r f + rh+ ENSP00000340711 378 PYVCRECGRGFSQKSHLHRHRR 399 568*********9999999975 PP >> ENSP00000340524 pep:known chromosome:NCBI36:4:423777:483442:-1 gene:ENSG00000182903 transcript:ENST00000338977 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.8 0.0 0.75 2.2e+03 3 23 .. 18 38 .. 16 42 .. 0.86 2 ? 4.3 0.0 0.053 1.6e+02 3 23 .. 46 66 .. 44 71 .. 0.86 3 ? 1.3 0.0 0.52 1.5e+03 2 23 .. 73 94 .. 72 98 .. 0.87 4 ! 7.2 0.0 0.0062 18 2 23 .. 101 122 .. 100 135 .. 0.88 5 ? 2.5 0.1 0.21 6e+02 3 23 .. 158 178 .. 156 189 .. 0.84 6 ? 1.1 0.1 0.62 1.8e+03 4 23 .. 215 234 .. 212 241 .. 0.85 7 ? -0.9 0.0 2.6 7.7e+03 4 23 .. 243 262 .. 240 265 .. 0.85 8 ! 7.2 0.1 0.0064 19 3 23 .. 270 290 .. 268 295 .. 0.88 9 ? -0.0 0.0 1.4 4.2e+03 3 22 .. 298 317 .. 296 322 .. 0.84 10 ! 7.5 0.1 0.0049 14 2 23 .. 325 346 .. 324 359 .. 0.88 11 ? -1.7 0.0 4.9 1.4e+04 4 22 .. 355 373 .. 352 378 .. 0.75 12 ? -0.0 0.0 1.4 4.1e+03 4 23 .. 411 430 .. 409 443 .. 0.82 13 ? 0.2 0.0 1.2 3.5e+03 4 23 .. 439 458 .. 436 463 .. 0.84 14 ? -0.1 0.0 1.5 4.3e+03 4 23 .. 467 486 .. 464 494 .. 0.80 15 ? 4.2 0.1 0.057 1.7e+02 4 23 .. 523 542 .. 520 552 .. 0.87 16 ? 1.0 0.0 0.66 1.9e+03 3 23 .. 550 570 .. 548 574 .. 0.86 17 ! 7.2 0.1 0.0061 18 3 23 .. 578 598 .. 576 603 .. 0.88 18 ? 3.4 0.0 0.11 3.2e+02 2 22 .. 605 625 .. 604 630 .. 0.85 19 ! 7.4 0.0 0.0052 15 2 23 .. 633 654 .. 632 659 .. 0.89 20 ? 6.2 0.0 0.013 38 2 23 .. 661 682 .. 660 690 .. 0.87 Alignments for each domain: == domain 1 score: 0.8 bits; conditional E-value: 0.75 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + + ss s+ +h+ ENSP00000340524 18 PYKCKECGKVISSSSSFAKHK 38 568***********9999886 PP == domain 2 score: 4.3 bits; conditional E-value: 0.053 0050624 3 kltCleCmrtfkssfsiwrhq 23 + CleC + f+ s ++ +h+ ENSP00000340524 46 PFKCLECGKAFNISTTLTKHR 66 678********9999988885 PP == domain 3 score: 1.3 bits; conditional E-value: 0.52 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k tC C + f+ s +++ h+ ENSP00000340524 73 KPYTCEVCGKAFRQSANLYVHR 94 5689***********9999885 PP == domain 4 score: 7.2 bits; conditional E-value: 0.0062 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k tC eC +tf+ s +++ h+ ENSP00000340524 101 KPYTCGECGKTFRQSANLYVHR 122 568************9999886 PP == domain 5 score: 2.5 bits; conditional E-value: 0.21 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+ss ++ h+ ENSP00000340524 158 PYKCEECGKAFNSSTNLTAHK 178 568***********9988775 PP == domain 6 score: 1.1 bits; conditional E-value: 0.62 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f s+ + +h+ ENSP00000340524 215 YKCKECGKAFIHSLHLNKHE 234 68*********999998886 PP == domain 7 score: -0.9 bits; conditional E-value: 2.6 0050624 4 ltCleCmrtfkssfsiwrhq 23 C +C + + ss s+ +h+ ENSP00000340524 243 YKCKQCGKVITSSSSFAKHK 262 689********999998885 PP == domain 8 score: 7.2 bits; conditional E-value: 0.0064 0050624 3 kltCleCmrtfkssfsiwrhq 23 + CleC + f ss ++ +h+ ENSP00000340524 270 PFECLECGKAFTSSTTLTKHR 290 678***********9999986 PP == domain 9 score: -0.0 