organism	ada.dat.aln.pwm.new	araC.dat.aln.pwm.new	arcA.dat.aln.pwm.new	argR2.dat.aln.pwm.new	argR.dat.aln.pwm.new	carP.dat.aln.pwm.new	cpxR.dat.aln.pwm.new	crp.dat.aln.pwm.new	cspA.dat.aln.pwm.new	cynR.dat.aln.pwm.new	cysB.dat.aln.pwm.new	cytR.dat.aln.pwm.new	deoR.dat.aln.pwm.new	dnaA.dat.aln.pwm.new	fadR.dat.aln.pwm.new	farR.dat.aln.pwm.new	fhlA.dat.aln.pwm.new	fis.dat.aln.pwm.new	flhCD.dat.aln.pwm.new	fnr.dat.aln.pwm.new	fruR.dat.aln.pwm.new	fur.dat.aln.pwm.new	galR.dat.aln.pwm.new	gcvA.dat.aln.pwm.new	glpR.dat.aln.pwm.new	hipB.dat.aln.pwm.new	hns.dat.aln.pwm.new	hu.dat.aln.pwm.new	iclR.dat.aln.pwm.new	ihf.dat.aln.pwm.new	ilvY.dat.aln.pwm.new	lacI.dat.aln.pwm.new	lexA.dat.aln.pwm.new	lrp.dat.aln.pwm.new	malT.dat.aln.pwm.new	marR.dat.aln.pwm.new	melR.dat.aln.pwm.new	metJ3.dat.aln.pwm.new	metJ.dat.aln.pwm.new	metR.dat.aln.pwm.new	modE.dat.aln.pwm.new	nagC.dat.aln.pwm.new	narL.dat.aln.pwm.new	narP.dat.aln.pwm.new	ntrC.dat.aln.pwm.new	ompR.dat.aln.pwm.new	oxyR.dat.aln.pwm.new	pdhR.dat.aln.pwm.new	phoB3.dat.aln.pwm.new	phoB.dat.aln.pwm.new	purR.dat.aln.pwm.new	rhaS.dat.aln.pwm.new	rpoD15.dat.aln.pwm.new	rpoD16.dat.aln.pwm.new	rpoD17.dat.aln.pwm.new	rpoD18.dat.aln.pwm.new	rpoD19.dat.aln.pwm.new	rpoE.dat.aln.pwm.new	rpoH2.dat.aln.pwm.new	rpoH3.dat.aln.pwm.new	rpoN.dat.aln.pwm.new	rpoS17.dat.aln.pwm.new	rpoS18.dat.aln.pwm.new	soxS.dat.aln.pwm.new	torR.dat.aln.pwm.new	trpR.dat.aln.pwm.new	tus.dat.aln.pwm.new	tyrR.dat.aln.pwm.new
AP008232.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.630677	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.658845	0	0	0
AE009952.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.841194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.677308	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
AE013218.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.745911	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.377571	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.545127	0	0	0
BX950851.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.72101	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.677308	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.636582	0	0	0
CP000034.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.701577	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
CP000243.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.701577	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
BX936398.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.841194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.677308	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.636582	0	0	0
CP000026.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.779551	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
BX470251.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.841194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.683583	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
BA000021.3.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.656926	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.377571	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.477136	0	0	0
AE006468.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.720846	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
U00096.2.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.683583	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0
CP000036.1.mfa	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.879815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.679073	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.704573	0	0	0