organism	ada.dat.aln.pwm.new	araC.dat.aln.pwm.new	arcA.dat.aln.pwm.new	argR2.dat.aln.pwm.new	argR.dat.aln.pwm.new	carP.dat.aln.pwm.new	cpxR.dat.aln.pwm.new	crp.dat.aln.pwm.new	cspA.dat.aln.pwm.new	cynR.dat.aln.pwm.new	cysB.dat.aln.pwm.new	cytR.dat.aln.pwm.new	deoR.dat.aln.pwm.new	dnaA.dat.aln.pwm.new	fadR.dat.aln.pwm.new	farR.dat.aln.pwm.new	fhlA.dat.aln.pwm.new	fis.dat.aln.pwm.new	flhCD.dat.aln.pwm.new	fnr.dat.aln.pwm.new	fruR.dat.aln.pwm.new	fur.dat.aln.pwm.new	galR.dat.aln.pwm.new	gcvA.dat.aln.pwm.new	glpR.dat.aln.pwm.new	hipB.dat.aln.pwm.new	hns.dat.aln.pwm.new	hu.dat.aln.pwm.new	iclR.dat.aln.pwm.new	ihf.dat.aln.pwm.new	ilvY.dat.aln.pwm.new	lacI.dat.aln.pwm.new	lexA.dat.aln.pwm.new	lrp.dat.aln.pwm.new	malT.dat.aln.pwm.new	marR.dat.aln.pwm.new	melR.dat.aln.pwm.new	metJ3.dat.aln.pwm.new	metJ.dat.aln.pwm.new	metR.dat.aln.pwm.new	modE.dat.aln.pwm.new	nagC.dat.aln.pwm.new	narL.dat.aln.pwm.new	narP.dat.aln.pwm.new	ntrC.dat.aln.pwm.new	ompR.dat.aln.pwm.new	oxyR.dat.aln.pwm.new	pdhR.dat.aln.pwm.new	phoB3.dat.aln.pwm.new	phoB.dat.aln.pwm.new	purR.dat.aln.pwm.new	rhaS.dat.aln.pwm.new	rpoD15.dat.aln.pwm.new	rpoD16.dat.aln.pwm.new	rpoD17.dat.aln.pwm.new	rpoD18.dat.aln.pwm.new	rpoD19.dat.aln.pwm.new	rpoE.dat.aln.pwm.new	rpoH2.dat.aln.pwm.new	rpoH3.dat.aln.pwm.new	rpoN.dat.aln.pwm.new	rpoS17.dat.aln.pwm.new	rpoS18.dat.aln.pwm.new	soxS.dat.aln.pwm.new	torR.dat.aln.pwm.new	trpR.dat.aln.pwm.new	tus.dat.aln.pwm.new	tyrR.dat.aln.pwm.new
AP008232.1.mfa	0.771411	0.721812	0.930826	0.893999	0.911769	0.804878	0.952874	0.92108	0.909091	0.864865	0.76652	0.895842	0.797051	0.912533	0.809955	1	0.769559	0.801116	0.732206	0.824081	0.881612	0.872376	0.930534	0.807406	0.830352	0.743515	0.955022	0.890023	0.864865	0.800705	0.787234	0.782168	0.856286	0.892086	0.980815	0.769231	0.722222	0.771054	0.874801	0.943049	0.731633	0.827895	0.873225	0.841032	0.876086	0.86347	0.773113	0.939394	0.75113	0.805767	0.855658	0.652174	0.766866	0.827339	0.830709	0.855235	0.774815	0.670283	0.774636	0.836203	0.910618	0.835297	0.815503	0.810518	0.954673	0.867267	0.739179	0.851538
AE009952.1.mfa	0.801822	0.698257	0.938542	0.737089	0.863627	0.853658	1	0.89565	0.909091	0.891892	0.819149	0.910872	0.852235	0.922177	0.846545	0.975099	0.786227	0.84227	0.744706	0.896685	0.931906	0.971057	0.948851	0.911066	0.864787	0.745238	0.974717	0.868172	0.891892	0.820504	0.808511	0.799434	0.817402	0.894286	1	0.75	0.777778	0.787395	0.893422	0.888876	0.741773	0.863988	0.966163	0.915128	0.89126	0.91253	0.75438	0.939394	0.885474	0.932319	0.905674	0.673913	0.810383	0.823175	0.843145	0.805459	0.859341	0.78032	0.798087	0.723347	0.852856	0.830281	0.824747	0.829368	0.909346	0.856037	0.755425	0.846125
AE013218.1.mfa	0.789915	0.679504	0.885498	0.735231	0.893799	0.756098	0.910668	0.829774	0.893939	0.918919	0.822627	0.879191	0.814837	0.887573	0.816044	1	0.757459	0.820406	0.647909	0.861659	0.80258	0.882873	0.830104	0.847382	0.768037	0.723943	0.948343	0.802619	0.891892	0.834318	0.829787	0.752366	0.767399	0.917533	0.892269	0.711539	0.777778	0.740039	0.826001	0.934006	0.704145	0.910972	0.797562	0.74045	0.767131	0.966951	0.712037	0.909091	0.791531	0.772871	0.780926	0.608696	0.838824	0.869383	0.859465	0.84013	0.900882	0.714342	0.740332	0.720477	0.813113	0.801825	0.797287	0.807449	0.886282	0.705044	0.768073	0.810625