bits; conditional E-value: 1.4 0050624 3 kltCleCmrtfkssfsiwrh 22 tC C + f+ s ++ h ENSP00000340524 298 PYTCEVCGKAFRQSAILYVH 317 689*********99888777 PP == domain 10 score: 7.5 bits; conditional E-value: 0.0049 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k tC eC +tf+ s +++ h+ ENSP00000340524 325 KPYTCEECGKTFRQSANLYVHR 346 568************9999886 PP == domain 11 score: -1.7 bits; conditional E-value: 4.9 0050624 4 ltCleCmrtfkssfsiwrh 22 C eC + f ++ +h ENSP00000340524 355 YKCEECGKAFGRYTDLNQH 373 689***9999876665555 PP == domain 12 score: -0.0 bits; conditional E-value: 1.4 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f s ++ +h ENSP00000340524 411 YKCEECGKAFAPSTDLNQHT 430 67********9998887775 PP == domain 13 score: 0.2 bits; conditional E-value: 1.2 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f s+++ +h+ ENSP00000340524 439 YKCEECGKAFGWSIALNQHK 458 57********9999888875 PP == domain 14 score: -0.1 bits; conditional E-value: 1.5 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + f s ++ h+ ENSP00000340524 467 YKCEECGKAFSRSRNLTTHR 486 68********9988877775 PP == domain 15 score: 4.2 bits; conditional E-value: 0.057 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC + fk s + rh+ ENSP00000340524 523 YKCKECGKVFKQSSHLNRHE 542 57************999996 PP == domain 16 score: 1.0 bits; conditional E-value: 0.66 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + + ss s+ +h+ ENSP00000340524 550 PYKCKECGKVITSSSSFAKHK 570 568**********99999886 PP == domain 17 score: 7.2 bits; conditional E-value: 0.0061 0050624 3 kltCleCmrtfkssfsiwrhq 23 + CleC + f ss ++ +h+ ENSP00000340524 578 PFKCLECGKAFTSSTTLTKHR 598 678***********9999986 PP == domain 18 score: 3.4 bits; conditional E-value: 0.11 0050624 2 kkltCleCmrtfkssfsiwrh 22 k tC eC + f+ s ++ h ENSP00000340524 605 KPYTCEECGKAFRQSAILYVH 625 568**********99888877 PP == domain 19 score: 7.4 bits; conditional E-value: 0.0052 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k tC eC +tf+ s +++ h+ ENSP00000340524 633 KPYTCGECGKTFRQSANLYAHK 654 568*************999996 PP == domain 20 score: 6.2 bits; conditional E-value: 0.013 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k tC +C +tf+ s +++ h+ ENSP00000340524 661 KPYTCGDCGKTFRQSANLYAHK 682 568**************99996 PP >> ENSP00000270459 pep:known chromosome:NCBI36:19:61290544:61324461:-1 gene:ENSG00000142409 transcript:ENST00000270459 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.4 0.2 0.23 6.8e+02 5 24 .. 67 86 .. 64 94 .. 0.85 2 ? 2.0 0.0 0.31 8.9e+02 5 22 .. 95 112 .. 91 117 .. 0.83 3 ? 5.9 0.1 0.017 49 3 23 .. 121 141 .. 119 146 .. 0.88 4 ? 6.3 0.0 0.012 35 2 23 .. 148 169 .. 147 173 .. 0.89 5 ? 2.0 0.0 0.31 9.2e+02 2 22 .. 176 196 .. 175 202 .. 0.88 6 ? 6.0 0.0 0.015 43 3 29 .. 279 305 .. 277 312 .. 0.86 7 ? 0.7 0.0 0.84 2.5e+03 5 23 .. 318 336 .. 316 343 .. 0.87 Alignments for each domain: == domain 1 score: 2.4 bits; conditional E-value: 0.23 0050624 5 tCleCmrtfkssfsiwrhqv 24 C eC ++f + rhq ENSP00000270459 67 ICNECGKSFSHWSKLTRHQR 86 699*****999999999985 PP == domain 2 score: 2.0 bits; conditional E-value: 0.31 0050624 5 tCleCmrtfkssfsiwrh 22 C +C +tf s + +h ENSP00000270459 95 ACADCGKTFSQSSHLVQH 112 7********998877777 PP == domain 3 score: 5.9 bits; conditional E-value: 0.017 0050624 3 kltCleCmrtfkssfsiwrhq 23 CleC + f s ++ +hq ENSP00000270459 121 PYACLECGKRFSWSSNLMQHQ 141 578**********99999998 PP == domain 4 score: 6.3 bits; conditional E-value: 0.012 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k tC +C r+f s s+ +h+ ENSP00000270459 148 KPYTCPDCGRSFTQSKSLAKHR 169 568************9999996 PP == domain 5 score: 2.0 bits; conditional E-value: 0.31 0050624 2 kkltCleCmrtfkssfsiwrh 22 k + C C r f s+ rh ENSP00000270459 176 KPFVCPRCGRGFSQPKSLARH 196 6789**********9999999 PP == domain 6 score: 6.0 bits; conditional E-value: 0.015 0050624 3 kltCleCmrtfkssfsiwrhqvevhnq 29 CleC + f + hq h++ ENSP00000270459 279 PYVCLECGKGFGHGAGLLAHQRAQHGD 305 578*****************9988876 PP == domain 7 score: 0.7 bits; conditional E-value: 0.84 0050624 5 tCleCmrtfkssfsiwrhq 23 C+eC f ++ rh+ ENSP00000270459 318 ICVECGEGFVQGAALRRHK 336 5********9999999986 PP >> ENSP00000345765 pep:novel chromosome:NCBI36:X:152336975:152340151:1 gene:ENSG00000189420 transcript:ENST00000338647 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.4 0.0 0.49 1.4e+03 2 24 .. 150 172 .. 149 179 .. 0.87 2 ! 7.7 0.0 0.0043 13 3 23 .. 179 199 .. 177 206 .. 0.89 3 ! 9.1 0.0 0.0014 4.2 3 24 .. 207 228 .. 205 237 .. 0.87 4 ? 4.1 0.0 0.064 1.9e+02 3 23 .. 235 255 .. 233 261 .. 0.86 5 ? 3.0 0.0 0.14 4.2e+02 4 24 .. 264 284 .. 261 292 .. 0.86 6 ? 2.3 0.0 0.25 7.3e+02 3 23 .. 291 311 .. 289 318 .. 0.85 7 ? 1.3 0.0 0.52 1.5e+03 3 22 .. 319 338 .. 317 344 .. 0.78 8 ? 2.6 0.0 0.2 5.9e+02 4 24 .. 348 368 .. 345 373 .. 0.87 Alignments for each domain: == domain 1 score: 1.4 bits; conditional E-value: 0.49 0050624 2 kkltCleCmrtfkssfsiwrhqv 24 k+ C +C + f s ++ +h++ ENSP00000345765 150 KRYLCQQCGKAFSRSSNLIKHRI 172 5678**********999999986 PP == domain 2 score: 7.7 bits; conditional E-value: 0.0043 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC + f+ sf++ hq ENSP00000345765 179 PYACPECGKLFRRSFALLEHQ 199 578*****************9 PP == domain 3 score: 9.1 bits; conditional E-value: 0.0014 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC +tf s ++ +hqv ENSP00000345765 207 PYACPECSKTFTRSSNLIKHQV 228 578******************9 PP == domain 4 score: 4.1 bits; conditional E-value: 0.064 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C +C + f+ sf++ h ENSP00000345765 235 PFACGDCGKLFRRSFALLEHA 255 578*************99985 PP == domain 5 score: 3.0 bits; conditional E-value: 0.14 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC + f s ++ hq ENSP00000345765 264 YACPECGKAFSRSSNLIEHQR 284 68***********99999985 PP == domain 6 score: 2.3 bits; conditional E-value: 0.25 0050624 3 kltCleCmrtfkssfsiwrhq 23 C +C + fk + +hq ENSP00000345765 291 PYACGQCAKAFKGVSQLIHHQ 311 568*********999998888 PP == domain 7 score: 1.3 bits; conditional