BX950851.1.mfa	0.775212	0.723594	0.894059	0.860138	0.969257	0.853658	0.973279	0.903964	0.887879	0.891892	0.78437	0.895842	0.852235	0.934937	0.856274	1	0.79376	0.839026	0.768906	0.978726	0.930501	0.874367	0.899574	0.847093	0.838731	0.757381	0.982931	0.868894	0.918919	0.830082	0.808511	0.782168	0.782278	0.892936	0.961629	0.788462	0.777778	0.744467	0.88253	0.925717	0.782781	0.859418	0.938779	0.861376	0.866451	0.91942	0.73953	0.878788	0.911953	0.936275	0.873616	0.663044	0.877554	0.826807	0.841307	0.812385	0.846285	0.729551	0.806373	0.865717	0.908718	0.884601	0.804846	0.829737	0.954673	0.82824	0.741898	0.858801
CP000034.1.mfa	0.81373	0.736246	0.902901	0.89846	0.973036	1	0.954204	0.903851	0.939394	0.864865	0.794804	0.894506	0.814837	0.946138	0.919396	0.936478	0.935465	0.820817	0.757206	0.965084	0.946854	0.913048	0.928933	0.89634	0.899381	0.747462	0.982931	0.874357	0.891892	0.818022	0.829787	0.781615	0.930325	0.881022	0.980815	0.788462	0.722222	0.821236	0.865532	0.926367	0.945919	0.895511	0.928139	0.935364	0.967303	0.88503	0.730574	1	0.857911	0.880579	0.851028	0.673913	0.827574	0.844899	0.845169	0.804819	0.854742	0.714734	0.889313	0.91679	0.975914	0.864866	0.82497	0.83958	0.954673	0.850662	0.759914	0.815309
CP000243.1.mfa	0.828432	0.701029	0.903325	0.89846	0.973036	1	0.954647	0.96452	0.909091	0.864865	0.773476	0.956246	0.981605	0.968542	0.853652	1	0.935465	0.808018	0.748132	0.885773	0.942309	0.913048	0.99228	0.948822	0.81665	0.769886	0.954255	0.874357	0.918919	0.776937	0.851064	0.785793	0.899605	0.903354	0.961629	0.788462	0.722222	0.758326	0.869635	0.918203	0.97296	0.887332	0.951452	0.884991	0.846816	0.913827	0.756552	1	0.819533	0.857768	0.911547	0.739131	0.839212	0.839016	0.828513	0.804819	0.808022	0.738048	0.88517	0.91679	0.975914	0.867284	0.888912	0.835154	0.954673	0.875551	0.809122	0.933085
BX936398.1.mfa	0.802325	0.709254	0.938542	0.856734	0.920202	0.829268	0.915276	0.935495	0.909091	0.891892	0.819149	0.880812	0.796443	0.914092	0.837206	0.975099	0.79026	0.847586	0.726957	0.952644	0.954076	0.921231	0.865255	0.911066	0.87142	0.752504	0.951835	0.934447	0.891892	0.825239	0.87234	0.836488	0.817402	0.881803	0.980815	0.75	0.777778	0.787395	0.859934	0.935395	0.742221	0.863988	0.896398	0.903527	0.866451	0.91253	0.752831	0.939394	0.885474	0.932319	0.880388	0.673913	0.802525	0.862834	0.844751	0.843938	0.838542	0.714734	0.798087	0.723347	0.90721	0.874456	0.799315	0.824459	0.932009	0.856037	0.755425	0.853893
CP000026.1.mfa	0.805624	0.702847	0.915394	0.911578	0.919647	0.926829	0.973279	0.942303	0.893939	0.864865	0.780892	0.953289	0.870629	0.94555	0.905195	0.950198	0.903197	0.832854	0.736032	0.965084	0.966861	0.889625	0.98456	0.874614	0.843545	0.778677	0.964304	0.847043	0.864865	0.831972	0.829787	0.865737	0.987692	0.892704	0.961629	0.961539	0.722222	0.786876	0.846632	0.90692	0.86435	0.972816	0.934569	0.960365	0.866451	0.887137	0.727973	0.909091	0.726414	0.860752	0.904748	0.663044	0.827353	0.841837	0.823125	0.834923	0.910573	0.869612	0.824144	0.892377	0.948304	0.844719	0.828491	0.820418	0.954673	0.875551	0.739179	0.824814