E-value: 0.52 0050624 3 kltCleCmrtfkssfsiwrh 22 + C eC + f+ + +h ENSP00000345765 319 PFACRECGKAFRGRSGLSQH 338 678********987666555 PP == domain 8 score: 2.6 bits; conditional E-value: 0.2 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C + f ++++hq ENSP00000345765 348 YECSDCGKAFGRRANLFKHQA 368 68*****************95 PP >> ENSP00000339097 pep:known chromosome:NCBI36:9:96061399:96105106:1 gene:ENSG00000175787 transcript:ENST00000319451 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.3 0.1 0.5 1.5e+03 4 23 .. 221 240 .. 218 247 .. 0.84 2 ? 2.8 0.0 0.17 4.9e+02 4 24 .. 249 269 .. 246 276 .. 0.81 3 ? 3.2 0.1 0.12 3.5e+02 3 23 .. 276 296 .. 274 301 .. 0.85 4 ? 4.0 0.0 0.07 2e+02 3 23 .. 304 324 .. 302 329 .. 0.88 5 ? 4.1 0.0 0.064 1.9e+02 3 23 .. 332 352 .. 330 358 .. 0.88 6 ! 8.2 0.0 0.003 8.6 3 25 .. 360 382 .. 358 388 .. 0.87 7 ? 6.5 0.1 0.011 31 3 24 .. 388 409 .. 386 418 .. 0.88 8 ? 0.5 0.0 0.97 2.8e+03 4 23 .. 417 436 .. 414 441 .. 0.86 9 ? 3.9 0.0 0.071 2.1e+02 4 24 .. 445 465 .. 442 472 .. 0.87 10 ? 0.0 0.0 1.4 4e+03 4 23 .. 473 492 .. 470 501 .. 0.82 11 ? 2.2 0.0 0.26 7.7e+02 4 24 .. 529 549 .. 527 556 .. 0.85 12 ? 3.1 0.1 0.13 3.8e+02 3 24 .. 556 577 .. 554 587 .. 0.83 Alignments for each domain: == domain 1 score: 1.3 bits; conditional E-value: 0.5 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC r f ++ +hq ENSP00000339097 221 HVCPECGRGFCQRSDLIKHQ 240 67********9999999998 PP == domain 2 score: 2.8 bits; conditional E-value: 0.17 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC r f s+ hq ENSP00000339097 249 YLCPECGRRFSQKASLSIHQR 269 67********99888888875 PP == domain 3 score: 3.2 bits; conditional E-value: 0.12 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC r f+ + s+ h+ ENSP00000339097 276 PYVCRECGRHFRYTSSLTNHK 296 568*********999988875 PP == domain 4 score: 4.0 bits; conditional E-value: 0.07 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC r f+ +++ hq ENSP00000339097 304 PFVCQECGRGFRQKIALLLHQ 324 678**********99999998 PP == domain 5 score: 4.1 bits; conditional E-value: 0.064 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC r f s+ +hq ENSP00000339097 332 PFVCPECGRGFCQKASLLQHQ 352 678****************99 PP == domain 6 score: 8.2 bits; conditional E-value: 0.003 0050624 3 kltCleCmrtfkssfsiwrhqve 25 + CleC r+f+ + hqv ENSP00000339097 360 PFLCLECGRSFRQQSLLLSHQVT 382 578***********999999996 PP == domain 7 score: 6.5 bits; conditional E-value: 0.011 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC ++f+ ++ rhq ENSP00000339097 388 PYVCAECGHSFRQKVTLIRHQR 409 568*****************95 PP == domain 8 score: 0.5 bits; conditional E-value: 0.97 0050624 4 ltCleCmrtfkssfsiwrhq 23 C +C r f ++ hq ENSP00000339097 417 YLCPQCGRGFSQKVTLIGHQ 436 679********999999998 PP == domain 9 score: 3.9 bits; conditional E-value: 0.071 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C r f ++ rhq ENSP00000339097 445 YLCPDCGRGFGQKVTLIRHQR 465 67*****************95 PP == domain 10 score: 0.0 bits; conditional E-value: 1.4 0050624 4 ltCleCmrtfkssfsiwrhq 23 C +C r f + rhq ENSP00000339097 473 YLCPKCGRAFGFKSLLTRHQ 492 6799*****99988888998 PP == domain 11 score: 2.2 bits; conditional E-value: 0.26 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC r f ++ rhq ENSP00000339097 529 CICDECGRGFGFKSALIRHQR 549 5799******99999999995 PP == domain 12 score: 3.1 bits; conditional E-value: 0.13 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC r f + rh+ ENSP00000339097 556 PYVCRECGRGFSQKSHLHRHRR 577 568*********9999999975 PP >> ENSP00000375597 pep:known chromosome:NCBI36:19:60781423:60802705:-1 gene:ENSG00000179943 transcript:ENST00000391717 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.2 0.1 0.56 1.6e+03 4 22 .. 23 41 .. 21 47 .. 0.85 2 ? 3.6 0.0 0.095 2.8e+02 4 22 .. 51 69 .. 48 74 .. 0.86 3 ? 3.3 0.0 0.11 3.3e+02 4 24 .. 79 99 .. 76 105 .. 0.87 4 ? 3.8 0.1 0.078 2.3e+02 3 29 .. 106 132 .. 104 142 .. 0.85 5 ? 3.3 0.0 0.11 3.3e+02 4 23 .. 192 211 .. 189 217 .. 0.84 6 ? 5.2 0.3 0.027 80 3 24 .. 219 240 .. 217 249 .. 0.86 7 ? 3.3 0.0 0.12 3.4e+02 4 24 .. 276 296 .. 273 307 .. 0.88 8 ? 5.3 0.0 0.025 73 4 27 .. 332 355 .. 330 361 .. 0.88 9 ? 4.2 0.4 0.057 1.7e+02 3 24 .. 360 381 .. 358 394 .. 0.85 10 ? 0.4 0.0 1 2.9e+03 4 24 .. 417 437 .. 415 441 .. 0.83 11 ? 5.3 0.0 0.026 75 3 23 .. 444 464 .. 442 471 .. 0.84 12 ! 7.1 0.1 0.0064 19 5 23 .. 475 493 .. 472 496 .. 0.92 Alignments for each domain: == domain 1 score: 1.2 bits; conditional E-value: 0.56 0050624 4 ltCleCmrtfkssfsiwrh 22 + C eC ++f+ ++ rh ENSP00000375597 23 FHCSECGKSFRYRSDLRRH 41 57********999888888 PP == domain 2 score: 3.6 bits; conditional E-value: 0.095 0050624 4 ltCleCmrtfkssfsiwrh 22 C C + fk sf++ h ENSP00000375597 51 HACPRCGKGFKHSFNLANH 69 67************99877 PP == domain 3 score: 3.3 bits; conditional E-value: 0.11 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C C + f++s + +hqv ENSP00000375597 79 YRCSACPKGFRDSTGLLHHQV 99 6799****************9 PP == domain 4 score: 3.8 bits; conditional E-value: 0.078 0050624 3 kltCleCmrtfkssfsiwrhqvevhnq 29 Cl C f s s+ rh h + ENSP00000375597 106 PYCCLVCELRFSSRSSLGRHLKRQHQD 132 568*****************8877765 PP == domain 5 score: 3.3 bits; conditional E-value: 0.11 0050624 4 ltCleCmrtfkssfsiwrhq 23 + C eC + f+s ++ rh ENSP00000375597 192 FGCSECEKLFRSPRDLERHV 211 67***********9999995 PP == domain 6 score: 5.2 bits; conditional E-value: 0.027 0050624 3 kltCleCmrtfkssfsiwrhqv 24 + CleC + f+ + rh++ ENSP00000375597 219 PFPCLECGKFFRHECYLKRHRL 240 678********99999999975 PP == domain 7 score: 3.3 bits; conditional E-value: 0.12 0050624 4 ltCleCmrtfkssfsiwrhqv 24 l C C r f+ + + rh++ ENSP00000375597 276 LPCPTCGRLFRFPYYLSRHRL 296 89*****************86 PP == domain 8 score: 5.3 bits; conditional E-value: 0.025 0050624 4 ltCleCmrtfkssfsiwrhqvevh 27 l C C rtf + rh + h ENSP00000375597 332 LRCAACPRTFPEPAQLRRHLAQEH 355 88**************99988777 PP == domain 9 score: 4.2 bits; conditional E-value: 0.057 0050624 3 kltCleCmrtfkssfsiwrhqv 24 + C C++ f +s+ rh++ ENSP00000375597 360 