BX470251.1.mfa	0.836035	0.723159	0.902421	0.845748	0.922354	0.878049	1	0.860343	0.887879	0.891892	0.791326	0.910872	0.852235	0.978185	0.952245	1	0.822528	0.839109	0.745106	0.939707	0.921793	0.914056	0.874528	0.885477	0.853936	0.748556	0.972518	0.890745	0.918919	0.788358	0.87234	0.752366	0.848642	0.888206	0.95831	0.73077	0.777778	0.760119	0.832603	1	0.786162	0.895511	0.907603	0.826192	0.851277	0.935444	0.771368	0.909091	0.796389	0.859996	0.88874	0.695652	0.840813	0.851105	0.827959	0.806186	0.840592	0.762147	0.702783	0.760495	0.913952	0.839195	0.837734	0.828987	0.886282	0.805818	0.772108	0.884727
BA000021.3.mfa	0.789915	0.690027	0.924256	0.757532	0.859905	0.780488	0.881217	0.795844	0.939394	0.864865	0.798281	0.877855	0.889633	0.854556	0.829448	1	0.813927	0.824924	0.647909	0.836182	0.799025	0.919887	0.763659	0.885477	0.813122	0.732733	0.962683	0.825193	0.864865	0.834896	0.87234	0.735099	0.759811	0.930093	0.873083	0.788462	0.722222	0.744397	0.805675	0.962496	0.727806	0.883788	0.810315	0.721217	0.71152	0.907184	0.719248	0.909091	0.764917	0.791814	0.744691	0.630435	0.872115	0.862015	0.851484	0.838667	0.89185	0.72066	0.691009	0.670815	0.820826	0.843994	0.785425	0.834947	0.886682	0.767268	0.762544	0.833681
AE006468.1.mfa	0.763305	0.721343	0.930165	0.911578	0.960574	0.926829	0.940825	0.870032	0.893939	0.864865	0.794343	0.953289	0.814837	0.94555	0.842304	0.975099	0.903197	0.832854	0.736032	0.965084	0.902538	0.913048	0.98456	0.840044	0.929303	0.799576	0.962248	0.846321	0.837838	0.817209	0.829787	0.798329	0.898096	0.881018	1	0.865385	0.777778	0.806035	0.846632	0.898756	0.891838	0.860276	0.951452	0.888726	0.88141	0.903814	0.784011	0.909091	0.902774	0.928368	0.846024	0.695652	0.800995	0.809711	0.844798	0.805519	0.807678	0.737656	0.819601	0.892377	0.948304	0.854337	0.801032	0.819706	0.932009	0.940464	0.945568	0.942113
U00096.2.mfa	0.786617	0.736246	0.913607	0.89846	0.973036	1	0.956056	0.895218	0.909091	1	0.756546	0.908725	0.797051	0.966983	0.873587	1	0.826561	0.808018	0.708808	0.965084	0.870657	0.913048	0.99228	0.821505	0.898406	0.763517	0.982931	0.890023	0.891892	0.770878	0.829787	0.782168	0.930325	0.896206	1	0.807693	0.722222	0.764207	0.887392	0.918386	0.97296	0.887332	0.951452	0.884991	0.846816	0.913827	0.765278	1	0.902774	0.928368	0.86775	0.673913	0.827574	0.830562	0.828513	0.810006	0.830654	0.738048	0.88517	0.912955	0.924218	0.842827	0.829873	0.825031	1	0.875551	0.828566	0.933085
CP000036.1.mfa	0.81373	0.736246	0.903863	0.88904	0.973036	1	0.973279	0.900655	0.872727	0.864865	0.752608	0.908725	0.796443	0.946138	0.823485	0.940237	0.826561	0.810917	0.745107	0.965084	0.966861	0.953955	0.937973	0.89634	0.85358	0.757778	0.982931	0.868894	0.891892	0.78084	0.829787	0.781615	0.876848	0.889293	1	1	0.722222	0.763424	0.887392	0.980553	0.918431	0.887332	0.951452	0.963565	0.846816	0.949025	0.765278	1	0.902774	0.928368	0.899719	0.663044	0.827574	0.803386	0.842817	0.823197	0.830654	0.738048	0.748075	0.91679	0.883684	0.867284	0.826593	0.837383	1	0.940464	0.967255	0.933085