RHQCSICLKAFARPWSLSRHRL 381 678999**************86 PP == domain 10 score: 0.4 bits; conditional E-value: 1 0050624 4 ltCleCmrtfkssfsiwrhqv 24 + C eC + f+ + +h v ENSP00000375597 417 FWCPECGKGFRRRAHLRQHGV 437 68********99888888876 PP == domain 11 score: 5.3 bits; conditional E-value: 0.026 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C+ C r fk ++ rh ENSP00000375597 444 PFQCVRCQREFKRLADLARHA 464 678*********999999984 PP == domain 12 score: 7.1 bits; conditional E-value: 0.0064 0050624 5 tCleCmrtfkssfsiwrhq 23 C C r f ++s+ rhq ENSP00000375597 475 PCPRCPRRFSRAYSLLRHQ 493 599***************9 PP >> ENSP00000378792 pep:known chromosome:NCBI36:9:96061399:96105106:1 gene:ENSG00000175787 transcript:ENST00000395395 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.3 0.1 0.52 1.5e+03 4 23 .. 234 253 .. 231 260 .. 0.84 2 ? 2.8 0.0 0.17 5.1e+02 4 24 .. 262 282 .. 259 289 .. 0.81 3 ? 3.2 0.1 0.13 3.7e+02 3 23 .. 289 309 .. 287 314 .. 0.85 4 ? 3.9 0.0 0.072 2.1e+02 3 23 .. 317 337 .. 315 342 .. 0.88 5 ? 4.0 0.0 0.066 1.9e+02 3 23 .. 345 365 .. 343 371 .. 0.88 6 ! 8.1 0.0 0.0031 8.9 3 25 .. 373 395 .. 371 401 .. 0.87 7 ? 6.4 0.1 0.011 31 3 24 .. 401 422 .. 399 431 .. 0.88 8 ? 0.4 0.0 0.99 2.9e+03 4 23 .. 430 449 .. 427 454 .. 0.86 9 ? 3.9 0.0 0.073 2.1e+02 4 24 .. 458 478 .. 455 485 .. 0.87 10 ? -0.0 0.0 1.4 4.1e+03 4 23 .. 486 505 .. 483 514 .. 0.82 11 ? 2.1 0.0 0.28 8.2e+02 4 24 .. 542 562 .. 540 568 .. 0.85 12 ? 3.1 0.1 0.13 3.9e+02 3 24 .. 569 590 .. 567 600 .. 0.83 Alignments for each domain: == domain 1 score: 1.3 bits; conditional E-value: 0.52 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC r f ++ +hq ENSP00000378792 234 HVCPECGRGFCQRSDLIKHQ 253 67********9999999998 PP == domain 2 score: 2.8 bits; conditional E-value: 0.17 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC r f s+ hq ENSP00000378792 262 YLCPECGRRFSQKASLSIHQR 282 67********99888888875 PP == domain 3 score: 3.2 bits; conditional E-value: 0.13 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC r f+ + s+ h+ ENSP00000378792 289 PYVCRECGRHFRYTSSLTNHK 309 568*********999988875 PP == domain 4 score: 3.9 bits; conditional E-value: 0.072 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC r f+ +++ hq ENSP00000378792 317 PFVCQECGRGFRQKIALLLHQ 337 678**********99999998 PP == domain 5 score: 4.0 bits; conditional E-value: 0.066 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC r f s+ +hq ENSP00000378792 345 PFVCPECGRGFCQKASLLQHQ 365 678****************99 PP == domain 6 score: 8.1 bits; conditional E-value: 0.0031 0050624 3 kltCleCmrtfkssfsiwrhqve 25 + CleC r+f+ + hqv ENSP00000378792 373 PFLCLECGRSFRQQSLLLSHQVT 395 578***********999999996 PP == domain 7 score: 6.4 bits; conditional E-value: 0.011 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC ++f+ ++ rhq ENSP00000378792 401 PYVCAECGHSFRQKVTLIRHQR 422 568*****************95 PP == domain 8 score: 0.4 bits; conditional E-value: 0.99 0050624 4 ltCleCmrtfkssfsiwrhq 23 C +C r f ++ hq ENSP00000378792 430 YLCPQCGRGFSQKVTLIGHQ 449 679********999999998 PP == domain 9 score: 3.9 bits; conditional E-value: 0.073 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C r f ++ rhq ENSP00000378792 458 YLCPDCGRGFGQKVTLIRHQR 478 67*****************95 PP == domain 10 score: -0.0 bits; conditional E-value: 1.4 0050624 4 ltCleCmrtfkssfsiwrhq 23 C +C r f + rhq ENSP00000378792 486 YLCPKCGRAFGFKSLLTRHQ 505 6799*****99988888998 PP == domain 11 score: 2.1 bits; conditional E-value: 0.28 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC r f ++ rhq ENSP00000378792 542 CICDECGRGFGFKSALIRHQR 562 5799******99999999995 PP == domain 12 score: 3.1 bits; conditional E-value: 0.13 0050624 3 kltCleCmrtfkssfsiwrhqv 24 C eC r f + rh+ ENSP00000378792 569 PYVCRECGRGFSQKSHLHRHRR 590 568*********9999999975 PP >> ENSP00000328515 pep:known chromosome:NCBI36:8:144444971:144451539:1 gene:ENSG00000185730 transcript:ENST00000330143 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 1.8 0.0 0.35 1e+03 3 22 .. 124 143 .. 122 148 .. 0.82 2 ? 2.8 0.1 0.16 4.8e+02 4 24 .. 153 173 .. 150 179 .. 0.87 3 ! 11.0 0.1 0.00035 1 4 24 .. 181 201 .. 178 216 .. 0.85 4 ? -1.8 0.0 5.4 1.6e+04 3 15 .. 208 220 .. 206 229 .. 0.74 5 ? 6.1 0.2 0.014 40 4 32 .. 237 265 .. 234 269 .. 0.88 6 ? 2.5 0.0 0.22 6.3e+02 5 23 .. 266 284 .. 264 292 .. 0.87 7 ? 1.5 0.1 0.46 1.3e+03 3 19 .. 292 308 .. 290 320 .. 0.73 8 ? 3.3 0.1 0.12 3.4e+02 5 23 .. 322 340 .. 318 345 .. 0.89 9 ! 8.1 0.1 0.0032 9.3 3 23 .. 348 368 .. 346 373 .. 0.87 Alignments for each domain: == domain 1 score: 1.8 bits; conditional E-value: 0.35 0050624 3 kltCleCmrtfkssfsiwrh 22 + C C r+fk s + +h ENSP00000328515 124 PFPCGACGRSFKCSSDAAKH 143 57899*******99877666 PP == domain 2 score: 2.8 bits; conditional E-value: 0.16 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C +C + f s + rhq ENSP00000328515 153 YECSDCGKAFIHSSHVVRHQR 173 68*****************95 PP == domain 3 score: 11.0 bits; conditional E-value: 0.00035 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C eC + f sf++ rhq ENSP00000328515 181 YACAECGKAFGQSFNLLRHQR 201 68*****************95 PP == domain 4 score: -1.8 bits; conditional E-value: 5.4 0050624 3 kltCleCmrtfks 15 C +C + f ENSP00000328515 208 PYACADCGKAFGQ 220 5689***999975 PP == domain 5 score: 6.1 bits; conditional E-value: 0.014 0050624 4 ltCleCmrtfkssfsiwrhqvevhnqnsm 32 C eC + f s ++ rh+ h++n + ENSP00000328515 237 YACGECGKRFLHSSNVVRHRRTHHGENPY 265 57*********************999975 PP == domain 6 score: 2.5 bits; conditional E-value: 0.22 0050624 5 tCleCmrtfkssfsiwrhq 23 C eC + f s ++ +hq ENSP00000328515 266 ECRECGQAFSQSSNLLQHQ 284 6*************99999 PP == domain 7 score: 1.5 bits; conditional E-value: 0.46 0050624 3 kltCleCmrtfkssfsi 19 + C +C r f s + ENSP00000328515 292 PFACQDCGRAFSRSSFL 308 578********766444 PP == domain 8 score: 3.3 bits; conditional E-value: 0.12 0050624 5 tCleCmrtfkssfsiwrhq 23 C C r f++ ++rhq ENSP00000328515 322 QCGHCGRAFRALSGFFRHQ 340 799***************9 PP == domain 9 score: 8.1 bits; conditional E-value: 0.0032 0050624 3 kltCleCmrtfkssfsiwrhq 23 + C eC r f+ sf + +h+ ENSP00000328515 348 PFRCTECGRAFRLSFHLIQHR 368 678*************99996 PP >> ENSP00000379458 pep:known chromosome:NCBI36:19:62972837:62983796:1 gene:ENSG00000083828 transcript:ENST00000396154 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 2.5 0.1 0.21 6e+02 3 23 .. 149 169 .. 147 174 .. 0.84 2 ? 3.3 0.0 0.11 3.3e+02 4 23 .. 178 197 .. 175 202 .. 0.83 3 ? 3.0 0.0 0.15 4.2e+02 2 23 .. 204 225 .. 203 230 .. 0.88 4 ? 3.9 0.0 0.075 2.2e+02 4 22 .. 234 252 .. 231 260 .. 0.84 5 ! 8.5 0.1 0.0023 6.7 4 24 .. 262 282 .. 259 291 .. 0.86 6 ? 1.0 0.1 0.65 1.9e+03 4 23 .. 290 309 .. 287 320 .. 0.78 7 ? -2.1 0.0 6.9 2e+04 5 20 .. 318 333 .. 314 339 .. 0.73 8 ? 0.5 0.0 0.94 2.7e+03 4 22 .. 345 363 .. 342 369 .. 0.83 9 ! 8.5 0.1 0.0023 6.6 4 23 .. 373 392 .. 370 400 .. 0.87 Alignments for each domain: == domain 1 score: 2.5 bits; conditional E-value: 0.21 0050624 3 kltCleCmrtfkssfsiwrhq 23 C eC ++f s s+ + q ENSP00000379458 149 TYECSECGKSFHQSSSLLQRQ 169 578*********999987766 PP == domain 2 score: 3.3 bits; conditional E-value: 0.11 0050624 4 ltCleCmrtfkssfsiwrhq 23 C+eC + f s+ h+ ENSP00000379458 178 YECIECGKAFAEKSSLINHR 197 68********9999988875 PP == domain 3 score: 3.0 bits; conditional E-value: 0.15 0050624 2 kkltCleCmrtfkssfsiwrhq 23 k+ C eC ++f + s+ +h+ ENSP00000379458 204 KRYECNECGKSFAYTSSLIKHR 225 6789*********999999986 PP == domain 4 score: 3.9 bits; conditional E-value: 0.075 0050624 4 ltCleCmrtfkssfsiwrh 22 C eC r+f + s+ +h ENSP00000379458 234 YECSECGRSFAENSSLIKH 252 68*********99999988 PP == domain 5 score: 8.5 bits; conditional E-value: 0.0023 0050624 4 ltCleCmrtfkssfsiwrhqv 24 C+eC ++f+ s s+ +hq ENSP00000379458 262 YECVECGKSFRRSSSLLQHQR 282 68*****************94 PP == domain 6 score: 1.0 bits; conditional E-value: 0.65 0050624 4 ltCleCmrtfkssfsiwrhq 23 C eC ++f ++ +hq ENSP00000379458 290 YECSECGKSFSLRSNLIHHQ 309 679*****998887777776 PP == domain 7 score: -2.1 bits; conditional E-value: 6.9 0050624 5 tCleCmrtfkssfsiw 20 C +C ++f s+ ENSP00000379458 318 ECGQCGKSFSRKSSLI 333 6999999997666654 PP == domain 8 score: 0.5 bits; conditional E-value: 0.94 0050624 4 ltCleCmrtfkssfsiwrh 22 C +C ++f + s+ +h ENSP00000379458 345 YECSDCGKSFAENSSLIKH 363 679*******999999888 PP == domain 9 score: 8.5 bits; conditional E-value: 0.0023 0050624 4 ltCleCmrtfkssfsiwrhq 23 C++C ++f+ s s+ rhq ENSP00000379458 373 YECIDCGKSFRHSSSFRRHQ 392 68*****************9 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (41 nodes) Target sequences: 46591 (23540008 residues) Passed MSV filter: 2668 (0.0572643); expected 931.8 (0.02) Passed bias filter: 2668 (0.0572643); expected 931.8 (0.02) Passed Vit filter: 1342 (0.0288038); expected 46.6 (0.001) Passed Fwd filter: 936 (0.0200897); expected 0.5 (1e-05) Initial search space (Z): 46591 [actual number of targets] Domain search space (domZ): 16 [number of targets reported over threshold] # CPU time: 7.28u 0.06s 00:00:07.34 Elapsed: 00:00:01.90 # Mc/sec: 507.97 //